View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1484R-Insertion-14 (Length: 926)

Name: NF1484R-Insertion-14
Description: NF1484R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1484R-Insertion-14
NF1484R-Insertion-14
[»] chr1 (23 HSPs)
chr1 (183-923)||(9451337-9452081)
chr1 (290-520)||(9431245-9431475)
chr1 (9-138)||(9452126-9452255)
chr1 (665-907)||(9428484-9428726)
chr1 (15-142)||(26971714-26971839)
chr1 (17-142)||(20200407-20200532)
chr1 (9-142)||(13166110-13166243)
chr1 (17-138)||(20840582-20840703)
chr1 (44-142)||(22891146-22891244)
chr1 (183-277)||(4245881-4245976)
chr1 (9-102)||(13150048-13150141)
chr1 (187-274)||(13165246-13165334)
chr1 (17-138)||(11667221-11667342)
chr1 (17-142)||(24986699-24986824)
chr1 (21-142)||(4246754-4246877)
chr1 (42-139)||(12753779-12753876)
chr1 (187-274)||(26972622-26972709)
chr1 (44-139)||(1626292-1626387)
chr1 (195-274)||(11668092-11668171)
chr1 (187-262)||(14746004-14746080)
chr1 (17-93)||(10339478-10339553)
chr1 (47-93)||(8282685-8282731)
chr1 (17-95)||(25349548-25349625)
[»] chr5 (21 HSPs)
chr5 (15-142)||(24190579-24190706)
chr5 (9-140)||(22251351-22251482)
chr5 (9-142)||(22404071-22404204)
chr5 (21-142)||(23419879-23420000)
chr5 (44-142)||(30605036-30605134)
chr5 (17-142)||(23757575-23757700)
chr5 (17-142)||(23823031-23823156)
chr5 (187-274)||(25105644-25105732)
chr5 (187-274)||(25164737-25164825)
chr5 (51-142)||(9421868-9421959)
chr5 (44-142)||(22082036-22082134)
chr5 (187-275)||(22404984-22405073)
chr5 (194-274)||(9422697-9422778)
chr5 (21-142)||(26037494-26037614)
chr5 (44-92)||(23624607-23624655)
chr5 (62-140)||(22245722-22245800)
chr5 (183-237)||(23420780-23420834)
chr5 (17-93)||(20714062-20714137)
chr5 (42-142)||(38406077-38406177)
chr5 (15-56)||(9420671-9420712)
chr5 (9-66)||(22240288-22240345)
[»] scaffold0185 (1 HSPs)
scaffold0185 (21-142)||(1690-1811)
[»] chr6 (52 HSPs)
chr6 (17-142)||(17235310-17235435)
chr6 (21-142)||(33666507-33666628)
chr6 (9-142)||(23879601-23879734)
chr6 (17-142)||(8464985-8465110)
chr6 (9-142)||(9281020-9281153)
chr6 (17-142)||(13196040-13196165)
chr6 (17-142)||(25970393-25970518)
chr6 (17-142)||(25974833-25974958)
chr6 (17-142)||(19077859-19077984)
chr6 (183-274)||(14258759-14258851)
chr6 (187-279)||(13870518-13870611)
chr6 (17-138)||(19168166-19168287)
chr6 (17-142)||(20653785-20653910)
chr6 (193-271)||(8465896-8465975)
chr6 (15-142)||(17855911-17856038)
chr6 (21-142)||(13869724-13869845)
chr6 (21-142)||(19893990-19894111)
chr6 (9-142)||(21722718-21722850)
chr6 (187-274)||(20558151-20558239)
chr6 (186-276)||(20989986-20990077)
chr6 (17-131)||(12039028-12039142)
chr6 (198-275)||(19077412-19077490)
chr6 (187-275)||(12039904-12039993)
chr6 (24-140)||(19172133-19172248)
chr6 (187-277)||(17855040-17855131)
chr6 (15-142)||(20989106-20989233)
chr6 (187-277)||(33665639-33665730)
chr6 (17-99)||(12385177-12385258)
chr6 (45-142)||(17527230-17527327)
chr6 (187-271)||(19894735-19894820)
chr6 (9-142)||(21705840-21705973)
chr6 (187-274)||(9281931-9282019)
chr6 (187-274)||(13195172-13195260)
chr6 (47-139)||(24542373-24542465)
chr6 (17-142)||(17863792-17863917)
chr6 (187-274)||(25948377-25948465)
chr6 (30-93)||(23882029-23882092)
chr6 (196-274)||(34991214-34991293)
chr6 (17-71)||(20465231-20465285)
chr6 (15-60)||(19100673-19100718)
chr6 (187-274)||(17234440-17234528)
chr6 (193-275)||(17864640-17864723)
chr6 (187-238)||(21717767-21717818)
chr6 (187-238)||(21725603-21725654)
chr6 (44-99)||(25806167-25806222)
chr6 (44-93)||(15930193-15930242)
chr6 (44-93)||(19598446-19598495)
chr6 (187-274)||(15897896-15897984)
chr6 (196-275)||(25805301-25805381)
chr6 (46-93)||(26964900-26964947)
chr6 (47-92)||(21316941-21316986)
chr6 (48-93)||(34639555-34639600)
[»] chr4 (30 HSPs)
chr4 (17-142)||(16384606-16384731)
chr4 (21-142)||(18600982-18601103)
chr4 (9-142)||(23399506-23399639)
chr4 (9-142)||(25117572-25117705)
chr4 (21-142)||(33898331-33898452)
chr4 (187-275)||(16383737-16383826)
chr4 (187-274)||(10190735-10190823)
chr4 (187-275)||(8163630-8163719)
chr4 (15-138)||(28020023-28020146)
chr4 (187-272)||(33899405-33899491)
chr4 (187-274)||(21477957-21478045)
chr4 (187-274)||(25116672-25116760)
chr4 (17-91)||(10724964-10725038)
chr4 (17-91)||(10938733-10938807)
chr4 (195-274)||(15162718-15162798)
chr4 (44-118)||(9069684-9069758)
chr4 (194-275)||(10724107-10724189)
chr4 (194-275)||(10937876-10937958)
chr4 (43-92)||(15699680-15699729)
chr4 (17-139)||(19183001-19183124)
chr4 (187-229)||(28019198-28019240)
chr4 (17-62)||(15161821-15161866)
chr4 (81-142)||(15161866-15161927)
chr4 (47-139)||(33746638-33746731)
chr4 (48-92)||(10718241-10718285)
chr4 (48-92)||(10932010-10932054)
chr4 (187-274)||(23400411-23400499)
chr4 (19-93)||(15623201-15623274)
chr4 (17-118)||(19660156-19660255)
chr4 (47-92)||(31971680-31971725)
[»] chr3 (31 HSPs)
chr3 (9-142)||(7028381-7028514)
chr3 (9-142)||(17135455-17135588)
chr3 (9-142)||(18482683-18482816)
chr3 (9-142)||(24196241-24196374)
chr3 (17-142)||(13514936-13515062)
chr3 (21-142)||(13791393-13791514)
chr3 (187-275)||(20748384-20748473)
chr3 (9-142)||(1918554-1918687)
chr3 (9-142)||(23953868-23954001)
chr3 (187-274)||(44452329-44452417)
chr3 (31-142)||(18063539-18063650)
chr3 (17-142)||(20626961-20627086)
chr3 (187-274)||(13790528-13790616)
chr3 (187-274)||(19633736-19633824)
chr3 (27-142)||(15572331-15572446)
chr3 (187-277)||(15636095-15636186)
chr3 (17-99)||(21547542-21547624)
chr3 (187-275)||(1919457-1919546)
chr3 (187-274)||(19532105-19532193)
chr3 (45-142)||(19634594-19634692)
chr3 (17-79)||(28051917-28051979)
chr3 (64-142)||(296157-296235)
chr3 (17-90)||(286219-286291)
chr3 (44-92)||(15674183-15674231)
chr3 (47-99)||(17042108-17042160)
chr3 (44-90)||(6578894-6578940)
chr3 (44-93)||(3551824-3551873)
chr3 (47-92)||(13914544-13914589)
chr3 (47-92)||(13920269-13920314)
chr3 (223-275)||(18035154-18035207)
chr3 (195-274)||(23954788-23954869)
[»] chr8 (18 HSPs)
chr8 (9-142)||(22485849-22485982)
chr8 (17-142)||(23540725-23540850)
chr8 (17-142)||(33962449-33962574)
chr8 (183-275)||(23541629-23541723)
chr8 (17-142)||(27924771-27924896)
chr8 (17-142)||(33977775-33977900)
chr8 (17-142)||(45136827-45136951)
chr8 (187-276)||(22472629-22472719)
chr8 (187-275)||(22480935-22481024)
chr8 (22-142)||(26537003-26537123)
chr8 (187-274)||(45133513-45133601)
chr8 (193-274)||(24091821-24091903)
chr8 (195-274)||(11221497-11221577)
chr8 (44-118)||(9997237-9997310)
chr8 (193-274)||(27925651-27925733)
chr8 (44-93)||(18622426-18622475)
chr8 (48-92)||(1684721-1684765)
chr8 (64-121)||(25241095-25241152)
[»] chr2 (15 HSPs)
chr2 (21-138)||(24789481-24789598)
chr2 (9-138)||(12911212-12911341)
chr2 (8-142)||(23759340-23759474)
chr2 (187-274)||(12910338-12910426)
chr2 (187-274)||(23758474-23758562)
chr2 (65-142)||(22611607-22611684)
chr2 (187-274)||(22610741-22610829)
chr2 (195-277)||(36399025-36399110)
chr2 (17-139)||(21531097-21531218)
chr2 (188-277)||(24790382-24790472)
chr2 (44-93)||(21249543-21249592)
chr2 (47-92)||(27108209-27108254)
chr2 (44-92)||(15329086-15329134)
chr2 (47-92)||(24311201-24311246)
chr2 (47-92)||(27111798-27111843)
[»] chr7 (30 HSPs)
chr7 (8-142)||(645849-645982)
chr7 (17-142)||(12326528-12326653)
chr7 (18-142)||(16207200-16207324)
chr7 (17-142)||(15506946-15507071)
chr7 (9-142)||(11520721-11520855)
chr7 (17-142)||(29545459-29545584)
chr7 (17-142)||(4459455-4459580)
chr7 (187-275)||(11521631-11521720)
chr7 (187-274)||(11998728-11998816)
chr7 (22-142)||(20992259-20992379)
chr7 (187-276)||(644980-645070)
chr7 (17-142)||(15438792-15438917)
chr7 (196-274)||(4458588-4458667)
chr7 (195-272)||(11588315-11588393)
chr7 (195-275)||(12325673-12325754)
chr7 (18-118)||(10661602-10661701)
chr7 (193-274)||(13455339-13455421)
chr7 (187-272)||(16208103-16208189)
chr7 (15-126)||(14165892-14166003)
chr7 (17-94)||(26132274-26132350)
chr7 (17-93)||(21261195-21261270)
chr7 (17-93)||(23082095-23082170)
chr7 (47-92)||(9567656-9567701)
chr7 (44-93)||(14927410-14927459)
chr7 (44-93)||(15350876-15350925)
chr7 (44-93)||(23960790-23960839)
chr7 (187-274)||(14165015-14165103)
chr7 (18-78)||(16221892-16221952)
chr7 (44-118)||(42636946-42637020)
chr7 (44-93)||(20924452-20924501)
[»] scaffold0453 (1 HSPs)
scaffold0453 (9-142)||(1311-1444)
[»] scaffold0103 (2 HSPs)
scaffold0103 (9-142)||(24988-25121)
scaffold0103 (187-274)||(25896-25984)
[»] scaffold0129 (1 HSPs)
scaffold0129 (9-142)||(16221-16354)
[»] scaffold0088 (1 HSPs)
scaffold0088 (21-142)||(37306-37427)
[»] scaffold0037 (2 HSPs)
scaffold0037 (9-141)||(109569-109701)
scaffold0037 (187-275)||(110480-110569)
[»] scaffold0059 (3 HSPs)
scaffold0059 (8-142)||(47700-47835)
scaffold0059 (187-272)||(50315-50401)
scaffold0059 (187-276)||(61696-61786)
[»] scaffold0024 (1 HSPs)
scaffold0024 (10-142)||(159787-159919)
[»] scaffold0259 (2 HSPs)
scaffold0259 (21-142)||(16648-16769)
scaffold0259 (187-272)||(17500-17586)
[»] scaffold0213 (1 HSPs)
scaffold0213 (17-142)||(7897-8022)
[»] scaffold0190 (1 HSPs)
scaffold0190 (18-142)||(15941-16064)
[»] scaffold0226 (6 HSPs)
scaffold0226 (17-142)||(17443-17568)
scaffold0226 (17-142)||(26837-26962)
scaffold0226 (17-138)||(6857-6977)
scaffold0226 (193-274)||(18353-18435)
scaffold0226 (193-274)||(27747-27829)
scaffold0226 (187-273)||(7762-7849)
[»] scaffold0359 (1 HSPs)
scaffold0359 (10-142)||(2606-2737)
[»] scaffold0102 (1 HSPs)
scaffold0102 (187-274)||(36854-36942)
[»] scaffold0333 (1 HSPs)
scaffold0333 (187-276)||(5491-5581)
[»] scaffold0006 (2 HSPs)
scaffold0006 (9-142)||(88462-88593)
scaffold0006 (187-271)||(87588-87672)
[»] scaffold0338 (1 HSPs)
scaffold0338 (187-275)||(16437-16525)
[»] scaffold0069 (1 HSPs)
scaffold0069 (10-99)||(9433-9522)
[»] scaffold1001 (1 HSPs)
scaffold1001 (44-139)||(682-776)
[»] scaffold0035 (1 HSPs)
scaffold0035 (44-89)||(38074-38119)
[»] scaffold0034 (1 HSPs)
scaffold0034 (47-92)||(50258-50303)


