View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1484_low_80 (Length: 227)

Name: NF1484_low_80
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1484_low_80
NF1484_low_80
[»] chr6 (26 HSPs)
chr6 (97-219)||(4987972-4988095)
chr6 (97-208)||(4032016-4032128)
chr6 (97-204)||(16013454-16013562)
chr6 (107-206)||(16524418-16524518)
chr6 (97-205)||(3888456-3888565)
chr6 (97-189)||(15830724-15830816)
chr6 (111-189)||(14573165-14573243)
chr6 (108-189)||(3095758-3095838)
chr6 (97-189)||(21963984-21964076)
chr6 (108-183)||(5881796-5881871)
chr6 (108-189)||(35129092-35129174)
chr6 (132-189)||(11082283-11082340)
chr6 (132-189)||(21542484-21542541)
chr6 (97-189)||(30949162-30949254)
chr6 (131-169)||(5300658-5300696)
chr6 (132-201)||(7274900-7274970)
chr6 (132-193)||(12461462-12461524)
chr6 (131-189)||(17598354-17598412)
chr6 (132-189)||(30794230-30794287)
chr6 (138-186)||(5822075-5822123)
chr6 (112-175)||(14709836-14709899)
chr6 (131-189)||(10227973-10228031)
chr6 (97-189)||(16870830-16870923)
chr6 (108-189)||(31107232-31107313)
chr6 (132-189)||(34177679-34177736)
chr6 (97-189)||(374126-374218)
[»] chr2 (50 HSPs)
chr2 (97-207)||(32010133-32010244)
chr2 (97-205)||(26998348-26998457)
chr2 (97-201)||(32273702-32273807)
chr2 (97-205)||(38071027-38071135)
chr2 (99-207)||(4891656-4891766)
chr2 (97-198)||(20380154-20380256)
chr2 (97-204)||(44442162-44442271)
chr2 (108-204)||(9709555-9709652)
chr2 (108-189)||(14874005-14874086)
chr2 (114-180)||(16494972-16495037)
chr2 (108-189)||(45660407-45660488)
chr2 (132-189)||(28858375-28858432)
chr2 (108-189)||(33198668-33198749)
chr2 (111-189)||(9864756-9864834)
chr2 (131-204)||(11030951-11031025)
chr2 (112-189)||(12938288-12938365)
chr2 (132-189)||(19264166-19264223)
chr2 (132-189)||(28599185-28599242)
chr2 (101-189)||(30830633-30830721)
chr2 (108-188)||(40584436-40584516)
chr2 (133-189)||(43415468-43415524)
chr2 (134-189)||(45085325-45085380)
chr2 (132-178)||(11617090-11617136)
chr2 (132-201)||(25572111-25572181)
chr2 (132-189)||(3201392-3201449)
chr2 (132-189)||(6110236-6110293)
chr2 (108-189)||(8032705-8032786)
chr2 (132-189)||(29524078-29524135)
chr2 (132-189)||(35517189-35517246)
chr2 (132-189)||(41528322-41528379)
chr2 (132-201)||(8701668-8701738)
chr2 (131-189)||(10478239-10478297)
chr2 (132-186)||(24204569-24204623)
chr2 (131-189)||(43075811-43075869)
chr2 (133-169)||(33677550-33677586)
chr2 (111-171)||(35115859-35115919)
chr2 (134-201)||(40808744-40808811)
chr2 (108-205)||(921566-921664)
chr2 (97-156)||(29514089-29514148)
chr2 (131-189)||(792393-792451)
chr2 (131-189)||(14565410-14565468)
chr2 (108-186)||(28678688-28678765)
chr2 (131-189)||(29514512-29514570)
chr2 (131-189)||(43451566-43451624)
chr2 (131-189)||(44803959-44804017)
chr2 (132-189)||(5963267-5963323)
chr2 (131-180)||(16179633-16179682)
chr2 (132-189)||(21539819-21539876)
chr2 (133-189)||(6765970-6766026)
chr2 (97-189)||(18833947-18834039)
[»] chr8 (57 HSPs)
chr8 (97-207)||(41362327-41362438)
chr8 (97-207)||(4038902-4039012)
chr8 (97-204)||(8673410-8673518)
chr8 (97-207)||(17336771-17336882)
chr8 (97-207)||(38072192-38072303)
chr8 (97-189)||(25195086-25195177)
chr8 (97-207)||(17314859-17314970)
chr8 (97-207)||(2628184-2628295)
chr8 (97-207)||(8745612-8745723)
chr8 (108-178)||(26954442-26954512)
chr8 (108-207)||(29147257-29147357)
chr8 (134-207)||(28497158-28497232)
chr8 (131-207)||(17713286-17713363)
chr8 (134-190)||(4480841-4480897)
chr8 (132-189)||(7022442-7022499)
chr8 (108-189)||(26483572-26483653)
chr8 (132-189)||(36190836-36190893)
chr8 (134-189)||(43216386-43216441)
chr8 (108-186)||(5217432-5217510)
chr8 (108-189)||(7858568-7858649)
chr8 (132-189)||(29920307-29920364)
chr8 (132-189)||(31734179-31734236)
chr8 (132-189)||(34890213-34890270)
chr8 (97-145)||(41791543-41791591)
chr8 (133-188)||(35525652-35525707)
chr8 (133-183)||(14693434-14693484)
chr8 (132-189)||(8711941-8711997)
chr8 (132-189)||(13143828-13143885)
chr8 (132-189)||(41086425-41086482)
chr8 (105-189)||(6401657-6401741)
chr8 (134-189)||(13143984-13144040)
chr8 (97-204)||(27819688-27819796)
chr8 (131-187)||(39187297-39187353)
chr8 (131-189)||(34713592-34713650)
chr8 (131-189)||(35344431-35344489)
chr8 (131-167)||(14576213-14576249)
chr8 (134-186)||(15957953-15958005)
chr8 (97-185)||(25321629-25321717)
chr8 (107-187)||(44663830-44663910)
chr8 (131-186)||(8712587-8712642)
chr8 (133-172)||(33563567-33563606)
chr8 (134-189)||(33851062-33851117)
chr8 (133-168)||(34158351-34158386)
chr8 (131-189)||(3100017-3100075)
chr8 (131-189)||(27752650-27752708)
chr8 (131-189)||(35260121-35260179)
chr8 (131-189)||(35346343-35346401)
chr8 (131-189)||(44052685-44052743)
chr8 (131-189)||(44411248-44411306)
chr8 (108-189)||(16879431-16879512)
chr8 (114-171)||(34899971-34900028)
chr8 (132-189)||(35456064-35456120)
chr8 (132-168)||(2052898-2052934)
chr8 (132-201)||(4046919-4046990)
chr8 (133-189)||(8709825-8709881)
chr8 (133-189)||(16358151-16358206)
chr8 (132-188)||(28348674-28348730)
[»] chr3 (69 HSPs)
chr3 (97-207)||(22479032-22479143)
chr3 (97-207)||(10114940-10115051)
chr3 (97-207)||(10252040-10252151)
chr3 (97-207)||(22455986-22456097)
chr3 (97-208)||(21214270-21214382)
chr3 (75-208)||(6784330-6784465)
chr3 (107-207)||(10014308-10014409)
chr3 (101-189)||(38401413-38401501)
chr3 (97-204)||(47443955-47444062)
chr3 (97-207)||(8096996-8097107)
chr3 (97-207)||(2994393-2994507)
chr3 (97-207)||(25242156-25242267)
chr3 (97-177)||(48291851-48291931)
chr3 (95-207)||(34194915-34195028)
chr3 (97-207)||(30454703-30454813)
chr3 (108-207)||(46918191-46918291)
chr3 (97-207)||(7886595-7886706)
chr3 (108-189)||(20847265-20847346)
chr3 (131-186)||(16032987-16033042)
chr3 (108-189)||(6438129-6438210)
chr3 (132-189)||(23910510-23910567)
chr3 (132-189)||(30189641-30189698)
chr3 (132-189)||(41476333-41476390)
chr3 (132-193)||(23311585-23311647)
chr3 (131-189)||(31126274-31126332)
chr3 (107-189)||(37075005-37075087)
chr3 (97-204)||(49583994-49584093)
chr3 (132-189)||(579135-579192)
chr3 (132-189)||(2927359-2927416)
chr3 (132-189)||(9264621-9264678)
chr3 (112-189)||(26724988-26725065)
chr3 (108-189)||(37042414-37042495)
chr3 (132-189)||(46711655-46711712)
chr3 (132-188)||(32619828-32619884)
chr3 (97-189)||(34022627-34022719)
chr3 (133-189)||(50651034-50651090)
chr3 (108-187)||(28875452-28875531)
chr3 (131-189)||(37324083-37324142)
chr3 (108-205)||(23209260-23209358)
chr3 (108-189)||(35963198-35963279)
chr3 (133-178)||(47864262-47864307)
chr3 (132-188)||(23513630-23513686)
chr3 (133-189)||(53270306-53270362)
chr3 (134-189)||(3972347-3972401)
chr3 (134-189)||(3997477-3997531)
chr3 (134-189)||(19464147-19464202)
chr3 (134-189)||(21654310-21654365)
chr3 (101-171)||(36150957-36151028)
chr3 (132-189)||(11054308-11054366)
chr3 (131-169)||(54725627-54725665)
chr3 (131-189)||(55400800-55400858)
chr3 (133-178)||(7866491-7866536)
chr3 (108-189)||(36546588-36546669)
chr3 (108-189)||(36561646-36561727)
chr3 (133-189)||(14752205-14752261)
chr3 (137-189)||(46557167-46557219)
chr3 (145-207)||(17587782-17587845)
chr3 (131-189)||(1335172-1335230)
chr3 (131-189)||(28793224-28793282)
chr3 (132-166)||(29235257-29235291)
chr3 (131-189)||(45347713-45347771)
chr3 (131-189)||(45781459-45781517)
chr3 (131-189)||(46296077-46296135)
chr3 (132-189)||(6075151-6075208)
chr3 (136-189)||(33973564-33973617)
chr3 (132-169)||(34722622-34722659)
chr3 (133-189)||(31836990-31837046)
chr3 (145-189)||(50730191-50730235)
chr3 (145-189)||(50782619-50782663)
[»] chr1 (82 HSPs)
chr1 (97-207)||(30701404-30701515)
chr1 (97-207)||(7397737-7397848)
chr1 (97-207)||(25185322-25185434)
chr1 (107-207)||(50176563-50176664)
chr1 (97-204)||(45840088-45840195)
chr1 (97-207)||(15912229-15912339)
chr1 (97-207)||(44510238-44510349)
chr1 (108-207)||(16688178-16688278)
chr1 (108-207)||(37538851-37538951)
chr1 (107-208)||(16661557-16661658)
chr1 (97-205)||(5950470-5950579)
chr1 (97-168)||(13351711-13351782)
chr1 (97-206)||(5858391-5858501)
chr1 (131-206)||(8889717-8889793)
chr1 (132-189)||(2246052-2246109)
chr1 (101-201)||(3076330-3076431)
chr1 (132-189)||(12449005-12449062)
chr1 (132-189)||(15959678-15959735)
chr1 (132-189)||(32624043-32624100)
chr1 (131-207)||(35366222-35366299)
chr1 (132-190)||(39555623-39555681)
chr1 (131-207)||(41063806-41063884)
chr1 (132-189)||(2126104-2126161)
chr1 (132-189)||(43667341-43667398)
chr1 (111-187)||(10558796-10558872)
chr1 (152-207)||(13352180-13352236)
chr1 (95-189)||(46818540-46818634)
chr1 (132-193)||(28016779-28016841)
chr1 (110-172)||(32318615-32318677)
chr1 (108-201)||(33431601-33431695)
chr1 (131-189)||(35884272-35884330)
chr1 (131-189)||(43656078-43656136)
chr1 (131-189)||(43765359-43765417)
chr1 (132-201)||(44148861-44148931)
chr1 (138-207)||(46803690-46803760)
chr1 (112-186)||(51338938-51339012)
chr1 (132-189)||(11241093-11241150)
chr1 (112-189)||(24728665-24728742)
chr1 (132-189)||(35691459-35691516)
chr1 (133-189)||(47014529-47014585)
chr1 (131-189)||(18852284-18852342)
chr1 (131-189)||(23873868-23873926)
chr1 (131-189)||(38942482-38942540)
chr1 (131-189)||(46949382-46949440)
chr1 (112-186)||(51840536-51840610)
chr1 (132-189)||(6785522-6785579)
chr1 (132-189)||(6786904-6786961)
chr1 (132-189)||(7468001-7468058)
chr1 (132-189)||(24190535-24190592)
chr1 (108-189)||(28120793-28120874)
chr1 (132-189)||(30221791-30221848)
chr1 (132-189)||(32983210-32983266)
chr1 (132-189)||(40718744-40718801)
chr1 (132-189)||(42965854-42965910)
chr1 (133-178)||(45226205-45226250)
chr1 (107-188)||(47302945-47303025)
chr1 (108-204)||(52841467-52841564)
chr1 (132-189)||(52984999-52985056)
chr1 (133-189)||(35941904-35941960)
chr1 (159-206)||(39151194-39151242)
chr1 (132-168)||(47600098-47600134)
chr1 (132-167)||(6787050-6787085)
chr1 (131-189)||(9128104-9128162)
chr1 (131-189)||(15285864-15285922)
chr1 (131-189)||(25990809-25990867)
chr1 (131-189)||(26479800-26479858)
chr1 (131-189)||(28916556-28916614)
chr1 (131-189)||(31970350-31970408)
chr1 (131-189)||(40220117-40220175)
chr1 (131-189)||(40935654-40935712)
chr1 (131-189)||(40960515-40960573)
chr1 (131-189)||(49924480-49924538)
chr1 (135-188)||(1034926-1034979)
chr1 (132-189)||(3861733-3861790)
chr1 (133-178)||(23392215-23392260)
chr1 (132-189)||(25391748-25391804)
chr1 (132-189)||(33369617-33369673)
chr1 (132-189)||(46543048-46543105)
chr1 (139-176)||(50370034-50370071)
chr1 (108-176)||(16854182-16854250)
chr1 (131-175)||(28017719-28017763)
chr1 (131-175)||(35189262-35189306)
[»] chr5 (48 HSPs)
chr5 (97-203)||(3463839-3463945)
chr5 (97-208)||(8959671-8959783)
chr5 (97-204)||(16153368-16153475)
chr5 (107-207)||(1144510-1144611)
chr5 (107-207)||(29307206-29307307)
chr5 (97-207)||(5736259-5736370)
chr5 (108-204)||(5369053-5369150)
chr5 (107-208)||(28907110-28907211)
chr5 (107-208)||(28943505-28943606)
chr5 (97-189)||(12912332-12912424)
chr5 (108-189)||(30703643-30703724)
chr5 (132-207)||(8506497-8506573)
chr5 (132-201)||(19413207-19413277)
chr5 (133-206)||(32432319-32432393)
chr5 (132-189)||(11261922-11261979)
chr5 (107-163)||(5659584-5659640)
chr5 (108-188)||(38280889-38280969)
chr5 (134-189)||(41625549-41625604)
chr5 (132-189)||(20644080-20644137)
chr5 (132-189)||(34425396-34425453)
chr5 (108-189)||(42273689-42273770)
chr5 (133-188)||(32111069-32111124)
chr5 (132-189)||(6686450-6686508)
chr5 (108-170)||(10153985-10154047)
chr5 (131-189)||(13146792-13146850)
chr5 (108-189)||(6391911-6391992)
chr5 (131-207)||(18718644-18718721)
chr5 (133-201)||(25840931-25841000)
chr5 (132-189)||(37522627-37522684)
chr5 (132-189)||(38130154-38130211)
chr5 (132-189)||(39505271-39505328)
chr5 (133-189)||(5984146-5984202)
chr5 (134-189)||(43454361-43454416)
chr5 (131-189)||(31690658-31690716)
chr5 (132-189)||(20039168-20039225)
chr5 (111-188)||(42104287-42104364)
chr5 (132-189)||(43590000-43590057)
chr5 (134-189)||(8146051-8146106)
chr5 (134-176)||(104265-104307)
chr5 (131-189)||(12638952-12639010)
chr5 (131-189)||(16286121-16286179)
chr5 (131-189)||(20914922-20914980)
chr5 (131-189)||(24432438-24432496)
chr5 (131-189)||(25962486-25962544)
chr5 (131-189)||(31316839-31316897)
chr5 (134-168)||(37562821-37562855)
chr5 (110-171)||(17351432-17351493)
chr5 (133-166)||(32017770-32017803)
[»] scaffold0330 (1 HSPs)
scaffold0330 (107-207)||(3209-3310)
[»] chr4 (67 HSPs)
chr4 (97-204)||(28142637-28142745)
chr4 (108-207)||(46070535-46070634)
chr4 (97-189)||(32410357-32410449)
chr4 (101-207)||(5064667-5064774)
chr4 (107-204)||(28318434-28318530)
chr4 (97-206)||(37911913-37912023)
chr4 (97-207)||(47516203-47516314)
chr4 (97-201)||(29511456-29511559)
chr4 (97-202)||(49080286-49080392)
chr4 (97-207)||(5841791-5841902)
chr4 (97-166)||(23978169-23978238)
chr4 (97-207)||(8178251-8178362)
chr4 (108-207)||(8013101-8013201)
chr4 (108-189)||(4058755-4058836)
chr4 (97-166)||(40411130-40411199)
chr4 (131-207)||(53848523-53848600)
chr4 (133-188)||(21722714-21722769)
chr4 (132-189)||(5483309-5483366)
chr4 (108-189)||(7654657-7654738)
chr4 (132-189)||(16604877-16604934)
chr4 (132-189)||(17794572-17794629)
chr4 (132-189)||(20281655-20281712)
chr4 (132-189)||(26916389-26916446)
chr4 (132-189)||(41414642-41414699)
chr4 (132-189)||(47867943-47868000)
chr4 (133-189)||(5815534-5815590)
chr4 (111-189)||(32323293-32323371)
chr4 (132-189)||(2229311-2229368)
chr4 (132-189)||(14332824-14332881)
chr4 (108-189)||(24940405-24940486)
chr4 (132-201)||(48793648-48793716)
chr4 (131-178)||(32203276-32203323)
chr4 (134-189)||(56318101-56318156)
chr4 (132-201)||(8683324-8683394)
chr4 (131-189)||(29180416-29180474)
chr4 (131-189)||(29899773-29899831)
chr4 (131-189)||(30777545-30777603)
chr4 (132-201)||(42915594-42915664)
chr4 (131-189)||(50768503-50768561)
chr4 (111-188)||(1585379-1585456)
chr4 (132-189)||(10069761-10069818)
chr4 (148-189)||(16473828-16473869)
chr4 (132-189)||(39078221-39078277)
chr4 (132-189)||(55580734-55580791)
chr4 (156-207)||(36542894-36542946)
chr4 (111-187)||(50145779-50145854)
chr4 (131-191)||(55937705-55937765)
chr4 (131-189)||(3043171-3043229)
chr4 (131-189)||(10591507-10591565)
chr4 (131-189)||(28669032-28669090)
chr4 (131-189)||(30011958-30012016)
chr4 (131-189)||(30776488-30776546)
chr4 (132-201)||(35310760-35310830)
chr4 (131-189)||(37788509-37788567)
chr4 (131-189)||(39969993-39970051)
chr4 (131-189)||(43980556-43980614)
chr4 (131-189)||(47807253-47807311)
chr4 (131-189)||(53677483-53677541)
chr4 (108-189)||(8018420-8018501)
chr4 (132-165)||(17186850-17186883)
chr4 (110-167)||(17799187-17799244)
chr4 (112-189)||(25268523-25268600)
chr4 (132-165)||(29203570-29203603)
chr4 (101-186)||(40553802-40553887)
chr4 (133-189)||(9798079-9798135)
chr4 (132-168)||(20716244-20716280)
chr4 (112-176)||(25297266-25297330)
[»] chr7 (52 HSPs)
chr7 (97-207)||(35887987-35888098)
chr7 (97-189)||(31768999-31769091)
chr7 (108-207)||(39170576-39170676)
chr7 (97-205)||(38260347-38260456)
chr7 (131-207)||(10248593-10248671)
chr7 (108-189)||(4910670-4910751)
chr7 (108-189)||(6191087-6191168)
chr7 (132-189)||(18102596-18102653)
chr7 (132-189)||(45486021-45486078)
chr7 (132-189)||(46760294-46760351)
chr7 (108-207)||(3778020-3778120)
chr7 (132-203)||(22632155-22632227)
chr7 (132-191)||(25944642-25944701)
chr7 (131-189)||(40560442-40560500)
chr7 (132-193)||(35923318-35923379)
chr7 (113-189)||(35068886-35068962)
chr7 (131-189)||(3157496-3157554)
chr7 (132-193)||(25737659-25737721)
chr7 (132-189)||(12632381-12632438)
chr7 (132-189)||(14805936-14805992)
chr7 (132-189)||(15252930-15252986)
chr7 (108-189)||(19912806-19912887)
chr7 (131-189)||(19933051-19933109)
chr7 (131-189)||(19964190-19964248)
chr7 (131-189)||(41815689-41815747)
chr7 (132-201)||(47779670-47779740)
chr7 (131-189)||(48879448-48879506)
chr7 (111-168)||(4069048-4069105)
chr7 (132-189)||(20123717-20123774)
chr7 (111-167)||(8015732-8015788)
chr7 (97-189)||(21654117-21654209)
chr7 (139-193)||(11780090-11780145)
chr7 (108-202)||(29713231-29713326)
chr7 (131-189)||(9818528-9818586)
chr7 (131-189)||(10720453-10720511)
chr7 (134-188)||(16917539-16917593)
chr7 (131-189)||(18206315-18206373)
chr7 (131-189)||(23106513-23106571)
chr7 (136-170)||(24151638-24151672)
chr7 (131-189)||(32491103-32491161)
chr7 (131-189)||(41889231-41889289)
chr7 (131-189)||(43107901-43107959)
chr7 (131-189)||(45598964-45599022)
chr7 (131-189)||(47383466-47383524)
chr7 (131-189)||(48937885-48937943)
chr7 (132-189)||(35181253-35181310)
chr7 (132-168)||(9158155-9158191)
chr7 (133-189)||(14574631-14574687)
chr7 (133-189)||(31549940-31549996)
chr7 (97-189)||(35084097-35084189)
chr7 (131-171)||(36576478-36576518)
chr7 (132-164)||(47557663-47557695)
[»] scaffold0565 (1 HSPs)
scaffold0565 (101-207)||(5894-6001)
[»] scaffold0010 (1 HSPs)
scaffold0010 (108-207)||(160938-161038)
[»] scaffold0774 (1 HSPs)
scaffold0774 (132-189)||(3466-3523)
[»] scaffold0045 (1 HSPs)
scaffold0045 (132-189)||(78023-78080)
[»] scaffold0300 (1 HSPs)
scaffold0300 (132-193)||(606-668)
[»] scaffold0018 (1 HSPs)
scaffold0018 (132-193)||(154927-154988)
[»] scaffold0442 (1 HSPs)
