View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14846_high_4 (Length: 247)

Name: NF14846_high_4
Description: NF14846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14846_high_4
NF14846_high_4
[»] chr4 (65 HSPs)
chr4 (22-165)||(38147545-38147688)
chr4 (23-81)||(49949339-49949397)
chr4 (26-87)||(7922251-7922312)
chr4 (40-87)||(7230279-7230326)
chr4 (25-87)||(11269693-11269756)
chr4 (40-87)||(21317353-21317400)
chr4 (22-92)||(24785458-24785529)
chr4 (22-92)||(24822737-24822808)
chr4 (26-87)||(19124622-19124684)
chr4 (40-85)||(46676513-46676558)
chr4 (29-86)||(50442751-50442808)
chr4 (23-87)||(56497605-56497670)
chr4 (28-87)||(6520070-6520130)
chr4 (38-86)||(8464088-8464136)
chr4 (35-87)||(10006339-10006391)
chr4 (35-87)||(21266892-21266944)
chr4 (24-87)||(32180829-32180893)
chr4 (43-87)||(48955291-48955335)
chr4 (35-87)||(52270040-52270092)
chr4 (40-87)||(2186348-2186395)
chr4 (35-86)||(6087747-6087798)
chr4 (24-86)||(19908692-19908755)
chr4 (40-87)||(20799409-20799456)
chr4 (42-85)||(22279537-22279580)
chr4 (23-86)||(27655731-27655794)
chr4 (40-87)||(29908055-29908102)
chr4 (40-87)||(36203235-36203282)
chr4 (40-87)||(42316839-42316886)
chr4 (40-87)||(49473644-49473691)
chr4 (40-87)||(50362154-50362201)
chr4 (29-87)||(51002286-51002345)
chr4 (40-87)||(54500568-54500615)
chr4 (42-93)||(56088090-56088141)
chr4 (22-87)||(7371544-7371610)
chr4 (40-86)||(20383488-20383534)
chr4 (40-86)||(31780745-31780791)
chr4 (40-86)||(34247440-34247486)
chr4 (40-86)||(38416057-38416103)
chr4 (23-92)||(52132299-52132369)
chr4 (40-85)||(6789441-6789486)
chr4 (42-87)||(10303528-10303573)
chr4 (40-85)||(11286796-11286841)
chr4 (40-85)||(11949778-11949823)
chr4 (42-87)||(12322672-12322717)
chr4 (24-81)||(12439669-12439726)
chr4 (26-86)||(14542760-14542821)
chr4 (23-87)||(23809948-23810013)
chr4 (40-85)||(31760247-31760292)
chr4 (23-87)||(43034339-43034404)
chr4 (40-81)||(43782320-43782361)
chr4 (29-86)||(51458678-51458735)
chr4 (40-81)||(56551607-56551648)
chr4 (23-86)||(3936627-3936691)
chr4 (27-87)||(7030895-7030955)
chr4 (22-81)||(11144661-11144721)
chr4 (47-87)||(14136090-14136130)
chr4 (43-87)||(14577525-14577569)
chr4 (42-86)||(19854565-19854609)
chr4 (35-87)||(20098765-20098817)
chr4 (24-87)||(24664989-24665053)
chr4 (35-87)||(30380529-30380581)
chr4 (24-87)||(35021465-35021529)
chr4 (39-83)||(41520957-41521001)
chr4 (39-87)||(55421583-55421631)
chr4 (42-86)||(55924804-55924848)
[»] chr7 (55 HSPs)
chr7 (26-87)||(32566042-32566103)
chr7 (22-86)||(23069853-23069918)
chr7 (27-85)||(7481226-7481284)
chr7 (25-86)||(3533008-3533069)
chr7 (23-91)||(9522907-9522976)
chr7 (33-86)||(21050230-21050283)
chr7 (22-86)||(46987086-46987151)
chr7 (27-93)||(3953434-3953500)
chr7 (26-87)||(7872748-7872810)
chr7 (40-86)||(8615023-8615069)
chr7 (22-87)||(22690032-22690098)
chr7 (42-87)||(8683069-8683114)
chr7 (27-87)||(8879748-8879809)
chr7 (23-87)||(40762204-40762269)
chr7 (39-87)||(13044156-13044204)
chr7 (42-86)||(24991781-24991825)
chr7 (24-87)||(35142147-35142211)
chr7 (25-87)||(1120030-1120093)
chr7 (25-91)||(1627934-1628001)
chr7 (40-87)||(2618678-2618725)
chr7 (40-87)||(5352328-5352375)
chr7 (40-87)||(7791899-7791946)
chr7 (40-87)||(10244726-10244773)
chr7 (32-87)||(11780412-11780467)
chr7 (40-83)||(18714451-18714494)
chr7 (40-87)||(20521046-20521093)
chr7 (24-86)||(21105603-21105666)
chr7 (35-86)||(30296333-30296384)
chr7 (35-86)||(37864425-37864476)
chr7 (40-87)||(41029271-41029318)
chr7 (40-87)||(42435413-42435460)
chr7 (35-78)||(47442495-47442538)
chr7 (40-87)||(48007562-48007609)
chr7 (22-87)||(2916101-2916167)
chr7 (40-86)||(25888900-25888946)
chr7 (41-87)||(38088033-38088079)
chr7 (22-87)||(38553817-38553883)
chr7 (37-87)||(38911298-38911348)
chr7 (42-87)||(4340126-4340171)
chr7 (33-86)||(15913551-15913604)
chr7 (42-87)||(25246770-25246815)
chr7 (42-87)||(39801705-39801750)
chr7 (40-93)||(41527553-41527606)
chr7 (47-87)||(1398419-1398459)
chr7 (42-86)||(3196659-3196703)
chr7 (35-87)||(5458081-5458133)
chr7 (43-87)||(5584646-5584690)
chr7 (43-87)||(5589606-5589650)
chr7 (35-87)||(32263006-32263058)
chr7 (39-87)||(33254177-33254225)
chr7 (36-87)||(34807217-34807269)
chr7 (42-86)||(34885874-34885918)
chr7 (47-87)||(36803837-36803877)
chr7 (43-87)||(39926556-39926600)
chr7 (35-87)||(47342676-47342728)
[»] chr5 (50 HSPs)
chr5 (22-86)||(22498942-22499006)
chr5 (35-87)||(36321504-36321556)
chr5 (24-91)||(39914896-39914963)
chr5 (22-87)||(17338699-17338765)
chr5 (26-87)||(34206226-34206287)
chr5 (35-87)||(19248478-19248530)
chr5 (27-87)||(24485698-24485758)
chr5 (39-87)||(27679497-27679545)
chr5 (39-87)||(31308657-31308705)
chr5 (29-87)||(11844441-11844500)
chr5 (40-87)||(16133080-16133127)
chr5 (40-87)||(35109399-35109446)
chr5 (23-87)||(6489006-6489071)
chr5 (24-85)||(19068438-19068499)
chr5 (22-93)||(11017169-11017241)
chr5 (35-87)||(11647196-11647248)
chr5 (23-87)||(13220618-13220682)
chr5 (24-87)||(15889410-15889474)
chr5 (22-85)||(31159430-31159494)
chr5 (39-87)||(37614441-37614489)
chr5 (22-72)||(3222745-3222796)
chr5 (40-87)||(3445262-3445309)
chr5 (23-86)||(11720894-11720957)
chr5 (24-86)||(18489074-18489137)
chr5 (39-86)||(25796422-25796469)
chr5 (40-87)||(30893932-30893979)
chr5 (40-87)||(37932329-37932376)
chr5 (25-86)||(1642334-1642396)
chr5 (22-87)||(3198329-3198395)
chr5 (39-85)||(13409429-13409475)
chr5 (41-87)||(34436850-34436896)
chr5 (39-85)||(43108570-43108616)
chr5 (22-86)||(1476106-1476171)
chr5 (23-87)||(6624775-6624840)
chr5 (33-86)||(17861443-17861496)
chr5 (40-85)||(18391601-18391646)
chr5 (22-87)||(21316881-21316946)
chr5 (26-87)||(33645690-33645751)
chr5 (43-87)||(5485185-5485229)
chr5 (22-81)||(5846034-5846094)
chr5 (43-87)||(6375522-6375566)
chr5 (46-86)||(9123866-9123906)
chr5 (35-87)||(10032284-10032336)
chr5 (24-87)||(11637570-11637634)
chr5 (40-92)||(16701596-16701648)
chr5 (35-87)||(17210719-17210771)
chr5 (42-86)||(20927639-20927683)
chr5 (35-87)||(22297384-22297436)
chr5 (24-87)||(26409252-26409316)
chr5 (42-86)||(33906500-33906544)
[»] scaffold0896 (1 HSPs)
scaffold0896 (26-87)||(3140-3201)
[»] chr6 (35 HSPs)
chr6 (26-87)||(8810639-8810700)
chr6 (35-87)||(331896-331948)
chr6 (24-87)||(28046176-28046240)
chr6 (40-87)||(4450261-4450308)
chr6 (40-87)||(5040848-5040895)
chr6 (40-87)||(7081669-7081716)
chr6 (24-81)||(19554158-19554216)
chr6 (22-87)||(19581446-19581512)
chr6 (40-86)||(30960068-30960114)
chr6 (35-84)||(334142-334191)
chr6 (23-86)||(655746-655810)
chr6 (39-87)||(788865-788913)
chr6 (35-87)||(20744137-20744189)
chr6 (39-87)||(32053787-32053835)
chr6 (23-87)||(5655303-5655369)
chr6 (40-87)||(8381209-8381256)
chr6 (24-86)||(18254099-18254162)
chr6 (40-87)||(18256882-18256929)
chr6 (41-87)||(10780123-10780169)
chr6 (33-87)||(14679124-14679178)
chr6 (40-86)||(21936048-21936094)
chr6 (33-87)||(33938687-33938741)
chr6 (42-87)||(7083009-7083054)
chr6 (42-87)||(10118916-10118961)
chr6 (40-85)||(21847195-21847240)
chr6 (35-87)||(2262191-2262243)
chr6 (39-87)||(8217382-8217430)
chr6 (39-87)||(14441469-14441517)
chr6 (28-87)||(15291692-15291752)
chr6 (35-87)||(17151235-17151287)
chr6 (41-93)||(17382077-17382129)
chr6 (43-87)||(17829326-17829370)
chr6 (24-87)||(20568289-20568353)
chr6 (23-87)||(26320561-26320625)
chr6 (42-86)||(26522472-26522516)
[»] chr3 (64 HSPs)
chr3 (22-86)||(30200826-30200891)
chr3 (22-85)||(54230095-54230159)
chr3 (23-85)||(52119377-52119440)
chr3 (26-87)||(1149069-1149131)
chr3 (40-86)||(13042815-13042861)
chr3 (40-86)||(13050892-13050938)
chr3 (27-87)||(5702179-5702239)
chr3 (23-87)||(48376834-48376899)
chr3 (39-87)||(16980368-16980416)
chr3 (23-87)||(46469276-46469340)
chr3 (24-87)||(21914834-21914897)
chr3 (25-87)||(35191816-35191879)
chr3 (29-87)||(7868721-7868779)
chr3 (39-85)||(50570203-50570249)
chr3 (26-87)||(53207969-53208031)
chr3 (39-80)||(2662098-2662139)
chr3 (26-87)||(4216400-4216461)
chr3 (22-87)||(5186832-5186897)
chr3 (42-87)||(8113579-8113624)
chr3 (26-94)||(20370281-20370350)
chr3 (25-85)||(21914070-21914131)
chr3 (35-87)||(2078239-2078291)
chr3 (35-87)||(8127462-8127514)
chr3 (39-83)||(10926472-10926516)
chr3 (35-87)||(27185476-27185528)
chr3 (39-87)||(33223867-33223915)
chr3 (35-87)||(35392002-35392054)
chr3 (35-83)||(35863823-35863871)
chr3 (27-87)||(43777058-43777118)
chr3 (23-86)||(53996299-53996363)
chr3 (29-87)||(5117207-5117266)
chr3 (40-87)||(10498710-10498757)
chr3 (40-87)||(16792989-16793036)
chr3 (40-87)||(18870740-18870787)
chr3 (35-94)||(21245785-21245844)
chr3 (35-86)||(21513288-21513339)
chr3 (39-86)||(22843464-22843511)
chr3 (24-86)||(23147976-23148039)
chr3 (23-85)||(29631187-29631250)
chr3 (36-83)||(45254234-45254281)
chr3 (40-87)||(48315039-48315086)
chr3 (40-86)||(13800667-13800713)
chr3 (22-75)||(14741805-14741859)
chr3 (29-87)||(22462311-22462369)
chr3 (23-76)||(52089326-52089380)
chr3 (26-87)||(53681877-53681939)
chr3 (42-87)||(17588361-17588406)
chr3 (23-87)||(21506755-21506820)
chr3 (23-87)||(44579635-44579700)
chr3 (25-81)||(45096031-45096088)
chr3 (42-86)||(4402105-4402149)
chr3 (39-87)||(21331431-21331479)
chr3 (24-83)||(21549041-21549101)
chr3 (35-87)||(22486682-22486734)
chr3 (23-86)||(25441497-25441561)
chr3 (26-85)||(25505701-25505761)
chr3 (27-87)||(28595788-28595848)
chr3 (39-87)||(41258970-41259018)
chr3 (28-87)||(45309145-45309205)
chr3 (39-87)||(47377363-47377411)
chr3 (35-87)||(49600274-49600326)
chr3 (39-87)||(50037310-50037358)
chr3 (43-87)||(52904161-52904205)
chr3 (39-87)||(55126005-55126053)
[»] chr8 (48 HSPs)
chr8 (35-87)||(22847467-22847519)
chr8 (40-95)||(17704004-17704059)
chr8 (24-86)||(30623293-30623356)
chr8 (23-100)||(10152442-10152520)
chr8 (23-87)||(13286130-13286194)
chr8 (40-87)||(19778064-19778111)
chr8 (40-87)||(27191757-27191804)
chr8 (40-87)||(37015851-37015898)
chr8 (22-87)||(1244701-1244767)
chr8 (25-85)||(9019563-9019624)
chr8 (24-87)||(29376900-29376964)
chr8 (35-87)||(39821883-39821935)
chr8 (39-94)||(8717489-8717544)
chr8 (40-87)||(11708985-11709032)
chr8 (22-87)||(15310321-15310388)
chr8 (22-87)||(15490690-15490757)
chr8 (25-87)||(20469310-20469373)
chr8 (40-87)||(27587220-27587267)
chr8 (40-87)||(27750919-27750966)
chr8 (40-87)||(29186501-29186548)
chr8 (23-93)||(31466242-31466313)
chr8 (22-87)||(34997457-34997524)
chr8 (40-87)||(43962039-43962086)
chr8 (24-86)||(28219863-28219925)
chr8 (40-86)||(30427731-30427777)
chr8 (33-87)||(35682700-35682754)
chr8 (39-85)||(36018544-36018590)
chr8 (26-87)||(44293574-44293636)
chr8 (46-87)||(2666188-2666229)
chr8 (40-85)||(9656012-9656057)
chr8 (38-87)||(15079165-15079214)
chr8 (40-85)||(15438454-15438499)
chr8 (40-85)||(15529758-15529803)
chr8 (42-87)||(23816789-23816834)
chr8 (58-87)||(38204441-38204470)
chr8 (28-80)||(444130-444182)
chr8 (47-95)||(3889881-3889929)
chr8 (39-83)||(7679905-7679949)
chr8 (40-84)||(8442502-8442546)
chr8 (46-86)||(8910002-8910042)
chr8 (27-83)||(11771710-11771766)
chr8 (43-87)||(13477899-13477943)
chr8 (35-87)||(16081305-16081357)
chr8 (35-87)||(19488299-19488351)
chr8 (35-75)||(27571859-27571899)
chr8 (39-87)||(32878660-32878708)
chr8 (43-87)||(36781407-36781451)
chr8 (40-80)||(42208484-42208524)
[»] chr2 (64 HSPs)
chr2 (36-87)||(18231484-18231535)
chr2 (22-87)||(24393244-24393310)
chr2 (27-87)||(37320518-37320579)
chr2 (22-87)||(39761437-39761502)
chr2 (35-87)||(9383219-9383271)
chr2 (39-87)||(10156016-10156064)
chr2 (40-87)||(7206124-7206171)
chr2 (40-87)||(19179065-19179112)
chr2 (39-86)||(20120735-20120782)
chr2 (40-87)||(22608526-22608573)
chr2 (40-87)||(24593375-24593422)
chr2 (23-87)||(2256970-2257035)
chr2 (40-85)||(40099398-40099443)
chr2 (42-87)||(44496717-44496762)
chr2 (26-86)||(2687375-2687435)
chr2 (38-86)||(4897543-4897591)
chr2 (38-86)||(4944937-4944985)
chr2 (35-87)||(9842212-9842264)
chr2 (40-92)||(12124678-12124730)
chr2 (39-87)||(22523026-22523074)
chr2 (22-85)||(34903518-34903582)
chr2 (35-87)||(35727436-35727488)
chr2 (24-87)||(3197078-3197141)
chr2 (40-87)||(7413204-7413251)
chr2 (40-95)||(10332290-10332345)
chr2 (40-87)||(12124544-12124591)
chr2 (25-87)||(19156163-19156226)
chr2 (40-87)||(20565090-20565137)
chr2 (35-86)||(24520649-24520700)
chr2 (40-87)||(24548010-24548057)
chr2 (40-87)||(43117205-43117252)
chr2 (40-86)||(4056790-4056836)
chr2 (41-87)||(5676738-5676784)
chr2 (25-87)||(7302141-7302203)
chr2 (37-83)||(12303582-12303628)
chr2 (40-86)||(13000685-13000731)
chr2 (26-87)||(15654869-15654931)
chr2 (39-85)||(26133534-26133580)
chr2 (22-87)||(28771581-28771647)
chr2 (28-85)||(35685063-35685121)
chr2 (37-87)||(40967383-40967433)
chr2 (42-87)||(7029408-7029453)
chr2 (47-92)||(9459079-9459124)
chr2 (24-85)||(10991543-10991604)
chr2 (23-87)||(24592843-24592908)
chr2 (42-87)||(27934874-27934919)
chr2 (42-87)||(39068725-39068770)
chr2 (39-87)||(2429015-2429063)
chr2 (35-87)||(4122023-4122075)
chr2 (23-86)||(5028856-5028920)
chr2 (40-87)||(7052772-7052820)
chr2 (40-80)||(9686463-9686503)
chr2 (39-87)||(16877123-16877171)
chr2 (39-87)||(16989254-16989302)
chr2 (42-86)||(18324911-18324955)
chr2 (24-76)||(22267523-22267575)
chr2 (39-87)||(30243249-30243297)
chr2 (27-86)||(30762496-30762556)
chr2 (35-87)||(35372949-35373001)
chr2 (47-87)||(40896531-40896571)
chr2 (40-76)||(42200697-42200733)
chr2 (24-87)||(42475108-42475172)
chr2 (40-84)||(43826457-43826501)
chr2 (35-87)||(44926411-44926463)
[»] chr1 (52 HSPs)
chr1 (26-87)||(21400023-21400085)
chr1 (25-87)||(9872104-9872167)
chr1 (40-87)||(17283950-17283997)
chr1 (40-87)||(19620575-19620622)
chr1 (40-87)||(38448881-38448928)
chr1 (40-87)||(52441526-52441573)
chr1 (21-86)||(28039855-28039921)
chr1 (22-87)||(35473951-35474017)
chr1 (22-87)||(47528443-47528509)
chr1 (38-87)||(8148378-8148427)
chr1 (23-87)||(14520943-14521008)
chr1 (42-87)||(34733399-34733444)
chr1 (29-86)||(41926822-41926879)
chr1 (23-87)||(42045369-42045434)
chr1 (22-87)||(49875596-49875661)
chr1 (40-87)||(5907798-5907845)
chr1 (39-86)||(8253739-8253786)
chr1 (40-87)||(8269383-8269430)
chr1 (25-87)||(29233973-29234036)
chr1 (26-85)||(30548092-30548151)
chr1 (39-86)||(34808577-34808624)
chr1 (40-87)||(36371055-36371102)
chr1 (46-93)||(41677611-41677658)
chr1 (40-87)||(45140021-45140068)
chr1 (35-86)||(48100722-48100773)
chr1 (40-87)||(49183172-49183219)
chr1 (40-83)||(50638931-50638974)
chr1 (23-87)||(24752644-24752710)
chr1 (39-85)||(50263381-50263427)
chr1 (24-92)||(2613716-2613785)
chr1 (24-92)||(5280625-5280694)
chr1 (46-87)||(7925363-7925404)
chr1 (27-87)||(10132445-10132506)
chr1 (40-93)||(15803252-15803305)
chr1 (38-87)||(24978243-24978292)
chr1 (42-87)||(34632168-34632213)
chr1 (23-87)||(47719104-47719169)
chr1 (39-87)||(1091178-1091226)
chr1 (35-87)||(17396707-17396759)
chr1 (24-83)||(18056714-18056774)
chr1 (43-87)||(18166601-18166645)
chr1 (29-81)||(19533182-19533234)
chr1 (39-87)||(24124844-24124892)
chr1 (39-87)||(27533242-27533290)
chr1 (24-87)||(29506826-29506890)
chr1 (29-85)||(34142368-34142424)
chr1 (66-98)||(35605670-35605702)
chr1 (39-83)||(44678031-44678075)
chr1 (39-87)||(45197383-45197431)
chr1 (39-87)||(48681947-48681995)
chr1 (39-87)||(50849087-50849135)
chr1 (35-87)||(52267763-52267815)
[»] scaffold0238 (1 HSPs)
scaffold0238 (40-93)||(25382-25435)
[»] scaffold1149 (1 HSPs)
scaffold1149 (35-87)||(2331-2383)
[»] scaffold0118 (1 HSPs)
scaffold0118 (39-87)||(39997-40045)
[»] scaffold0043 (1 HSPs)
scaffold0043 (39-87)||(90475-90523)
[»] scaffold0154 (1 HSPs)
scaffold0154 (36-87)||(10768-10819)
[»] scaffold0126 (1 HSPs)
scaffold0126 (40-87)||(34903-34950)
[»] scaffold0044 (1 HSPs)
scaffold0044 (35-86)||(42344-42395)
[»] scaffold0026 (1 HSPs)
scaffold0026 (40-86)||(75325-75371)
[»] scaffold0117 (1 HSPs)
scaffold0117 (42-87)||(18292-18337)
[»] scaffold0983 (1 HSPs)
scaffold0983 (39-87)||(3329-3377)
[»] scaffold0005 (1 HSPs)
scaffold0005 (43-87)||(239806-239850)


Alignment Details
Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 38147545 - 38147688
Alignment:
Q  22 tccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggatatcctttagtttatttaaatgaaagagaa 121  Q