Alignment Details
Target: chr1 (Bit Score: 535; Significance: 0; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 183 - 923
Target Start/End: Complemental strand, 9452081 - 9451337
Alignment:
Q  183 ctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacatttaaaacaagtgcgctagaatttcaaaaggnnn 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  9452081 ctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacatttaaaacaagtgcgctagaatttcaaaaggaaa 9451982  T
Q  283 nnnngccttattcaaaagaatcattgaaaggtattgctcgcaggttctatggtttacaagaaaaaggagaaggggtaatgactatgcaatttatcattca 382  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  9451981 aaaagccttattcaaaagaatcattgaaaggtattgctcgcaggttctatggtttacaagaaa--ggagaaggggtaatgactatgcaatttatcattca 9451884  T
Q  383 taaaagagaaaacacgatgaatggatgatatggaatccatacctcgaataatgccaacgacaaaacctgcaacagnnnnnnnnnn---gtagagtgaagt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||| ||||||||    
T  9451883 taaaagagaaaacacgatgaatggatgatatggaatccatacctcgaataatgccaacgacaaaacctgcaacagaaaaaaaaaaaaagtatagtgaagt 9451784  T
Q  480 tttttcttgagattaaagaattatagtgcagtttacttcatnnnnnnntaacaataatattatagttcacttttttaacaaaaatgtacgtattacacac 579  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  9451783 tttttcttgagattaaagaattatagtgcagtttacttcataaaaaaataacaataatattatagttcacttttttaacaaaaatgtacgtat---acac 9451687  T
Q  580 acatgtagtaactatacgcttccctatcaattagccaacaagataattatttttaggcttaaatgctcttttgtgagtgattgtaaatactttatataca 679  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  9451686 acatgtagta-ctatacgcttccctatcaattagccaacatgataattatttttaggcttaaatgctcttttgtgaatgattgtaaatactttatatata 9451588  T
Q  680 tttttctttt-aattgaaaagtatgcaaacagtcctaagatgtagccaaaattaatcgaactctgttattgatatttatgttatattatttcacattaat 778  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9451587 tttttcttttcaattgaaaagtctgcaa-cagtcctaagatgtagccaaatttaatcgaactctgttattgatatttatgttatattatttcatattaat 9451489  T
Q  779 ctctcttttccctaatcttaatgcagg---gaagttgacgagatattattcgacttcaactaagtgaagaattttaagataaacttagtgtatatgatta 875  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9451488 ctctcttttccctaatcttaatgcagggaagaagttgacgagatattattcgacttcaactaactgaagaattttaagataaacttagtgcatatgatta 9451389  T
Q  876 ctaaaaatt-aaaattaag-aaattttaaatt-aattagaga-ccttaccaa 923  Q
    ||||||||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  9451388 ctaaaaattaaaaattaagaaaattttaaattaaattagagagccttaccaa 9451337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 290 - 520
Target Start/End: Complemental strand, 9431475 - 9431245
Alignment:
Q  290 ttattcaaaagaatcattgaaaggtattgctcgcaggttctatggtttacaagaaaaaggagaa-ggggtaatgactatgcaatttatcattcataaaag 388  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  9431475 ttattcaaaagaatcattaaaaggtattgctcgcgggttctatgggttacaagaaaaaggagaaaggggtaatgactatgcaatttattattcataaaag 9431376  T
Q  389 agaaaacacgatgaatggatgatatggaatccatacctcgaataatgccaacgacaaaacctgcaacagnnnnnnnnnngtagagtgaagttttttcttg 488  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||   ||||||| |||||||||           |||| | |||||||||||||    
T  9431375 agaaaacacgatgaatggatgatatggaatccataccttgataaatgcctgagacaaaatctgcaacagaaaaaaaaaa-tagaattaagttttttcttg 9431277  T
Q  489 agattaaagaattatagtgcagtttacttcat 520  Q
    |||| | | |||||||||||||||||||||||    
T  9431276 agatcacataattatagtgcagtttacttcat 9431245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 9452255 - 9452126
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9452255 gaaccgaagtttcaacatgtgtttaggcgtctctataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgggttctcgcctact 9452156  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaa 138  Q
    |||||||||||| |||||||||||||||||    
T  9452155 tgtacgcgcgcccgttattgtttaaggaaa 9452126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 665 - 907
Target Start/End: Complemental strand, 9428726 - 9428484
Alignment:
Q  665 aatactttatatacatttttctttt-aattgaaaagtatgcaaacagtcctaagatgtagccaaaattaatcgaactctg-ttattgatatttatgttat 762  Q
    ||||||| ||||| ||||||||||  ||| ||||||| ||||| ||||||||||||||||| ||  |||||||||||||| |||| ||||| ||||||||    
T  9428726 aatacttaatatatatttttctttgcaatagaaaagtctgcaa-cagtcctaagatgtagctaattttaatcgaactctgattatcgatatctatgttat 9428628  T
Q  763 attatttcacattaatctctcttttccctaatcttaatgcagggaagttgacgagatattattcgacttcaactaagtgaagaattttaagataaactta 862  Q
    |||||||||||||||||||||| |||| || |||||||||||||||||||| || ||||||||||||||||| |||||  |||||||||  |||||||||    
T  9428627 attatttcacattaatctctctcttcctta-tcttaatgcagggaagttgatgaaatattattcgacttcaagtaagtatagaattttattataaactta 9428529  T
Q  863 gtgtatatgattactaaaaa-ttaaaattaag-aaattttaaattaa 907  Q
    |||   | ||||||||||||   ||||||||| ||||||||||||||    
T  9428528 gtg--caagattactaaaaacgaaaaattaagaaaattttaaattaa 9428484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 26971714 - 26971839
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacg 114  Q
    ||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  26971714 aagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcctgagttctcgcctatttgtacg 26971813  T
Q  115 cgcgcctgttattgtttaaggaaacaat 142  Q
    ||| |   ||||||||||||||||||||    
T  26971814 cgctc--tttattgtttaaggaaacaat 26971839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 20200407 - 20200532
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||  ||||||||||||||    
T  20200407 gttccaacatgtgtttaggcatctctgtaagatgttggatacgatgttccaacatcctggcacggttcagtatgcctgagtactttcctacttgtacgcg 20200506  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  20200507 cgccctttattgtttaaggaaacaat 20200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 13166243 - 13166110
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| |||||||||||||||||||||||||| |  |||||||||||| ||||||| |||||| |||| || |||||||||||||||||||||||||       
T  13166243 gaaccaaagttccaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggtacggttcagtgtgcctgagttctcgcctgta 13166144  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||| |||||||  ||||||||||||||||||||    
T  13166143 tgtaagcgcgccctttattgtttaaggaaacaat 13166110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 20840582 - 20840703
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||| ||||||||| ||| | ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||||||||| ||    
T  20840582 gttccaacatatgtttaggcatctctgtaagatgttggatacgatgttccaacatcctgacacagttcagtgtgcctgagttcttgcctacttgtacacg 20840681  T
Q  117 cgcctgttattgtttaaggaaa 138  Q
    ||||  ||||||||||| ||||    
T  20840682 cgccctttattgtttaatgaaa 20840703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 22891146 - 22891244
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||| |||||||||| ||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||    
T  22891146 taagttgttggatactatgttccaacatcctggcacggttcagtgtgcctgagttcttgcctacttgtacgcgcgtcctttattgtttaaggaaacaat 22891244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 4245976 - 4245881
Alignment:
Q  183 ctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaaa 277  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| | ||||| |||||||||||| |||||| ||||||||    
T  4245976 ctgcttatcgcgtgatgttgaaacattaatcataacattgcaaacgtcaaaacatcatacataacatattaaaacaagtgtgctagattttcaaaa 4245881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 13150141 - 13150048
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcg 102  Q
    ||||| ||||| |||||||||||||||||||| |  |||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||||||    
T  13150141 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggcacggttcagtgtgcctgagttctcg 13150048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 13165334 - 13165246
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||||||||||| ||||| | |||||||||||| ||||||||||||    
T  13165334 ttatcgcgtgatgttgtaacattaatcataacatcgcaaacgttaaaacatcatacagaacgtattaaaacaagtgtgctagaatttca 13165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 11667221 - 11667342
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||| | ||| | ||||||||||||||||||| ||||||||  |||||||||| |||||| ||| ||||  ||||| |||||||||    
T  11667221 gttccaacatgtgtttagacatctctgtaagatgttggatacgatgttccaacatcatggcacagttaagtgtgtctgggttcatgcctatttgtacgcg 11667320  T
Q  117 cgcctgttattgtttaaggaaa 138  Q
      ||  ||||||||||||||||    
T  11667321 gaccctttattgtttaaggaaa 11667342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 24986824 - 24986699
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| | ||||||||||||||| ||| |||||||||||||||| |||||||||| | | ||||   |||| ||||| | |    
T  24986824 gttccaacatgtgtttaggcatctctgtaagatgttggatacaatgttccaacattctggcacggttcagtgtgaccgtgttcatacctatttgtatgtg 24986725  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    | ||  ||||||||||||||||||||    
T  24986724 caccctttattgtttaaggaaacaat 24986699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 4246877 - 4246754
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatac--gatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcg 118  Q
    |||||||||||||| ||||| | |||||||||||||||  ||| ||||||||| ||||||  ||| |||||||||||||||||||||   |||||||| |    
T  4246877 caacatgtgtttagacgtctctgtaagatgttggatacacgatcctccaacatcctggcatggtttagtgtgcctgagttctcgcctgtatgtacgcgtg 4246778  T
Q  119 cctgttattgtttaaggaaacaat 142  Q
     |  ||||||||||||||||||||    
T  4246777 tcctttattgtttaaggaaacaat 4246754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 12753876 - 12753779
Alignment:
Q  42 tataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaac 139  Q
    |||| |||||||||||||||| |||||||| ||||||| |||||||||||||| ||||  |||||||||||||||| |||   ||| |||||||||||    
T  12753876 tatatgatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgggttcgagcctacttgtacgcgcaccttgaattatttaaggaaac 12753779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 26972622 - 26972709
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||  ||||||| ||||||||||||||||| | |||||||  ||||||||| ||||||| |||||||||||||||||||||||||    
T  26972622 ttatcgccggatgttgaaacattaatcgtaacatcg-aaacgttgtaacatcatacagaacatattaaaacaagtgcgctagaatttca 26972709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 1626387 - 1626292
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaac 139  Q
    |||||||||||||| |||| |||||||| |||| |||||||||||||||||  |||  |||||||||||||||||| |  | || |||||||||||    
T  1626387 taagatgttggatatgatgttccaacatcctggaacagttcagtgtgcctggtttcatgcctacttgtacgcgcgctttatcttttttaaggaaac 1626292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 11668092 - 11668171
Alignment:
Q  195 tgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||||||||||| | || ||||||| ||||||| ||||||| || | ||||| |||||||||||||||||||||||||    
T  11668092 tgatgttggaacattgaacggaacattgtaaacgttgaaacatcttaca-aacatattaaaacaagtgcgctagaatttca 11668171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 14746004 - 14746080
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgc 262  Q
    |||||||||||| ||| |||||||||| |||||||||||||  |||||||||||| | ||| | |||||||||||||    
T  14746004 ttatcgcgtgatattgaaacattaatcttaacattgcaaacactaaaacatcatacataacctcttaaaacaagtgc 14746080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 10339478 - 10339553
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||||| ||||||| | | | ||||||||||||||||||| ||||||||  || ||| |||||||||||||    
T  10339478 gttccaacatgt-tttaggcatttctgtaagatgttggatacgatgttccaacatcttgacacggttcagtgtgcct 10339553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 8282731 - 8282685
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||||||||| |||||||| ||| |||||||||||| ||||    
T  8282731 gatgttggatacgatgttccaacatcctgacacagttcagtgagcct 8282685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 25349548 - 25349625
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctga 95  Q
    |||||||||||| ||||||| | | | |||||||||||||| |||  |||||||| ||||||  |||||||||||||||    
T  25349548 gttccaacatgt-tttaggcatttatgtaagatgttggatatgatattccaacatcctggcatggttcagtgtgcctga 25349625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 6e-49; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 24190706 - 24190579
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacg 114  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  24190706 aagttccaacatgtgtttaggcgtctttggaagatgttggatacgatgctccaacattctggcacggttcagtgtgcttgagttctcgcctatttgtacg 24190607  T
Q  115 cgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||  ||||||||||||||||||||    
T  24190606 cgcgccccttattgtttaaggaaacaat 24190579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 22251351 - 22251482
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  |    
T  22251351 gaaccaaagtttcaacatgtgtttaggcgtctttgaaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtt 22251450  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaaca 140  Q
    ||||||||||||  |||| |||||||||||||    
T  22251451 tgtacgcgcgccctttatcgtttaaggaaaca 22251482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 22404071 - 22404204
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| |||||||||||||||||||||||||| |  |||||||||||||| ||| |||||||| ||||||  ||||||| || |||| ||||||| |  |    
T  22404071 gaaccaaagttccaacatgtgtttaggcgtctctggaagatgttggatacaatgttccaacatcctggcatggttcagtatgtctgatttctcgcatgtt 22404170  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||| ||||| |||||||||||||||||||||    
