View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_low_7 (Length: 435)
Name: NF14841_low_7
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 50 - 429
Target Start/End: Original strand, 26578311 - 26578690
Alignment:
| Q |
50 |
ttgatggaatatccaaagcatctttaatcccatcaaaggatttctagtggttggctcccaatatcattttttctcaataaaaatttgatatgaaactcct |
149 |
Q |
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| T |
26578311 |
ttgatggaatatccaaagcatctttaatcccatcaaaggatttctagtggttggctcccaatatcattttttctcaataaaaatttgatatgaaactcct |
26578410 |
T |
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| Q |
150 |
tagaaaatttatttatcccaagagtggttgagtatctttcgttgtgtttgagggtcttgcctccaagatagctttacccttgttcttgtccaattaaann |
249 |
Q |
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| T |
26578411 |
taggaaatttatttatcccaagagtggttgagtttctttcgttgtgtttgagggtcttgcctccaagatagctttacctttgttcttgtccaattaattt |
26578510 |
T |
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| Q |
250 |
nnnnnattgtgtactaaggaaccaatgaagttaccagatgatactccaaatgtgcatttaactggattcatctttaaaccatatagcctcatactttttg |
349 |
Q |
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| T |
26578511 |
tttttattgtgtactaaggaaccaatgaagttaccagatgatactccaaatatgcatttagctggattcatctttaaaccatatagcctcatagtttttg |
26578610 |
T |
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| Q |
350 |
aaagttttctctagttccaacaaatggttttggaagggaatgtatttgaccattacatcatcaatatacacattcatctc |
429 |
Q |
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| T |
26578611 |
aaagtcttctctagttccaacaaatggttttggaagggaatgtatttgaccattacatcatcaatatacacattcatctc |
26578690 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 26578246 - 26578280
Alignment:
| Q |
19 |
aacttaatagtcttcaatagcattggaaaacttga |
53 |
Q |
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| T |
26578246 |
aacttaatagtcttcaatagcactggaaaacttga |
26578280 |
T |
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