    |||| ||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  38147545 tccgaggttcgaacccgaaccttgcatatattataaattgtctttaccaactgagttaagctcgcgcggatatcctttagtttatttaaatgaaagagaa 38147644  T
Q  122 tgcctaagaaaaagaattatttagattagaaagaatgattggtt 165  Q
    ||  |||||||||||| |||||||||||||||||||||||||||    
T  38147645 tgtgtaagaaaaagaaatatttagattagaaagaatgattggtt 38147688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 49949397 - 49949339
Alignment:
Q  23 ccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    ||||| |||||||||| ||||||||||||||| | |||||| |||||||||||||||||    
T  49949397 ccgggattcgaacccagaccttgcatatattatgcattgtccttaccaactgagctaag 49949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 7922251 - 7922312
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||  | ||||||||||||| | ||||||||||||||||||| ||||||||||    
T  7922251 gggttcgaacccggatcttgcatatattatgcattgtctttaccaactgagataagctcacg 7922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 7230326 - 7230279
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  7230326 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 7230279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 11269756 - 11269693
Alignment:
Q  25 ggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| ||||||||||||||| | |||||| ||||||||| || ||||||||||    
T  11269756 ggggttcgaacccaagaccttgcatatattatgtattgtccttaccaactaagttaagctcacg 11269693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 21317353 - 21317400
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  21317353 accttgcatatattatgcattgtctctaccaactgagctaagctcacg 21317400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 24785458 - 24785529
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    |||||||||||||||| | |||||| |||||||| | |||||| |||||||||||||| |||||||| ||||    
T  24785458 tccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagcttagctcacggggat 24785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 24822808 - 24822737
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    |||||||||||||||| | |||||| |||||||| | |||||| |||||||||||||| |||||||| ||||    
T  24822808 tccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagcttagctcacggggat 24822737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 19124622 - 19124684
Alignment:
Q  26 gggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| || ||||||||||||||| | |||||||||| |||||||| ||||||||||    
T  19124622 gggttcgaacctcagaccttgcatatattatgtattgtctttatcaactgagttaagctcacg 19124684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 46676513 - 46676558
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||    
T  46676513 accttgcatatattatgcattgtccttaccaactgagctaagctca 46676558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 50442751 - 50442808
Alignment:
Q  29 ttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||| ||||||||||||||| | ||| ||  |||||||||||||||||||||    
T  50442751 ttcgaacccagaccttgcatatattatgcattatccctaccaactgagctaagctcac 50442808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 56497605 - 56497670
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| ||||||||| | ||||||||||||||| | |||||| ||||||| |||||||||||||||    
T  56497605 ccgggattcgaaccccagaccttgcatatattatgcattgtccttaccaattgagctaagctcacg 56497670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 6520130 - 6520070
Alignment:
Q  28 gttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| |||||||||||||||||| | ||||||||||| ||||||| |||| |||||    
T  6520130 gttcgaacctcaaaccttgcatatattatgcattgtctttactaactgagttaagatcacg 6520070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 8464088 - 8464136
Alignment:
Q  38 aaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||| ||||||||| | |||||| ||||||||||||||||||||||    
T  8464088 aaaccttacatatattatgtattgtccttaccaactgagctaagctcac 8464136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 10006391 - 10006339
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | |||||||||||||| ||| |||||||||||    
T  10006391 cccagaccttgcatatattatgcattgtctttaccaaatgacctaagctcacg 10006339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 21266892 - 21266944
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| ||||||||| | |||||||||| ||| |||||||||||||||    
T  21266892 cccaaaccttacatatattatgcattgtctttaacaattgagctaagctcacg 21266944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 32180893 - 32180829
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| | || |||||||| ||| | ||||||| ||||||||||||||||||||||    
T  32180893 cggggttcgaaccccagactttgcatattttatgcattgtctataccaactgagctaagctcacg 32180829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 48955335 - 48955291
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||    
T  48955335 ttgcatatattacgcattgtccttaccaactgagataagctcacg 48955291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 52270040 - 52270092
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  52270040 cccagaccttgcatatattatgcattgtccataccaactgagctaagctcacg 52270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 2186348 - 2186395
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  2186348 accttgcatatattatgcattgtccataccaactgagctaagctcacg 2186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 6087798 - 6087747
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||| ||||||||||||||| | ||| ||| |||||||||||||||||||||    
T  6087798 cccagaccttgcatatattatgcattatctataccaactgagctaagctcac 6087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 19908755 - 19908692
Alignment:
Q  24 cggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||| |  ||||||||||||||| | |||||| |||||||||||| |||||||||    
T  19908755 cggggttcgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 19908692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 20799409 - 20799456
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  20799409 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 20799456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 22279537 - 22279580
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||| | |||||| |||||||||||||||||||||    
T  22279537 cttgcatatattatgcattgtccttaccaactgagctaagctca 22279580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 27655794 - 27655731
Alignment:
Q  23 ccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||| ||||||||||||||| | ||||| | || ||||||| ||||| ||||    
T  27655794 ccggggttcgaacccagaccttgcatatattatgcattgtttctatcaactgaactaagttcac 27655731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 29908102 - 29908055
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||| ||||||||||    
T  29908102 accttgcatatattatgcattgtccttaccaactgagttaagctcacg 29908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 36203282 - 36203235
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| ||| |||||||||||||||||||    
T  36203282 accttgcatatattatgcattgtccttatcaactgagctaagctcacg 36203235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 42316839 - 42316886
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | | ||||||||||||||||| ||||||||||    
T  42316839 accttgcatatattatgcactgtctttaccaactgagttaagctcacg 42316886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 49473691 - 49473644
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||| ||||||||||||    
T  49473691 accttgcatatattatgcattgtccttaccaactgggctaagctcacg 49473644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 50362154 - 50362201
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  50362154 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 50362201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 51002345 - 51002286
Alignment:
Q  29 ttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| |||||||||||||| ||| | ||||||| ||||||||||| ||||||||||    
T  51002345 ttcgaacctcaaaccttgcatattttatgcattgtctataccaactgagttaagctcacg 51002286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 54500615 - 54500568
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||||    
T  54500615 accttacatatattatgcattgtctctaccaactgagctaagctcacg 54500568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 56088090 - 56088141
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    ||||||||||||| | |||||| ||||||| ||||||||||||||| |||||    
T  56088090 cttgcatatattatgtattgtccttaccaattgagctaagctcacgtggata 56088141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 7371544 - 7371610
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||   ||||||||||||||| | |||||| ||| |||||||| ||||||||||    
T  7371544 tccggggttcgaaccccggaccttgcatatattatgtattgtccttatcaactgagttaagctcacg 7371610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 20383534 - 20383488
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | ||||||  |||||||||||||||||||||    
T  20383534 accttgcatatattatgcattgtccataccaactgagctaagctcac 20383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 31780791 - 31780745
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||| ||| | |||||| ||||||||||||||||||||||    
T  31780791 accttgcatattttatgcattgtccttaccaactgagctaagctcac 31780745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 34247486 - 34247440
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | |||||| |||||||||||||||| |||||    
T  34247486 accttgcatatattatgcattgtccttaccaactgagctaaactcac 34247440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 38416103 - 38416057
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | ||| || ||||||||||||||||||||||    
T  38416103 accttgcatatattatgcattatccttaccaactgagctaagctcac 38416057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 52132299 - 52132369
Alignment:
Q  23 ccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    |||||||||||||| || ||||||||||||||| | ||||||   ||||||||||||| ||||||| ||||    
T  52132299 ccggggttcgaaccacagaccttgcatatattatgcattgtccaaaccaactgagctatgctcacgaggat 52132369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 6789441 - 6789486
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||| || | |||||| |||||||||||||||||||||    
T  6789441 accttgcatatactatgcattgtccttaccaactgagctaagctca 6789486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 10303528 - 10303573
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||| | |||||| |||||||||||||||||||||||    
T  10303528 cttgcatattttatgcattgtccttaccaactgagctaagctcacg 10303573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 11286796 - 11286841
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| | ||||||| |||||||||| |||||||||    
T  11286796 accttgcatatattatgcattgtctctaccaactgaactaagctca 11286841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 11949778 - 11949823
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||    
T  11949778 accttgcatatattatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 12322717 - 12322672
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | ||||||  ||||||||||||||||||||||    
T  12322717 cttgcatatattatgcattgtccgtaccaactgagctaagctcacg 12322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 12439726 - 12439669
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    |||||||| || || |||||||||||||||| | |||||| ||| |||||||||||||    
T  12439726 cggggttcaaatccgaaccttgcatatattatgcattgtccttatcaactgagctaag 12439669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 14542760 - 14542821
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||| | ||||||||||||||| | |||||| || |||||| ||||||||||||    
T  14542760 gggttcgaaccccagaccttgcatatattatgcattgtccttgccaactaagctaagctcac 14542821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 23810013 - 23809948
Alignment:
Q  23 ccggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| ||||||  |||||||||||||||| |  |||||  ||||||||||||||||||||||    
T  23810013 ccggggtttgaaccctgaaccttgcatatattatgctttgtccataccaactgagctaagctcacg 23809948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 31760292 - 31760247
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||   ||||||| ||||||||||||||||||||    
T  31760292 accttgcatatattatacattgtctataccaactgagctaagctca 31760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 43034339 - 43034404
Alignment:
Q  23 ccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| ||||| || ||||||||||||||| | ||||||  ||||||||||| ||||||||||    
T  43034339 ccggggtttgaacctcagaccttgcatatattatgcattgtccataccaactgagttaagctcacg 43034404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 43782320 - 43782361
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  43782320 accttgcatatattatgcattgtcattaccaactgagctaag 43782361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 51458735 - 51458678
Alignment:
Q  29 ttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||  ||||||||||| ||| | ||||||  |||||||||||||||||||||    
T  51458735 ttcgaacccggaccttgcatattttatgtattgtccataccaactgagctaagctcac 51458678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 56551607 - 56551648
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  56551607 accttgcatatattatgcattgtccttaccaactgagctaag 56551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 3936691 - 3936627
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||   ||||||||||||||| | |||||   |||||||||||||||||||||    
T  3936691 ccggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgagctaagctcac 3936627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 7030895 - 7030955
Alignment:
Q  27 ggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| ||  ||||||||||| ||| | ||||||| ||||||||||| ||||||||||    
T  7030895 ggttcgaatccggaccttgcatattttatgcattgtctataccaactgagttaagctcacg 7030955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 11144661 - 11144721
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    |||||||||| ||||| | ||||||||||||||| | |||||||||| |||||||| ||||    
T  11144661 tccggggttcaaaccccagaccttgcatatattatgcattgtctttatcaactgaggtaag 11144721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 14136130 - 14136090
Alignment:
Q  47 atatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| | |||||||||| |||||||||||||||||||    
T  14136130 atatattatgcattgtctttatcaactgagctaagctcacg 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 14577525 - 14577569
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | |||||| |||||||||||||||| ||||||    
T  14577525 ttgcatatattatgcattgtccttaccaactgagctaaactcacg 14577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 19854609 - 19854565
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||| | ||||||  |||||||||||||||||||||    
T  19854609 cttgcatatattatgcattgtccataccaactgagctaagctcac 19854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 20098765 - 20098817
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| |||||||||||| | ||||||| | ||||||||| ||||||||||    
T  20098765 cccaaacattgcatatattatgtattgtctctgccaactgagttaagctcacg 20098817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 24664989 - 24665053
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||   ||||||||||||||| | ||| ||  ||||||||||||||||||||||    
T  24664989 cggggttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaagctcacg 24665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 30380581 - 30380529
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||||||   |||||| |||||||||||| ||| ||||||    
T  30380581 cccaaaccttgcatatattatacattgtccttaccaactgagttaaactcacg 30380529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 35021465 - 35021529
Alignment:
Q  24 cggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||  |||||||||||| ||| | ||||||  || |||||||||||||||||||    
T  35021465 cggggttcgaaccccgaaccttgcatattttatgtattgtccatatcaactgagctaagctcacg 35021529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 41521001 - 41520957
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    |||||||||||||||| | ||||||| ||||||||||| ||||||    
T  41521001 aaccttgcatatattatgcattgtctctaccaactgagttaagct 41520957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 55421583 - 55421631
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||   |||||||||||||||||||||    
T  55421583 aaccttgcatatattatgcattgtccaaaccaactgagctaagctcacg 55421631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 55924804 - 55924848
