View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14845_high_7 (Length: 281)
Name: NF14845_high_7
Description: NF14845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14845_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 7002404 - 7002665
Alignment:
| Q |
1 |
aaccaattaaaacacccttttcttcttcattttctcattcaccatgggaaccgaagttttgctaccacaagattgtttcattcaacggatcagagcaccg |
100 |
Q |
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| T |
7002404 |
aaccaattaaaacacccttttcttcttcattttctcattcaccatgggaaccgaagttttgctaccacaagattgtttcattcaacggatcagagcaccg |
7002503 |
T |
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| Q |
101 |
ccggcgagtttttaccggcgaaagccttacggaaattgccnnnnnnnnnnnnnnnnnngcagtaattattatggtgccacaaactccgggaggagtaacc |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |
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| T |
7002504 |
ccggcgagtttttaccgccgaaagccttacggaaattgcc---ataataataataatagcagtcattattatggtgccacaaactccgggaggagtaacc |
7002600 |
T |
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| Q |
201 |
ggaaaccggtgactcgaccggagcaaagaaaacgtattccgccgacggagagaagacatagcaac |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7002601 |
ggaaaccggtgactcgaccggagcaaagaaaacgtattccgccgacggagagaagacatagcaac |
7002665 |
T |
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