T  22404171 tgtacgtgcgcccgttattgtttaaggaaacaat 22404204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 23419879 - 23420000
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||||| ||||||| ||||| |||| |||||||||||| |   ||||||||||||    
T  23419879 caacatgtgtttaggcgtctctgtaagatgttggatacaatgctccaacatcctggcacggttcaatgtgtctgagttctcgcatgtatgtacgcgcgcc 23419978  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      |||||| |||||||||||||    
T  23419979 ctttattggttaaggaaacaat 23420000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 30605036 - 30605134
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||  || || ||||||| |||||  ||||||||||||||||||||    
T  30605036 taagatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgagttcatgcttatttgtacgggcgccctttattgtttaaggaaacaat 30605134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 23757575 - 23757700
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| |||||||| |||||||  ||||||||| ||  ||||  || ||| ||||||||    
T  23757575 gttccaacatgtgtttaggcatctctatatgatgttggatacgatgttccaacatcctggcacgattcagtgtgtctaggttcatgcatacatgtacgcg 23757674  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    | ||  ||||||||||||||||||||    
T  23757675 caccctttattgtttaaggaaacaat 23757700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 23823031 - 23823156
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| |||||||| |||||||  ||||||||| ||  ||||  || ||| ||||||||    
T  23823031 gttccaacatgtgtttaggcatctctatatgatgttggatacgatgttccaacatcctggcacgattcagtgtgtctaggttcatgcatacatgtacgcg 23823130  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    | ||  ||||||||||||||||||||    
T  23823131 caccctttattgtttaaggaaacaat 23823156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 25105644 - 25105732
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||| ||||||||| |||||||||||||||||||||||||    ||||||||| ||||||| |||||||||||||||||||||||||    
T  25105644 ttatcgtgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgcgctagaatttca 25105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 25164737 - 25164825
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||| ||||||||| |||||||||||||||||||||||||    ||||||||| ||||||| |||||||||||||||||||||||||    
T  25164737 ttatcgtgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgcgctagaatttca 25164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 9421868 - 9421959
Alignment:
Q  51 ttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||||||||| |||||||| || |||| |||||||| ||||| ||||  |||||||||||||||||||  ||||||||||||||||||||    
T  9421868 ttggatacgatgttccaacatcctagcacggttcagtgagcctgggttcatgcctacttgtacgcgcgccccttattgtttaaggaaacaat 9421959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 22082036 - 22082134
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||  || |  ||||||| |||||  ||||||||||||||||||||    
T  22082036 taagatgttggatacgatgttccaacatcctggcacggttcagtgtgcttgagttcatgcatgtttgtacgtgcgccctttattgtttaaggaaacaat 22082134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 22404984 - 22405073
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||||| |||||||| ||||||||||||||||||||||| | | |||||||||| | ||| | |||||||||||| |||||||||||||    
T  22404984 ttatcgcatgatgttgaaacattaatcgtaacattgcaaatgctgaaacatcatacataacctattaaaacaagtgtgctagaatttcaa 22405073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 9422697 - 9422778
Alignment:
Q  194 gtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||| ||| || ||||||||||| |||||||||||  | ||||||| ||||||||||||| |||||||||||    
T  9422697 gtgatgttggaacactaaacggaacattgcaaatgttaaaacatctgacagaacatattaaaacaagtgcactagaatttca 9422778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 26037614 - 26037494
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||| ||| | |||||||| |||||||||| |||||||| ||||||  |||||||||||||  ||||  || || |||  ||||| ||    
T  26037614 caacatgtgtttaggcatctctgtaagatgtcggatacgatgttccaacatcctggcatggttcagtgtgcctcggttcatgcatatttg-gcgcgcacc 26037516  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  26037515 ctttattgtttaaggaaacaat 26037494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 23624655 - 23624607
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  23624655 taagatgttggatacgatgttccaacatcctggcacggttcagtgtgcc 23624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 22245722 - 22245800
Alignment:
Q  62 gctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaaca 140  Q
    |||||||||| ||||||| |||||||||||| |||||||||| |  |||||| |||||   ||||| ||||||||||||    
T  22245722 gctccaacatcctggcacggttcagtgtgcccgagttctcgcttgtttgtacccgcgcactttattctttaaggaaaca 22245800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 23420780 - 23420834
Alignment:
Q  183 ctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacat 237  Q
    |||||||||| |||||| || ||||||||||||||||||| |||||| |||||||    
T  23420780 ctgcttatcgtgtgatgatgaaacattaatcgtaacattgtaaacgtcaaaacat 23420834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 20714062 - 20714137
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||||| || |||| ||| ||||||||||| ||||||||| |||||||| |||| || ||| |||||||||    
T  20714062 gttccaacatgt-ttcaggcatctctataagatgttagatacgatgttccaacatcctggaacggtttagtgtgcct 20714137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 38406177 - 38406077
Alignment:
Q  42 tataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaa 141  Q
    ||||||||||||||||||||| |||| ||| || |||| ||||||||||||     ||| || |  ||||||||| |||  |||||||||||||||||||    
T  38406177 tataagatgttggatacgatgttccagcatcctagcacggttcagtgtgccctgtatcttgcttgtttgtacgcgtgccctttattgtttaaggaaacaa 38406078  T
Q  142 t 142  Q
    |    
T  38406077 t 38406077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 9420671 - 9420712
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggat 56  Q
    |||||||||||||||||||||| ||| | |||||||||||||    
T  9420671 aagttccaacatgtgtttaggcatctctgtaagatgttggat 9420712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 22240288 - 22240345
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctcc 66  Q
    ||||| ||||| ||||||||||||||| |||| |  ||||||||| ||||||||||||    
T  22240288 gaaccaaagtttcaacatgtgtttaggtgtctctgaaagatgttgaatacgatgctcc 22240345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 1690 - 1811
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  1690 caacatgtgtttaggcgtctttgtaagatgttggatacgatgttccaacattctggcacggttcagtgtgcctgagttctcgcctatttgtatgcgcgcc 1789  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  1790 ctttattgtttaaggaaacaat 1811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 2e-45; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 17235435 - 17235310
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |  |||||||||    
T  17235435 gttccaacatgtgtttaggcgtctctgtaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcctgagttctcgcatgtttgtacgcg 17235336  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    |||| |||||||||||||||||||||    
T  17235335 cgcccgttattgtttaaggaaacaat 17235310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 33666628 - 33666507
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  || ||||||| ||    
T  33666628 caacatgtgtttaggcgtctttggaagatgttggatatgatgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttttacgcgcacc 33666529  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  33666528 ctttattgtttaaggaaacaat 33666507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 23879734 - 23879601
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||  |    
T  23879734 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcctgagttttcacctgtt 23879635  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||| ||| ||  ||||||||||||||||||||    
T  23879634 tgtacacgcaccctttattgtttaaggaaacaat 23879601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 8464985 - 8465110
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||| ||||||| ||| |||||||||| ||||   ||||||||||||||    
T  8464985 gttccaacatgtgtttaggcctctttttaagatgttggatacaatgttccaacatcctggcacggtttagtgtgcctgggttcattcctacttgtacgcg 8465084  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  |||||||||||| |||||||    
T  8465085 cgccctttattgtttaagaaaacaat 8465110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 9281020 - 9281153
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  ||||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||  |    
T  9281020 gaaccaaagtttcaacatgtgtttaggcgtctctgaaagatgttggatatgatgctccaacatcctggcacgattcagtgtgcctgagttctcgcctgtt 9281119  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||| ||||||  | |||||||||| |||||||    
T  9281120 tgtacacgcgcccttcattgtttaagaaaacaat 9281153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 13196165 - 13196040
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| ||||  |||||||||||   |    
T  13196165 gttccaacatgtgtttagacatctctataagatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgggttcatgcctacttgtatatg 13196066  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  13196065 cgccctttattgtttaaggaaacaat 13196040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 25970518 - 25970393
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||||||||  |||||| |||||||||||||||||| || |||  |||| || |    
T  25970518 gttccaacatgtgtttaggcgtctctgtaagatgttggatatgatgctccaacatcttggcacggttcagtgtgcctgagttgtcacctgtttgtgcgtg 25970419  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  25970418 cgccctttattgtttaaggaaacaat 25970393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 25974958 - 25974833
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||||||||  |||||| |||||||||||||||||| || |||  |||| || |    
T  25974958 gttccaacatgtgtttaggcgtctctgtaagatgttggatatgatgctccaacatcttggcacggttcagtgtgcctgagttgtcacctgtttgtgcgtg 25974859  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  25974858 cgccctttattgtttaaggaaacaat 25974833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 19077984 - 19077859
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||  |||||| |||||||||||||||| ||  |||||| |||||| |    
T  19077984 gttccaacatgtgtttaggcatgtttgtaagatgttggatacgatgttccaacatcttggcacggttcagtgtgcctgagctcatgcctacatgtacgtg 19077885  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  | ||||||||||||||||||    
T  19077884 cgcccttcattgtttaaggaaacaat 19077859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 14258851 - 14258759
Alignment:
Q  183 ctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| || |||||||    
T  14258851 ctgcttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgttaaaacatcataaaaaacatattaaaacaagtgcgttaaaatttca 14258759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 13870518 - 13870611
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaaagg 279  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||||| ||||    
T  13870518 ttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgctgaaacatcattcagaacatattaaaacaagtgcgctagaatttcataagg 13870611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 19168287 - 19168166
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| ||||  ||||||| |||||||||||||||| ||||||| ||| |||||||||| ||||  |||||||||||||||    
T  19168287 gttccaacatgtgtttaggcatctctatagaatgttgggtacgatgctccaacatcctggcacggtttagtgtgcctgggttcatgcctacttgtacgcg 19168188  T
Q  117 cgcctgttattgtttaaggaaa 138  Q
    ||    ||||||||||||||||    
T  19168187 cgttctttattgtttaaggaaa 19168166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 20653910 - 20653785
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| |||||||||||||||  |||| ||||| || |||| || |||||||||| ||| ||||  |||||||| ||||||    
T  20653910 gttccaacatgtgtttaggcatctctataagatgttggatgtgatgttccaagatcctggaacggttcagtgtgtctgggttcatgcctacttttacgcg 20653811  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  20653810 cgccctttattgtttaaggaaacaat 20653785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 8465896 - 8465975
Alignment:
Q  193 cgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatt 271  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8465896 cgtgatgttggaacattgaacggaacattgcaaacgttaaaacatcatatagaacatattaaaacaagtgcgctagaatt 8465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 17856038 - 17855911
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacg 114  Q
    |||||||||||| ||||||||||||| |  |||||||||||| ||||||| |||||| || |||| |||||||||||||||||||| || |  |||||||    
T  17856038 aagttccaacatttgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctagcacggttcagtgtgcctgagttcttgcttgtttgtacg 17855939  T
Q  115 cgcgcctgttattgtttaaggaaacaat 142  Q
     || ||  ||||||||||||||||||||    
T  17855938 tgcaccctttattgtttaaggaaacaat 17855911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 13869724 - 13869845
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||| ||||| ||||||||||||| | ||  |||||||| ||||||| ||||||||||| ||||||||||||||  |||||| || ||    
T  13869724 caacatgtgtttaggcatctttgtaagatgttggatgcaattttccaacatcctggcacggttcagtgtgcttgagttctcgcctatatgtacgtgcacc 13869823  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      |||||||||||||| |||||    
T  13869824 ctttattgtttaaggacacaat 13869845  T