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||| | |||||| ||||||| ||||||||||||||    
T  55924804 cttgcatatattatgtattgtccttaccaattgagctaagctcac 55924848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 32566042 - 32566103
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||    
T  32566042 gggttcgaacccaaaccttgcatatattatacactgtctttaccaactgagctaagctcacg 32566103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 23069853 - 23069918
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||||||||    
T  23069853 tccggggttcgaaccccataccttgcatatattatgtgttgtctttaccaactgagctaagctcac 23069918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 7481284 - 7481226
Alignment:
Q  27 ggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||| |||||||||| |||| | ||||||||||||||||||| ||||||||    
T  7481284 ggttcgaacccagaccttgcatacattatgtattgtctttaccaactgagttaagctca 7481226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 3533008 - 3533069
Alignment:
Q  25 ggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||| ||||||||||||||| | |||||| |||| ||||||||||| |||||    
T  3533008 ggggttcgaacccataccttgcatatattatgcattgtccttactaactgagctaaactcac 3533069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 9522976 - 9522907
Alignment:
Q  23 ccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcgga 91  Q
    ||||||||||||||| ||||||||||||||||| | |||||   |||||||||||||||| |||||||||    
T  9522976 ccggggttcgaaccccaaaccttgcatatattatgcattgttcataccaactgagctaagttcacgcgga 9522907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 21050230 - 21050283
Alignment:
Q  33 aacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||| ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  21050230 aacccagaccttgcatatattatgcattgtccttaccaactgagctaagctcac 21050283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 46987151 - 46987086
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||||   ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  46987151 tccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 3953500 - 3953434
Alignment:
Q  27 ggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    |||| |||||| |||||||||||||||| | ||||||  |||| ||||||||||||||||| |||||    
T  3953500 ggtttgaacccgaaccttgcatatattatgcattgtccataccgactgagctaagctcacgaggata 3953434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 7872748 - 7872810
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  7872748 gggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaagttcacg 7872810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 8615069 - 8615023
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  8615069 accttgcatatattatgcattgtccttaccaactgagctaagctcac 8615023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 22690032 - 22690098
Alignment:
Q  22 tccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| ||||||||||||||||| | ||| |  ||| |||||||||||||||||||    
T  22690032 tccggggttcgaaccccaaaccttgcatatattatgcattattcttagcaactgagctaagctcacg 22690098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 8683114 - 8683069
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||    
T  8683114 cttgcatatattatgcattgtctataccaactgagctaagctcacg 8683069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 8879748 - 8879809
Alignment:
Q  27 ggttcgaa-cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| ||| |||||||||||||||| | ||||||| ||||||||||| ||||||||||    
T  8879748 ggttcgaatcccgaaccttgcatatattatgcattgtctataccaactgagttaagctcacg 8879809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 40762204 - 40762269
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| |||||||||| | ||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  40762204 ccggagttcgaaccctataccttgcatatattatgcattgtccttaccatctgagctaagctcacg 40762269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 13044156 - 13044204
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| ||| | |||||| |||||||||||||||||||||||    
T  13044156 aaccttgcatattttatgcattgtccttaccaactgagctaagctcacg 13044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 24991825 - 24991781
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||    
T  24991825 cttgcatatattatgcattgtccttaccaactgagctaagctcac 24991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 35142147 - 35142211
Alignment:
Q  24 cggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| ||||| |||||||||||| | ||||||  || |||||||||||||||||||    
T  35142147 cggggttcgaacctcaaactttgcatatattatgcattgtccatatcaactgagctaagctcacg 35142211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 1120030 - 1120093
Alignment:
Q  25 ggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||||| || ||||||||| | |||||| | |||||||||||||||||||||    
T  1120030 ggggttcgaacaccaaactttacatatattatgtattgtcctcaccaactgagctaagctcacg 1120093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 1627934 - 1628001
Alignment:
Q  25 ggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcgga 91  Q
    ||||||||||| ||| ||||||||||||| | | ||||||||| ||||||||| ||||||||| ||||    
T  1627934 ggggttcgaactccagaccttgcatatatcatgcattgtctttgccaactgagttaagctcacacgga 1628001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 2618725 - 2618678
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| ||||||||||||| |||||||||    
T  2618725 accttgcatatattatgcattgtccttaccaactgagcgaagctcacg 2618678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 5352375 - 5352328
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| |||||||| | |||||| |||||||||||||||||||||||    
T  5352375 accttgtatatattatgtattgtccttaccaactgagctaagctcacg 5352328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 7791946 - 7791899
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  7791946 accttgcatatattacgcattgtccaaaccaactgagctaagctcacg 7791899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 10244773 - 10244726
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  10244773 accttgcatatattatgcattgtccataccaactgagctaagctcacg 10244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 11780467 - 11780412
Alignment:
Q  32 gaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||||||||| | |||| || |||||||| ||||||| |||||    
T  11780467 gaacccaaaccttgcatatattatgcattgcctctaccaactaagctaagatcacg 11780412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 18714494 - 18714451
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    ||||||||||||||| | |||||| |||||||||||||||||||    
T  18714494 accttgcatatattatgcattgtccttaccaactgagctaagct 18714451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 20521046 - 20521093
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||||    
T  20521046 accttgcatacattatggattgtccttaccaactgagctaagctcacg 20521093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 21105666 - 21105603
Alignment:
Q  24 cggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||| | |||||||||||||||| | ||| ||  |||||||||||||||||||||    
T  21105666 cggggttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaagctcac 21105603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 30296384 - 30296333
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||| |||||||||||||||   |||||| ||||||||||||||||||||||    
T  30296384 cccagaccttgcatatattatacattgtccttaccaactgagctaagctcac 30296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 37864476 - 37864425
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||| ||||||||||||||| | |||||  ||||||||||||||||||||||    
T  37864476 cccagaccttgcatatattatgcattgtacttaccaactgagctaagctcac 37864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 41029318 - 41029271
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||   |||||| |||||||||||||||||||||||    
T  41029318 accttgcatatattatacattgtccttaccaactgagctaagctcacg 41029271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 42435413 - 42435460
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | || |||| ||||||||||||||||||||||    
T  42435413 accttgcatatattatgcatagtctctaccaactgagctaagctcacg 42435460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 47442538 - 47442495
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagct 78  Q
    |||||||||||||||||||| | |||||| ||||||||||||||    
T  47442538 cccaaaccttgcatatattatgtattgtccttaccaactgagct 47442495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 48007562 - 48007609
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||| ||||||||||    
T  48007562 accttgcatatattatgcattgtcattaccaactgagttaagctcacg 48007609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 2916167 - 2916101
Alignment:
Q  22 tccggggttcgaa-cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| |||| ||||||||||||||| | ||||||  ||||||||||| |||| |||||    
T  2916167 tccggggttcgaatcccagaccttgcatatattatgcattgtccgtaccaactgagttaaggtcacg 2916101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 25888946 - 25888900
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||||    
T  25888946 accttgcatatattatgcatcgtccttaccaactgagctaagctcac 25888900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 38088033 - 38088079
Alignment:
Q  41 ccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| |  ||||| |||||||||||||||||||||||    
T  38088033 ccttgcatatattatgttttgtccttaccaactgagctaagctcacg 38088079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 38553883 - 38553817
Alignment:
Q  22 tccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||| ||||||| ||||||||| | |||||  ||||||||||||||||| |||||    
T  38553883 tccgaggttcgaaccccaaaccttacatatattatgcattgttcttaccaactgagctaagttcacg 38553817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 38911348 - 38911298
Alignment:
Q  37 caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||||   |||||||||| |||||||| ||||||||||    
T  38911348 caaaccttgcatatattatacattgtctttatcaactgagttaagctcacg 38911298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 4340171 - 4340126
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||| |||||||||||||||| ||||||    
T  4340171 cttgcatatattatgcattgtccttaccaactgagctaatctcacg 4340126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 15913604 - 15913551
Alignment:
Q  33 aacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||||||||| | ||||||| || |||||||| ||| |||||    
T  15913604 aacccaaaccttgcatatattatgcattgtctctagcaactgagttaatctcac 15913551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 25246815 - 25246770
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||||||| |||||||||||| ||||||    
T  25246815 cttgcatatattatgcattgtctttatcaactgagctaaactcacg 25246770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 39801750 - 39801705
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | ||||||  ||||||||||||||||||||||    
T  39801750 cttgcatatattatgcattgtccataccaactgagctaagctcacg 39801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 41527606 - 41527553
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    ||||||||||||||| | ||||||  |||||||| ||||||||||||| |||||    
T  41527606 accttgcatatattatgcattgtccataccaactaagctaagctcacgaggata 41527553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 1398419 - 1398459
Alignment:
Q  47 atatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| | |||||| |||||||||||||||||||||||    
T  1398419 atatattatgcattgtccttaccaactgagctaagctcacg 1398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 3196659 - 3196703
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||   ||||||||||||||||||||||| |||||    
T  3196659 cttgcatatattatacattgtctttaccaactgagctaaactcac 3196703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 5458081 - 5458133
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | |||||  ||| |||||||||||||||||||    
T  5458081 cccagaccttgcatatattatgcattgttcttatcaactgagctaagctcacg 5458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 5584690 - 5584646
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||| |||||||||| |||||||||||||||    
T  5584690 ttgcatatattatgtattatctttaccaattgagctaagctcacg 5584646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 5589650 - 5589606
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||| |||||||||| |||||||||||||||    
T  5589650 ttgcatatattatgtattatctttaccaattgagctaagctcacg 5589606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 32263058 - 32263006
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| ||| ||||||||   ||||||| ||||||||||||||||||||||    
T  32263058 cccaaactttgtatatattatacattgtctataccaactgagctaagctcacg 32263006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 33254225 - 33254177
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| ||||||  ||||| ||||||||||||||||| ||||||    
T  33254225 aaccttgcatgtattacacattgtttttaccaactgagctaaactcacg 33254177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 34807269 - 34807217
Alignment:
Q  36 ccaaaccttgcatatattacgaattg-tctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||| ||||||    
T  34807269 ccaaaccttgcatatattatgcattgttctttatcaactgagctaaactcacg 34807217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 34885918 - 34885874
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||| | | |||||||| ||||||||||||||||||||    
T  34885918 cttgcatatatcatgcattgtcttcaccaactgagctaagctcac 34885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 36803877 - 36803837
Alignment:
Q  47 atatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| | ||||||| ||||||||||||||||||||||    
T  36803877 atatattatgcattgtctctaccaactgagctaagctcacg 36803837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 39926556 - 39926600
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | |||||| ||| |||||||||||||||||||    
T  39926556 ttgcatatattatgcattgtccttatcaactgagctaagctcacg 39926600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 47342728 - 47342676
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| ||| | ||||||  |||||||||||||||| |||||    
T  47342728 cccaaaccttgcatattttatgcattgtccataccaactgagctaagttcacg 47342676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 22499006 - 22498942
Alignment:
Q  22 tccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||||| ||||||||||||||| | |||||| |||||||||||| |||||||||    
T  22499006 tccggggttcgaacccagaccttgcatatattatgcattgtccttaccaactgagttaagctcac 22498942  T

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Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 36321504 - 36321556
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  36321504 cccaaaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 36321556  T

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Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 39914963 - 39914896
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcgga 91  Q
    ||||||||||||||  ||||||||||||||| | |||||| ||||||| |||| ||||||||||||||    
T  39914963 cggggttcgaacccggaccttgcatatattatgcattgtccttaccaattgagttaagctcacgcgga 39914896  T

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Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 17338699 - 17338765
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||  || ||||||||||||||| | |||||||||||||| |||||||||||||||    
T  17338699 tccggggttcgaacgacacaccttgcatatattatgtattgtctttaccaattgagctaagctcacg 17338765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 34206287 - 34206226
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| ||| |||||||||||||||| | ||||||||||||||||||| ||| ||||||    
T  34206287 gggttcgaccccgaaccttgcatatattatgcattgtctttaccaactgagttaaactcacg 34206226  T

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Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 19248530 - 19248478
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| |||||||||||| | ||||||| ||||||||||||||||||||||    
T  19248530 cccaaacattgcatatattatgcattgtctataccaactgagctaagctcacg 19248478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 24485758 - 24485698
Alignment:
Q  27 ggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||||||||||||||| | ||||||  |||||||| |||||||||||||    
T  24485758 ggttcgaacccgaaccttgcatatattatgcattgtccataccaactaagctaagctcacg 24485698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 27679545 - 27679497