scaffold0442 (133-189)||(10112-10168)
[»] scaffold0111 (1 HSPs)
scaffold0111 (111-189)||(40224-40302)
[»] scaffold0009 (1 HSPs)
scaffold0009 (132-201)||(157860-157930)
[»] scaffold1786 (1 HSPs)
scaffold1786 (133-178)||(914-959)
[»] scaffold0495 (1 HSPs)
scaffold0495 (131-189)||(4691-4749)
[»] scaffold0062 (1 HSPs)
scaffold0062 (132-189)||(44809-44866)
[»] scaffold0132 (2 HSPs)
scaffold0132 (133-189)||(1079-1135)
scaffold0132 (133-189)||(9039-9095)


Alignment Details
Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 4987972 - 4988095
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4987972 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgt 4988071  T
Q  196 tacaaactactacctatattttaa 219  Q
    ||||||||||||||||||||||||    
T  4988072 tacaaactactacctatattttaa 4988095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 4032016 - 4032128
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  4032016 tttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatttcaaagataacacaaaaaactatgt 4032115  T
Q  196 tacaaactactac 208  Q
    |||||||||||||    
T  4032116 tacaaactactac 4032128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 16013562 - 16013454
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  16013562 tttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaactatgt 16013463  T
Q  196 tacaaacta 204  Q
    |||||||||    
T  16013462 tacaaacta 16013454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 16524418 - 16524518
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16524418 ttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactac 16524517  T
Q  206 t 206  Q
    |    
T  16524518 t 16524518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 3888456 - 3888565
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa-aactatgt 195  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  3888456 tttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctataaaacttatttcaaatataacacaaataactatgt 3888555  T
Q  196 tacaaactac 205  Q
    ||| ||||||    
T  3888556 tacgaactac 3888565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 15830724 - 15830816
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| ||| |||||||||| |||  ||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||    
T  15830724 tttgcactctttttcattttatctgcaatcaactatcaatgaaaattttttttacatcttcctattaaacttattttaaaaataacacaaaaa 15830816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 14573243 - 14573165
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| ||| |||| |||||||||||||| || |||||||    
T  14573243 cattttctccataatcaacaaacaatgaaaattatttttacatcatcccataatacttatttcaaagaaaatacaaaaa 14573165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 3095838 - 3095758
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || ||||||||   |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  3095838 tttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactt-ttccaaagaaaacacaaaaa 3095758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 21963984 - 21964076
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||| |||| |||||||| || |||||  |||||| ||||||||||||||||||| | ||||||||||||| || || ||||||||||    
T  21963984 tttgttctcttttttattttctccatgatcaataaccaataaaaattatttttacatctttccataaaacttattttaaggagaacacaaaaa 21964076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 5881871 - 5881796
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataaca 183  Q
    |||||||||||||||||| ||  |||||| |||||| |||||||||||| |||| ||||||| | |||||||||||    
T  5881871 tttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaacttagtccaaagataaca 5881796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 35129174 - 35129092
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattattt-ttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || |||| |||  ||||||||||||| ||| ||||||||||||||||||||| || |||||| ||||||||||    
T  35129174 tttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactttttccaaagaaaacacaaaaa 35129092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 11082340 - 11082283
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||| |||||||||||| || |||||| ||||||||||    
T  11082340 ccaatgaaaattgtttttacatctccctataaaactttttccaaagaaaacacaaaaa 11082283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 21542484 - 21542541
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  21542484 ccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 21542541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 30949162 - 30949254
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||| |||| ||||||||||||||     |||||||| ||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  30949162 tttgttctcctttttattttctctataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 30949254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 5300696 - 5300658
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaactta 169  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  5300696 accaatgaaaattgtttttacatcttcctataaaactta 5300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 7274970 - 7274900
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||| || || |||||||||| ||||||    
T  7274970 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaatacaaaaaactatgctacaaa 7274900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 12461524 - 12461462
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctat-aaaacttatttcaaagataacacaaaaactat 193  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||||| || | |||||||||    
T  12461524 ccaatgaaaattgtttttacatctttctataaaaacttatttcaaagaaaataaaaaaactat 12461462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 17598354 - 17598412
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | |||||| ||||| |||||| ||||||||||    
T  17598354 accaatgagaattatttttacatctttccataaaatttattccaaagagaacacaaaaa 17598412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 30794287 - 30794230
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| | ||||||||||||||||||||||||||| |||| | |||| |||||    
T  30794287 ccaatgaaaaatgtttttacatcttcctataaaacttattccaaataaaacataaaaa 30794230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 5822123 - 5822075
Alignment:
Q  138 aaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    |||||| |||||||||||| |||| ||||||||| ||||||||||||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaa 5822075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 14709899 - 14709836
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaa 175  Q
    |||||||| ||||||||  ||||||||||||||||||||| | ||| | | |||||||||||||    
T  14709899 attttctccataatcaataaccaatgaaaattatttttactttttcttgtgaaacttatttcaa 14709836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 10227973 - 10228031
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || ||||| ||||    
T  10227973 accaatgagaattatttttacatctttcgatgaaacttatttcaaggagaacactaaaa 10228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 16870923 - 16870830
Alignment:
Q  97 tttgctctcattttcattttctctataatcaacta-ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||  ||||||||||| |||||  || || ||||| ||| ||  ||||| ||||| |||| |||||||||| ||||||||||||||||    
T  16870923 tttgctctccctttcattttctttataactaaataaccaataaaagttgattttaaatctttctatgaaacttattttaaagataacacaaaaa 16870830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 31107232 - 31107313
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| |||||||||||    |||| ||||| |||||||||| ||| ||||||  || ||||||||| ||||||||||    
T  31107232 tttcattttttctataatcaatagtcaataaaaatcatttttacattttcttataaattttttttcaaagaaaacacaaaaa 31107313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 34177736 - 34177679
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||| ||||||||  || || |||||| ||||||||||    
T  34177736 ccaatgaaaattgtttttacatctccctataaatttttttccaaagaaaacacaaaaa 34177679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 374126 - 374218
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||| |||| ||||||||||||||     ||||||||||||||||| |||||||| | || |||||||||  || || ||||||||||    
T  374126 tttgttctcctttttattttctctataatttttaaccaatgaaaattatttatacatctttccatgaaacttattctaaggagaacacaaaaa 374218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 32010133 - 32010244
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  32010133 tttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactatat 32010232  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  32010233 tacaaactacta 32010244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 26998348 - 26998457
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| |    
T  26998348 tttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactatct 26998447  T
Q  196 tacaaactac 205  Q
    ||||||||||    
T  26998448 tacaaactac 26998457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 32273702 - 32273807
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  32273702 tttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatttcaaagataacacaaaaaactatgt 32273801  T
Q  196 tacaaa 201  Q
    ||||||    
T  32273802 tacaaa 32273807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 38071027 - 38071135
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  38071027 tttgctct-attttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatttcaaagataacacaaaaaactatgt 38071125  T
Q  196 tacaaactac 205  Q
    ||||||||||    
T  38071126 tacaaactac 38071135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 4891766 - 4891656
Alignment:
Q  99 tgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca--aaaactatgtt 196  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  4891766 tgctctctttttcattttctttataatcaactaccaataaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaaactatgtt 4891667  T
Q  197 acaaactacta 207  Q
    |||||||||||    
T  4891666 acaaactacta 4891656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 20380154 - 20380256
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  20380154 tttgctctcgttttcattttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatttcaaagataacacaaaaaactatgt 20380253  T
Q  196 tac 198  Q
    |||    
T  20380254 tac 20380256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 44442162 - 44442271
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa--aaactatg 194  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||||| ||| |||||||||  ||||||||    
T  44442162 tttgctatctttttcattttctctataatcaactatcaatgaaaattgtttttacatcttcatataaaatttattttaaaaataacacaaataaactatg 44442261  T
Q  195 ttacaaacta 204  Q
    ||||||||||    
T  44442262 ttacaaacta 44442271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 9709555 - 9709652
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaacta 204  Q
    |||||||||||| ||||||||  || |||||||||| |||| ||||||||||||||||||| |||||| |||||||||| |||||||||| |||||||    
T  9709555 tttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaaggataacacaagaaactatgttgcaaacta 9709652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 14874005 - 14874086
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||   ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  14874005 tttcattttctccataaccaatagccaatgaaaattatttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 14874086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 16495037 - 16494972
Alignment:
Q  114 tttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagata 180  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16495037 tttctctata-tcaactatcaatgaaaattgtttttacatcttcctataaaacttatttcaaagata 16494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 45660407 - 45660488
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||   |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  45660407 tttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 45660488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 28858375 - 28858432
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  28858375 ccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaa 28858432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 33198749 - 33198668
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||  |||||| |||||| |||||||||||||||||||||||| ||| ||||| ||||||||||    
T  33198749 tttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctataaaacttcttttaaagaaaacacaaaaa 33198668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 9864834 - 9864756
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| |||||||| | |||||||||||| ||||||| |||||| || ||||||||| |||||| ||||||||||    
T  9864834 cattttctccataatcaattgccaatgaaaattgtttttacctcttcccatgaaacttattccaaagaaaacacaaaaa 9864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 11031025 - 11030951
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaacta 204  Q
    |||||| |||||| |||||| ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  11031025 accaataaaaattgtttttatatctttctataaaacttattttaaagataagacaagaaactatgttacaaacta 11030951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 12938288 - 12938365
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||   |||||||||||| ||||||||  |||||||||||||||||||||||| | ||||||||    
T  12938288 attttctccataatcaatagccaatgaaaattgtttttacactttcctataaaacttatttcaaagaaagcacaaaaa 12938365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 19264166 - 19264223
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  19264166 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 19264223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 28599242 - 28599185
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||    
T  28599242 ccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaa 28599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 30830721 - 30830633
Alignment:
Q  101 ctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| ||||||||||||| ||||||||  |||||||||| || |||||| ||||||  || |||||||||||||| | ||||||||||    
T  30830721 ctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcatgaaacttatttcaaaaaaaacacaaaaa 30830633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 40584516 - 40584436
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    |||||||||  | |||| |||| ||||||||||||| |||||||||||||| ||||||||||||  ||||| |||||||||    
T  40584516 tttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccataaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 43415468 - 43415524
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaa 43415524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 45085325 - 45085380
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || |||||||    
T  45085325 aatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaa 45085380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 11617090 - 11617136
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  11617090 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaaga 11617136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 25572111 - 25572181
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||| ||||| |||||||||| ||||||    
T  25572111 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 25572181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 3201392 - 3201449
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||| ||||||||||| || |||||| ||||||||||    
T  3201392 ccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacacaaaaa 3201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 6110293 - 6110236
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || | |||| ||||||||||    
T  6110293 ccaatgaaaattgtttttacatcttcctataaaactttttccgaagaaaacacaaaaa 6110236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 8032786 - 8032705
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||  | | |||||| |||||| |||||||||||||||||||||||||   |||| ||||||||||||    
T  8032786 tttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaacttaacacaaaaataacacaaaaa 8032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 29524135 - 29524078
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||| ||||||||||    
T  29524135 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaa 29524078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 35517189 - 35517246
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||  ||||||||||| || |||||| ||||||||||    
T  35517189 ccaatgaaaattatttttacatctcactataaaactttttccaaagaaaacacaaaaa 35517246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 41528322 - 41528379
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||   |||||||||| ||||||||||    
T  41528322 ccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaa 41528379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 8701668 - 8701738
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataaca-caaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||| ||||  |||||||||| ||||||    
T  8701668 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacataaaaaactatgctacaaa 8701738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 10478239 - 10478297