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Target: chr6; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 19893990 - 19894111
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||| ||| |  |||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||  |||| ||| || |    
T  19893990 caacatgtgtttaggcatctctggaagatgttggatacgatgctccaacatcttggcacggttcagtgtgcctgaattctcgcctttttgtgcgcacgac 19894089  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      |||||| |||||||||||||    
T  19894090 ctttattgcttaaggaaacaat 19894111  T

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Target: chr6; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 21722718 - 21722850
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||||||||||||| ||||||  || | ||||||||||||||| ||| |||||||| ||||||  |||||||||||||| ||||| |||||      
T  21722718 gaaccaaagttccaacatgtggttaggcaactctgtaagatgttggatacaatgttccaacatcctggcatggttcagtgtgcctgggttcttgcctata 21722817  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||| ||||||||  ||||||||||||||||||||    
T  21722818 tgt-cgcgcgccctttattgtttaaggaaacaat 21722850  T

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Target: chr6; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 20558239 - 20558151
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||    
T  20558239 ttatcgcgtgatgttggaacattgaacgtaacatcgcaaacgttaaaacatcatacataacatattaaaacaagtgcgctcgaatttca 20558151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 20989986 - 20990077
Alignment:
Q  186 cttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaa 276  Q
    ||||||| |||||||||||||||| |||| ||||||||||| | |||||||||||| ||||||| |||||||||||| ||||||||||||||    
T  20989986 cttatcgtgtgatgttggaacattgatcggaacattgcaaatgctaaaacatcatacagaacatattaaaacaagtgagctagaatttcaaa 20990077  T

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Target: chr6; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 12039028 - 12039142
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| | ||||||||||||| | ||| ||||||||  |||||| |||||||||| ||| ||||  |||||||| ||||||    
T  12039028 gttccaacatgtgtttaggcatctctgtaagatgttggatgcaatgttccaacatcttggcacggttcagtgtgtctgggttcatgcctacttttacgcg 12039127  T
Q  117 cgcctgttattgttt 131  Q
    ||||  |||||||||    
T  12039128 cgccctttattgttt 12039142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 19077490 - 19077412
Alignment:
Q  198 tgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||||||| |||||||||||||||| ||||||| |||||| ||||||| ||||||||||||| ||||||||||||    
T  19077490 tgttggaacattgatcgtaacattgcaaatgttaaaatatcatacagaacatattaaaacaagtgcactagaatttcaa 19077412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 12039904 - 12039993
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||| |||||| |||||||||| | || ||||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||    
T  12039904 ttatctcgtgatattggaacattgaacgaaacattgcaaacgttaaaacatcgtgtagaacatattaaaacaagtgtgctagaatttcaa 12039993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 19172248 - 19172133
Alignment:
Q  24 catgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgt 123  Q
    |||||||||| || ||| ||||||||||||| || ||||||||||||| ||||||| ||||| || ||||  ||||  | |||||||||||||||||  |    
T  19172248 catgtgtttatgcatctctataagatgttgggtatgatgctccaacatcctggcacggttcaatgagcctaggttcatg-ctacttgtacgcgcgccctt 19172150  T
Q  124 tattgtttaaggaaaca 140  Q
    |||||||||||||||||    
T  19172149 tattgtttaaggaaaca 19172133  T

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Target: chr6; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 17855131 - 17855040
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaaa 277  Q
    |||||| ||||||||| ||||||||||||||||| |||||  ||||||||||||| | ||| | |||||||||||| |||||||||||||||    
T  17855131 ttatcgtgtgatgttgaaacattaatcgtaacatcgcaaatattaaaacatcatacaaaacgtattaaaacaagtgtgctagaatttcaaaa 17855040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 20989106 - 20989233
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacg 114  Q
    |||||||||||||||||||||| ||| | |||||| |||||||||||| || ||||| ||  ||| |||||||||| ||  ||||  |||||||||||||    
T  20989106 aagttccaacatgtgtttaggcatctatgtaagatattggatacgatgttcaaacatcctcacacggttcagtgtgtcttggttcatgcctacttgtacg 20989205  T
Q  115 cgcgcctgttattgtttaaggaaacaat 142  Q
     ||||   ||||||| ||||||||||||    
T  20989206 agcgcgctttattgtataaggaaacaat 20989233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 33665730 - 33665639
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaaa 277  Q
    |||||| ||||||||  ||||||||||||||||||||||||     ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  33665730 ttatcgtgtgatgttaaaacattaatcgtaacattgcaaacaccgtaacatcatacagaacatattaaaacaagtgcgctagaatttcaaaa 33665639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 12385177 - 12385258
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttc 99  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||| |||||||| ||||||| |||||||||||||| ||||    
T  12385177 gttccaacatgt-tttaggcatctctgtaagatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgggttc 12385258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 17527230 - 17527327
Alignment:
Q  45 aagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||||||||||||| |||| || ||||||| ||||||||||| |||||||||||||  ||  || ||||||  |||||||||||| |||||||    
T  17527230 aagatgttggatacgatgccccaatatcctggcacggttcagtgtgcttgagttctcgcctgtttccacacgcgccctttattgtttaagtaaacaat 17527327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 19894735 - 19894820
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatt 271  Q
    ||||||| |||||||| |||||||||||||| ||| ||||||||  ||||||||| ||||||| |||||||||||| |||||||||    
T  19894735 ttatcgcatgatgttgaaacattaatcgtaatattacaaacgttgtaacatcatacagaacatattaaaacaagtgtgctagaatt 19894820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 21705840 - 21705973
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||||||||||||| ||||||  || ||||||||||||||||| ||| ||||| ||  |||||   ||||||||||||| ||||| |||||      
T  21705840 gaaccaaagttccaacatgtggttaggcaactctataagatgttggatacaatgttccaatatcttggcatgcttcagtgtgcctgggttcttgcctata 21705939  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    | || |||||||  |||||||||||| |||||||    
T  21705940 tttatgcgcgccctttattgtttaagtaaacaat 21705973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 9281931 - 9282019
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||| ||||||||||||||| | | |||||||| |||| ||||||||||||| | ||| | |||||||||||||||||||||||||    
T  9281931 ttatcgcttgatgttggaacattgaacttaacattgaaaactttaaaacatcatacataacgtattaaaacaagtgcgctagaatttca 9282019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 13195260 - 13195172
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||||   ||||| |||||||| ||| ||||||||||||    
T  13195260 ttattgcgtgatgttgaaacattaattgtaacattgcaaacgctaaaacatcataccaaacatattaaaacacgtgtgctagaatttca 13195172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 24542465 - 24542373
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaac 139  Q
    |||||||||||||||| |||||||||||||||| ||| ||| |||||| ||||  |||||||||||| ||| |||  |||| |||||||||||    
T  24542465 gatgttggatacgatgttccaacattctggcacggtttagtatgcctgggttcatgcctacttgtacacgcacctagtattatttaaggaaac 24542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 17863792 - 17863917
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| | |||||||| ||||| |||| |  |||||  | |||| ||||||  |||||| ||||  ||||| ||||||| |    
T  17863792 gttccaacatgtgtttaggcatctctgtaagatgtcggatatgatgttttaacatcgtagcacggttcagactgcctgggttcatgcctatttgtacgtg 17863891  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  17863892 cgccctttattgtttaaggaaacaat 17863917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 25948465 - 25948377
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| ||||||||||||| ||||||||||| | ||||| |||| | ||  | |||||||||||| ||||||||||||    
T  25948465 ttatcgcgtgatgttgaaacattaatcgtatcattgcaaacgctgaaacaacatacataatgtattaaaacaagtgtgctagaatttca 25948377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 23882029 - 23882092
Alignment:
Q  30 tttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||| ||||| ||||||||||||||||||| |||||||| ||| ||| |||||||||||||    
T  23882029 tttaggcatctttgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtgcct 23882092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 274
Target Start/End: Original strand, 34991214 - 34991293
Alignment:
Q  196 gatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| || ||||||||| ||||||||||||   | ||||||| |||||| ||||||||||||||||||    
T  34991214 gatgttggaacattaaacggaacattgcagacgttaaaacatatgacagaacatattaaaataagtgcgctagaatttca 34991293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 20465231 - 20465285
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacat 71  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||    
T  20465231 gttccaacatgtgtttaggcatctctataagatgttggatatgatgttccaacat 20465285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 19100718 - 19100673
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggatacga 60  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  19100718 aagttccaacatgtgtttaggcatctctataagatgttggatacga 19100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 17234528 - 17234440
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||| |||||||||| || |||||||||||||||||||| |   |||||||||| | || || |||||||||||| ||||||||||||    
T  17234528 ttatcacgtgatgttgaaatattaatcgtaacattgcaaatgccgaaacatcatacataatatattaaaacaagtgtgctagaatttca 17234440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 275
Target Start/End: Original strand, 17864640 - 17864723
Alignment:
Q  193 cgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||||| |||||| | ||  |||||| ||||||| ||||||| || | ||||| ||||||||||||||||||||||||||    
T  17864640 cgtgatgttgcaacattgaacggtacattgtaaacgttgaaacatcttacataacatattaaaacaagtgcgctagaatttcaa 17864723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 21717767 - 21717818
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatc 238  Q
    ||||| ||||||||||||||||||| || |||||||||||| ||||||||||    
T  21717767 ttatcacgtgatgttggaacattaaacggaacattgcaaacattaaaacatc 21717818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 21725603 - 21725654
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatc 238  Q
    ||||| ||||||||||||||||||| || |||||||||||| ||||||||||    
T  21725603 ttatcacgtgatgttggaacattaaacggaacattgcaaacattaaaacatc 21725654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 25806222 - 25806167
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttc 99  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| ||| ||||    
T  25806222 taagatgttggatacgatgttccaacatcctggcacggttcagtgtgtctgggttc 25806167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 15930193 - 15930242
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||| |||||||||||| |||||||| ||||||| |||||||||||||    
T  15930193 taagatattggatacgatgttccaacatcctggcacggttcagtgtgcct 15930242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 19598495 - 19598446
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||||||| |||||||| ||| ||| |||||||||||||    
T  19598495 taagatgttggatacgatgttccaacatcctgacacggttcagtgtgcct 19598446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 15897896 - 15897984
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| ||| || | |  ||||||||| ||||||||||||| || | ||||| |||||||||||| | ||||||||||    
T  15897896 ttatcgcgtgatgttgaaaccttgaacaaaacattgcatacgttaaaacatcgtacataacatattaaaacaagtgtgttagaatttca 15897984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 25805381 - 25805301
Alignment:
Q  196 gatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||||| |||||| | || ||||||  ||||| | |||||||||| ||||||| |||||||||||||| |||||||||||    
T  25805381 gatgttgaaacattgaacgaaacattataaacgcttaaacatcatacagaacatattaaaacaagtgcgatagaatttcaa 25805301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 26964900 - 26964947
Alignment:
Q  46 agatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||||| |||| |||||||||||| ||| |||||||||||||    
T  26964900 agatgttggatatgatgttccaacattctgacacggttcagtgtgcct 26964947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 21316941 - 21316986
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    ||||||||||| |||| |||||||| |||||| |||||||||||||    
T  21316941 gatgttggatatgatgttccaacatcctggcatagttcagtgtgcc 21316986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 34639555 - 34639600
Alignment:
Q  48 atgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||| ||||||||  |||||| |||||||||||||    
T  34639555 atgttggatacgatgttccaacatcttggcacggttcagtgtgcct 34639600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 1e-40; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 16384731 - 16384606
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||  |||||||||    
T  16384731 gttccaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctgacacagttcagtgtgcctgggttctcgcctgtttgtacgcg 16384632  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  16384631 cgccctttattgtttaaggaaacaat 16384606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 18600982 - 18601103
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||||| | |||||    
T  18600982 caacatgtgtttaggcgtctgtggaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcctgagttctcgcctggttgtatgtgcgcc 18601081  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  18601082 ctttattgtttaaggaaacaat 18601103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 23399506 - 23399639
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  |||||||||||| ||||||| |||||| ||||||| ||| ||||||||||||||||||| |  |    
T  23399506 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggcacggtttagtgtgcctgagttctcgcttgtt 23399605  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||||||  ||||| ||||||||||||||    
T  23399606 tgtacgcgcgccctttattatttaaggaaacaat 23399639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 25117705 - 25117572
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||| ||||||||||| |  ||||||||||||||||||||||||||| |||||||  |||||  ||| |||||||||||||| |    
T  25117705 gaaccaaagtttcaacatgtatttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacgcttcaggttgcatgagttctcgcctatt 25117606  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||||||||   ||||||||||||||||||||    
T  25117605 tgtacgcgcgctctttattgtttaaggaaacaat 25117572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 33898331 - 33898452
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||| || | || ||||||| |||||| ||||||||||   ||||||||||||    
T  33898331 caacatgtgtttaggcgtctttggaagatgttagatacgatgctccaacatcctcgtacggttcagtatgcctgcgttctcgcctgtatgtacgcgcgcc 33898430  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  33898431 ctttattgtttaaggaaacaat 33898452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 16383826 - 16383737
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||||||||||| |||||||||||||||||| ||||||  | |||||| || ||||||| ||||||||||||||||||||||||||    
T  16383826 ttatcgcgtgatgttgaaacattaatcgtaacattacaaacgccataacatcttacagaacatattaaaacaagtgcgctagaatttcaa 16383737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 10190823 - 10190735
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||| |||||||| |||||||||| |||||||||||| | | |||||||||| ||||||| |||||||||||||||||||||||||    
T  10190823 ttatcgcttgatgttgaaacattaatcttaacattgcaaatgctgaaacatcatacagaacatattaaaacaagtgcgctagaatttca 10190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 8163719 - 8163630
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||||||||||||||||||||| | ||||||||   |||||||||||||||||| | ||| | ||||||||||||||||||||||||||    
T  8163719 ttatcgcgtgatgttggaacattgaacgtaacatcataaacgttaaaacatcatacataacgtattaaaacaagtgcgctagaatttcaa 8163630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 28020146 - 28020023
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacg 114  Q
    ||||| |||||||||||||||||||| |  ||||||||||||  |||||| |||||| ||||||| ||||||||||  ||||||||| | |  |||| ||    
T  28020146 aagtttcaacatgtgtttaggcgtctctggaagatgttggatgtgatgcttcaacatcctggcacggttcagtgtgaatgagttctcacatgtttgttcg 28020047  T
Q  115 cgcgcctgttattgtttaaggaaa 138  Q
    || |||  ||||||||||||||||    
T  28020046 cgagccctttattgtttaaggaaa 28020023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 33899405 - 33899491
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaattt 272  Q
    |||||||||||||||  |||||||||| |||||||||||||| | |||||||||| ||||| | |||||||||||| ||||||||||    
T  33899405 ttatcgcgtgatgttaaaacattaatcataacattgcaaacgctgaaacatcatacagaacctattaaaacaagtgtgctagaattt 33899491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 21478045 - 21477957
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||||||||||||||||||| |  || ||||  ||||| ||||||||||||| ||||| | |||||||||||||||||||||||||    
T  21478045 ttatcgcgtgatgttggaacattgaatgtgacatcacaaacattaaaacatcatacagaacgtattaaaacaagtgcgctagaatttca 21477957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 25116760 - 25116672
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| ||||||||||||||||||| ||| | | |||||| ||| ||||| | |||||||||||| ||||||||||||    
T  25116760 ttatcgcgtgatgttgaaacattaatcgtaacattgtaaatgctgaaacattatacagaacgtattaaaacaagtgtgctagaatttca 25116672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 10725038 - 10724964
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgc 91  Q
    |||||||||| ||| ||||| ||| | ||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  10725038 gttccaacatatgtgtaggcatctctgtaagatgttggatacgatgttccaacatcctggcacagtttagtgtgc 10724964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 10938807 - 10938733
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgc 91  Q
    |||||||||| ||| ||||| ||| | ||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  10938807 gttccaacatatgtgtaggcatctctgtaagatgttggatacgatgttccaacatcctggcacagtttagtgtgc 10938733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 15162718 - 15162798
Alignment:
Q  195 tgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||| || | ||||| |||||||||||  ||||||||||||    
T  15162718 tgatgttggaacattaatcgaaacatcgcaaacgttgaaacatcttacataacatattaaaacaagtatgctagaatttca 15162798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 9069758 - 9069684
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcg 118  Q
    ||||||||||||||||||| |||||||| |||| || ||||||||||||||| |||  ||||| |||||| ||||    
T  9069758 taagatgttggatacgatgttccaacatcctggaacggttcagtgtgcctgatttcatgcctatttgtactcgcg 9069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 10724189 - 10724107
Alignment:
Q  194 gtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||||||||||| | || |||||| |||||| ||||||||| || | ||||| |||||||||||||| |||||||||||    
T  10724189 gtgatgttggaacattgaacggaacattccaaacggtaaaacatcttacaaaacatattaaaacaagtgcgttagaatttcaa 10724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 10937958 - 10937876
Alignment:
Q  194 gtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||||||||||| | || |||||| |||||| ||||||||| || | ||||| |||||||||||||| |||||||||||    
T  10937958 gtgatgttggaacattgaacggaacattccaaacggtaaaacatcttacaaaacatattaaaacaagtgcgttagaatttcaa 10937876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 15699680 - 15699729
Alignment:
Q  43 ataagatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  15699680 ataagatgttggatccgatgttccaacatcctggcacagttcagtgtgcc 15699729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 19183001 - 19183124
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgt--gcctgagttctcgcctacttgtacg 114  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||| ||  |||| ||||||| |||||||||  || |||||||  ||||| ||||||     
T  19183001 gttccaacatgt-tttaggcatctctgtaagatgttggatacgatgttctgacatcctggcacggttcagtgtgcgcatgagttcatgcctatttgtaca 19183099  T
Q  115 cgcgcctgttattgtttaaggaaac 139  Q
    |||||   ||||| |||||||||||    
T  19183100 cgcgctctttattatttaaggaaac 19183124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 28019240 - 28019198
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgt 229  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  28019240 ttatcgcgtgatgttgaaacattaatcgtaacattacaaacgt 28019198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 15161821 - 15161866
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatg 62  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||    
T  15161821 gttccaacatgtgtttaggcatctctgtaagatgttggatacgatg 15161866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 15161866 - 15161927
Alignment:
Q  81 gttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||||||||||| ||||  ||||| |||||| ||||||  ||||||||||||||||||||    
T  15161866 gttcagtgtgcctgggttcaagcctatttgtacacgcgccctttattgtttaaggaaacaat 15161927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 33746731 - 33746638
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttca-gtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaac 139  Q
    |||||||||||||||| || ||||| ||||| | ||||| ||||| ||| ||||  ||||||||||| ||||||||  |||| |||||||||||    
T  33746731 gatgttggatacgatgttctaacatcctggcgcggttcaagtgtgtctgggttcatgcctacttgtatgcgcgccttgtattatttaaggaaac 33746638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 10718285 - 10718241
Alignment:
Q  48 atgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||    
T  10718285 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 10718241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 10932054 - 10932010
Alignment:
Q  48 atgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||    
T  10932054 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 10932010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 23400411 - 23400499
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||| |||||||||| |||||||||| ||||||| |||| |    ||||||||| ||| ||| |||||||||||| ||||||||||||    
T  23400411 ttatcacgtgatgttgaaacattaatcataacattacaaatgccgtaacatcatacagagcatattaaaacaagtgtgctagaatttca 23400499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 15623274 - 15623201
Alignment:
Q  19 tccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||| ||||||| | | | ||||||||||||||||||| |||||||| ||||||| ||| ||| |||||    
T  15623274 tccaacatgt-tttaggcatttctgtaagatgttggatacgatgttccaacatcctggcacggttaagtatgcct 15623201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 19660255 - 19660156
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    ||||||||||| |||||||| ||  ||| |||| |||||||  ||| ||||||||  |||||  |||||||||||||||||||  ||||| |||||||||    
T  19660255 gttccaacatg-gtttaggcatccatatgagat-ttggatagaatgttccaacatcgtggcatggttcagtgtgcctgagttcatgcctatttgtacgcg 19660158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 31971725 - 31971680
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    ||||||| |||||||| |||||||| || |||||||||||||||||    
T  31971725 gatgttgtatacgatgttccaacatcctagcacagttcagtgtgcc 31971680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 3e-38; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 7028381 - 7028514
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| |||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||| |    
T  7028381 gaaccaaagtgccaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacattttggcacggttcagtgtgactgagttctcgcctatt 7028480  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||| |||||  ||||| ||||||||||||||    
T  7028481 tgtacgtgcgccctttattatttaaggaaacaat 7028514  T