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  27679545 aaccttgcatatattatgcattatctttaccaactgagctaagctcacg 27679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 31308657 - 31308705
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||    
T  31308657 aaccttgcatatattatatattgtctttaccaactgagctaagctcacg 31308705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 11844441 - 11844500
Alignment:
Q  29 ttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  11844441 ttcgaaccctaaaccttgcatatattatgcattgtccttaccaactgagctaagttcacg 11844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 16133080 - 16133127
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  16133080 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 16133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 35109446 - 35109399
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  35109446 accttgcatatattatgtattgtctttaccaactgagttaagctcacg 35109399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 6489071 - 6489006
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| |||||| | ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  6489071 ccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 6489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 19068438 - 19068499
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||| |||||| |||||||||||||||| | ||| ||  ||||||||||||||||||||    
T  19068438 cggggtttgaaccccaaccttgcatatattatgcattatccataccaactgagctaagctca 19068499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 11017241 - 11017169
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    |||||| |||||||| || ||||||||||||||| | ||| ||  ||||||||||||||| ||||||||||||    
T  11017241 tccgggattcgaacctcagaccttgcatatattatgcattatccctaccaactgagctaaactcacgcggata 11017169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 11647248 - 11647196
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||| | |||||| |||||||||||| |||| |||||    
T  11647248 cccaaaccttgcatatattatgcattgtccttaccaactgagttaagttcacg 11647196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 13220618 - 13220682
Alignment:
Q  23 ccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| |||||| ||| |||| ||||||| | || ||| |||||||||||||||||||||||    
T  13220618 ccggggtttgaacccgaactttgcgtatattatgcatcgtccttaccaactgagctaagctcacg 13220682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 15889474 - 15889410
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| |||||| | ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  15889474 cggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 15889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 31159494 - 31159430
Alignment:
Q  22 tccggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||||  || ||||||||||||| | |||||||||| |||||||| ||||||||    
T  31159494 tccggggttcgaaccctgaatcttgcatatattatgtattgtctttatcaactgagttaagctca 31159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 37614441 - 37614489
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||||||    
T  37614441 aaccttgcatatattatgcgttgtctctaccaactgagctaagctcacg 37614489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 3222796 - 3222745
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaac 72  Q
    ||||||||||||||| || ||||||||||||||| | |||||||||||||||    
T  3222796 tccggggttcgaacctcagaccttgcatatattatgtattgtctttaccaac 3222745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 3445262 - 3445309
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||||    
T  3445262 accttgcatacattatgcattgtccttaccaactgagctaagctcacg 3445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 11720957 - 11720894
Alignment:
Q  23 ccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||| ||||||  ||||||||||||||| | ||||||  ||||||||||| |||||||||    
T  11720957 ccggggtttgaaccccgaccttgcatatattatgcattgtccctaccaactgagttaagctcac 11720894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 18489074 - 18489137
Alignment:
Q  24 cggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||| ||| ||| ||||||||||||||| | ||||||| ||||||||||||||| |||||    
T  18489074 cggggttcaaactccagaccttgcatatattatgcattgtctataccaactgagctaaactcac 18489137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 25796422 - 25796469
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||| |||| | |||||| ||||||||||||||||||||||    
T  25796422 aaccttgcatacattatggattgtccttaccaactgagctaagctcac 25796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 30893979 - 30893932
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||||||||    
T  30893979 accttgcatatattatgcattgtctttacaaactgagttaagctcacg 30893932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 37932376 - 37932329
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  37932376 accttgcatatattatgcattgtccataccaactgagctaagctcacg 37932329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 1642396 - 1642334
Alignment:
Q  25 ggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||| ||| | ||||||||||||| | ||||| |||||||||||||||| ||||||    
T  1642396 ggggttcgaactccagatcttgcatatattatgcattgtttttaccaactgagctatgctcac 1642334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 3198395 - 3198329
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| ||| || ||||||||||| | | ||||  ||||||||||||||||||||||    
T  3198395 tccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaactgagctaagctcacg 3198329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 13409475 - 13409429
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||| | ||||||||||| ||||||||||| ||||    
T  13409475 aaccttgcatatattatgcattgtctttactaactgagctaaactca 13409429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 34436896 - 34436850
Alignment:
Q  41 ccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| | ||||||  ||||||||||||||||||||||    
T  34436896 ccttgcatatattatgcattgtccctaccaactgagctaagctcacg 34436850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 43108616 - 43108570
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||    
T  43108616 aaccttgcatatattatgcattgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 1476106 - 1476171
Alignment:
Q  22 tccggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||| |||||||||  |||||||||||||||| ||||| | |||||||||| || |||||||||    
T  1476106 tccgggattcgaaccctgaaccttgcatatattatgaattatttttaccaactaagttaagctcac 1476171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 6624840 - 6624775
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||   ||||||||||||||| | ||||||  | ||||||||||||||||||||    
T  6624840 ccggggttcgaaccccggaccttgcatatattatgcattgtccatgccaactgagctaagctcacg 6624775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 17861443 - 17861496
Alignment:
Q  33 aacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||| || |||||||||   |||||||||||||||| ||||||||||||    
T  17861443 aacccaaactttacatatattatacattgtctttaccaactaagctaagctcac 17861496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 18391646 - 18391601
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||| ||| | |||||| |||||||||||||||||||||    
T  18391646 accttgcatattttatgcattgtccttaccaactgagctaagctca 18391601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 21316946 - 21316881
Alignment:
Q  22 tccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||||||  ||||| ||||||||| | |||||| |||||||||||| ||| ||||||    
T  21316946 tccggggtttgaacccggacctttcatatattatgcattgtccttaccaactgagttaaactcacg 21316881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 33645690 - 33645751
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||  |||||||||||||||   ||||||  ||||||||||| ||||||||||    
T  33645690 gggttcgaaccccgaccttgcatatattatacattgtccataccaactgagttaagctcacg 33645751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 5485229 - 5485185
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||||||  ||||||||||||||||||||||    
T  5485229 ttgcatatattatgcattgtccctaccaactgagctaagctcacg 5485185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 5846094 - 5846034
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    ||||||||| |||||| | || |||||||||||| | |||||| |||||||||||||||||    
T  5846094 tccggggtttgaaccccagactttgcatatattatgcattgtccttaccaactgagctaag 5846034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 6375566 - 6375522
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| ||| | |||||| |||||||||||||||||||||||    
T  6375566 ttgcatattttatgtattgtccttaccaactgagctaagctcacg 6375522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 9123866 - 9123906
Alignment:
Q  46 catatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||| | ||||||||||||||||||| |||||||||    
T  9123866 catatattatgcattgtctttaccaactgagttaagctcac 9123906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 10032284 - 10032336
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| ||| | ||||||  ||||||||||| ||||||||||    
T  10032284 cccaaaccttgcatatgttatgcattgtccataccaactgagttaagctcacg 10032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 11637570 - 11637634
Alignment:
Q  24 cggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||  |||||||||||| ||| | ||||||  ||||||||||| ||||||||||    
T  11637570 cggggttcgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacg 11637634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 16701596 - 16701648
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    |||||||||||||||   ||||||  |||||||||||||||||||||| ||||    
T  16701596 accttgcatatattattcattgtccctaccaactgagctaagctcacgaggat 16701648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 17210719 - 17210771
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | | ||||  ||||||||||||||||||||||    
T  17210719 cccacaccttgcatatattatgcactgtccctaccaactgagctaagctcacg 17210771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 20927683 - 20927639
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||| | ||||||  |||||||||||||||||||||    
T  20927683 cttgcatatattatgtattgtccataccaactgagctaagctcac 20927639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 22297436 - 22297384
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | |||||  ||||||||||||||||| |||||    
T  22297436 cccagaccttgcatatattatgtattgttcttaccaactgagctaaggtcacg 22297384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 26409316 - 26409252
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||   ||||| ||||||||| | ||||||  ||||||||||||||||||||||    
T  26409316 cggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaagctcacg 26409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 33906544 - 33906500
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||||    
T  33906544 cttgcatacattatgaattgtccttaccaacttagctaagctcac 33906500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 3201 - 3140
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| |||| || ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  3201 gggtttgaactcagaccttgcatatattatgtattgtctttaccaactgagctaagctcacg 3140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 8810700 - 8810639
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| |||| || ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  8810700 gggtttgaactcagaccttgcatatattatgtattgtctttaccaactgagctaagctcacg 8810639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 331896 - 331948
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||| | ||||||| ||||||||||| ||||||||||    
T  331896 cccaaaccttgcatatattatgcattgtctctaccaactgagttaagctcacg 331948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 28046176 - 28046240
Alignment:
Q  24 cggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| |||| |||||||||||||||||| | |||||||||| ||||||| |||||||||||    
T  28046176 cggggttcaaacctcaaaccttgcatatattatgcattgtctttatcaactgaactaagctcacg 28046240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 4450308 - 4450261
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||||||| |||||||||||||||||||    
T  4450308 accttgcatatattatgcattgtctttatcaactgagctaagctcacg 4450261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 5040848 - 5040895
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||    
T  5040848 accttgcatatattatgttttgtctttaccaactgagctaagctcacg 5040895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 7081669 - 7081716
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||||||| |||||||||||||||||||    
T  7081669 accttgcatatattatgtattgtctttatcaactgagctaagctcacg 7081716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 19554216 - 19554158
Alignment:
Q  24 cggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    ||||||||||| | |||||||||||||||||| | |||||||||||||||| |||||||    
T  19554216 cggggttcgaatcacaaaccttgcatatattatgcattgtctttaccaactaagctaag 19554158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 19581512 - 19581446
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||||||||||||||| | || ||||||| ||| |||||||||||||||    
T  19581512 tccggggttcgaatcacaaaccttgcatatattatgtatagtctttatcaattgagctaagctcacg 19581446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 30960068 - 30960114
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  30960068 accttgcatatattaagcattgtccttaccaactgagctaagctcac 30960114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 334191 - 334142
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctc 84  Q
    |||| ||||||||||||||| | |||||||||| ||||||||||||||||    
T  334191 cccagaccttgcatatattatgcattgtctttatcaactgagctaagctc 334142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 655746 - 655810
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||   ||||||||||||||| | ||||||  |||||||||||||||||||||    
T  655746 ccggggttcgaaccccggaccttgcatatattatgcattgtcgataccaactgagctaagctcac 655810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 788913 - 788865
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||||    
T  788913 aaccttgcatatattatgcattgtccttaccaactgagataagctcacg 788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 20744189 - 20744137
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  20744189 cccagaccttgcatatattatgcattgtccataccaactgagctaagctcacg 20744137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 32053835 - 32053787
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  32053835 aaccttgcatatattatgcattgtccataccaactgagctaagctcacg 32053787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 5655303 - 5655369
Alignment:
Q  23 ccggggttcgaac--ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||  || |||| ||||||||||| | ||||||  ||||||||||||||||||||||    
T  5655303 ccggggttcgaactcccgaaccgtgcatatattatgtattgtccctaccaactgagctaagctcacg 5655369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 8381209 - 8381256
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| ||| | ||||||||||||||||||| ||||||||||    
T  8381209 accttgcatatgttatgcattgtctttaccaactgagttaagctcacg 8381256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 18254099 - 18254162
Alignment:
Q  24 cggggttcgaa-cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||| |||  ||||||||| ||||| | |||||| ||||||||||||||||||||||    
T  18254099 cggggttcgaatcccggaccttgcatgtattatgcattgtccttaccaactgagctaagctcac 18254162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 18256929 - 18256882
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| ||| |||||||||||||||||||    
T  18256929 accttgcatatattatgcattgtccttatcaactgagctaagctcacg 18256882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 10780123 - 10780169
Alignment:
Q  41 ccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| | ||||||  ||||||||||||||||||||||    
T  10780123 ccttgcatatattatgcattgtccctaccaactgagctaagctcacg 10780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 14679178 - 14679124
Alignment:
Q  33 aacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||||| | |||||| |||||||| ||| |||| |||||    
T  14679178 aacccaaaccttgcatatattatgcattgtccttaccaaccgagttaagttcacg 14679124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 21936048 - 21936094
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| |||||||  |||||||||||||||| |||||    