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  10478239 accaatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 10478297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 24204623 - 24204569
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    ||||||||||||  |||||||| ||||||||||||||||| |||||| |||||||    
T  24204623 ccaatgaaaattgattttacatattcctataaaacttattccaaagaaaacacaa 24204569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 43075811 - 43075869
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||||||| || |||| |||||    
T  43075811 accaatgaaaattatttttacatctttccatgaaacttatttcaaggagaacataaaaa 43075869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 33677550 - 33677586
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaactta 169  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33677550 caatgaaaattgtttttacatcttcctataaaactta 33677586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 35115919 - 35115859
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 171  Q
    ||||||||| |||| |||  || |||||||||| |||||||||||| ||||||||||||||    
T  35115919 cattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttatt 35115859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 40808811 - 40808744
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||| |||||||||||||| || ||||||||| |||||| ||||| |||||||||| ||||||    
T  40808811 aatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaaactatgctacaaa 40808744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 921664 - 921566
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaag-ataacacaa-aaactatgttacaaactac 205  Q
    |||||||||||||||||| ||  | |||| ||||||||||||| |||||  ||| ||||||| ||||||| ||||||||| |||||||  ||||||||||    
T  921664 tttcattttctctataattaataatcaataaaaattatttttaaatctttttatgaaactta-ttcaaagaataacacaagaaactatactacaaactac 921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 29514148 - 29514089
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatctt 156  Q
    |||| ||||||||| ||||||||||||||     ||||||||||||||||||||||||||    
T  29514148 tttgttctcatttttattttctctataatttttaaccaatgaaaattatttttacatctt 29514089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 792451 - 792393
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  792451 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 792393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 14565468 - 14565410
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  14565468 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 14565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 28678765 - 28678688
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    |||||||||||||||||||||  |||||| |||| | ||||||||| || |||||| |||||||  ||| |||||||||    
T  28678765 tttcattttctctataatcaataaccaat-aaaaatgtttttacatttttctataacacttattcaaaaaataacacaa 28678688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 29514570 - 29514512
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||||   || |||||||||  || |||||||||||||    
T  29514570 accaatgaaaattatttttacatcttttcatgaaacttattctaaggataacacaaaaa 29514512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 43451566 - 43451624
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || |||||||||  || || ||||||||||    
T  43451566 accaatgaaaattatttttacatctttccatgaaacttattctaaggagaacacaaaaa 43451624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 44803959 - 44804017
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  44803959 accaatgagaattatttttacatctttccattaaacttattccaaggagaacacaaaaa 44804017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 5963267 - 5963323
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| ||||||||||||||||| ||| ||||||||||||  ||||| ||||||||||    
T  5963267 ccaataaaaattatttttacatc-tcccataaaacttattctaaagaaaacacaaaaa 5963323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 16179682 - 16179633
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagata 180  Q
    |||||| ||| || |||||||||||| |||||||||||||||||| ||||    
T  16179682 accaataaaatttgtttttacatctttctataaaacttatttcaaggata 16179633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 21539819 - 21539876
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  21539819 ccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 21539876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 6766026 - 6765970
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||||| ||||||||||||||||||||| ||||| ||| || |||| |||||    
T  6766026 caataaaaattgtttttacatcttcctataaaatttattccaatgaaaacataaaaa 6765970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 18834039 - 18833947
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||| |||| |||||||| ||||| |   |||||||| |||| |||||||||||| | || ||||||||| |||  ||||||||||||    
T  18834039 tttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaacttattccaagaataacacaaaaa 18833947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 41362438 - 41362327
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41362438 tttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgt 41362339  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  41362338 tacaaactacta 41362327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 4039012 - 4038902
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaactatgtt 196  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4039012 tttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatttcaaaaataacacaaaaactatgtt 4038913  T
Q  197 acaaactacta 207  Q
    |||||||||||    
T  4038912 acaaactacta 4038902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 8673410 - 8673518
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  8673410 tttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatttcaaatataacacaaaaaactatgt 8673509  T
Q  196 tacaaacta 204  Q
    |||||||||    
T  8673510 tacaaacta 8673518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 17336771 - 17336882
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  17336771 tttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatttcaaagatgacacaaaaaactatgt 17336870  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  17336871 tacaaactacta 17336882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 38072192 - 38072303
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||| |||||||||||||| |||||||||||    
T  38072192 tttgctctttttttcattttctctataatcaactaccaatgaaaattgtttttacatttttttataaaacttaattcaaagataacacaaaaaactatgt 38072291  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  38072292 tacaaactacta 38072303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 25195177 - 25195086
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  25195177 tttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa-ttatttcaaagataacacaaaaa 25195086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 17314859 - 17314970
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa-ctatgt 195  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||| ||| ||| ||||||||||||| ||||||||| ||||||    
T  17314859 tttgctctccttttcattttctctataatcaactaccaatgaaaattgcttttacattttcgtatgaaatttatttcaaagatgacacaaaaagctatgt 17314958  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  17314959 tacaaactacta 17314970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 2628295 - 2628184
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  |||||||||||| |||| |||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  2628295 tttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttattttaaggataacacaagaaactatgt 2628196  T
Q  196 tacaaactacta 207  Q
    | ||||||||||    
T  2628195 tgcaaactacta 2628184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 8745612 - 8745723
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  ||| ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  8745612 tttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaagaataacacaagaaactatgt 8745711  T
Q  196 tacaaactacta 207  Q
    | ||||||||||    
T  8745712 tgcaaactacta 8745723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 26954512 - 26954442
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    |||||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26954512 tttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaaga 26954442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 29147357 - 29147257
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    |||||||||||||||||||||| || |||||||||| ||||| ||||||| ||| |||||||||| |  |||||||||| ||| ||||||||||||||||    
T  29147357 tttcattttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaacttattttatggataacacaagaaattatgttacaaactact 29147258  T
Q  207 a 207  Q
    |    
T  29147257 a 29147257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 28497232 - 28497158
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactacta 207  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  28497232 aatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactatgttgcaaactacta 28497158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 17713286 - 17713363
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactacta 207  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||||| |||| |||||    
T  17713286 accaatgaaaattgtttttaaatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaaatacta 17713363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 4480841 - 4480897
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaac 190  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaac 4480897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 7022499 - 7022442
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  7022499 ccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaa 7022442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 26483572 - 26483653
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || ||||||||   |||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||    
T  26483572 tttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaa 26483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 36190836 - 36190893
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  36190836 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 36190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 43216441 - 43216386
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  43216441 aatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 43216386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 5217432 - 5217510
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    |||||||||||||||||  ||  |||||| |||||| |||||||||||| |||| ||||||||||||| ||||||||||    
T  5217432 tttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaa 5217510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 7858568 - 7858649
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || ||||||||    ||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||||    
T  7858568 tttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaa 7858649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 29920364 - 29920307
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||    
T  29920364 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagataacacaaaaa 29920307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 31734179 - 31734236
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||    
T  31734179 ccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaacacaaaaa 31734236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 34890270 - 34890213
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  34890270 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 34890213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 41791591 - 41791543
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattat 145  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  41791591 tttgctctcttttttattttctctataatcaactaccaatgaaaattat 41791543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 35525652 - 35525707
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||    
T  35525652 caatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaacacaaaa 35525707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 14693434 - 14693484
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataaca 183  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  14693434 caatgaaaattgtttttacatcttcttataaaatttatttcaaagataaca 14693484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 8711941 - 8711997
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||    
T  8711941 ccaatgaaaattatttttacatcttcctataaaactt-tttccaaaaaaacacaaaaa 8711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 13143828 - 13143885
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||||||| |||||| |||||| || ||||||||||    
T  13143828 ccaatgaaaattgtttttacatcttcctatgaaacttttttcaacgaaaacacaaaaa 13143885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 41086482 - 41086425
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||  |||||||||| ||||||||| ||||||||||    
T  41086482 ccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaa 41086425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 6401657 - 6401741
Alignment:
Q  105 cattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||| |||||| ||  ||||||| ||||| ||||||||||||  ||  |||||||||||||  ||||||||||||    
T  6401657 cattttcattttctttataattaataaccaatggaaattgtttttacatctttttaggaaacttatttcaagaataacacaaaaa 6401741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 13144040 - 13143984
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaac-ttatttcaaagataacacaaaaa 189  Q
    |||||||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  13144040 aatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaa 13143984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 27819688 - 27819796
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  ||| ||||||||||||| |||  | |||| |||| | ||||||||||||  ||||||||||||||  | ||||| |||| |||||||||    
T  27819688 tttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaacttatttgtaggataatacaagaaactatgt 27819787  T
Q  196 tacaaacta 204  Q
    |||||||||    
T  27819788 tacaaacta 27819796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 39187297 - 39187353
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa 187  Q
    |||||||||||||||||||||||||| | |||||||||||| ||| || ||||||||    
T  39187297 accaatgaaaattatttttacatctttccataaaacttattccaacgagaacacaaa 39187353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 34713592 - 34713650
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||  | ||||||||||    
T  34713592 accaatgagaattatttttacatctttctagaaaacttatttcaagaaaaacacaaaaa 34713650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 35344431 - 35344489
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  35344431 accaatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 35344489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 14576249 - 14576213
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaact 167  Q
    |||||||||||||||||||||||||| ||||||||||    
T  14576249 accaatgaaaattatttttacatctttctataaaact 14576213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 15958005 - 15957953
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||| |||||||    
T  15958005 aatgaaaattgtttttacttattcctataaaacttttttcaaagaaaacacaa 15957953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 25321717 - 25321629
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca 185  Q
    ||||||||| |||| |||||||| |||||     ||| |||||||||||||||||||||| | |||||||||||| ||| || ||||||    
T  25321717 tttgctctcctttttattttctccataatttttaacctatgaaaattatttttacatctttccataaaacttattccaaggagaacaca 25321629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 44663910 - 44663830
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa 187  Q
    |||||||||| ||  |||||||   ||||| ||||||||||||||||||| | |||||| ||||| |||||| ||||||||    
T  44663910 ttttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataaaatttattccaaagaaaacacaaa 44663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 8712587 - 8712642
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    |||||| |||||| |||||||||||| |||||||||||||| |||  |||||||||    
T  8712587 accaataaaaattgtttttacatctttctataaaacttattccaataataacacaa 8712642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 33563606 - 33563567
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttattt 172  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  33563606 caatgaaaattgtttttacatcttcccataaaacttattt 33563567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 33851117 - 33851062
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| ||||||||||||||||| | || ||||||||| |||||| ||||||||||    
T  33851117 aatgagaattatttttacatctttccatgaaacttattccaaagagaacacaaaaa 33851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 34158386 - 34158351
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaactt 168  Q
