View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14847_high_14 (Length: 203)
Name: NF14847_high_14
Description: NF14847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14847_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 37878942 - 37879117
Alignment:
| Q |
14 |
aatattacaataaattataagatttaagccacaaaagttaaacaaaagaacaacaaaaaagaatcaaccagtaaggaaaatagttattctagcaaaaata |
113 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37878942 |
aatattaccataaattataagatttaagccacaaaagttaaacaaaagaacaacaaaaaagaatcaaccagtaaggaaaatagttattctagcaaaaata |
37879041 |
T |
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| Q |
114 |
tgttactcaaattcaattcaccaagggaagtttcaaacttttatagtcaaaaatcatagaagagggactcatttat |
189 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37879042 |
tgttactcaaattcaattcaccaaggaaagtttcaaacttttatagtcaaaaatcatagaagagggactcatttat |
37879117 |
T |
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