T  21936048 accttgcatatattatgaattgttcttaccaactgagctaaactcac 21936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 33938687 - 33938741
Alignment:
Q  33 aacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| |||||||||||||||| | |||||   ||||||||||||||||||||||    
T  33938687 aacccgaaccttgcatatattatgcattgttcataccaactgagctaagctcacg 33938741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 7083009 - 7083054
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||| ||||||| |||||||||||||||    
T  7083009 cttgcatatattatgcattgtccttaccaattgagctaagctcacg 7083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 10118961 - 10118916
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||  |||||||||||||||||||||||    
T  10118961 cttgcatatattatgtattgttcttaccaactgagctaagctcacg 10118916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 21847240 - 21847195
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||    
T  21847240 accttgcatatattatgtattgtccctaccaactgagctaagctca 21847195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 2262191 - 2262243
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| |||||||||| |||| | |||||||||||||| ||||| |||||||||    
T  2262191 cccagaccttgcatacattatgcattgtctttaccaattgagccaagctcacg 2262243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 8217430 - 8217382
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||| | ||||| ||||||||||||||||    
T  8217430 aaccttgcatatattatgtattgtgtctaccagctgagctaagctcacg 8217382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 14441469 - 14441517
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||| | |||||| |||||||||||||||| ||||||    
T  14441469 aaccttgcatacattatgcattgtccttaccaactgagctaacctcacg 14441517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 15291692 - 15291752
Alignment:
Q  28 gttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||||||||||||||||||   |||||| ||||||||| || ||||||||||    
T  15291692 gttcgaacctcaaaccttgcatatattattcattgtccttaccaactaagttaagctcacg 15291752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 17151287 - 17151235
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | ||||||  |||||||| |||||||||||||    
T  17151287 cccagaccttgcatatattatgtattgtcactaccaacttagctaagctcacg 17151235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 17382129 - 17382077
Alignment:
Q  41 ccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    ||||||||||||||   ||||||  |||||||||||||||||||||| |||||    
T  17382129 ccttgcatatattatacattgtccataccaactgagctaagctcacgaggata 17382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 17829326 - 17829370
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | || ||| |||||||||||||||||||||||    
T  17829326 ttgcatatattatgcatagtccttaccaactgagctaagctcacg 17829370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 20568289 - 20568353
Alignment:
Q  24 cggggttcgaacccaaacct-tgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||  |||  ||||||||||| | | |||| |||||||||||||||||||||||    
T  20568289 cggggttcgaaccccgacccctgcatatattatgcaatgtccttaccaactgagctaagctcacg 20568353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 26320561 - 26320625
Alignment:
Q  23 ccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||| ||||||  ||||||||||| ||| | ||||||  ||||||||||||||||||||||    
T  26320561 ccggagtttgaacccggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 26320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 26522516 - 26522472
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||    
T  26522516 cttgtatatattatgcattgtccttaccaactgagctaagctcac 26522472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 30200891 - 30200826
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| |||||||||||||||||| | |||||| ||| ||||||||||||||||||    
T  30200891 tccggggttcgaacctcaaaccttgcatatattatgcattgtccttagcaactgagctaagctcac 30200826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 54230095 - 54230159
Alignment:
Q  22 tccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||||| ||||    
T  54230095 tccggggttcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagctaaactca 54230159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 52119440 - 52119377
Alignment:
Q  23 ccggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||  |||||||||||||||| | |||||| |||||||||||||||||||||    
T  52119440 ccggggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaagctca 52119377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 1149069 - 1149131
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  1149069 gggttcgaaccctagaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 1149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 13042815 - 13042861
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  13042815 accttgcatatattataaattgtctttaccaactgagctaagctcac 13042861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 13050892 - 13050938
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  13050892 accttgcatatattataaattgtctttaccaactgagctaagctcac 13050938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 5702179 - 5702239
Alignment:
Q  27 ggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| |||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  5702179 ggttcgaacctcaaaccttgcatatattatgcattgtctt-accaactgagctaagctcacg 5702239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 48376899 - 48376834
Alignment:
Q  23 ccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| ||||||||| ||||||| ||||||||| | ||| ||||||||||||||||||||||||||    
T  48376899 ccgggattcgaaccccaaaccttacatatattatgcattatctttaccaactgagctaagctcacg 48376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 16980368 - 16980416
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||||    
T  16980368 aaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 16980416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 46469340 - 46469276
Alignment:
Q  23 ccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| |||||||||  |||||| |||||||| | |||||| |||||||||||||||||||||||    
T  46469340 ccgggattcgaaccccgaccttgaatatattatgcattgtccttaccaactgagctaagctcacg 46469276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 21914834 - 21914897
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| ||||||||  |||||||||| |||| | |||||| |||||||||||||||||||||||    
T  21914834 cggggctcgaacccggaccttgcatacattatgtattgtcattaccaactgagctaagctcacg 21914897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 35191816 - 35191879
Alignment:
Q  25 ggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | ||||||||||||||| | |||||| |||||||||||||||||| ||||    
T  35191816 ggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaagcgcacg 35191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 7868779 - 7868721
Alignment:
Q  29 ttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||| |||||||||||| | |||||  |||||||||||||||||||||||    
T  7868779 ttcgaacccgaactttgcatatattatgcattgttcttaccaactgagctaagctcacg 7868721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 50570203 - 50570249
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||    
T  50570203 aaccttgcatatattatgcattgtctataccaactgagctaagctca 50570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 53208031 - 53207969
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||||||||||||||| | |||| | |||||||||||||||||||||||    
T  53208031 gggttcgaaccccagaccttgcatatattatgcattgcccttaccaactgagctaagctcacg 53207969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 2662139 - 2662098
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaa 80  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  2662139 aaccttgcatatattatgcattgtctttaccaactgagctaa 2662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 4216400 - 4216461
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||  ||||||||||||||| | |||||| ||| ||||||||||||| |||||    
T  4216400 gggttcgaaccccgaccttgcatatattatgcattgtccttatcaactgagctaagttcacg 4216461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 5186897 - 5186832
Alignment:
Q  22 tccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||||||| ||||||||||||||| | ||||||  ||||| ||||| ||||||||||    
T  5186897 tccggggtttgaacccagaccttgcatatattaagcattgtccctaccagctgagttaagctcacg 5186832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 8113579 - 8113624
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||    
T  8113579 cttgcatatattatgcattgtccttaccaactgagctaagctcacg 8113624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 20370281 - 20370350
Alignment:
Q  26 gggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggatat 94  Q
    |||||||||||| ||||||||||||| ||| | ||||||  || ||||||||||||||||||| ||||||    
T  20370281 gggttcgaaccctaaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgaggatat 20370350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 21914070 - 21914131
Alignment:
Q  25 ggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||| | ||||||||||||||| | |||||| |||||||||||| ||||||||    
T  21914070 ggggttcgaaccccataccttgcatatattatgcattgtccttaccaactgagttaagctca 21914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 2078291 - 2078239
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||| | ||||||| ||||||||||| |||| |||||    
T  2078291 cccaaaccttgcatatattatgcattgtctctaccaactgagttaagttcacg 2078239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 8127514 - 8127462
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| ||| | |||||| |||||||||||| ||||||||||    
T  8127514 cccaaaccttgcatattttatgcattgtccttaccaactgagttaagctcacg 8127462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 10926516 - 10926472
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    |||||||||||||||| | |||||| |||||||||||||||||||    
T  10926516 aaccttgcatatattatgcattgtccttaccaactgagctaagct 10926472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 27185528 - 27185476
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  27185528 cccagaccttgcatatattatgtattgtccctaccaactgagctaagctcacg 27185476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 33223915 - 33223867
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  33223915 aaccttgcatatattatgcattgtttctaccaactgagctaagctcacg 33223867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 35392054 - 35392002
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| ||||||||| | |||||| |||||||||||||||| ||||||    
T  35392054 cccaaaccttacatatattatgtattgtcattaccaactgagctaaactcacg 35392002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 35863823 - 35863871
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    |||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  35863823 cccagaccttgcatatattatgtattgtccttaccaactgagctaagct 35863871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 43777058 - 43777118
Alignment:
Q  27 ggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| |||||| |||||||||||||||| | || |||  ||||||||||||||||||||||    
T  43777058 ggtttgaacccgaaccttgcatatattatgcatggtccctaccaactgagctaagctcacg 43777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 53996363 - 53996299
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||| ||||||||| | ||||||||||||||| | ||||||  |||||||||||||||||||||    
T  53996363 ccgggattcgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 5117266 - 5117207
Alignment:
Q  29 ttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| |||||||| ||||||||| | |||||| ||| |||||||||||||||||||    
T  5117266 ttcgaacctcaaaccttacatatattatgtattgtccttatcaactgagctaagctcacg 5117207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 10498710 - 10498757
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  10498710 accttgcatatattatgcattgtccataccaactgagctaagctcacg 10498757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 16792989 - 16793036
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||| ||||||||| ||||||||||||    
T  16792989 accttgcatatattatgcattgtctataccaactgtgctaagctcacg 16793036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 18870740 - 18870787
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  18870740 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 18870787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 21245844 - 21245785
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggatat 94  Q
    |||| ||||| ||||||||| | |||||| ||||||||| |||||||||||||| |||||    
T  21245844 cccagaccttacatatattatgcattgtccttaccaactaagctaagctcacgcagatat 21245785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 21513339 - 21513288
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||| |||||||||| |||| | |||||| ||||||||||||||||||||||    
T  21513339 cccagaccttgcataaattatgcattgtccttaccaactgagctaagctcac 21513288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 22843511 - 22843464
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||| ||||||||| | ||||||||||| |||||||||||||||||    
T  22843511 aaccttacatatattatgcattgtctttactaactgagctaagctcac 22843464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 23147976 - 23148039
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||   |||| |||||||||| | |||||| ||||||||||||||||||||||    
T  23147976 cggggttcgaaccccggacctcgcatatattatgtattgtccttaccaactgagctaagctcac 23148039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 29631250 - 29631187
Alignment:
Q  23 ccggggttcgaa-cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||| ||| ||| |||||||||||||||| | ||||||  ||||||||||||||||||||    
T  29631250 ccggggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaagctca 29631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 45254281 - 45254234
Alignment:
Q  36 ccaaaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    ||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  45254281 ccaaaccttacatatattatgcattgtccttaccaactgagctaagct 45254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 48315039 - 48315086
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||| || |||||||||||||||||||||||    
T  48315039 accttgcatatattatgcattatccttaccaactgagctaagctcacg 48315086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 13800713 - 13800667
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | |||||  ||||||||||||||||||||||    
T  13800713 accttgcatatattatgcattgttcttaccaactgagctaagctcac 13800667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 14741859 - 14741805
Alignment:
Q  22 tccggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactga 75  Q
    |||| ||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  14741859 tccgaggttcgaactccaaaccttgcatatattatgcattgtccttaccaactga 14741805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 22462369 - 22462311
Alignment:
Q  29 ttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| || ||||||||| | |||||| ||| |||||||| ||||||||||    
T  22462369 ttcgaacccaaacattacatatattatgcattgtccttatcaactgagttaagctcacg 22462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 52089380 - 52089326
Alignment:
Q  23 ccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgag 76  Q
    ||||||||||||||| |||||||||||||||||   ||||||| |||||||||||    
T  52089380 ccggggttcgaaccccaaaccttgcatatattatatattgtctctaccaactgag 52089326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 53681877 - 53681939
Alignment:
Q  26 gggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||| ||||||||||||| | |||||  |||||||||||| ||||||||||    
T  53681877 gggttcgaacctcaaatcttgcatatattatgcattgttcttaccaactgaggtaagctcacg 53681939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 17588406 - 17588361
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||| |||||||||||| ||||||||||    
T  17588406 cttgcatatattatgcattgtccttaccaactgagttaagctcacg 17588361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 21506755 - 21506820
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||||| | ||||||||||| ||| | ||||||  ||||||||||||||||||||||    
T  21506755 ccggggttcaaaccccagaccttgcatattttatgcattgtccataccaactgagctaagctcacg 21506820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 44579700 - 44579635