    ||||||||||| ||||||||||||||||||||||||    
T  34158386 caatgaaaattgtttttacatcttcctataaaactt 34158351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 3100017 - 3100075
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  3100017 accaatgagaattatttttacatctttccatgaaacttattccaacgagaacacaaaaa 3100075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 27752650 - 27752708
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  27752650 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 27752708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 35260121 - 35260179
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  35260121 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 35260179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 35346401 - 35346343
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||| ||||||||| || ||||||||||    
T  35346401 accaatgagaattatttttacatctttccatgaaatttatttcaaggagaacacaaaaa 35346343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 44052685 - 44052743
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | | |||||||||| ||| || ||||||||||    
T  44052685 accaatgagaattatttttacatctttccagaaaacttattccaaggagaacacaaaaa 44052743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 44411306 - 44411248
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || || |||||||    
T  44411306 accaatgagaattatttttacatctttccatgaaacttatttcaaggagaatacaaaaa 44411248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 16879512 - 16879431
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| | ||||||||    |||| |||||| ||||||||| |||| || ||| |||||||||||| ||||||||||    
T  16879512 tttcattttcaccataatcaatagtcaataaaaattgtttttacatattcccatgaaatttatttcaaagaaaacacaaaaa 16879431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 34899971 - 34900028
Alignment:
Q  114 tttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 171  Q
    |||||| || |||||  |||||| ||||||||||||| ||| ||||||||||||||||    
T  34899971 tttctccatgatcaataaccaatcaaaattatttttaaatcctcctataaaacttatt 34900028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 35456120 - 35456064
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||| | |||| |||||    
T  35456120 ccaatgaaaattgtttttacatctttctataaaactt-tttcaaaaaaaacataaaaa 35456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 2052898 - 2052934
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaactt 168  Q
    |||||||||||| |||||||||||||| |||||||||    
T  2052898 ccaatgaaaattgtttttacatcttcccataaaactt 2052934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 4046990 - 4046919
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagata--acacaaaaactatgttacaaa 201  Q
    |||||||||||||||||||||| || | || |||||||||  ||||| |  |||||||||||||| ||||||    
T  4046990 ccaatgaaaattatttttacatatttccatgaaacttattataaagaaaacacacaaaaactatgctacaaa 4046919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 8709881 - 8709825
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| | ||||||| |||||| || | |||||||||||||| ||||||||||    
T  8709881 caatgaaaaatgtttttacttcttcccatgagacttatttcaaagaaaacacaaaaa 8709825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 16358206 - 16358151
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||| |||| |||||    
T  16358206 caatgaaaattgattttacatcttcctatgaaactt-tttcaaagaaaacaaaaaaa 16358151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 28348674 - 28348730
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    |||||| ||||| ||||||||| |||||||||||||| || |||||| || ||||||    
T  28348674 ccaatggaaattgtttttacatattcctataaaactttttccaaagaaaatacaaaa 28348730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 22479143 - 22479032
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22479143 tttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgt 22479044  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  22479043 tacaaactacta 22479032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 10114940 - 10115051
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  10114940 tttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaattatgt 10115039  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  10115040 tacaaactacta 10115051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 10252040 - 10252151
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa-aactatgt 195  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||    
T  10252040 tttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgt 10252139  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  10252140 tacaaactacta 10252151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 22456097 - 22455986
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  22456097 tttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatttcaaagttaacacaaaaaactatgt 22455998  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  22455997 tacaaactacta 22455986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 21214270 - 21214382
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  21214270 tttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatttcaaaaataacacaaaaaactatgt 21214369  T
Q  196 tacaaactactac 208  Q
    |||||||||||||    
T  21214370 tacaaactactac 21214382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 6784330 - 6784465
Alignment:
Q  75 caaaggaaaattaaatgcaa-agtttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttc 173  Q
    ||||| |||||||||||||  | |||| |||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||     
T  6784330 caaagaaaaattaaatgcatcaatttgatctctttttcatttattctataatcaactacgaatgaaaattatttttacatcttcctataaaatttatttg 6784429  T
Q  174 aaagataacac-aaaaactatgttacaaactactac 208  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6784430 aaagataacacaaaaaactatgttacaaactactac 6784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 10014308 - 10014409
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa-aactatgttacaaactac 205  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||    
T  10014308 tttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgttacaaactac 10014407  T
Q  206 ta 207  Q
    ||    
T  10014408 ta 10014409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 38401413 - 38401501
Alignment:
Q  101 ctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38401413 ctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatttcaaagataacacaaaaa 38401501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 47444062 - 47443955
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    |||||| || |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  47444062 tttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatctt-ctataaaatttatttcaaagataacacaaaaaactatgt 47443964  T
Q  196 tacaaacta 204  Q
    |||||||||    
T  47443963 tacaaacta 47443955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 8097107 - 8096996
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  |||||||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8097107 tttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatttcaaggataacacaagaaactatgt 8097008  T
Q  196 tacaaactacta 207  Q
    | ||||||||||    
T  8097007 tgcaaactacta 8096996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 2994507 - 2994393
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacat----cttcctataaaacttatttcaaagataacac-aaaaact 191  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||    ||||||||||||||||||||||  ||||||| |||||||    
T  2994507 tttgctctctttttcattttctctataatcaactaccaatgaaaatt-gttttacatcttccttcctataaaacttatttcaagcataacacaaaaaact 2994409  T
Q  192 atgttacaaactacta 207  Q
    ||||||||||||||||    
T  2994408 atgttacaaactacta 2994393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 25242267 - 25242156
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    |||| |||| |||| |||||||||||||||||||| ||  ||||||| ||||| |||||| ||||||||||||||| |||||||||||| ||||||||||    
T  25242267 tttgttctcttttttattttctctataatcaactatcaccgaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgt 25242168  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  25242167 tacaaactacta 25242156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 48291851 - 48291931
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaag 177  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  48291851 tttgctctctttttcattttttctgtaatcaactaccaatgaaaattatttttacaccttcctataaaacttattttaaag 48291931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 34194915 - 34195028
Alignment:
Q  95 agtttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactat 193  Q
    |||||||||||  |||||||||||| |||| |||  ||||||||||||| ||||||||||||||||||||||||||||||  | ||| |||| |||||||    
T  34194915 agtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaacttatttcatgggtaagacaagaaactat 34195014  T
Q  194 gttacaaactacta 207  Q
    ||| ||||||||||    
T  34195015 gttgcaaactacta 34195028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 30454813 - 30454703
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  |||||||||||| |||| |||  |||||| |||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  30454813 tttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaactatgt 30454715  T
Q  196 tacaaactacta 207  Q
    | ||||||||||    
T  30454714 tgcaaactacta 30454703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 46918291 - 46918191
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    |||||||||||| |||| |||  ||||||||||||| |||||| ||||||||||||||||||||| || |||||||||| ||||||||||  ||||||||    
T  46918291 tttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaacttattttaaggataacacaagaaactatgttgtaaactact 46918192  T
Q  207 a 207  Q
    |    
T  46918191 a 46918191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 7886706 - 7886595
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  |||||||||||| ||||  ||  ||||||||||||| |||||||||||| |||||||| |||||||||  ||||||||| |||||||||    
T  7886706 tttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatttcaagaataacacaagaaactatgt 7886607  T
Q  196 tacaaactacta 207  Q
     |||||||||||    
T  7886606 cacaaactacta 7886595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 20847346 - 20847265
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||| |||||||||||||| |||  |||||||||||| ||||||||| |||||| ||||||||||    
T  20847346 tttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatgaaacttattccaaagaaaacacaaaaa 20847265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 16033042 - 16032987
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  16033042 accaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaa 16032987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 6438129 - 6438210
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||   |||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||    
T  6438129 tttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaagcttttttcaaagaaaacacaaaaa 6438210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 23910567 - 23910510
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  23910567 ccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaa 23910510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 30189641 - 30189698
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  30189641 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 30189698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 41476390 - 41476333
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  41476390 ccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaa 41476333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 23311647 - 23311585
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactat 193  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  23311647 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactat 23311585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 31126274 - 31126332
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | |||||||||||||||| || ||||||||||    
T  31126274 accaatgaaaattatttttacatctttccataaaacttatttcaaggagaacacaaaaa 31126332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 37075005 - 37075087
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| ||||||| |||   |||||||||||| | |||||||||||||||||||||| || |||||| ||||||||||    
T  37075005 ttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcctataaaactttttccaaagaaaacacaaaaa 37075087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 49583994 - 49584093
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaactatgtt 196  Q
    ||||||||  |||||||||||||| |||||| ||| |||||||| || |||||||||        |||||||||||||||||| ||||||||||||| ||    
T  49583994 tttgctctgtttttcattttctctgtaatcatctatcaatgaaagttgtttttacat--------aaaacttatttcaaagatgacacaaaaactatatt 49584085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 579192 - 579135
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||    
T  579192 ccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaacacaaaaa 579135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 2927359 - 2927416
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| || |||||||    
T  2927359 ccaatgaaaattatttttacatcttcccataaaacttattccaaagaaaatacaaaaa 2927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 9264621 - 9264678
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  9264621 ccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaa 9264678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 26725065 - 26724988
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||  ||||||||||||| |||||||||||||  | |||||||||| |||||| ||||||||||    
T  26725065 attttctccataatcaataaccaatgaaaattgtttttacatcttctcagaaaacttattccaaagaaaacacaaaaa 26724988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 37042495 - 37042414
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || ||||||||   |||||||||||| |||||||||||||||||||||||| || ||| || ||||||||||    
T  37042495 tttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttttccaacgaaaacacaaaaa 37042414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 46711712 - 46711655
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  46711712 ccaatgaatattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 46711655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 32619884 - 32619828
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| |||||||||    
T  32619884 ccaatgaaaattatttttacatcttcttataaaacctattccaaagaaaacacaaaa 32619828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 34022627 - 34022719
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||| |||| ||||||||||||||     |||||||| ||||||||||||||||| | |||||||||||||||| || ||||||||||    
T  34022627 tttgttctcctttttattttctctataatttttaaccaatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaa 34022719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 50651090 - 50651034
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  50651090 caatgaaaattgtttttacatcttcctataaaactttttgcaaagaaaacacaaaaa 50651034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 28875452 - 28875531
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa 187  Q
    |||||||||||| |||| |||   |||||||||||| ||||||||||||| |||||||||| || |||||| ||||||||    
T  28875452 tttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttccaaagaaaacacaaa 28875531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 37324142 - 37324083
Alignment:
Q  131 accaatgaaaattatttttacatcttcctat-aaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  37324142 accaatgagaattatttttacatctttccatgaaaacttatttcaaagataacacaaaaa 37324083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 23209358 - 23209260
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    ||||||||||||| |||  ||  |||||| |||||||||||| |||||| ||||||||||||||||||  ||||||| | ||||||| | |||||||||    
T  23209358 tttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttatttcaagaataacacgagaaactatatcacaaactac 23209260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 35963198 - 35963279
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||  |||||| |||||| ||||| |||||||||||||||||| || |||| | ||||||||||    
T  35963198 tttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttttccaaacaaaacacaaaaa 35963279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 47864262 - 47864307
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||    
T  47864262 caatgaaaattgtttttacatcttcctataaaacttttttcaaaga 47864307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 23513630 - 23513686
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||| ||||||||||||||||| | || |||||||||||||||| |||||||||    
T  23513630 ccaatgagaattatttttacatctttccatgaaacttatttcaaagagaacacaaaa 23513686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 53270306 - 53270362
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||| |||||| |||| |||||| ||||||||| ||||||||||    
T  53270306 caatgaaaattattttttcatctttctatgaaacttttttcaaagaaaacacaaaaa 53270362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 3972347 - 3972401