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Target: chr3; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 17135455 - 17135588
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  ||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||       
T  17135455 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatatgatgctccaacatcctggcacggttcggtgtgcctgagttctcgcctcta 17135554  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||||||| ||||||||||||||||||||    
T  17135555 tgtacgcgcgccttttattgtttaaggaaacaat 17135588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 18482683 - 18482816
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||||||| |||||||||||||||| | ||||||||||||||||||| | |||||| ||| ||| |||||||||| ||||||||||||||  |    
T  18482683 gaaccaaagttccaatatgtgtttaggcgtctctgtaagatgttggatacgatgtttcaacatcctgacacggttcagtgtgtctgagttctcgcctgtt 18482782  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||| ||  ||||||||||||||||||||    
T  18482783 tgtacgcgcaccctttattgtttaaggaaacaat 18482816  T

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Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 24196374 - 24196241
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  |||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||  |    
T  24196374 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggcacggttcagtgtgcctgagttctcgcctgtt 24196275  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||| ||||  |  ||||||||||||||||||||    
T  24196274 tgtatgcgcatcctttattgtttaaggaaacaat 24196241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 13514936 - 13515062
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagtt-ctcgcctacttgtacgc 115  Q
    ||||||||||||||||| || ||| | ||||||||||||||||||| |||||||| || |||| ||||||||||| |||||| || |||||||||| ||     
T  13514936 gttccaacatgtgtttaagcatctctgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtgcttgagttacttgcctacttgtgcgt 13515035  T
Q  116 gcgcctgttattgtttaaggaaacaat 142  Q
    |||||  ||||||||||||||||||||    
T  13515036 gcgccctttattgtttaaggaaacaat 13515062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 13791514 - 13791393
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||| ||||| |  |||||||||||||| ||||| |||||| ||| ||  ||||| |||||||||||||||||||  |||||||||||||    
T  13791514 caacatgtgtttagacgtctctggaagatgttggatacaatgcttcaacatcctgacatggttcaatgtgcctgagttctcgcctgtttgtacgcgcgcc 13791415  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  13791414 ctttattgtttaaggaaacaat 13791393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 20748384 - 20748473
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  20748384 ttatcgcgtgatgttggaacattgaacgtaacatcgcaaacgttaaaacatcatacaaaacatattaaaacaagtgcgctagaatttcaa 20748473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 1918554 - 1918687
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| ||||||||||||||  |||| |  ||||||||| || ||||||| |||||| || |||| ||||||||||||||||||||||| |  |    
T  1918554 gaaccaaagtttcaacatgtgtttagaggtctctggaagatgttgtatgcgatgcttcaacatcctagcacggttcagtgtgcctgagttctcgcatgtt 1918653  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||| |||||  ||||||||||||||||||||    
T  1918654 tgtacgtgcgccctttattgtttaaggaaacaat 1918687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 23953868 - 23954001
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||| ||||||||||||||| |  |||||||| ||||| || ||||||||| || |||| ||||||||||||||||||||||| |  |    
T  23953868 gaaccaaagtttcaacgtgtgtttaggcgtctctggaagatgttagatacaatcctccaacatcctagcacggttcagtgtgcctgagttctcgcttgtt 23953967  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    | |||| |||||  ||||||||||||||||||||    
T  23953968 tatacgtgcgccctttattgtttaaggaaacaat 23954001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 44452417 - 44452329
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||  | ||||||| |||||||||||||||||||||||||    
T  44452417 ttatcacgtgatgttggaacattaaacgaaacattgcaaacgttaaaacatctgacagaacatattaaaacaagtgcgctagaatttca 44452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 18063539 - 18063650
Alignment:
Q  31 ttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtt 130  Q
    |||||| ||||| ||||||||||||||||| | |||||||| ||||||| |||||||||||||  ||||| |||||  |||||| |||||| | ||||||    
T  18063539 ttaggcatctttgtaagatgttggatacgacgttccaacatcctggcacggttcagtgtgccttggttcttgcctatatgtacgtgcgcctttcattgtt 18063638  T
Q  131 taaggaaacaat 142  Q
    ||||||||||||    
T  18063639 taaggaaacaat 18063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 20626961 - 20627086
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| | |||||| |||||||| ||| |||||||| ||||||| ||| |||||| ||| ||||  ||||||||||| |      
T  20626961 gttccaacatgtgtttaggcatctctgtaagatattggatacaatgttccaacatcctggcacggtttagtgtgtctgggttcatgcctacttgtatgta 20627060  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  20627061 cgccctttattgtttaaggaaacaat 20627086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 13790616 - 13790528
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| |||||||||||||||||||||||||    ||||||||| ||||||| |||||||||||| ||||||||||||    
T  13790616 ttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaaacaagtgtgctagaatttca 13790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 19633824 - 19633736
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  | ||||| ||||||||||| |||||||||||||    
T  19633824 ttatcgcatgatgttggaacattgaacgtaacattgcaaacgttaaaacatcatgcaaaacatattaaaacaagtacgctagaatttca 19633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 15572331 - 15572446
Alignment:
Q  27 gtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttat 126  Q
    |||||||||||||| | ||||||||||||||| | |||| |||||  |||||  |||||||||||||||||| ||| ||| |||||||| | ||  ||||    
T  15572331 gtgtttaggcgtctctgtaagatgttggatacaacgctctaacatgttggcaaggttcagtgtgcctgagttatcggctatttgtacgcacaccctttat 15572430  T
Q  127 tgtttaaggaaacaat 142  Q
    ||||||||||||||||    
T  15572431 tgtttaaggaaacaat 15572446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 15636095 - 15636186
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaaa 277  Q
    |||||||||||||||| ||||||||||||| ||||| ||||| |||||||||| | ||||| | |||||||||||| |||||||||||||||    
T  15636095 ttatcgcgtgatgttgaaacattaatcgtagcattgaaaacgctaaaacatcaaacagaacgtattaaaacaagtgtgctagaatttcaaaa 15636186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 21547624 - 21547542
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttc 99  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||| |||||| | ||| |||||||||||||| ||||||||    
T  21547624 gttccaacatgtgtttatgcatctctataagatgttggatacgatgttccaacttcctgacacagttcagtgtgtctgagttc 21547542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 1919457 - 1919546
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||||||||||| ||||||||| |||||||||||||||   ||||| |||| ||||| | ||||||||||||||||||||||||||    
T  1919457 ttatcgcgtgatgttgaaacattaattgtaacattgcaaacgcggaaacaacatacagaacgtattaaaacaagtgcgctagaatttcaa 1919546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 19532105 - 19532193
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| |||||| |||||||||||| ||||| |  ||||||||||||||||| |||||||||||| ||||||| ||||    
T  19532105 ttatcgcgtgatgttgaaacattgatcgtaacattgaaaacgctgtaacatcatatagaacatattaaaacaagtgtgctagaaattca 19532193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 19634692 - 19634594
Alignment:
Q  45 aagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcct-acttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||| |||||| ||||||||||||  ||||||| ||||||||||||||||||||| |||   ||||||| ||||| ||||||||||  |||||||||    
T  19634692 aagatgctggatatgatgctccaacaacctggcacggttcagtgtgcctgagttctcacctggtttgtacgtgcgcccgttattgttttcggaaacaat 19634594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 28051979 - 28051917
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcac 79  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||| |||||||| |||||||    
T  28051979 gttccaacatgtgtttaggcatctctgtaagatgttggatacgatgttccaacatcctggcac 28051917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 296235 - 296157
Alignment:
Q  64 tccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||| || ||||||| |||||||||||||| ||||  || || ||||||| |||||  ||||||||||||||||||||    
T  296235 tccaaaatcctggcacggttcagtgtgcctgggttcatgcatatttgtacgtgcgccctttattgtttaaggaaacaat 296157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 286219 - 286291
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtg 90  Q
    |||||||||||| || |||| ||| | ||||||||||||||||||| |||||||| || |||| ||||||||||    
T  286219 gttccaacatgt-ttcaggcatctctgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtg 286291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 15674183 - 15674231
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||||||||  |||||||  |||||||||||||||||||    
T  15674183 taagatgttggatacgatgtcccaacatcttggcacagttcagtgtgcc 15674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 17042108 - 17042160
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttc 99  Q
    |||||||||||||||| ||| |||| ||||||| |||||||||||||| ||||    
T  17042108 gatgttggatacgatgttccgacatcctggcacggttcagtgtgcctgggttc 17042160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 6578894 - 6578940
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtg 90  Q
    ||||||||||||||||||| |||||||| ||| ||| ||||||||||    
T  6578894 taagatgttggatacgatgttccaacatcctgacacggttcagtgtg 6578940  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 3551824 - 3551873
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||||||| |||| ||||||||  |||||| |||||||||||||    
T  3551824 taagatgttggatatgatgttccaacatcgtggcacggttcagtgtgcct 3551873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 13914589 - 13914544
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||||| |||| ||| || |||||||||||||||||    
T  13914589 gatgttggatacgatgttccatcatcctagcacagttcagtgtgcc 13914544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 13920314 - 13920269
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||||| || ||||| || |||||||||||||||||    
T  13920314 gatgttggatacgatgttctaacatcctagcacagttcagtgtgcc 13920269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 18035154 - 18035207
Alignment:
Q  223 caaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||| ||||||| || | ||||| ||||||||||||||||||||||||||    
T  18035154 caaacgtttaaacatcgtacaaaacatattaaaacaagtgcgctagaatttcaa 18035207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 23954788 - 23954869
Alignment:
Q  195 tgatgttggaacattaatcgtaacattgcaaacgttaaaacatcat-atagaac-atttaaaacaagtgcgctagaatttca 274  Q
    |||||||| ||||||||||||||| ||||||| ||   |||||||| ||||| | | |||||||||||| ||||||||||||    
T  23954788 tgatgttgaaacattaatcgtaactttgcaaatgtcgtaacatcataatagagctaattaaaacaagtgtgctagaatttca 23954869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 8e-36; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 22485982 - 22485849
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| ||||||||||||||| |||| |  || | |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |    
T  22485982 gaaccaaagtttcaacatgtgtttaggtgtctctggaaaaagttggatacgatgctccaacatcctggcacagttcagtgtgcctgagttctcgtctgtt 22485883  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||||||  ||||||||||||||||||||    
T  22485882 tgtacgcgcgccctttattgtttaaggaaacaat 22485849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 23540725 - 23540850
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| | ||||||| ||||||||||| |||||||| ||||||||||| |||||||||| |||   |||||||||||||||    
T  23540725 gttccaacatgtgtttaggcatctctgtaagatgatggatacgatgttccaacatcctggcacagtttagtgtgcctgggtttatgcctacttgtacgcg 23540824  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  23540825 cgccctttattgtttaaggaaacaat 23540850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 33962574 - 33962449
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||| ||||||| ||| | ||||||||||||||  ||| |||||||| |||||||||||||||||||||||| ||  | ||  |||||||||    
T  33962574 gttccaacatgtatttaggcatctctgtaagatgttggatattatgttccaacatcctggcacagttcagtgtgcctgaggtcatgtctctttgtacgcg 33962475  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  33962474 cgccctttattgtttaaggaaacaat 33962449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 23541629 - 23541723
Alignment:
Q  183 ctgcttatcgcgtgatgttggaacattaatcgt-aacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| |||||| ||||||| |||||||||||    
T  23541629 ctgcttatcgcgtgatgttggaacattgatcgtaaacattgcaaacgttaaaacatcatacataacatattaaaataagtgcggtagaatttcaa 23541723  T

