View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14847_low_7 (Length: 414)
Name: NF14847_low_7
Description: NF14847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14847_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 393
Target Start/End: Original strand, 30211938 - 30212329
Alignment:
| Q |
1 |
cttccaaggaacttcctctccaagtatcttatttgaatctgaatatttggcgttgaagaatcagtaattgcttgccttaaacgacttcttgaatactcta |
100 |
Q |
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| T |
30211938 |
cttccaaggaacttcctctccaagtttcttatttgcatctgaatatttggcgttgaagaatcagtaattacttgccttaaacgacttcttgaacactctt |
30212037 |
T |
|
| Q |
101 |
tatatgacagttttcagaagtagtattattttgaacttgtttcgagtgattctagtaattattctaaagaatctaaccgtatatgattcacatttcaaat |
200 |
Q |
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| T |
30212038 |
tatatgacagttttcagaagtagtattattttgaacttgtttcgagtgattctagtaattattctaaaggatctaactgtatatgattcaaatttcaaat |
30212137 |
T |
|
| Q |
201 |
ataacaataatagtagtaataaaaaatcaattcatatttagttaagtaagtcagccttggtgggtctaaaatannnnnnnnnatggtatagcccaatatt |
300 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||| |
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| T |
30212138 |
ataacaataatagtagtaataaaaaatcaatttatatttagttaagtaagtcagccttggtaggtctaaaata-tcttttttatggtctagtccaatatt |
30212236 |
T |
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| Q |
301 |
ttagttaaatagacttctaaaattttttggtcttctctatttnnnnnnngcttagcataaccttgatccgatgtagtctatagacctatgtcg |
393 |
Q |
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|||||||||||||||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |
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| T |
30212237 |
ttagttaaatagacttctaaaaagttttgatcttctctatttaaaaaaagcttagtataaccttgatccgatgtagtctatagaccaatgtcg |
30212329 |
T |
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