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| |||||||||||||| |||||||||| |||||||| ||||||||||    
T  3972347 aatgaaaattgtttttacatcttcccataaaactta-ttcaaagaaaacacaaaaa 3972401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 3997531 - 3997477
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| |||||||||||||| |||||||||| |||||||| ||||||||||    
T  3997531 aatgaaaattgtttttacatcttcccataaaactta-ttcaaagaaaacacaaaaa 3997477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 19464147 - 19464202
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| |||||  ||||||||||||||||| ||||||||| ||||||||||    
T  19464147 aatgaaaattgtttttcaatcttcctataaaacttttttcaaagaaaacacaaaaa 19464202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 21654310 - 21654365
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  21654310 aatgaaaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 21654365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 36150957 - 36151028
Alignment:
Q  101 ctctcattttcattttctctataatcaactaccaatgaaaattat-ttttacatcttcctataaaacttatt 171  Q
    |||| |||| ||||||||| ||||||||  |||||| |||||||| ||||||||||||| ||||||||||||    
T  36150957 ctcttatttccattttctccataatcaataaccaataaaaattatgttttacatcttcccataaaacttatt 36151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 11054366 - 11054308
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttattt-caaagataacacaaaaa 189  Q
    |||||||||||| |||||| ||||||||||||||||| ||| |||||| ||||||||||    
T  11054366 ccaatgaaaattgtttttaaatcttcctataaaacttttttccaaagaaaacacaaaaa 11054308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 54725665 - 54725627
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaactta 169  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  54725665 accaatgaaaattgtttttacatcttcctataaaactta 54725627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 55400800 - 55400858
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| |||||| ||||||||||    
T  55400800 accaatgagaattatttttacatctttccatgaaacttattccaaagagaacacaaaaa 55400858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 7866536 - 7866491
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||    
T  7866536 caatgaaaattgtttttacatcttcttataaaacttttttcaaaga 7866491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 36546588 - 36546669
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| ||||||| |||   ||||||||||||  |||||||||||||||| |||||| || |||||| || |||||||    
T  36546588 tttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaa 36546669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 36561727 - 36561646
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| ||||||| |||   ||||||||||||  |||||||||||||||| |||||| || |||||| || |||||||    
T  36561727 tttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaa 36561646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 14752261 - 14752205
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| ||||||||||||||||||||  || || |||||| ||||||||||    
T  14752261 caatgaaaattgtttttacatcttcctataaatttttttccaaagaaaacacaaaaa 14752205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 46557219 - 46557167
Alignment:
Q  137 gaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||| || |||||||||  ||||| ||||||||||    
T  46557219 gaaaattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaa 46557167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 17587782 - 17587845
Alignment:
Q  145 tttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactacta 207  Q
    |||||||||||||||||||||||||||||||  |||||| || ||||||| || |||| |||||    
T  17587782 tttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattacta 17587845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 1335172 - 1335230
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||| ||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  1335172 accaataaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 1335230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 28793224 - 28793282
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||| ||||| ||| |||||||||||||    
T  28793224 accaatgagaattatttttacatctttccatgaaatttattccaaggataacacaaaaa 28793282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 29235257 - 29235291
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaac 166  Q
    |||||||||||||||||||||||||||||| ||||    
T  29235257 ccaatgaaaattatttttacatcttcctattaaac 29235291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 45347771 - 45347713
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  45347771 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 45347713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 45781459 - 45781517
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || |||||||||  ||||| ||||||||||    
T  45781459 accaatgagaattatttttacatctttccatgaaacttattctaaagagaacacaaaaa 45781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 46296135 - 46296077
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  46296135 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 46296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 6075151 - 6075208
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||| ||||||| ||| |||| || |||||| ||||||||||    
T  6075151 ccaatgaaaattgtttttacttcttcctgtaacactttttccaaagaaaacacaaaaa 6075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 33973617 - 33973564
Alignment:
Q  136 tgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||| || |||| ||||||||||| ||| ||||| ||||||||||    
T  33973617 tgaaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaa 33973564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 34722659 - 34722622
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaactta 169  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  34722659 ccaatgaaaattgtttttacatcttcttataaaactta 34722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 31836990 - 31837046
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| ||||| ||| |||||||||||||| || |||||| || |||||||    
T  31836990 caatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaa 31837046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 50730191 - 50730235
Alignment:
Q  145 tttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||| || |||||| | ||||||||    
T  50730191 tttttacatcttcctataaaactttttccaaagaaagcacaaaaa 50730235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 50782663 - 50782619
Alignment:
Q  145 tttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||| || |||||| | ||||||||    
T  50782663 tttttacatcttcctataaaactttttccaaagaaagcacaaaaa 50782619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 30701515 - 30701404
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  30701515 tttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaaaaattatgt 30701416  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  30701415 tacaaactacta 30701404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 7397737 - 7397848
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  7397737 tttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgt 7397836  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  7397837 tacaaactacta 7397848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 25185434 - 25185322
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca--aaaactatg 194  Q
    |||| |||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  25185434 tttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatttcaaagataacacaaaaaaactatg 25185335  T
Q  195 ttacaaactacta 207  Q
    |||||||||||||    
T  25185334 ttacaaactacta 25185322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 50176563 - 50176664
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  50176563 ttttcattttctctataatcaactaccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactac 50176662  T
Q  206 ta 207  Q
    ||    
T  50176663 ta 50176664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 45840195 - 45840088
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||    
T  45840195 tttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatttcaaaaataacacaaaaaactatgt 45840097  T
Q  196 tacaaacta 204  Q
    |||||||||    
T  45840096 tacaaacta 45840088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 15912229 - 15912339
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    ||||||||| |||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  15912229 tttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatttcaaggataa-acaagaaactatgt 15912327  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  15912328 tacaaactacta 15912339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 44510349 - 44510238
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||| |||||||| |||||||||||| |||||||||| |||||||| ||||||||||    
T  44510349 tttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatttcaaaaataacacaaaaaactatgt 44510250  T
Q  196 tacaaactacta 207  Q
    || |||||||||    
T  44510249 tataaactacta 44510238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 16688178 - 16688278
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataaca-caaaaactatgttacaaactact 206  Q
    |||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  16688178 tttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaaaataacataaaaaactatgttacaaactact 16688277  T
Q  207 a 207  Q
    |    
T  16688278 a 16688278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 37538851 - 37538951
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    |||||||||||| |||| |||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  37538851 tttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactact 37538950  T
Q  207 a 207  Q
    |    
T  37538951 a 37538951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 16661557 - 16661658
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||| |||    
T  16661557 ttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaaatatgttacaaattac 16661655  T
Q  206 tac 208  Q
    |||    
T  16661656 tac 16661658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 5950470 - 5950579
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  ||||||||| || |||| |||  ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  5950470 tttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaagaaactatgt 5950569  T
Q  196 tacaaactac 205  Q
    | ||||||||    
T  5950570 tgcaaactac 5950579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 13351711 - 13351782
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaactt 168  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13351711 tttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaactt 13351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 5858501 - 5858391
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  |||||||||||| |||| |||   |||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  5858501 tttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatttcaaggataacacaagaaactatgt 5858402  T
Q  196 tacaaactact 206  Q
    | |||||||||    
T  5858401 tgcaaactact 5858391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 8889793 - 8889717
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  8889793 accaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaataaactatattacaaactact 8889717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 2246109 - 2246052
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  2246109 ccaatgaaaattctttttacatattcctataaaacttatttcaaagaaaacacaaaaa 2246052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 3076330 - 3076431
Alignment:
Q  101 ctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttaca 199  Q
    |||||| ||| ||||| || |||| ||| | ||||||||||||||||||||||||||| |||||||||||| |||| | ||||| |||||||||| ||||    
T  3076330 ctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccataaaacttattccaaataaaacacaaaaaactatgctaca 3076429  T
Q  200 aa 201  Q
    ||    
T  3076430 aa 3076431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 12449062 - 12449005
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  12449062 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 12449005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 15959735 - 15959678
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  15959735 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 15959678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 32624100 - 32624043
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  32624100 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 32624043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 35366299 - 35366222
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactacta 207  Q
    |||||| |||||| |||||||||||| |||||||| ||||||||| |||||||||| |||||||||| ||||||||||    
T  35366299 accaattaaaattgtttttacatctttctataaaatttatttcaacgataacacaagaaactatgttgcaaactacta 35366222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 39555681 - 39555623
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaac 190  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||| |||||||||||    
T  39555681 ccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaac 39555623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 41063806 - 41063884
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaa-cttatttcaaagataacac-aaaaactatgttacaaactacta 207  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||  ||||||| |||||||||||| ||||||||||    
T  41063806 accaatgaaaattatttttacatctttctataaaagcttattttaagaataacacaaaaaactatgttgcaaactacta 41063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 2126104 - 2126161
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  2126104 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 2126161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 43667398 - 43667341
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||    
T  43667398 ccaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaa 43667341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 10558872 - 10558796
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa 187  Q
    ||||||||| ||||||||   |||||||||||| |||||||||||||| |||||| ||||| |||||| ||||||||    
T  10558872 cattttctccataatcaatagccaatgaaaattgtttttacatcttcccataaaaattattccaaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 13352180 - 13352236
Alignment:
Q  152 atcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactacta 207  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  13352180 atcttcctataaaacttatttcaaagataacacaaaaaattatgtaacaaactacta 13352236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 46818634 - 46818540
Alignment:
Q  95 agtttgctctcattttcattttctctataatcaacta-ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||| |||||||||||| |||| | | || |||||||||||| |||||| ||||||||||||||||| ||||||||| || |||||||    
T  46818634 agttttctctcaatttcattttctccataa-ctattagccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaatacaaaaa 46818540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 28016841 - 28016779
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataaca-caaaaactat 193  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||| |||| ||||||||||    
T  28016841 ccaatgaaaattgtttttacatcttcctataaaacatttttcaaagaaaacaccaaaaactat 28016779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 32318677 - 32318615
Alignment:
Q  110 tcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttattt 172  Q
    |||||||||| |||| |||  ||||||||||||| |||||||||||||| |||||||||||||    
T  32318677 tcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttattt 32318615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 33431601 - 33431695
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    ||||||||||||||||| |||   |||||||||||| ||||| |||| ||||||||||||| ||| ||| | ||||| |||||||||| ||||||    
T  33431601 tttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctataaaacttttttaaaaaaaaacacaaaaaactatgctacaaa 33431695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 35884272 - 35884330
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | |||||| |||||||||| | ||||||||||    
T  35884272 accaatgaaaattatttttacatctttccataaaatttatttcaaaaagaacacaaaaa 35884330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 43656136 - 43656078
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  43656136 accaatgaaaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 43656078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 43765359 - 43765417
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| | |||||||||||||||||||||||||||  ||||| ||||||||||    
T  43765359 accaatgaaaaatgtttttacatcttcctataaaacttattctaaagaaaacacaaaaa 43765417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 44148931 - 44148861
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||| ||||| |||||||||| ||||||    