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Target: chr8; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 27924771 - 27924896
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| | | | |||||||||||||| |||| |||||||| ||| |||  ||||||||||||| ||||  ||||||||||||||     
T  27924771 gttccaacatgtgtttaggcatttctgtaagatgttggataagatgttccaacatcctgacacgattcagtgtgcctgggttcatgcctacttgtacgca 27924870  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    |||   ||||||||||||||||||||    
T  27924871 cgctctttattgtttaaggaaacaat 27924896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 33977900 - 33977775
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||| ||||||| ||| | ||||||||||||||  ||| |||||||| ||| |||||||||||||| ||| ||||  ||||| ||||||| |    
T  33977900 gttccaacatgtatttaggcatctctgtaagatgttggatattatgttccaacatcctgacacagttcagtgtgtctgggttcatgcctatttgtacgtg 33977801  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  33977800 cgccctttattgtttaaggaaacaat 33977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 45136951 - 45136827
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||  ||| | | |||||||||||| |||| |||||||| ||| ||| ||| ||||||| |||||||| ||||||||||| |||    
T  45136951 gttccaacatgtgtttaggtatctctgttagatgttggatatgatgttccaacatcctgacacggtttagtgtgcttgagttcttgcctacttgta-gcg 45136853  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  45136852 cgccctttattgtttaaggaaacaat 45136827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 22472719 - 22472629
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaa 276  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||  |||||||||||||    
T  22472719 ttatcgtgtgatgttgaaacattaatcgtaacatcgcaaacgttaaaacatcatacagaacgtattaaaacaagtgtcctagaatttcaaa 22472629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 22480935 - 22481024
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| | ||||| ||||||||||||  ||||||||||||    
T  22480935 ttatcgcgtgatgttgaaacattaatcgtaacatcgcaaacgttaaaatatcatacaaaacatattaaaacaagtgttctagaatttcaa 22481024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 26537123 - 26537003
Alignment:
Q  22 aacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcct 121  Q
    ||||||||||||||| | |   |||||||||||||| |||| ||||||||  |||||| |||||||||| ||  ||||  ||||| ||||||| |||||     
T  26537123 aacatgtgtttaggcatatccgtaagatgttggatatgatgttccaacatcatggcacggttcagtgtgtctaggttcatgcctatttgtacgtgcgcca 26537024  T
Q  122 gttattgtttaaggaaacaat 142  Q
     |||| |||||||||||||||    
T  26537023 cttatggtttaaggaaacaat 26537003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 45133601 - 45133513
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||| ||||||| ||||||| | |  ||||||||||| ||||||||||| || ||||||| ||||||||||||| |||||||||||    
T  45133601 ttatcgcatgatgttagaacattgaacagaacattgcaaatgttaaaacatcgtagagaacatattaaaacaagtgcactagaatttca 45133513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 24091903 - 24091821
Alignment:
Q  193 cgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||||||||||||| | |  ||||||  ||||||| ||||||| || ||||||| |||||||||||||||||||||||||    
T  24091903 cgtgatgttggaacattgaacagaacattataaacgttgaaacatcttacagaacatattaaaacaagtgcgctagaatttca 24091821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 11221497 - 11221577
Alignment:
Q  195 tgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||||||||||| | || ||||||| ||||||| ||||||| || | ||||  |||||||||||||||||||||||||    
T  11221497 tgatgttggaacattgaacggaacattgaaaacgtttaaacatcgtacaaaacaaattaaaacaagtgcgctagaatttca 11221577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 9997310 - 9997237
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcg 118  Q
    ||||||||||||||||||| || | |||| |||||| ||||||||||||||| |||  ||||| |||||||||||    
T  9997310 taagatgttggatacgatgttcta-cattttggcacggttcagtgtgcctgatttcatgcctatttgtacgcgcg 9997237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 27925651 - 27925733
Alignment:
Q  193 cgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||| |||||| | || ||||||||| |||||||||||||  | | ||||| ||||||||| |||||||||||||||    
T  27925651 cgtgatgttgaaacattgaacgaaacattgcatacgttaaaacatctgacataacatattaaaacaaatgcgctagaatttca 27925733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 18622475 - 18622426
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  18622475 taagatgttggatacgatgttccaacatcttggcacggttcagtgtgcct 18622426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 1684765 - 1684721
Alignment:
Q  48 atgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    ||||| |||||||||||||||||| || |||||||||||||||||    
T  1684765 atgtttgatacgatgctccaacatcctagcacagttcagtgtgcc 1684721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 25241152 - 25241095
Alignment:
Q  64 tccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcct 121  Q
    ||||||||||||| || ||||||||||||||| |||  ||||| || |||||||||||    
T  25241152 tccaacattctggtacggttcagtgtgcctgaattcatgcctatttatacgcgcgcct 25241095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 8e-36; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 24789481 - 24789598
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||| ||| |  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  |||||||||||||    
T  24789481 caacatgtgtttaggcatctctggaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgcc 24789580  T
Q  121 tgttattgtttaaggaaa 138  Q
      ||||||||||||||||    
T  24789581 ctttattgtttaaggaaa 24789598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 12911341 - 12911212
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||| |  |    
T  12911341 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgcttcaacattctgacacggttcagtgtgtctgagttctcgcttgtt 12911242  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaa 138  Q
    ||||||||||||  ||||||||||||||||    
T  12911241 tgtacgcgcgccctttattgtttaaggaaa 12911212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 23759474 - 23759340
Alignment:
Q  8 agaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctac 107  Q
    |||||| ||||| |||||||| |||||||||||||  ||||||||||||  |||||| |||||| ||| ||| ||||| |||||||||||||||  ||      
T  23759474 agaaccaaagtttcaacatgtatttaggcgtctttggaagatgttggatgtgatgcttcaacatcctgtcacggttcaatgtgcctgagttctcaactgt 23759375  T
Q  108 ttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||||||||||  ||||||||||||||||||||    
T  23759374 ttgtacgcgcgccctttattgtttaaggaaacaat 23759340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 12910426 - 12910338
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| ||||| | ||||||||||||||||| |||||||    
T  12910426 ttatcgcgtgatgttgaaactttaatcgtaacattgcaaacgctgaaacatcatacagaacgtattaaaacaagtgcgctaaaatttca 12910338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 23758562 - 23758474
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaac-atttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| ||||||||||||||||||||||||  | |||||||||| | ||| | |||||||||||| ||||||||||||    
T  23758562 ttatcgcgtgatgttgaaacattaatcgtaacattgcaaacactgaaacatcatacaaaactaattaaaacaagtgtgctagaatttca 23758474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 22611684 - 22611607
Alignment:
Q  65 ccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||| ||| ||| |||||||||| ||||||||||||||  |||||||||||||  ||||||||||||||||||||    
T  22611684 ccaacatcctgacacggttcagtgtgactgagttctcgcctgtttgtacgcgcgccctttattgtttaaggaaacaat 22611607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 22610829 - 22610741
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| |||||||||||||| |||||||||     ||||||||| ||||||| |||||| ||||||||||||||||||    
T  22610829 ttatcgcgtgatgttgaaacattaatcgtaatattgcaaactccgtaacatcatacagaacatattaaaataagtgcgctagaatttca 22610741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 36399025 - 36399110
Alignment:
Q  195 tgatgttggaacattaatcgtaacattgcaaacgttaaaa-catcata--tagaacatttaaaacaagtgcgctagaatttcaaaa 277  Q
    |||||||| ||||||||||| ||||| ||||| ||||||| |||||||  || |||||||||||||||| ||| ||||||||||||    
T  36399025 tgatgttgaaacattaatcgaaacatcgcaaatgttaaaaacatcatacatataacatttaaaacaagtacgccagaatttcaaaa 36399110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 21531218 - 21531097
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||| || |||| ||| | ||||||||||||||| ||| |||||||| |||| |  |||| ||||||||   |||  ||||  |||||||||    
T  21531218 gttccaacatgt-ttcaggcatctctgtaagatgttggatacaatgttccaacatcctggtatggttcggtgtgccttgtttcatgcctgtttgtacgcg 21531120  T
Q  117 cgcctgttattgtttaaggaaac 139  Q
    ||||| ||||| |||||||||||    
T  21531119 cgccttttattatttaaggaaac 21531097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 24790382 - 24790472
Alignment:
Q  188 tatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaaa 277  Q
    ||||||||||||||| |||||||||||||||||| |||||     |||||| || | ||||| |||||| ||||| |||||||||||||||    
T  24790382 tatcgcgtgatgttgaaacattaatcgtaacattacaaactccgtaacatcgtacaaaacatattaaaataagtgggctagaatttcaaaa 24790472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 21249543 - 21249592
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||||||| |||||||| ||||||| ||| |||||||||    
T  21249543 taagatgttggatacgatgttccaacatcctggcacggtttagtgtgcct 21249592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 27108254 - 27108209
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||    
T  27108254 gatgttggatacgatgttccaacatcctggcacggttcagtgtgcc 27108209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 15329134 - 15329086
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    ||||||||||||||||||| |||||||| ||||||| |||| |||||||    
T  15329134 taagatgttggatacgatgttccaacatcctggcacggttctgtgtgcc 15329086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 24311201 - 24311246
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||| ||| |||||||| ||||||| ||||||||||||    
T  24311201 gatgttggatacaatgttccaacatcctggcacggttcagtgtgcc 24311246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 27111843 - 27111798
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  27111843 gatgttggatacgatgttccaacatcctggcacggttcaatgtgcc 27111798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 5e-34; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 645982 - 645849
Alignment:
Q  8 agaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctac 107  Q
    |||||| ||||| ||||||||||||| |||||| || || ||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||      
T  645982 agaaccaaagtttcaacatgtgtttaagcgtctctagaaaatgttggatgcgatgcttcaacatcctggcacggttcagtgtgcctgagttctcgcctgt 645883  T
Q  108 ttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||||| || ||||||||||||||||||||    
T  645882 ttgtacgcgcgtct-ttattgtttaaggaaacaat 645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 12326653 - 12326528
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| || ||||  |||||||||||||||    
T  12326653 gttccaacatgtgtttaggcatctctataagatgttggatacgatgttccaacatcctggcacggttcagtgtgcatgggttcatgcctacttgtacgcg 12326554  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    | |   ||||||||||||||||||||    
T  12326553 cactctttattgtttaaggaaacaat 12326528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 16207200 - 16207324
Alignment:
Q  18 ttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgc 117  Q
    ||||||||||||||||||| ||| | |||||||||||||| |||| |||||||| ||||||  |||||||||||||| ||||  ||||||||||||||||    
T  16207200 ttccaacatgtgtttaggcatctctgtaagatgttggatatgatgttccaacatcctggcatggttcagtgtgcctgggttcatgcctacttgtacgcgc 16207299  T
Q  118 gcctgttattgtttaaggaaacaat 142  Q
     ||  ||||||||||||||||||||    
T  16207300 accctttattgtttaaggaaacaat 16207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 15507071 - 15506946
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| || ||||| ||| ||| ||| ||| |||||| ||||| |||||| ||||||||    
T  15507071 gttccaacatgtgtttaggcatctctataagatgttggatacgatgttcaaacatcctgacacggttaagtatgcctgggttcttgcctacctgtacgcg 15506972  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    |||   ||||||||||||||||||||    
T  15506971 cgctctttattgtttaaggaaacaat 15506946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 11520721 - 11520855
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcct-ac 107  Q
    ||||| ||||| |||||||||||||||||||| |  |||||||||||||| ||||| |||||| ||||||| ||||||||||   ||||||||||||       
T  11520721 gaaccaaagtttcaacatgtgtttaggcgtctatggaagatgttggatacaatgcttcaacatcctggcacggttcagtgtgttcgagttctcgcctgtt 11520820  T
Q  108 ttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||||||||||  ||||||||||||||||||||    
T  11520821 ttgtacgcgcgccctttattgtttaaggaaacaat 11520855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 29545459 - 29545584
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||| ||| | ||||||||||||||| ||| |||||||| || |||  |||||||||| ||| ||||  ||||| |||||||||    
T  29545459 gttccaacatgtgtttaggcatctctgtaagatgttggatacaatgttccaacatcctagcatggttcagtgtgtctgggttcatgcctatttgtacgcg 29545558  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  29545559 cgccctttattgtttaaggaaacaat 29545584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 4459580 - 4459455
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||| ||||||||| ||| | ||||||||||||||| ||| |||||||| || ||||  ||||||||||||  ||||  ||||| |||||||||    
T  4459580 gttccaacatctgtttaggcatctctgtaagatgttggatacaatgttccaacatcctagcacgattcagtgtgcctaggttcatgcctatttgtacgcg 4459481  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  |||||||||| |||||||||    
T  4459480 cgccctttattgtttatggaaacaat 4459455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 11521631 - 11521720
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |  ||||||||||| ||| | ||||||||||||||||||||||||||    
T  11521631 ttatcacgtgatgttgaaacattaatcgtaacattgcaaacgctgtaacatcatatataacttattaaaacaagtgcgctagaatttcaa 11521720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 11998816 - 11998728
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||  | | ||||| |||||||||||||||||||||||||    
T  11998816 ttatcacgtgatgttggaacattaaacggaacattgcaaacgttaaaacatctgacataacatattaaaacaagtgcgctagaatttca 11998728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 20992379 - 20992259
Alignment:
Q  22 aacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcct 121  Q
    ||||| ||||||||| ||| | |||||||||||||| |||| |||||||| ||||||| |||||||||||||  ||||  ||||| |||||||||| |      
T  20992379 aacatttgtttaggcatctctgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtgcctaggttcatgcctatttgtacgcgcactc 20992280  T
Q  122 gttattgtttaaggaaacaat 142  Q
     ||||||||||||||||||||    
T  20992279 tttattgtttaaggaaacaat 20992259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 645070 - 644980
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaa 276  Q
    |||||||||||||||| ||||||| | ||||||||||||||| | |||||||||| ||||| | |||||||||||||||||||||| ||||    
T  645070 ttatcgcgtgatgttgaaacattagttgtaacattgcaaacgattaaacatcatacagaacgtattaaaacaagtgcgctagaattccaaa 644980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 15438917 - 15438792
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||| ||||||||||||||| ||| | ||||||||||||||||||| |  ||||| ||| ||| ||| |||||||||| ||||| |||||| |||||||     
