View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_low_32 (Length: 267)
Name: NF14841_low_32
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 55103486 - 55103235
Alignment:
| Q |
1 |
catacatcaaaaatatcattgaatggaatgtaagaaattaccttggatcccaagagtcgaaagtttagtgctattgaagctgtaagttgttgccttttgg |
100 |
Q |
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| T |
55103486 |
catacatcaaaaatatcattgaatggaatgtaagaaattaccttggatcccaagagtcgaaagtttagtgctattgaagctgtaagttgttgccttttgg |
55103387 |
T |
|
| Q |
101 |
ttaaaaccaggatgttgaacgagcacgttccagttagagtagtttctattgaagttgtagttagaaattgtaagcttgaccctccattgattcatataat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
55103386 |
ttaaaaccaggatgttgaacgagcacgttccagttagagtagtttctattgaagttgtagttagaaattgtaagcttgatcctccattgattcatataat |
55103287 |
T |
|
| Q |
201 |
tgttcttgaaatgccaatggactcgaattggacacatgtggtcggtacattc |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
55103286 |
tgttcttgaaatgccaatggactcgaattggacacatgtggtcagtacattc |
55103235 |
T |
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