T  44148931 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 44148861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 46803760 - 46803690
Alignment:
Q  138 aaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgttacaaactacta 207  Q
    |||||| |||||||||||| |||| ||||||||| ||| ||||||||| ||||||||||| ||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactatgttgcaaactacta 46803690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 51339012 - 51338938
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    |||||||||||||  ||  |||||||||||||  ||||||||||| |||| |||||||||||||||| |||||||    
T  51339012 attttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatttcaaagacaacacaa 51338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 11241093 - 11241150
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||  ||||||||||||||||||||||| || |||||| ||||||||||    
T  11241093 ccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaa 11241150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 24728742 - 24728665
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| || |||||||| | |||||||||||| |||||||||||||| || |||||||||  ||||| ||||||||||    
T  24728742 attttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttattcgaaagaaaacacaaaaa 24728665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 35691459 - 35691516
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||| ||||||||||| |||||||||||| ||||||||| ||||||||||    
T  35691459 ccaataaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaa 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 47014585 - 47014529
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| ||||||||| |||||||||||||| |||||| || ||||||||||    
T  47014585 caatgaaaattgtttttacattttcctataaaacttttttcaacgaaaacacaaaaa 47014529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 18852284 - 18852342
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  18852284 accaatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 18852342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 23873926 - 23873868
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  23873926 accaatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 23873868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 38942540 - 38942482
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  38942540 accaatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 38942482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 46949382 - 46949440
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  46949382 accaatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 46949440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 51840610 - 51840536
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    |||||||||||||  ||  |||||||||||||  ||||| ||||| |||| ||||||||| ||||||||||||||    
T  51840610 attttctctataactaataaccaatgaaaattgattttatatctttctatgaaacttattccaaagataacacaa 51840536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 6785522 - 6785579
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||| |||||||||| ||  ||||| ||||||||||    
T  6785522 ccaatgaaaattgtttttacatcttcatataaaactttttcaaaagaaaacacaaaaa 6785579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 6786904 - 6786961
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| | ||||||||||| |||||||||| || |||||| ||||||||||    
T  6786904 ccaatgaaaattgtgtttacatcttcatataaaactttttccaaagaaaacacaaaaa 6786961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 7468058 - 7468001
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| | ||||||||||||| |||||||| || |||||| ||||||||||    
T  7468058 ccaatgaaaattgtatttacatcttcctttaaaactttttccaaagaaaacacaaaaa 7468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 24190535 - 24190592
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||| | |||||||||| || |||||| ||||||||||    
T  24190535 ccaatgaaaattgtttttacatctccgtataaaactttttccaaagaaaacacaaaaa 24190592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 28120874 - 28120793
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || ||||||||   |||||||||||| |||||||||||||| |||||| | |||| ||| | ||||||||||    
T  28120874 tttcattttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaa 28120793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 30221791 - 30221848
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||| | |||||||||||||| ||||||||||||| ||||| ||||||||||    
T  30221791 ccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaa 30221848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 32983266 - 32983210
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||| |||||||||| || |||||| ||||||||||    
T  32983266 ccaatgaaaattgtttttacatcttcttataaaactt-ttccaaagaaaacacaaaaa 32983210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 40718744 - 40718801
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||| |||| |||| |||||||||| ||||||||| ||||||||||    
T  40718744 ccaatgaaaattgtttctacaacttcatataaaacttttttcaaagaaaacacaaaaa 40718801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 42965910 - 42965854
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||||||||||| || || |||||| ||||||||||    
T  42965910 ccaatgaaaattgtttttacatcttcctataaaa-tttttccaaagaaaacacaaaaa 42965854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 45226205 - 45226250
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||    
T  45226205 caatgaaaattgtttttacgtcttcctataaaacttttttcaaaga 45226250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 47303025 - 47302945
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||||||  ||||||||   ||||||||||||||||| |||||||||||| ||||||||| | || | |||||||||    
T  47303025 ttttcattttctacataatcaatagccaatgaaaattatttt-acatcttcctatgaaacttattcctaaaaaaacacaaaa 47302945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 52841564 - 52841467
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaacta 204  Q
    |||||||||| ||||||  ||  ||||||||||||| |||| ||||||| |||| |||||||||| || ||||| |||| |||||||  |||||||||    
T  52841564 tttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattttaaggataagacaagaaactatactacaaacta 52841467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 52984999 - 52985056
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||||  | ||||||||| |||||| ||||||||||    
T  52984999 ccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaa 52985056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 35941904 - 35941960
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||| ||||||||| | |||||||||||||||| || | ||||||||    
T  35941904 caatgaaaattattattacatctttccataaaacttatttcaaggagagcacaaaaa 35941960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 39151242 - 39151194
Alignment:
Q  159 tataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  39151242 tataaaacttatttcaaggataacacaagaaactatgttgcaaactact 39151194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 47600134 - 47600098
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaactt 168  Q
    |||||||||||| ||||||||||||||||||||||||    
T  47600134 ccaatgaaaattgtttttacatcttcctataaaactt 47600098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 6787085 - 6787050
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaact 167  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6787085 ccaataaaaattatttttacatcttcctataaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 9128104 - 9128162
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||| ||||||||| || ||||||||||    
T  9128104 accaatgagaattatttttacatctttccattaaatttatttcaaggagaacacaaaaa 9128162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 15285864 - 15285922
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| |||||||||||||| || | || ||||||||||||| || ||||||||||    
T  15285864 accaatgagaattatttttacatatttccatgaaacttatttcaaggagaacacaaaaa 15285922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 25990809 - 25990867
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||| || | || ||||||||| ||| || ||||||||||    
T  25990809 accaatgaaaattatttttacatatttccatgaaacttattccaaggagaacacaaaaa 25990867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 26479800 - 26479858
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| |||||||||||||| || | ||||||||||||| || || ||||||||||    
T  26479800 accaatgagaattatttttacatttttccataaaacttattttaaggagaacacaaaaa 26479858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 28916614 - 28916556
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||| |||  | ||||||||||    
T  28916614 accaatgaaaattatttttacatctttccatgaaacttattccaagaagaacacaaaaa 28916556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 31970408 - 31970350
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  31970408 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 31970350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 40220117 - 40220175
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  40220117 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 40220175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 40935712 - 40935654
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  40935712 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 40935654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 40960573 - 40960515
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  40960573 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 40960515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 49924480 - 49924538
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || |||||||||||||  | ||||||||||    
T  49924480 accaatgagaattatttttacatctttccatgaaacttatttcaagaagaacacaaaaa 49924538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 1034926 - 1034979
Alignment:
Q  135 atgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||| |||||| ||||||  |||||||||||| |||||| |||||||||    
T  1034926 atgaaaattgtttttatatcttctcataaaacttattccaaagaaaacacaaaa 1034979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 3861790 - 3861733
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||| | ||||||||||||  ||||| |||| |||||    
T  3861790 ccaatgaaaattgtttttacatctttcaataaaacttattctaaagaaaacataaaaa 3861733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 23392260 - 23392215
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    |||||||||||||||||| || || |||||||||||||| ||||||    
T  23392260 caatgaaaattatttttatatttttctataaaacttattccaaaga 23392215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 25391748 - 25391804
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||| ||| |||||||||||| | ||||| ||||||||||    
T  25391748 ccaatgaaaattgtttttacattttcatataaaacttatct-aaagaaaacacaaaaa 25391804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 33369617 - 33369673
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||| || |||||||||| || |||||| ||||||||||    
T  33369617 ccaatgaaaattgtttttacatc-tcatataaaactttttccaaagaaaacacaaaaa 33369673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 46543048 - 46543105
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||| ||||| ||||| ||||||||||||||  || ||||||||| ||||||||||    
T  46543048 ccaatggaaattgttttttcatcttcctataaattttttttcaaagaaaacacaaaaa 46543105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 50370034 - 50370071
Alignment:
Q  139 aaattatttttacatcttcctataaaacttatttcaaa 176  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  50370034 aaattgtttttacatcttcctataaaacttttttcaaa 50370071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 16854182 - 16854250
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaa 176  Q
    |||||||||||| |||| |||   ||||| |||||| |||||||| ||||| ||||||||| |||||||    
T  16854182 tttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaaacttttttcaaa 16854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 28017719 - 28017763
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaa 175  Q
    |||||||| ||||||||||||||||| | || |||||||||||||    
T  28017719 accaatgataattatttttacatctttccatgaaacttatttcaa 28017763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 35189262 - 35189306
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaa 175  Q
    ||||||||||||||||||||||| || | || |||||||||||||    
T  35189262 accaatgaaaattatttttacatatttccatgaaacttatttcaa 35189306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 3463945 - 3463839
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaactatgtt 196  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3463945 tttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatttcaaagataacacaaaaactatgtt 3463846  T
Q  197 acaaact 203  Q
    |||||||    
T  3463845 acaaact 3463839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 8959671 - 8959783
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||  |    
T  8959671 tttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactaaat 8959770  T
Q  196 tacaaactactac 208  Q
    |||||||||||||    
T  8959771 tacaaactactac 8959783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 16153475 - 16153368
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16153475 tttgctctctttttcactttctctataatcaactaccaatgaaaatg-tttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgt 16153377  T
Q  196 tacaaacta 204  Q
    |||||||||    
T  16153376 tacaaacta 16153368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 1144611 - 1144510
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgttacaaactac 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  1144611 ttttcattttctctataatcaactaccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactatgttacaaactac 1144512  T
Q  206 ta 207  Q
    ||    
T  1144511 ta 1144510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 29307307 - 29307206
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||    
T  29307307 tttttattttctctacaatcaactaccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaactacgttacaaactac 29307208  T
Q  206 ta 207  Q
    ||    
T  29307207 ta 29307206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 5736370 - 5736259
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataaca-caaaaactatgt 195  Q
    |||||||||  ||||||||||||| |||||||| || |||||||||| |||||||| |||||||||||| |||||||||||||||||  |||||||||||    
T  5736370 tttgctctccctttcattttctctgtaatcaacgacaaatgaaaattgtttttacaacttcctataaaatttatttcaaagataacataaaaaactatgt 5736271  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  5736270 tacaaactacta 5736259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 5369150 - 5369053
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgttacaaacta 204  Q
    |||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  5369150 tttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttattttaaaaataacacaaaaaactatgttacaaacta 5369053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 28907110 - 28907211
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||| |||    
T  28907110 ttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaaatatgttacaaattac 28907208  T
Q  206 tac 208  Q
    |||    
T  28907209 tac 28907211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 28943505 - 28943606
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||| |||    
T  28943505 ttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaaatatgttacaaattac 28943603  T
Q  206 tac 208  Q
    |||    
T  28943604 tac 28943606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 12912424 - 12912332
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||  ||||||||| || | || |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12912424 tttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 12912332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 30703643 - 30703724
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||  ||||||||  |||||||||| || ||| ||||||||||||||||| |||||||||||||||||||||||    
T  30703643 tttcattttctgaataatcaataaccaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaa 30703724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 8506497 - 8506573
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactacta 207  Q
    |||||||||||| |||||||||||| |||||||||||||||||| ||||||| || |||||||||| ||||||||||    
T  8506497 ccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacataagaaactatgttgcaaactacta 8506573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 19413207 - 19413277
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||    
T  19413207 ccaatgaaaattgtttttacatcttcccataaaacttatttcaaagaaaacacaaaaaactatgctacaaa 19413277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 32432319 - 32432393
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||||| || ||||||||||| ||||||||    
T  32432319 caatgaaaattatttttacatctttatataaaacttatttcaaggataacataagaaactatgttataaactact 32432393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 11261979 - 11261922
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  11261979 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 11261922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 5659640 - 5659584
