View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14847_high_5 (Length: 369)
Name: NF14847_high_5
Description: NF14847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14847_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 36183819 - 36184165
Alignment:
| Q |
1 |
tgttcagttgctccctgtgcctgaaattgattcaatttctcctccacaaatttcttttccatgtcaatgtcaagtcctggaactccatttagtgacacac |
100 |
Q |
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| T |
36183819 |
tgttcagttgttccctgtgcctgaaattgattcaatttctcctccactaatttcttttccatgtcaatgtcaagtcctggaactccatttagtgacacac |
36183918 |
T |
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| Q |
101 |
cgtagcgatgaggatcctctagtatgagtcctcctctctcaccacacacataagctgcaaggtatataacaataagnnnnnnnnggttccgtaagtacaa |
200 |
Q |
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| T |
36183919 |
cgtagcgatgaggatcctctagtatgagtcctcctctctcaccacacacataagctgcaagg--tataacaataagaaaaaaaaggttcggtaagtacaa |
36184016 |
T |
|
| Q |
201 |
cttagatgataaaaataattatttgagattttattcacaaaatacttgcatgcatggccggatctagtataaagattggtttggctatagctacgtcgaa |
300 |
Q |
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|||||||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
36184017 |
cttagatgattaaaaaacttatttgagattttattaacaaaatacttgcatgcatggccggatctagtataaagattggtttggctatagctacgccgaa |
36184116 |
T |
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| Q |
301 |
ttttctccaaataatttttacataagaacagggccgtttttgagatttg |
349 |
Q |
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|||||||||| ||||||||||||||||||||||| ||||||||||||| |
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| T |
36184117 |
ttttctccaatgaatttttacataagaacagggccatttttgagatttg |
36184165 |
T |
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