View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1484_low_26 (Length: 383)
Name: NF1484_low_26
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1484_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 7 - 374
Target Start/End: Complemental strand, 21239286 - 21238918
Alignment:
| Q |
7 |
attttaaacctcaacagaaaaaggaaaaccaaacttcaccaagagaaa-ccaaatattctaaaaacaatcacgttattaacaataaaaccagatttaatt |
105 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
21239286 |
attttaaacctcaacagaaaaaggaaaaccaaacttcaccaagagaaaaccaaatattctaaaaacaatcaagttattaacaataaaaccagatttaatt |
21239187 |
T |
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| Q |
106 |
caccatttacatttgggatagtaaattttctgaaacaaccaaatgttttctttcttcctcggatttcattctatatagctataaaaagaaacttcccctc |
205 |
Q |
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| T |
21239186 |
cacaatttacatttgggatagtaaattttctgaaacaaccaaatgttttctttcttcctcggatttcattctatatagctataaaaagaaacttcccctc |
21239087 |
T |
|
| Q |
206 |
aattttccattttatcaacaaataatttttactaccagaattttaaatgttgctcttgaagttaataagtatcagagcagctacatcgaatacaacttat |
305 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |
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| T |
21239086 |
aattttctattttatcaacaaataatttttactaccagaattttaaatgttgctcttaaagttaataagtatcagagcacctacatcgaatacaacttat |
21238987 |
T |
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| Q |
306 |
ttagccaccgacgctttagattgaaggcgtgcctcatgttcaactgacacgacacatgtagtattcata |
374 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21238986 |
ttagccaccgacgcttcagattgaaggcgtgcctcatgttcaactgacacgacacatgtagtattcata |
21238918 |
T |
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