T  15438917 gttcaaacatgtgtttaggcatctctgtaagatgttggatacgatgtttaaacatcctgacacggttaagtgtgcctgggttcttgcctacctgtacgca 15438818  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    | |   ||||||||||||||||||||    
T  15438817 cactctttattgtttaaggaaacaat 15438792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 4458667 - 4458588
Alignment:
Q  196 gatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| || |||||||||||||||||||||||  | ||||||| |||||||||||||||| ||||||||    
T  4458667 gatgttggaacattaaacggaacattgcaaacgttaaaacatctgacagaacatattaaaacaagtgcgctcgaatttca 4458588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 11588393 - 11588315
Alignment:
Q  195 tgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaattt 272  Q
    |||||||| ||||||||||||||||||||||||||   ||||||||| | ||||| |||||||||||||||||||||||    
T  11588393 tgatgttgaaacattaatcgtaacattgcaaacgtcgtaacatcatacataacatattaaaacaagtgcgctagaattt 11588315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 12325754 - 12325673
Alignment:
Q  195 tgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||||||||||||| | || ||||||||||| |||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  12325754 tgatgttggaacattgaacggaacattgcaaatgttaaaacatcatacagaacatcttaaaacaagtgcattagaatttcaa 12325673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 10661701 - 10661602
Alignment:
Q  18 ttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgc 117  Q
    ||||||||||| ||||||| | | | ||||||||||||||||||| |||||||| || |||| ||||||||||||||| |||  ||||| ||||||||||    
T  10661701 ttccaacatgt-tttaggcatttatgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtgcctgatttcatgcctatttgtacgcgc 10661603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 13455339 - 13455421
Alignment:
Q  193 cgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||||||||||||| | |||||||| | |||||||||||||||||| ||||||| ||||||||| |  ||||||||||||    
T  13455339 cgtgatgttggaacatttaacgtaacatcgaaaacgttaaaacatcatacagaacatattaaaacaaatttgctagaatttca 13455421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 16208103 - 16208189
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaattt 272  Q
    |||| |||||||||||||||||| | || |||||| |||| |||||||||||||| | ||||| |||||||||||| ||||||||||    
T  16208103 ttattgcgtgatgttggaacattgaacgaaacattacaaatgttaaaacatcatacataacatattaaaacaagtgtgctagaattt 16208189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 14166003 - 14165892
Alignment:
Q  15 aagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacg 114  Q
    ||||||||||||||| ||||||  || ||||||||||||||||| |||  ||||||| || ||| || | |||||||||| ||||  |||||  ||||||    
T  14166003 aagttccaacatgtggttaggcaactctataagatgttggatacaatgtcccaacatcctagcatagctaagtgtgcctgggttcatgcctatatgtacg 14165904  T
Q  115 cgcgcctgttat 126  Q
    |||||| |||||    
T  14165903 cgcgcccgttat 14165892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 26132274 - 26132350
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctg 94  Q
    |||||||||||| || |||| ||| | |||||||||||||| |||| |||||||| ||||||| ||||||||||||||    
T  26132274 gttccaacatgt-ttcaggcatctctgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtgcctg 26132350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 21261270 - 21261195
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||||| ||||||| | | | |||||||||||||| |||| |||||||| ||||||| |||||||||||||    
T  21261270 gttccaacatgt-tttaggcatttctgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtgcct 21261195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 23082095 - 23082170
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    |||||||||||| ||||||| | | | |||||||||||||| |||| |||||||| ||||||| |||||||||||||    
T  23082095 gttccaacatgt-tttaggcatttctgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtgcct 23082170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 9567701 - 9567656
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||||| |||||||| || |||||||||||||||||    
T  9567701 gatgttggatacgatgttccaacatcctagcacagttcagtgtgcc 9567656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 14927459 - 14927410
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||||||| |||||||| ||||||| ||| |||||||||    
T  14927459 taagatgttggatacgatgttccaacatcctggcacggtttagtgtgcct 14927410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 15350925 - 15350876
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||||||| |||||||| ||||||| ||| |||||||||    
T  15350925 taagatgttggatacgatgttccaacatcctggcacggtttagtgtgcct 15350876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 23960839 - 23960790
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||||||| |||||||| |||||||  ||||||||||||    
T  23960839 taagatgttggatacgatgttccaacatcctggcacgattcagtgtgcct 23960790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 14165103 - 14165015
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaac-atttaaaacaagtgcgctagaatttca 274  Q
    ||||||| |||||||| ||||||||||  |||||| |||||||   |||||||||  |||| | |||||||||||| ||||||||||||    
T  14165103 ttatcgcatgatgttgaaacattaatcacaacattacaaacgtcgtaacatcatacggaactaattaaaacaagtgtgctagaatttca 14165015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 16221892 - 16221952
Alignment:
Q  18 ttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggca 78  Q
    ||||||||||||||  ||| ||| | ||||||||||||||||||| |||||||| ||||||    
T  16221892 ttccaacatgtgttctggcatctctgtaagatgttggatacgatgttccaacatcctggca 16221952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 42637020 - 42636946
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcg 118  Q
    |||||||||| |||||||| |||||| | ||||||| |||||||||| |||  |||  ||||| |||||||||||    
T  42637020 taagatgttgaatacgatgttccaacgtcctggcacggttcagtgtgtctgctttcatgcctatttgtacgcgcg 42636946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 20924452 - 20924501
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcct 93  Q
    ||||||||||||||||||| |||||||| ||||||   ||||||||||||    
T  20924452 taagatgttggatacgatgttccaacatcctggcaagattcagtgtgcct 20924501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 1311 - 1444
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  ||||||||||||| ||||||||||||| || |||  |||||||||||||||||||||||||  |    
T  1311 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatatgatgctccaacatcctagcatggttcagtgtgcctgagttctcgcctgtt 1410  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||| ||  ||||||||||||||||||||    
T  1411 tgtacgcgcaccctttattgtttaaggaaacaat 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 24988 - 25121
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||  |    
T  24988 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcctaagttctcgcctgtt 25087  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||  |||||  ||||| ||||||||||||||    
T  25088 tgtacatgcgccctttattatttaaggaaacaat 25121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 25896 - 25984
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||||| ||||||||||||| ||||||||||| | |||||||||| ||||| | ||||||||||| |||||||||||||    
T  25896 ttatcgcgtgatgttgaaacattaatcgtagcattgcaaacgctgaaacatcatacagaacgtattaaaacaagtacgctagaatttca 25984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 16354 - 16221
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| |||||  ||||||||||||||||||| |  |||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||  ||  |    
T  16354 gaaccaaagtttgaacatgtgtttaggcgtctctggaagatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgagttctcttctgtt 16255  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    ||||||||| ||  ||||||||||||||||||||    
T  16254 tgtacgcgcaccctttattgtttaaggaaacaat 16221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 37427 - 37306
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||||||| | ||| ||||||||||| ||| |||||||| ||| ||| ||||||||||||| |||||||||||| ||||| ||||| |    
T  37427 caacatgtgtttaggcgtctctgtaaaatgttggatacaatgttccaacatcctgacacggttcagtgtgcctaagttctcgcctatttgtaggcgcgtc 37328  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  37327 ctttattgtttaaggaaacaat 37306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 109569 - 109701
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||| |||||||||||||||||||| |  |||||||| ||| ||||||| |||||| |||| || ||| |||||| ||||||||||||||  |    
T  109569 gaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttagatgcgatgcttcaacatcctggaacggtttagtgtgtctgagttctcgcctgtt 109668  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaa 141  Q
    ||||||||||||  |||||||||||||||||||    
T  109669 tgtacgcgcgccctttattgtttaaggaaacaa 109701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 110480 - 110569
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    |||||| ||||||||| |||||||||||||||||||||| || | |||||||||| | ||| | |||||||||||||| || ||||||||    
T  110480 ttatcgagtgatgttgaaacattaatcgtaacattgcaatcgctgaaacatcatacataacgtattaaaacaagtgcggtaaaatttcaa 110569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 64; Significance: 2e-27; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 47700 - 47835
Alignment:
Q  8 agaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgc-cta 106  Q
    |||||| || || |||||||||||||||||||| |  ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||  |     
T  47700 agaaccaaaatttcaacatgtgtttaggcgtctctggaagatgttggatacgatactccaacatcctggcacggttcagtgtgcctgagttctcgcggtg 47799  T
Q  107 cttgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
     |||||||||||||  || ||||||||| |||||||    
T  47800 tttgtacgcgcgccctttgttgtttaagaaaacaat 47835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 50315 - 50401
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaattt 272  Q
    |||||||||||||||| |||||||||||||||||||||||||    ||||||||| ||||| | |||||||||||| ||||||||||    
T  50315 ttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgccttaacatcatacagaacgtattaaaacaagtgtgctagaattt 50401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 61696 - 61786
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaa 276  Q
    |||||||||||||||| || ||||||||||||||||||||||    ||||||||| | ||||| ||||||||| || ||||||||||||||    
T  61696 ttatcgcgtgatgttgaaatattaatcgtaacattgcaaacgccgtaacatcatacaaaacatattaaaacaaatgtgctagaatttcaaa 61786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 159919 - 159787
Alignment:
Q  10 aaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctactt 109  Q
    |||| ||||| |||||||||||||||||||| |  ||||||||||||| ||||| ||||||| ||||||| || ||||||  ||||||||||||||  ||    
T  159919 aaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatatgatgccccaacatcctggcacggtccagtgtctctgagttctcgcctgttt 159820  T
Q  110 gtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||| ||| ||  ||||||||||||||||||||    
T  159819 gtacacgcaccctttattgtttaaggaaacaat 159787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 58; Significance: 6e-24; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 16648 - 16769
Alignment:
Q  21 caacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcc 120  Q
    |||||||||||||||| ||||| ||||||||||||||||||| || ||||| ||| ||  ||||||||||||||| |||  || |||||||| ||| |||    
T  16648 caacatgtgtttaggcatctttgtaagatgttggatacgatgatctaacatcctgacatggttcagtgtgcctgatttcatgcatacttgtaagcgtgcc 16747  T
Q  121 tgttattgtttaaggaaacaat 142  Q
      ||||||||||||||||||||    
T  16748 ctttattgtttaaggaaacaat 16769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 17500 - 17586
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaattt 272  Q
    |||||||||||| ||| |||||| | |  ||||||||||||||||||||||| || |||||||  ||||||||||||||||||||||    
T  17500 ttatcgcgtgattttgaaacattgaactgaacattgcaaacgttaaaacatcgtacagaacatactaaaacaagtgcgctagaattt 17586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 7897 - 8022
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    ||||||||||||||||| || ||| |||||||||||| |||||||| || ||||| | ||||| |||||||||||||| ||||  ||||| ||||||||     
T  7897 gttccaacatgtgtttaagcatctctataagatgttgcatacgatgttcgaacatcccggcactgttcagtgtgcctgggttcatgcctatttgtacgcc 7996  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    |||   ||||||||||||||||||||    
T  7997 cgctctttattgtttaaggaaacaat 8022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 15941 - 16064
Alignment:
Q  18 ttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgc 117  Q
    |||||||| |||||||| | ||| | ||||||||||||||||||| |||||||| ||||||| |||| ||||||||| ||||   |||||||||||| ||    
T  15941 ttccaacacgtgtttag-catctctgtaagatgttggatacgatgttccaacatcctggcacggttcggtgtgcctgggttcattcctacttgtacgtgc 16039  T
Q  118 gcctgttattgtttaaggaaacaat 142  Q
    ||   ||||||||||||||||||||    
T  16040 gctctttattgtttaaggaaacaat 16064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 50; Significance: 4e-19; HSPs: 6)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 17443 - 17568
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||  ||| | ||||||||| |||| |||| |||||||| ||  ||| |||||||||||||||||||  || || ||||| | |    
T  17443 gttccaacatgtgtttaggtatctctgtaagatgttagatatgatgttccaacatcctaccacggttcagtgtgcctgagttcatgcatatttgtatgtg 17542  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  17543 cgccctttattgtttaaggaaacaat 17568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 26837 - 26962
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcg 116  Q
    |||||||||||||||||||  ||| | ||||||||| |||| |||| |||||||| ||  ||| |||||||||||||||||||  || || ||||| | |    
T  26837 gttccaacatgtgtttaggtatctctgtaagatgttagatatgatgttccaacatcctaccacggttcagtgtgcctgagttcatgcatatttgtatgtg 26936  T
Q  117 cgcctgttattgtttaaggaaacaat 142  Q
    ||||  ||||||||||||||||||||    
T  26937 cgccctttattgtttaaggaaacaat 26962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 6857 - 6977
Alignment:
Q  17 gttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattc-tggcacagttcagtgtgcctgagttctcgcctacttgtacgc 115  Q
    |||||||||||||||||| | ||||| |||||| ||||||| |||| |||||||| | |||||| |||||||||| ||| ||||  ||||| ||||||||    
T  6857 gttccaacatgtgtttagccatctttgtaagattttggatatgatgttccaacatccttggcacggttcagtgtgtctgggttcatgcctatttgtacgc 6956  T
Q  116 gcgcctgttattgtttaaggaaa 138  Q
    || ||| ||||||||||||||||    
T  6957 gc-cct-ttattgtttaaggaaa 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 18353 - 18435
Alignment:
Q  193 cgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||| || | ||  |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  18353 cgtgatgttggaacgttgaacgggacattgcaaacgttaaaacatcttacagaacatattaaaacaagtgcgctagaatttca 18435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 27747 - 27829
Alignment:
Q  193 cgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    |||||||||||||| || | ||  |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  27747 cgtgatgttggaacgttgaacgggacattgcaaacgttaaaacatcttacagaacatattaaaacaagtgcgctagaatttca 27829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 273
Target Start/End: Original strand, 7762 - 7849
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttc 273  Q
    ||||| |||||| |||||||||| | | | ||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  7762 ttatctcgtgatattggaacattgaacatgacattgcaaacgttaaatcatcttacagaacatattaaaacaagtgcgctagaatttc 7849  T