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataa 163  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  5659640 ttttcattttttctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 38280889 - 38280969
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||| || ||||||||  ||||||||||||| ||||||||| |||||||||||||| ||||||||| | |||||||    
T  38280889 tttcattttttccataatcaataaccaatgaaaattgtttttacattttcctataaaacttttttcaaagaaagcacaaaa 38280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 41625604 - 41625549
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  41625604 aatgaaaataatttttacatcttcctatgaaacttatttcaaagaaaacacaaaaa 41625549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 20644080 - 20644137
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  20644080 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 20644137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 34425396 - 34425453
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||    
T  34425396 ccaatgaaaattgtttttacatattcctataaaacttttttcaaagaaaacacaaaaa 34425453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 42273689 - 42273770
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||   |||||||||||| ||||||||||||| |||||||||| || |||||| ||||||||||    
T  42273689 tttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttccaaagaaaacacaaaaa 42273770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 32111069 - 32111124
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||    
T  32111069 caatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacacaaaa 32111124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 6686450 - 6686508
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttattt-caaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||    
T  6686450 ccaatgaaaattgtttttacatcttcctataaaacttttttccaaagaaaacacaaaaa 6686508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 10154047 - 10153985
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttat 170  Q
    |||||||||||| || | |||  ||||||||||||| ||||||||||||||||||||||||||    
T  10154047 tttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaacttat 10153985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 13146792 - 13146850
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | |||||||||||| |||||| ||||||||||    
T  13146792 accaatgagaattatttttacatctttccataaaacttattccaaagagaacacaaaaa 13146850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 6391911 - 6391992
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||  ||  |||||| ||| || |||||||||||| |||| ||||||||||||||||| | |||||||    
T  6391911 tttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttatttcaaagatgatacaaaaa 6391992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 18718644 - 18718721
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactacta 207  Q
    |||||| ||||||  ||||||||||  |||||||||||||||||| |||||||||| ||||||| ||| |||||||||    
T  18718644 accaattaaaattgcttttacatctatctataaaacttatttcaaggataacacaataaactatattataaactacta 18718721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 25840931 - 25841000
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    ||||||||||| |||||||||||||| || ||||||||| |||||| ||||| |||||||||| ||||||    
T  25840931 caatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 25841000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 37522684 - 37522627
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || |||| | ||||||||||    
T  37522684 ccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaa 37522627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 38130211 - 38130154
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||| |||||||||||||| ||  ||||| ||||||||||    
T  38130211 ccaatgaaaattatttttacatattcctataaaactttttctaaagaaaacacaaaaa 38130154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 39505328 - 39505271
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||| | |||||||||||| |||||| ||||||||||    
T  39505328 ccaatgaaaattgtttttacatcttaccataaaacttattccaaagaaaacacaaaaa 39505271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 5984202 - 5984146
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| ||||||||| || |||||||||||||| |||||| ||||||||||    
T  5984202 caatgaaaattgtttttacatatttctataaaacttattccaaagaaaacacaaaaa 5984146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 43454416 - 43454361
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| ||||||||| ||||||||||||||||  |||||| ||||||||||    
T  43454416 aatgaaaattgtttttacatattcctataaaacttatgacaaagaaaacacaaaaa 43454361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 31690716 - 31690658
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||  | ||||||||||    
T  31690716 accaatgaaaattatttttacatctttctataaaactcattccaagaagaacacaaaaa 31690658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 20039168 - 20039225
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| ||||||  ||||||||||||||||||||| | ||||||||| ||||||||||    
T  20039168 ccaataaaaattggttttacatcttcctataaaacctttttcaaagaaaacacaaaaa 20039225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 42104364 - 42104287
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||| ||||| ||   |||||||||||| |||||||||||||| || |||||| || |||||| |||||||||    
T  42104364 cattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaacttgttccaaagagaacacaaaa 42104287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 43590057 - 43590000
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||| |||||||||||| ||  ||||| ||||||||||    
T  43590057 ccaatgaaaattgtttttacatctccctataaaactttttcaaaagaaaacacaaaaa 43590000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 8146106 - 8146051
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| ||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  8146106 aatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 8146051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 104307 - 104265
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaa 176  Q
    |||||||||| |||||||||||| ||||||||||| |||||||    
T  104307 aatgaaaattgtttttacatctttctataaaacttttttcaaa 104265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 12638952 - 12639010
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | |||||| ||||| ||| || ||||||||||    
T  12638952 accaatgagaattatttttacatctttccataaaatttattccaaggagaacacaaaaa 12639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 16286179 - 16286121
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| |||||||||||||||||   || ||||||||| |||||| ||||||||||    
T  16286179 accaatgagaattatttttacatcttttcatgaaacttattccaaagagaacacaaaaa 16286121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 20914922 - 20914980
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  20914922 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 20914980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 24432496 - 24432438
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  24432496 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 24432438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 25962544 - 25962486
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  25962544 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 25962486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 31316897 - 31316839
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  31316897 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 31316839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 37562855 - 37562821
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaactt 168  Q
    |||||||||| ||||||||||||||||||||||||    
T  37562855 aatgaaaattgtttttacatcttcctataaaactt 37562821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 17351432 - 17351493
Alignment:
Q  110 tcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 171  Q
    |||||||||| ||||||||   ||||| |||||| |||||||||||| | ||||||||||||    
T  17351432 tcattttctccataatcaatagccaattaaaattgtttttacatctttccataaaacttatt 17351493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 32017770 - 32017803
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaac 166  Q
    ||||||||||| ||||||||||||||||||||||    
T  32017770 caatgaaaattgtttttacatcttcctataaaac 32017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 3209 - 3310
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaactac 205  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3209 ttttcattttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactac 3308  T
Q  206 ta 207  Q
    ||    
T  3309 ta 3310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 28142745 - 28142637
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  28142745 tttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttattttaaagataacacaaaaaattatgt 28142646  T
Q  196 tacaaacta 204  Q
    |||||||||    
T  28142645 tacaaacta 28142637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 46070634 - 46070535
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaactatgttacaaactacta 207  Q
    |||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46070634 tttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagacaacacaaaaactatgttacaaactacta 46070535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 32410357 - 32410449
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32410357 tttgctctcttttttattttctctataattaactagcaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 32410449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 5064774 - 5064667
Alignment:
Q  101 ctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgttaca 199  Q
    ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  5064774 ctctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatttcaaagataacacaaaaaattatgttaca 5064675  T
Q  200 aactacta 207  Q
    || |||||    
T  5064674 aattacta 5064667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 204
Target Start/End: Complemental strand, 28318530 - 28318434
Alignment:
Q  107 ttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaacta 204  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  28318530 ttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa--ttatttcaaagataacacaaaaaactatgttacaaacta 28318434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 37911913 - 37912023
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||| ||||||||||| |||||||||||    
T  37911913 tttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttattttaaagataacacaaaaaactatgt 37912012  T
Q  196 tacaaactact 206  Q
    || ||||||||    
T  37912013 tataaactact 37912023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 47516314 - 47516203
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    |||||||||  |||||||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| |    
T  47516314 tttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatttcaaagataacacaaaaaactatat 47516215  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  47516214 tacaaactacta 47516203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 29511456 - 29511559
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    ||||||||| |||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  29511456 tttgctctctttttcattttctctgtaatcaact--caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactatgt 29511553  T
Q  196 tacaaa 201  Q
    ||||||    
T  29511554 tacaaa 29511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 49080286 - 49080392
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    |||| |||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  49080286 tttgatctctttttcattttccctgtaatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataagacaaaaaattatgt 49080385  T
Q  196 tacaaac 202  Q
    |||||||    
T  49080386 tacaaac 49080392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 5841902 - 5841791
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgt 195  Q
    |||||||||  ||||||||| || |||| |||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  5841902 tttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatttcaaggataacacaagaaactatgt 5841803  T
Q  196 tacaaactacta 207  Q
    | ||||||||||    
T  5841802 tgcaaactacta 5841791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 23978238 - 23978169
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaac 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23978238 tttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 8178362 - 8178251
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    |||||||||  |||||||||||| |||| |||  ||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  8178362 tttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatttcaaagataacacatgaaactatgt 8178263  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  8178262 tacaaactacta 8178251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 8013201 - 8013101
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    ||||||||||||||| |  ||  |||||| |||||| |||||||||||| |||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  8013201 tttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaactatgttacaaactact 8013102  T
Q  207 a 207  Q
    |    
T  8013101 a 8013101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 4058755 - 4058836
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || |||| |||  ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  4058755 tttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 4058836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 40411130 - 40411199
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaac 166  Q
    |||| |||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  40411130 tttgatctctttttcattttctctgtaatcaactaccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 53848523 - 53848600
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactacta 207  Q
    |||||| |||||| ||||||| ||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||    
T  53848523 accaattaaaattgtttttacgtcttcctataaaaattatttcaaggataacacaagaaactatgttgcaaactacta 53848600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 21722769 - 21722714
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  21722769 caatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaa 21722714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 5483366 - 5483309
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  5483366 ccaatgaaaattgtttttacatcttcctattaaacttattttaaagaaaacacaaaaa 5483309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 7654657 - 7654738
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || ||||||||   |||||||||||| |||||| ||||||||||||||||| || |||||| ||||||||||    
T  7654657 tttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaacacaaaaa 7654738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 16604934 - 16604877
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||    
T  16604934 ccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaacacaaaaa 16604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 17794629 - 17794572
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||    
T  17794629 ccaatgaaaattgtttttacatcttcctataaaatttatttcaaagaaaacgcaaaaa 17794572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 20281655 - 20281712
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  20281655 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 20281712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26916389 - 26916446
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  26916389 ccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 26916446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 41414699 - 41414642
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  41414699 ccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 41414642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 47867943 - 47868000
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  47867943 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 47868000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 5815534 - 5815590
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  5815534 caataaaaattatttttacatcttctcataaaacttatttcaaagaaaacacaaaaa 5815590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 32323371 - 32323293
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| ||||||||    ||||||||||| |||||||||||||| ||||| ||||||| ||||| ||||||||||    
T  32323371 cattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccataaatcttattttaaagaaaacacaaaaa 32323293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 2229311 - 2229368
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  2229311 ccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 2229368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 14332824 - 14332881
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  14332824 ccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 14332881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 24940405 - 24940486