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||   ||||||||||| ||| | ||||||  ||||||||||||||||||||||    
T  44579700 ccggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 44579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 45096088 - 45096031
Alignment:
Q  25 ggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    |||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||||    
T  45096088 ggggttcgaaccacagaccttgcatatattatgcattgtccttatcaactgagctaag 45096031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 4402149 - 4402105
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||   |||||| ||||||||||||||||||||||    
T  4402149 cttgcatatattatccattgtccttaccaactgagctaagctcac 4402105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 21331431 - 21331479
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||  || |||||||||||||||||||    
T  21331431 aaccttgcatatattatgcattgtccataacaactgagctaagctcacg 21331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 21549101 - 21549041
Alignment:
Q  24 cggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    |||||||||||||| |||||||||||||||||   ||||||  || |||||||||||||||    
T  21549101 cggggttcgaaccctaaaccttgcatatattatacattgtccatatcaactgagctaagct 21549041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 22486734 - 22486682
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| ||||||||||||| | |||||  |||||||||||| ||||||||||    
T  22486734 cccaaatcttgcatatattatgcattgttcttaccaactgagttaagctcacg 22486682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 25441497 - 25441561
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||| |||||| | ||||||||||||||| | ||||||  |||||||||||||||| ||||    
T  25441497 ccggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagttcac 25441561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 25505701 - 25505761
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||| | ||||||||||||||| | |||||| |||| ||||||| ||||||||    
T  25505701 gggttcgaaccccagaccttgcatatattatgcattgtccttacaaactgagttaagctca 25505761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 28595848 - 28595788
Alignment:
Q  27 ggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| ||| ||| |||||||| | |||||||||||||| |||| |||| |||||    
T  28595848 ggttcgaacccgaactttgtatatattatgcattgtctttaccaattgagttaagttcacg 28595788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 41259018 - 41258970
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||| ||||||||| | |||||||||||    
T  41259018 aaccttgcatatattatgcattgtccttaccaactaaactaagctcacg 41258970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 45309145 - 45309205
Alignment:
Q  28 gttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| ||||||||| ||||||||  |||||| | ||||||||||| ||||||||||    
T  45309145 gttcgaacctcaaaccttgtatatattataaattgtttataccaactgagttaagctcacg 45309205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 47377363 - 47377411
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| |||||||| | |||||| |||||||||||| ||||||||||    
T  47377363 aaccttgtatatattatgcattgtccttaccaactgagttaagctcacg 47377411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 49600274 - 49600326
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| |||||||||||||||   ||||||| ||| ||||||||||||||||||    
T  49600274 cccagaccttgcatatattatttattgtctctactaactgagctaagctcacg 49600326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 50037358 - 50037310
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||| | ||||||  ||||||||||||||||||||||    
T  50037358 aaccttgcatacattatgcattgtccataccaactgagctaagctcacg 50037310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 52904161 - 52904205
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | |||||| |||||||||||||||| ||||||    
T  52904161 ttgcatatattatgcattgtccttaccaactgagctaacctcacg 52904205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 55126053 - 55126005
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||| | | |||||||||||||||||||    
T  55126053 aaccttgcatatattatgtattgtcctcatcaactgagctaagctcacg 55126005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 22847467 - 22847519
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  22847467 cccaaaccttgcatatattacgcattttccttaccaactgagctaagctcacg 22847519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 17704059 - 17704004
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggatatc 95  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||    
T  17704059 accttgcatatattatgcattgtccttaccaactgagctaagctcacgaggatatc 17704004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 30623356 - 30623293
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||| | ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  30623356 cggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaagctcac 30623293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 10152520 - 10152442
Alignment:
Q  23 ccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggatatccttta 100  Q
    |||| ||||||||| |||||||||||||| |||   ||||||| |||||||||||||||||||||| ||||||| ||||    
T  10152520 ccggagttcgaacctcaaaccttgcatattttatacattgtctataccaactgagctaagctcacgaggatatcgttta 10152442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 13286194 - 13286130
Alignment:
Q  23 ccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| ||||||  | ||||||||||||| | ||||||| ||||||||||||||||||||||    
T  13286194 ccggggtttgaacccggatcttgcatatattatgcattgtctataccaactgagctaagctcacg 13286130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 19778111 - 19778064
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  19778111 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 19778064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 27191804 - 27191757
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||    
T  27191804 accttgcatatattatgaattgttcttaccaactgagctaagctcacg 27191757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 37015851 - 37015898
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  37015851 accttgcatatattatgcattgtctctaccaactgagctaagctcacg 37015898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 1244701 - 1244767
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||| |||||||| | |||||| ||||||||||||||||| |||||    
T  1244701 tccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagctaagttcacg 1244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 9019563 - 9019624
Alignment:
Q  25 ggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||| ||||||| ||||||||||||||| | ||||||||||||||||| | ||||||||    
T  9019563 ggggttcaaacccaagaccttgcatatattatgcattgtctttaccaactgcgttaagctca 9019624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 29376964 - 29376900
Alignment:
Q  24 cggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| |||| ||| ||||||||||||||||| ||||||  ||||||||||| ||||||||||    
T  29376964 cggggtttgaactccagaccttgcatatattacgcattgtccataccaactgagttaagctcacg 29376900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 39821935 - 39821883
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  39821935 cccagaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 39821883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 8717489 - 8717544
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggatat 94  Q
    |||||||||||||||| | ||||||  ||||||||||||||| |||||| ||||||    
T  8717489 aaccttgcatatattatgcattgtccataccaactgagctaaactcacgaggatat 8717544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 11709032 - 11708985
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  11709032 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 11708985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 15310388 - 15310321
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatatt-acgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| ||| |||||||||||||| | | ||||||| || |||||||||||||||||||    
T  15310388 tccggggttcgaacgcaagaccttgcatatatttatgcattgtctatatcaactgagctaagctcacg 15310321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 15490757 - 15490690
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatatt-acgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| ||| |||||||||||||| | | ||||||| || |||||||||||||||||||    
T  15490757 tccggggttcgaacgcaagaccttgcatatatttatgcattgtctatatcaactgagctaagctcacg 15490690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 20469310 - 20469373
Alignment:
Q  25 ggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| || |||||||||||||||| | ||||| | |||||||||| |||||||||||    
T  20469310 ggggttcgaactccgaaccttgcatatattatgcattgtttataccaactgatctaagctcacg 20469373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 27587267 - 27587220
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | | |||||| |||||||||||||||||||||||    
T  27587267 accttgcatatatcatgcattgtccttaccaactgagctaagctcacg 27587220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 27750919 - 27750966
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | | |||| |||||||||||||||||||||||    
T  27750919 accttgcatatattatgcactgtccttaccaactgagctaagctcacg 27750966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 29186548 - 29186501
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||| |||||| |||||||||||| | ||||||||    
T  29186548 accttgcatatattacgcattgtccttaccaactgagttgagctcacg 29186501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 31466242 - 31466313
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    ||||||||||||||| | ||||| ||| ||||| | |||||  ||||||||||||||||||||||| |||||    
T  31466242 ccggggttcgaacccgagaccttacatctattatgcattgtacttaccaactgagctaagctcacgaggata 31466313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 34997524 - 34997457
Alignment:
Q  22 tccggggttcgaacccaa-accttgcatatatt-acgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||  |||||||||||||| | | ||||||| || |||||||||||||||||||    
T  34997524 tccggggttcgaacccatgaccttgcatatatttatgcattgtctatatcaactgagctaagctcacg 34997457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 43962039 - 43962086
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||| ||||    
T  43962039 accttgcatatattatgtattgtccttaccaactgagctaagcccacg 43962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 28219925 - 28219863
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||  |||||||| |||||| | ||| || ||| ||||||||||||||||||    
T  28219925 cggggttcgaacccggaccttgcaaatattatgcattatccttaacaactgagctaagctcac 28219863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 30427777 - 30427731
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | ||||||  |||||||||||||||||||||    
T  30427777 accttgcatatattatgcattgtccataccaactgagctaagctcac 30427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 35682700 - 35682754
Alignment:
Q  33 aacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| |||||| ||||||||| | ||||||  ||||||||||||||||||||||    
T  35682700 aacccgaaccttacatatattatggattgtccgtaccaactgagctaagctcacg 35682754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 36018544 - 36018590
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||| | ||||||| |||||||| |||||||||||    
T  36018544 aaccttgcatatattatgcattgtctctaccaactaagctaagctca 36018590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 44293636 - 44293574
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | | ||| ||||||||| | ||||||| ||||||||||||||||||||||    
T  44293636 gggttcgaaccccagatcttacatatattatgcattgtctataccaactgagctaagctcacg 44293574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 2666188 - 2666229
Alignment:
Q  46 catatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||||||||| ||||||||||||| |||||    
T  2666188 catatattacgcattgtctttatcaactgagctaagttcacg 2666229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 9656012 - 9656057
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||| ||| | |||||| |||||||||||||||||||||    
T  9656012 accttgcatattttatgcattgtccttaccaactgagctaagctca 9656057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 15079165 - 15079214
Alignment:
Q  38 aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||| | ||||||  ||||||||||| ||||||||||    
T  15079165 aaaccttgcatatattatgcattgtccctaccaactgagttaagctcacg 15079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 15438499 - 15438454
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| | |||||| ||||||| |||||||||||||    
T  15438499 accttgcatatattatgcattgtccttaccaagtgagctaagctca 15438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 15529803 - 15529758
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| | |||||| ||||||| |||||||||||||    
T  15529803 accttgcatatattatgcattgtccttaccaagtgagctaagctca 15529758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 23816834 - 23816789
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | ||| || |||||||||||||||||||||||    
T  23816834 cttgcatatattatgcattatccttaccaactgagctaagctcacg 23816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 38204441 - 38204470
Alignment:
Q  58 attgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||||||||||||||||    
T  38204441 attgtctttaccaactgagctaagctcacg 38204470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 444182 - 444130
Alignment:
Q  28 gttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaa 80  Q
    ||||||||||  | ||||||| ||||| | |||||||||||||||||||||||    
T  444182 gttcgaaccccgaacttgcatgtattatgcattgtctttaccaactgagctaa 444130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 3889929 - 3889881
Alignment:
Q  47 atatattacgaattgtctttaccaactgagctaagctcacgcggatatc 95  Q
    |||||||| | |||||||||||||||| ||||||| ||||| |||||||    
T  3889929 atatattatgcattgtctttaccaactaagctaagttcacggggatatc 3889881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 7679949 - 7679905
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    |||||||||||||||| | ||||||||| ||||||||| ||||||    
T  7679949 aaccttgcatatattatgcattgtctttgccaactgagttaagct 7679905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 8442502 - 8442546
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctc 84  Q
    ||||||||||||||| | |||||| |||||||||||| |||||||    
T  8442502 accttgcatatattatgcattgtccttaccaactgagttaagctc 8442546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 8910002 - 8910042
Alignment:
Q  46 catatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  8910002 catatattatgcattgtccttaccaactgagctaagctcac 8910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 11771766 - 11771710
Alignment:
Q  27 ggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    ||||||||| |  ||||||||||||||| | ||||||| || |||||||||||||||    
T  11771766 ggttcgaactcggaccttgcatatattatgtattgtctctatcaactgagctaagct 11771710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 13477943 - 13477899
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | |||||| ||||||||| |||||||||||||    
T  13477943 ttgcatatattatgcattgtccttaccaactcagctaagctcacg 13477899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 16081357 - 16081305
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| |||||   |||||| ||| |||||||||||||||||||    
T  16081357 cccaaaccttgcatgtattatacattgtccttagcaactgagctaagctcacg 16081305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 19488351 - 19488299
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| |||||| |||||||| | |||||| ||||||||||||||| |||||||    
T  19488351 cccagaccttgtatatattatgcattgtccttaccaactgagctatgctcacg 19488299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 27571859 - 27571899
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactga 75  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  27571859 cccaaaccttgcatatattatgcattgtctgtaccaactga 27571899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 32878708 - 32878660
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| |||||||||| | |||||  |||||||||||||||||||||||    
T  32878708 aacctcgcatatattatgcattgttcttaccaactgagctaagctcacg 32878660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 36781451 - 36781407
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||    