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Target: scaffold0359 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 2737 - 2606
Alignment:
Q  10 aaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctactt 109  Q
    |||| ||||| |||||||| || |||||| | |  ||||||||| || ||||||| ||||||  |||||| |||||||||||||||||||||| ||  ||    
T  2737 aaccaaagtttcaacatgtattcaggcgtatcttgaagatgttgtat-cgatgctacaacatcttggcacggttcagtgtgcctgagttctcgactgttt 2639  T
Q  110 gtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||| ||||  ||||||||||||||||||||    
T  2638 gtacgcacgccctttattgtttaaggaaacaat 2606  T

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Target: scaffold0102 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 36942 - 36854
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttca 274  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||  |||||||||||    
T  36942 ttatcgcatgattttgaaacattaatcgtaacattgcaaacgtcgtaacatcatatagaacatattaaaacaagtgtcctagaatttca 36854  T

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Target: scaffold0333 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 5581 - 5491
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaaa 276  Q
    |||||||||||||||| ||||||||| |||||||||||||||    || |||||| ||||||| ||||||||||||||||| |||||||||    
T  5581 ttatcgcgtgatgttgaaacattaattgtaacattgcaaacgccgtaatatcatacagaacatattaaaacaagtgcgctaaaatttcaaa 5491  T

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Target: scaffold0006 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 88593 - 88462
Alignment:
Q  9 gaaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctact 108  Q
    ||||| ||||||||||||||| |||||| ||| ||  ||||||||||||| ||| |||||||| ||| ||  |||||||||||||||||||  || ||      
T  88593 gaaccaaagttccaacatgtggttaggcatctgta--agatgttggatacaatgttccaacatcctgacatggttcagtgtgcctgagttcatgcatata 88496  T
Q  109 tgtacgcgcgcctgttattgtttaaggaaacaat 142  Q
    |||||||||||   ||||||||||||| ||||||    
T  88495 tgtacgcgcgctctttattgtttaagggaacaat 88462  T

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Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 87672 - 87588
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacatttaaaacaagtgcgctagaatt 271  Q
    ||||| |||||||||||||||||||  | ||||||| | || |||| |||||  | |||||||||||||||||||| ||||||||    
T  87672 ttatcacgtgatgttggaacattaaatggaacattgtagacattaatacatctgacagaacatttaaaacaagtgcactagaatt 87588  T

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Target: scaffold0338 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 16437 - 16525
Alignment:
Q  187 ttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat-ttaaaacaagtgcgctagaatttcaa 275  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| | ||| | ||||||||||||| || |||||||||    
T  16437 ttatcgcgtgatgttggaa-attaaacgtaacatcgcaaacgttaaaacatcatacataacgtattaaaacaagtgcccttgaatttcaa 16525  T

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Target: scaffold0069 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 9522 - 9433
Alignment:
Q  10 aaccgaagttccaacatgtgtttaggcgtctttataagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttc 99  Q
    |||| |||||||||||| ||||||||| ||| | |||| |||||||||| ||| |||||| |  |||||| |||||||||||||||||||    
T  9522 aaccaaagttccaacatatgtttaggcatctctgtaaggtgttggatacaatgttccaacttcttggcacggttcagtgtgcctgagttc 9433  T

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Target: scaffold1001 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 776 - 682
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgtgcctgagttctcgcctacttgtacgcgcgcctgttattgtttaaggaaac 139  Q
    ||||||||||||||||||| ||||||||  |||||| |||||||||||||| ||||  ||||||   |||||||||||  |||| |||||||||||    
T  776 taagatgttggatacgatgttccaacatcttggcacggttcagtgtgcctg-gttcatgcctacacttacgcgcgccttgtattatttaaggaaac 682  T

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Target: scaffold0035 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 38119 - 38074
Alignment:
Q  44 taagatgttggatacgatgctccaacattctggcacagttcagtgt 89  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||    
T  38119 taagatgttggatacgatgttccaacatcctggcacagttaagtgt 38074  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 50258 - 50303
Alignment:
Q  47 gatgttggatacgatgctccaacattctggcacagttcagtgtgcc 92  Q
    |||||||||||||||| |||||||| || |||||||||||||||||    
T  50258 gatgttggatacgatgttccaacatcctagcacagttcagtgtgcc 50303  T

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