View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_low_6 (Length: 475)
Name: NF14841_low_6
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 449; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 1 - 461
Target Start/End: Original strand, 4223969 - 4224429
Alignment:
| Q |
1 |
ttatactagttagttgttcttctcggttctcgtcgactatataagtcttatgtatcccttgatgtaattcatattctctcattatcaggtgaaagagtta |
100 |
Q |
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| T |
4223969 |
ttatactagttagttgttcttctcggttctcgtcgactatataagtcttatgtatctcttgatgtaattcatattctctcattatcaggtgaaagagtta |
4224068 |
T |
|
| Q |
101 |
tattgatggagtttgttcgaatggtgaatttggaattttacttgcatgagaatcaagatggtggttcttcttcacttttggattggaacaagaggtttaa |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224069 |
tattgatggagtttgttcgaatggcgaatttggaattttacttgcatgagaatcaagatggtggttcttcttcacttttggattggaacaagaggtttaa |
4224168 |
T |
|
| Q |
201 |
gattgcagctggagtagctaaagggctacaatatcttcatgaagtggtagcaccaaatattgtacatggttgtgttaaatcttctaatgttcttattgat |
300 |
Q |
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| T |
4224169 |
gattgcagctggagtagctaaagggctacaatatcttcatgaagtggtagcaccaaatattgtacatggttgtgttaaatcttctaatgttcttattgat |
4224268 |
T |
|
| Q |
301 |
gttaatttttgtgctaaaatatctgattatggacttagttttttggggggtgtagaaaagagagggttagttggttatgtggatgatgaatattggaatg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224269 |
gttaatttttgtgctaaaatatctgattatggacttagttttttggggggtgtagaaaagagagggttagttggttatgtggatgatgaatattggaatg |
4224368 |
T |
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| Q |
401 |
aaggaattaggggtggtagagtttgtaaggaaaatgatgtttatgggttaggggtgatttt |
461 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224369 |
aaggaattaggggtggtagtgtttgtaaggaaaatgatgtttatgggttaggggtgatttt |
4224429 |
T |
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