T  36781451 ttgcatatattatgtattgtccttaccaactgagctaggctcacg 36781407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 42208484 - 42208524
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaa 80  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  42208484 accttgcatatattatgcattgtccttaccaactgagctaa 42208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 18231484 - 18231535
Alignment:
Q  36 ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  18231484 ccaaaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 18231535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 24393310 - 24393244
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| || ||||||||||||||| | |||||| ||| |||||||||||||||||||    
T  24393310 tccggggttcgaacctcagaccttgcatatattatgcattgtccttaacaactgagctaagctcacg 24393244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 37320518 - 37320579
Alignment:
Q  27 ggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| | |||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  37320518 ggttcgaacctcgaaccttgcatatattatgcattgtctttaccaactgagttaagctcacg 37320579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 39761502 - 39761437
Alignment:
Q  22 tccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||| |||||| ||||||||||||||| | |||||| ||| |||||||||||| ||||||    
T  39761502 tccggggttcaaacccagaccttgcatatattatgcattgtccttatcaactgagctaaactcacg 39761437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 9383219 - 9383271
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  9383219 cccaaaccttgcatatattatgcattgtccataccaactgagctaagctcacg 9383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 10156064 - 10156016
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||||    
T  10156064 aaccttgcatatattatgtattgtccttaccaactgagctaagctcacg 10156016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 7206171 - 7206124
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  7206171 accttgcatatattatgcattgtctctaccaactgagctaagctcacg 7206124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 19179065 - 19179112
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  19179065 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 19179112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 20120735 - 20120782
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||||    
T  20120735 aaccttgcatatattatgcattgtccttaccaactgagctaagctcac 20120782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 22608573 - 22608526
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  22608573 accttgcatatattatgcattgtctctaccaactgagctaagctcacg 22608526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 24593422 - 24593375
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  24593422 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 24593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 2257035 - 2256970
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||||||||||| | ||||||  ||||||||||| ||||||||||    
T  2257035 ccggggttcgaaccccagaccttgcatatattatgcattgtccataccaactgagttaagctcacg 2256970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 40099398 - 40099443
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||    
T  40099398 accttgcatatattatgcattgtccttaccaactgagctaagctca 40099443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 44496717 - 44496762
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||    
T  44496717 cttgcatatattatgtattgtccttaccaactgagctaagctcacg 44496762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 2687375 - 2687435
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||| ||| |||||||||| | | |||||  ||||||||||||||||||||||    
T  2687375 gggttcgaacccgaactttgcatatataatgcattgttcttaccaactgagctaagctcac 2687435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 4897591 - 4897543
Alignment:
Q  38 aaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||||    
T  4897591 aaaccttgcatatattatgcattgtccttaccaactgagttaagctcac 4897543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 4944985 - 4944937
Alignment:
Q  38 aaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||||    
T  4944985 aaaccttgcatatattatgcattgtccttaccaactgagttaagctcac 4944937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 9842212 - 9842264
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| ||| | ||||||  ||||||||||||||||||||||    
T  9842212 cccaaaccttgcatattttatgcattgtccctaccaactgagctaagctcacg 9842264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 12124730 - 12124678
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    ||||||||||||||| | |||||| ||||||||||||||||||| ||| ||||    
T  12124730 accttgcatatattatgcattgtccttaccaactgagctaagctgacggggat 12124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 22523026 - 22523074
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  22523026 aaccttgcatatattatgtattgtccataccaactgagctaagctcacg 22523074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 34903582 - 34903518
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||||||||||| || ||||||||||||||| | | |||| ||||||||||| |||||||||    
T  34903582 tccggggttcgaacctcagaccttgcatatattatgcactgtccttaccaactgaactaagctca 34903518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 35727488 - 35727436
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||| | |||||  |||||||||||| ||||||||||    
T  35727488 cccaaaccttgcatatattatgcattgttcttaccaactgagttaagctcacg 35727436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 3197078 - 3197141
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| ||| || |||||||||||||||| | ||||||  ||||||||||||||| ||||||    
T  3197078 cggggtttgaatccgaaccttgcatatattatgcattgtccctaccaactgagctaaactcacg 3197141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 7413204 - 7413251
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| |||||||| | |||||| |||||||||||||||||||||||    
T  7413204 accttgtatatattatgcattgtccttaccaactgagctaagctcacg 7413251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 10332290 - 10332345
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggatatc 95  Q
    ||||| ||||||||| | |||||| ||| ||||||||||||||||||| |||||||    
T  10332290 accttccatatattatgcattgtccttatcaactgagctaagctcacgaggatatc 10332345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 12124591 - 12124544
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||| ||||||    
T  12124591 accttgcatatattatgcattgtccttaccaactgagctaaactcacg 12124544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 19156163 - 19156226
Alignment:
Q  25 ggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| ||||| |||||||||||||||||| | | |||| ||||||| |||||||||||||||    
T  19156163 ggggtttgaacctcaaaccttgcatatattatgtactgtccttaccaattgagctaagctcacg 19156226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 20565090 - 20565137
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  20565090 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 20565137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 24520649 - 24520700
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||| ||| ||||||||||| | |||||||||||||||| ||||||||||||    
T  24520649 cccagaccatgcatatattatgcattgtctttaccaactaagctaagctcac 24520700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 24548057 - 24548010
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| |||||||| | |||||| |||||||||||||||||||||||    
T  24548057 accttgaatatattatggattgtccttaccaactgagctaagctcacg 24548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 43117205 - 43117252
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||| ||||||    
T  43117205 accttgcatatattatgcattgtccttaccaactgagctaaactcacg 43117252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 4056836 - 4056790
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||    
T  4056836 accttgcatatattatgcattgtccttaccaaccgagctaagctcac 4056790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 5676784 - 5676738
Alignment:
Q  41 ccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| | |||||| |||||||||||| ||||||||||    
T  5676784 ccttgcatatattatgcattgtcattaccaactgagttaagctcacg 5676738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 7302141 - 7302203
Alignment:
Q  25 ggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| ||||||||||| ||| | ||||||  || ||||||||||||| |||||    
T  7302141 ggggttcgaacccagaccttgcatattttatgcattgtccctatcaactgagctaagttcacg 7302203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 12303628 - 12303582
Alignment:
Q  37 caaaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||    
T  12303628 caaaccttgcatatattatacattgactttaccaactgagctaagct 12303582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 13000731 - 13000685
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  13000731 accttacatatattatgcattatctttaccaactgagctaagctcac 13000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 15654869 - 15654931
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||||||||||| ||| | ||| || |||||||||||||||||||||||    
T  15654869 gggttcgaaccccagaccttgcatattttatgcattatccttaccaactgagctaagctcacg 15654931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 26133534 - 26133580
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||    
T  26133534 aaccttgcatatattatgcattgtccttaccaactgagttaagctca 26133580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 28771647 - 28771581
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| |  | ||||||||||||| | |||||| |||||||||||||||| ||||||    
T  28771647 tccggggttcgaaccgcggatcttgcatatattatgcattgtccttaccaactgagctaaactcacg 28771581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 35685063 - 35685121
Alignment:
Q  28 gttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||| | ||||||||||||||| | |||||| |||||||||||||||| ||||    
T  35685063 gttcgaaccctagaccttgcatatattatgcattgtccttaccaactgagctaaactca 35685121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 40967383 - 40967433
Alignment:
Q  37 caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||| | |||||| ||| |||||||| ||||||||||    
T  40967383 caaaccttgcatatattatgcattgtccttatcaactgagttaagctcacg 40967433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 7029408 - 7029453
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||||||    
T  7029408 cttgcatatattatgtattgtttttaccaactgagctaatctcacg 7029453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 9459079 - 9459124
Alignment:
Q  47 atatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    |||||||| | |||||||||| ||||||||||||||||||| ||||    
T  9459079 atatattatgcattgtctttatcaactgagctaagctcacggggat 9459124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 10991604 - 10991543
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||| |||||||||  ||||| ||||||||| | |||||| |||||||||||| ||||||||    
T  10991604 cgggattcgaacccggaccttacatatattatgtattgtccttaccaactgagttaagctca 10991543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 24592843 - 24592908
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| |||||| | ||||||||||||||| | ||||||  |||||||||||||||| |||||    
T  24592843 ccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagttcacg 24592908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 27934874 - 27934919
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||    
T  27934874 cttgtatatattatgtattgtccttaccaactgagctaagctcacg 27934919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 39068725 - 39068770
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||| ||| |||||||||||||||||||    
T  39068725 cttgcatatattatgcattgtccttatcaactgagctaagctcacg 39068770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 2429063 - 2429015
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| ||||||||| | |||||| ||||||||||| |||||||||||    
T  2429063 aaccttacatatattatgcattgtccttaccaactgaactaagctcacg 2429015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 4122023 - 4122075
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||||||| | ||||||  ||||| ||||||||||||||||    
T  4122023 cccagaccttgcatatattatgcattgtccataccagctgagctaagctcacg 4122075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 5028920 - 5028856
Alignment:
Q  23 ccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||| |||||| ||||||| ||||||||| | |||||| | | ||||||||||||||||||    
T  5028920 ccggggtttgaaccccaaaccttacatatattatgcattgtcctaatcaactgagctaagctcac 5028856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 7052820 - 7052772
Alignment:
Q  40 accttgcatat-attacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||| | |||||| |||||||||||||||||||||||    
T  7052820 accttgcatattattatgcattgtccttaccaactgagctaagctcacg 7052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 9686503 - 9686463
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaa 80  Q
    ||||||||||||||| | ||||||| |||||||||||||||    
T  9686503 accttgcatatattatgtattgtctataccaactgagctaa 9686463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 16877171 - 16877123
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||  ||||| ||||||||||||||||    
T  16877171 aaccttgcatatattatgcattgtccataccagctgagctaagctcacg 16877123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 16989302 - 16989254
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||  ||||| ||||||||||||||||    
T  16989302 aaccttgcatatattatgcattgtccataccagctgagctaagctcacg 16989254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 18324911 - 18324955
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||| | |||||| |||||||||||| |||||||||    
T  18324911 cttgcatatattatgcattgtccttaccaactgagttaagctcac 18324955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 22267575 - 22267523
Alignment:
Q  24 cggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgag 76  Q
    ||||||| |||| |||||||||||||||||| | ||||||  |||||||||||    
T  22267575 cggggtttgaactcaaaccttgcatatattatgcattgtccgtaccaactgag 22267523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 30243297 - 30243249
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||| |||||||| | ||||||| |||||||||||||||| |||||    
T  30243297 aaccttgtatatattatgcattgtctctaccaactgagctaagttcacg 30243249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 30762496 - 30762556
Alignment:
Q  27 ggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||| ||| ||||||||| ||| | ||||||| ||||||||||||||| |||||    
T  30762496 ggttcgaaccctaaatcttgcatattttatgcattgtctataccaactgagctaaactcac 30762556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 35372949 - 35373001
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| |||||||||||||||   |||||| ||||||||||||||| |||||||    
T  35372949 cccagaccttgcatatattatatattgtccttaccaactgagctatgctcacg 35373001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 40896531 - 40896571
Alignment:
Q  47 atatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| | ||||||| ||||||||||||||||||||||    
T  40896531 atatattatgcattgtctataccaactgagctaagctcacg 40896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 42200733 - 42200697
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgag 76  Q
    ||||||||||||||| | |||||||||||||||||||    
T  42200733 accttgcatatattatgtattgtctttaccaactgag 42200697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 42475108 - 42475172
Alignment:
Q  24 cggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| || ||||||||||| ||| | ||||| | ||||||||||| ||||||||||    
T  42475108 cggggttcgaacctcagaccttgcatattttatgcattgtttataccaactgagttaagctcacg 42475172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 43826457 - 43826501
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctc 84  Q
    ||||| ||||||||| | |||||| ||||||||||||||||||||    
T  43826457 accttacatatattatgtattgtccttaccaactgagctaagctc 43826501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 44926411 - 44926463
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||| ||||||| | | ||||||||||||||||||| ||||||||||    
T  44926411 cccagaccttacatatataatgcattgtctttaccaactgagataagctcacg 44926463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 21400023 - 21400085
Alignment:
Q  26 gggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||| ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  21400023 gggttcgaacccaagaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 21400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 9872104 - 9872167
Alignment:
Q  25 ggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| |||||||||||||||||| | ||| || ||||||||||||||| |||||||    
T  9872104 ggggttcgaaccgcaaaccttgcatatattatgcattatccttaccaactgagctatgctcacg 9872167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 17283997 - 17283950
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  17283997 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 17283950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 19620622 - 19620575
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  19620622 accttgcatatattatgtattgtccttaccaactgagctaagctcacg 19620575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 38448881 - 38448928
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  38448881 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 38448928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 52441526 - 52441573
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  52441526 accttgcatatattatgcattgtctataccaactgagctaagctcacg 52441573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 28039855 - 28039921
Alignment:
Q  21 ctccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||| |||| || ||||||||||||||| | |||||| |||||||||||| |||||||||    
T  28039855 ctccggggttcaaacctcagaccttgcatatattatgcattgtccttaccaactgagttaagctcac 28039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 35474017 - 35473951
Alignment:
Q  22 tccggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||  |||||||||||||||| | ||| || ||||||| |||||||||||||||    
T  35474017 tccggggttcgaaccctgaaccttgcatatattatgcattatccttaccaattgagctaagctcacg 35473951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 47528443 - 47528509
Alignment:
Q  22 tccggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| |  ||||||| ||||||| | |||||| |||||||||||||||||||||||    
T  47528443 tccggggttcgaacctcggaccttgcgtatattatgcattgtccttaccaactgagctaagctcacg 47528509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 8148378 - 8148427
Alignment:
Q  38 aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||| | |||||  |||||||||||||||||||||||    
T  8148378 aaaccttgcatatattatgtattgttcttaccaactgagctaagctcacg 8148427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 14521008 - 14520943
Alignment:
Q  23 ccggggttcgaaccc-aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| |||| |||||||| ||| | ||||||  ||||||||||||||||||||||    
T  14521008 ccggggttcgaaccccaaactttgcatattttatgcattgtccataccaactgagctaagctcacg 14520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 34733444 - 34733399
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||    
T  34733444 cttgcatatattatgcattgtccttaccaactgagctaagctcacg 34733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 41926879 - 41926822
Alignment:
Q  29 ttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||  ||||| ||||||||| | |||||| ||||||||||||||||||||||    
T  41926879 ttcgaacccggaccttacatatattatgcattgtccttaccaactgagctaagctcac 41926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 42045369 - 42045434
Alignment:
Q  23 ccggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||| |||| ||| ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  42045369 ccggggtttgaactccagaccttgcatatattatgcattgtccataccaactgagctaagctcacg 42045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 49875596 - 49875661
Alignment:
Q  22 tccggggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||    ||||||||||||||| | |||||| |||||||||||| ||||||||||    
T  49875596 tccggggttcgaacatggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 49875661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 5907845 - 5907798
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||||    
T  5907845 accttgcatatattatgcattgtccttgccaactgagctaagctcacg 5907798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 8253786 - 8253739
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||| | ||||||  |||||||||||||||||||||    
T  8253786 aaccttgcatatattatgcattgtccataccaactgagctaagctcac 8253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 8269383 - 8269430
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  8269383 accttgcatatattatgtattgtccttaccaactgagctaagttcacg 8269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 29233973 - 29234036
Alignment:
Q  25 ggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||| | ||||||||||| ||| | ||||||| ||||||||||||||| ||||||    
T  29233973 ggggttcgaaccccagaccttgcatattttatgcattgtctataccaactgagctaaactcacg 29234036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 30548092 - 30548151
Alignment:
Q  26 gggttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||| |||||| |||||||||||||||| | |||||| ||||||||| || ||||||||    
T  30548092 gggtttgaacccgaaccttgcatatattatgcattgtccttaccaactaagttaagctca 30548151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 34808577 - 34808624
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||| | |||||| ||| ||||||||||||||||||    
T  34808577 aaccttgcatatattatgcattgtccttaacaactgagctaagctcac 34808624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 36371055 - 36371102
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||||    
T  36371055 accttacatatattatgcattgtctctaccaactgagctaagctcacg 36371102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 41677611 - 41677658
Alignment:
Q  46 catatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    ||||||||| | |||||| ||||||||||||||||||||||| |||||    
T  41677611 catatattatgtattgtccttaccaactgagctaagctcacggggata 41677658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 45140021 - 45140068
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  45140021 accttgcatatattatgcattgtccataccaactgagctaagctcacg 45140068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 48100773 - 48100722
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||||||||||||||| ||| | ||||||  |||||||||||||||||||||    
T  48100773 cccaaaccttgcatattttatgcattgtccataccaactgagctaagctcac 48100722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 49183219 - 49183172
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||||||| ||||||    
T  49183219 accttgcatatattatgtattgtccttaccaactgagctaaactcacg 49183172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 50638931 - 50638974
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    ||||||||||||||| | |||||| |||||||||||||||||||    
T  50638931 accttgcatatattatgcattgtccttaccaactgagctaagct 50638974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 24752644 - 24752710
Alignment:
Q  23 ccggggttcgaacccaa-accttgcatat-attacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||  ||||||||||||||||||||||    
T  24752644 ccggggttcgaaccccagaccttgcatattattatgcattgtccataccaactgagctaagctcacg 24752710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 50263427 - 50263381
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    |||||||||||||||| | ||| || |||||||||||||||||||||    
T  50263427 aaccttgcatatattatgcattatcgttaccaactgagctaagctca 50263381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 2613785 - 2613716
Alignment:
Q  24 cggggttcgaaccca-aaccttgcatatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    ||||||||||||||  |||||| ||||| ||| | ||||||  |||||||||||||||||||||| ||||    
T  2613785 cggggttcgaaccccgaaccttacatattttatgcattgtccataccaactgagctaagctcacgaggat 2613716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 5280694 - 5280625
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggat 92  Q
    |||||||||||||| | ||||||||||||||| | | ||||| | ||||||||| |||||||||| ||||    
T  5280694 cggggttcgaaccccagaccttgcatatattatgcactgtctcttccaactgagttaagctcacgaggat 5280625  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 7925404 - 7925363
Alignment:
Q  46 catatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  7925404 catatattatgcattgtctctaccaactgagctaagctcacg 7925363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 10132445 - 10132506
Alignment:
Q  27 ggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| | ||||||||||||||| | |||||| ||||||||||| ||||| |||||    
T  10132445 ggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgatctaagttcacg 10132506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 15803252 - 15803305
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    ||||||||||||||| | |||||| || |||||||| ||||||||||| |||||    
T  15803252 accttgcatatattatgcattgtccttgccaactgaactaagctcacggggata 15803305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 24978292 - 24978243
Alignment:
Q  38 aaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||||| | ||| ||| ||||||||||| ||||||||||    
T  24978292 aaaccttgcatatattatgtattatctataccaactgagttaagctcacg 24978243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 34632213 - 34632168
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||   ||||||| ||||||||||||||||||||||    
T  34632213 cttgcatatattatacattgtctataccaactgagctaagctcacg 34632168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 47719104 - 47719169
Alignment:
Q  23 ccggggttcgaac-ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||| ||||||| || |||||||||||||||| | ||| || |||||||||||| ||||||||||    
T  47719104 ccgggattcgaactccgaaccttgcatatattatgcattatccttaccaactgagttaagctcacg 47719169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 1091226 - 1091178
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||| | ||||||| ||||||||||| ||||||||||    
T  1091226 aaccttgcatacattatgcattgtctataccaactgagttaagctcacg 1091178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 17396759 - 17396707
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||| |||||||| | |||||| ||  |||||||||||||||||||    
T  17396759 cccaaaccttgaatatattatgcattgtccttgtcaactgagctaagctcacg 17396707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 18056714 - 18056774
Alignment:
Q  24 cggggttcgaacc-caaaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    ||||||||||||| || || |||||||||||| | |||||| |||||||||||| ||||||    
T  18056714 cggggttcgaacctcacacattgcatatattatgcattgtccttaccaactgagttaagct 18056774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 18166645 - 18166601
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||||    
T  18166645 ttgcatatattatgcattgtctataccaactgagctaagcccacg 18166601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 19533182 - 19533234
Alignment:
Q  29 ttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaag 81  Q
    |||||||||||| ||||||||||||| | |||||| ||| ||||| |||||||    
T  19533182 ttcgaacccaaatcttgcatatattatgcattgtccttatcaactaagctaag 19533234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 24124844 - 24124892
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||| ||| |||||||||||| ||||||    
T  24124844 aaccttgcatatattatgcattgtccttaacaactgagctaaactcacg 24124892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 27533290 - 27533242
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||  |||||||||| |||||||||||    
T  27533290 aaccttgcatatattatgcattgtccctaccaactgatctaagctcacg 27533242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 29506890 - 29506826
Alignment:
Q  24 cggggttcgaacccaa-accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||   ||||||||||||||| | ||||||| |||||||| || ||||||||||    
T  29506890 cggggttcgaaccctggaccttgcatatattatgtattgtctataccaactaagttaagctcacg 29506826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 34142368 - 34142424
Alignment:
Q  29 ttcgaacccaaaccttgcatatattacgaattgtctttaccaactgagctaagctca 85  Q
    ||||||| | |||||||||||||||| | |||||   ||||||||||||||||||||    
T  34142368 ttcgaactccaaccttgcatatattatgtattgtgcataccaactgagctaagctca 34142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 35605670 - 35605702
Alignment:
Q  66 taccaactgagctaagctcacgcggatatcctt 98  Q
    |||||||||||||||||||||| ||||||||||    
T  35605670 taccaactgagctaagctcacggggatatcctt 35605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 44678031 - 44678075
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagct 83  Q
    |||||||||||||||| | ||||||| ||| ||||||||||||||    
T  44678031 aaccttgcatatattatgcattgtctatacaaactgagctaagct 44678075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 45197431 - 45197383
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||| | |||||||| ||||| ||||||| |||||    
T  45197431 aaccttgcatatattacgtaatgtctttatcaacttagctaagttcacg 45197383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 48681947 - 48681995
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | |||||   ||||||||||||||||||||||    
T  48681947 aaccttgcatatattatgcattgttcataccaactgagctaagctcacg 48681995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 50849087 - 50849135
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| ||||||||| | |||||| |||||||||||| ||||||||||    
T  50849087 aaccttacatatattatgcattgtcattaccaactgagttaagctcacg 50849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 52267815 - 52267763
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||| ||||||||||| ||| | |||||| |||||||||||| ||||||||||    
T  52267815 cccagaccttgcatattttatgcattgtccttaccaactgagttaagctcacg 52267763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 25435 - 25382
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacgcggata 93  Q
    ||||||||||||||| | |||||| |||||||||||| |||||||||| |||||    
T  25435 accttgcatatattatgcattgtccttaccaactgagttaagctcacggggata 25382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 2383 - 2331
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||||||| | ||||||  ||||||| ||||||||||||||    
T  2383 cccaaaccttgcatatattatgcattgtccctaccaaccgagctaagctcacg 2331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 40045 - 39997
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  40045 aaccttgcatatattatgcattgtccataccaactgagctaagctcacg 39997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 90523 - 90475
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||| ||||||||||| ||||||| |||||||| |||||||||||||    
T  90523 aaccttacatatattacgcattgtctataccaactaagctaagctcacg 90475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 10768 - 10819
Alignment:
Q  36 ccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| ||| | |||||| |||||||||||||||| ||||||    
T  10768 ccaaaccttgcatattttatgcattgtccttaccaactgagctaaactcacg 10819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 34903 - 34950
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    ||||||||||||||| | |||||| |||||||||||| ||||||||||    
T  34903 accttgcatatattatgcattgtccttaccaactgagttaagctcacg 34950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 42344 - 42395
Alignment:
Q  35 cccaaaccttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    |||| ||||||||||||||| | |||||| || |||||||||||||||||||    
T  42344 cccagaccttgcatatattatgcattgtccttcccaactgagctaagctcac 42395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 75371 - 75325
Alignment:
Q  40 accttgcatatattacgaattgtctttaccaactgagctaagctcac 86  Q
    ||||||||||||||| | |||||| |||||||||||||| |||||||    
T  75371 accttgcatatattatgcattgtccttaccaactgagcttagctcac 75325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 18337 - 18292
Alignment:
Q  42 cttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||   |||||| |||||||||||||||||||||||    
T  18337 cttgcatatattatacattgtccttaccaactgagctaagctcacg 18292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 3329 - 3377
Alignment:
Q  39 aaccttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||||||| |  ||||| ||||||||||||||| |||||||    
T  3329 aaccttgcatatattatgtcttgtccttaccaactgagctatgctcacg 3377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 239850 - 239806
Alignment:
Q  43 ttgcatatattacgaattgtctttaccaactgagctaagctcacg 87  Q
    |||||||||||| | |||||| |||||||||||||||| ||||||    
T  239850 ttgcatatattatgcattgtccttaccaactgagctaaactcacg 239806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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