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||  ||||| ||||||| ||||||||||||| |||||||||| || |||||| || |||||||    
T  24940405 tttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaactttttccaaagaaaatacaaaaa 24940486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 48793716 - 48793648
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||| ||||| ||||||||| ||||||    
T  48793716 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacac-aaaactatgctacaaa 48793648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 32203276 - 32203323
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  32203276 accaatgaaaattgtttttatatcttcccataaaacttatttcaaaga 32203323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 56318156 - 56318101
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||| |||||||||||||||||||| ||| || |||||| ||||||||||    
T  56318156 aatgaaaattgtttttacatcttcctataaacctttttccaaagaaaacacaaaaa 56318101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 8683394 - 8683324
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||||||||||||| || | || ||||||||| |||||| ||||| |||||||||| ||||||    
T  8683394 ccaatgaaaattatttttacatatttccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 8683324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 29180474 - 29180416
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| |||| ||||||||| ||| || ||||||||||    
T  29180474 accaatgagaattatttttacatctttctatgaaacttattccaaggagaacacaaaaa 29180416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 29899773 - 29899831
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||| || ||||||||||    
T  29899773 accaatgagaattatttttacatctttccataaaacttattccaaggagaacacaaaaa 29899831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 30777545 - 30777603
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || ||||||||||    
T  30777545 accaatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaa 30777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 42915594 - 42915664
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||| | || ||||||||| |||||| ||||| |||||||||| ||||||    
T  42915594 ccaatgaaaattgtttttacatctttccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 42915664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 50768503 - 50768561
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  50768503 accaatgaaaattatttttacatctttccatgaaacttattccaaggaaaacacaaaaa 50768561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 1585456 - 1585379
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    ||||||||| ||||||||   ||||| |||||| |||| ||||||| | || |||||||||||||||| |||||||||    
T  1585456 cattttctccataatcaatagccaataaaaattgttttaacatctttccatgaaacttatttcaaagaaaacacaaaa 1585379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 10069761 - 10069818
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| || |||||||    
T  10069761 ccaatgaaaattgtttttacatctttctataaaacttttttcgaagaaaatacaaaaa 10069818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 16473828 - 16473869
Alignment:
Q  148 ttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||| ||||||||| ||||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaa 16473869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 39078221 - 39078277
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||| ||||||||||| || |||||| ||||||||||    
T  39078221 ccaatgaaaattgtttttacatctt-ctataaaactttttccaaagaaaacacaaaaa 39078277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 55580734 - 55580791
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||| ||||| || |||||| |||| |||||    
T  55580734 ccaatgaaaattgtttttacatcttcctatacaactttttccaaagaaaacaaaaaaa 55580791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 36542894 - 36542946
Alignment:
Q  156 tcctataaaacttatttcaaagataacac-aaaaactatgttacaaactacta 207  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||||||||||    
T  36542894 tcctataaaacttatttcaaggataacacaaaaaactttgttgcaaactacta 36542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 50145779 - 50145854
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaa 187  Q
    ||||||||| || |||||   |||||||||||| | |||||||||||| |||||||||||| |||||| ||||||||    
T  50145779 cattttctccattatcaatagccaatgaaaattgtgtttacatcttcccataaaacttattccaaaga-aacacaaa 50145854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 55937765 - 55937705
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaact 191  Q
    |||||||| |||||||||||||| || | || ||||||||||||| || ||||||||||||    
T  55937765 accaatgagaattatttttacatttttccatgaaacttatttcaaggagaacacaaaaact 55937705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 3043229 - 3043171
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| ||  |||||||||    
T  3043229 accaatgagaattatttttacatctttccatgaaacttatttcaaggagtacacaaaaa 3043171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 10591565 - 10591507
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  10591565 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 10591507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 28669090 - 28669032
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||| ||||||||| |||||||||||| | ||  ||||| ||||||||||    
T  28669090 accaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaa 28669032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 30012016 - 30011958
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| |||| |||||||||||| | || ||||||||| |||| ||||||||||||    
T  30012016 accaatgataattgtttttacatctttccatgaaacttattccaaaaataacacaaaaa 30011958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 30776546 - 30776488
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  30776546 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 30776488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 35310830 - 35310760
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||| | || |||||||||  ||||| ||||| |||||||||| ||||||    
T  35310830 ccaatgaaaattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatgctacaaa 35310760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 37788509 - 37788567
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  37788509 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 37788567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 39970051 - 39969993
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  39970051 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 39969993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 43980556 - 43980614
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| |||||||||||||||||   || ||||||||||||| || ||||||||||    
T  43980556 accaatgagaattatttttacatcttttcatgaaacttatttcaaggagaacacaaaaa 43980614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 47807253 - 47807311
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| || ||||||||||||||||| | || ||||||||| |||||| ||||||||||    
T  47807253 accaacgagaattatttttacatctttccatgaaacttattccaaagagaacacaaaaa 47807311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 53677541 - 53677483
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| |||| ||||| ||| ||| || ||||||||||    
T  53677541 accaatgagaattatttttacatctttctatgaaactcattccaaggagaacacaaaaa 53677483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 8018420 - 8018501
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| | ||||| |||  | ||||||||||||||||||||||||  ||| |||||||||  || |||||| ||||||    
T  8018420 tttcattttatttataaccaataatcaatgaaaattatttttacatctttatatgaaacttattctaaggataacgcaaaaa 8018501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 17186883 - 17186850
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaa 165  Q
    ||||||||| ||||||||||||||||||||||||    
T  17186883 ccaatgaaacttatttttacatcttcctataaaa 17186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 17799244 - 17799187
Alignment:
Q  110 tcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaact 167  Q
    |||||||||| ||||  ||  ||||||||||||| |||||||||||||| ||||||||    
T  17799244 tcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaact 17799187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 25268523 - 25268600
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| |||| |||  ||||||||||||||||||||  ||||| | | |||||||||||||  | ||||||||||    
T  25268523 attttctccataaccaataaccaatgaaaattatttttatttcttcttgtgaaacttatttcaagtagaacacaaaaa 25268600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 29203570 - 29203603
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaa 165  Q
    |||||||||||| |||||||||||||||||||||    
T  29203570 ccaatgaaaattgtttttacatcttcctataaaa 29203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 40553802 - 40553887
Alignment:
Q  101 ctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa 186  Q
    ||||| |||||| |||||| ||||  ||  |||||||||| || |||||||||||| |||| |||||||||  || ||||||||||    
T  40553802 ctctccttttcactttctccataactaataaccaatgaaacttgtttttacatctttctatgaaacttattctaaggataacacaa 40553887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 9798135 - 9798079
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||| ||||||||||||||||| | || ||||||||||||| || ||| ||||||    
T  9798135 caatgagaattatttttacatctttccatgaaacttatttcaaggagaacgcaaaaa 9798079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 20716244 - 20716280
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaactt 168  Q
    |||||||||||| |||||||||||| |||||||||||    
T  20716244 ccaatgaaaattgtttttacatctttctataaaactt 20716280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 25297330 - 25297266
Alignment:
Q  112 attttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaa 176  Q
    |||||||| ||||||||   |||||||||||| |||||||||||| | || ||||||||| ||||    
T  25297330 attttctccataatcaatagccaatgaaaattgtttttacatctttccatgaaacttattacaaa 25297266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 35888098 - 35887987
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgt 195  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  35888098 tttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatttcaaagataacacaaaaaattatgt 35887999  T
Q  196 tacaaactacta 207  Q
    ||||||||||||    
T  35887998 tacaaactacta 35887987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 31769091 - 31768999
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  31769091 tttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatttcaaagatgacacaaaaa 31768999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 39170576 - 39170676
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    |||||||||||| ||||||||  || |||||||||| ||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  39170576 tttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatttcaaggataacacaataaactatgttacaaactact 39170675  T
Q  207 a 207  Q
    |    
T  39170676 a 39170676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 38260347 - 38260456
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgt 195  Q
    |||||||||  |||||||||||| ||||| ||  |||||||||||||||||||||| ||| ||||||||||||||||||  ||||||| ||||||||| |    
T  38260347 tttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatttcaagaataacacaaaaaactatat 38260446  T
Q  196 tacaaactac 205  Q
    ||||||||||    
T  38260447 tacaaactac 38260456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 10248593 - 10248671
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca--aaaactatgttacaaactacta 207  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  10248593 accaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactatgttacaaactacta 10248671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 4910751 - 4910670
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||    
T  4910751 tttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataaaactttttctaaagaaaacacaaaaa 4910670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 6191087 - 6191168
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||| |||   |||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||||    
T  6191087 tttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttaaaagaaaacacaaaaa 6191168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 18102596 - 18102653
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  18102596 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 18102653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 45486021 - 45486078
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  45486021 ccaatgaaaattatttttacatcttcctataaaactttttccaaagaaaacacaaaaa 45486078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 46760351 - 46760294
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  46760351 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 46760294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 3778020 - 3778120
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    |||||||||||| |||| |||  | |||||||||||||||||| || |||||  |||| ||||||||| |||||||||| |||||||||| |||||||||    
T  3778020 tttcattttctcaataaccaatgatcaatgaaaattatttttatattttcctggaaaaattatttcaaggataacacaataaactatgttgcaaactact 3778119  T
Q  207 a 207  Q
    |    
T  3778120 a 3778120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 22632155 - 22632227
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa-ctatgttacaaact 203  Q
    |||||||||||| |||||||||||||| || |||||||||||||||| |||||||||| ||||| ||||||||    
T  22632155 ccaatgaaaattgtttttacatcttcccatgaaacttatttcaaagaaaacacaaaaatctatgctacaaact 22632227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 25944642 - 25944701
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaact 191  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||||    
T  25944642 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaact 25944701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 40560442 - 40560500
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  40560442 accaatgagaattatttttacatctttctataaaacttatttcaaggagaacacaaaaa 40560500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 35923318 - 35923379
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaactat 193  Q
    |||||||||||| |||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  35923318 ccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacacaaaaactat 35923379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 35068962 - 35068886
Alignment:
Q  113 ttttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||   | ||| |||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  35068962 ttttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 35068886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 3157496 - 3157554
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || |||||||||||||||| ||||||||||    
T  3157496 accaatgagaattatttttacatctttccatgaaacttatttcaaagagaacacaaaaa 3157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 25737721 - 25737659
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactat 193  Q
    |||||||||||| |||||||||||||||||||||||| || |||||| |||||| ||||||||    
T  25737721 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacacaaaactat 25737659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 12632438 - 12632381
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||| |||| |||||    
T  12632438 ccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaa 12632381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 14805936 - 14805992
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| || |||||||    
T  14805936 ccaatgaaaattgtttttacatcttcctataaaactt-tttcaaagaaaatacaaaaa 14805992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 15252930 - 15252986
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| || |||||||    
T  15252930 ccaatgaaaattgtttttacatcttcctataaaactt-tttcaaagaaaatacaaaaa 15252986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 19912887 - 19912806
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| || |||| |||  ||||||||||||| ||||||||| || ||||||||||| || |||||| ||||||||||    
T  19912887 tttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttccaaagaaaacacaaaaa 19912806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 19933109 - 19933051
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  19933109 accaatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 19933051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 19964248 - 19964190
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  19964248 accaatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 19964190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 41815747 - 41815689
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||| || ||||||||||    
T  41815747 accaatgagaattatttttacatctttccataaaacttattccaaggagaacacaaaaa 41815689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 47779670 - 47779740
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| |||||||||||||| || |||||||||  ||||| ||||| |||||||||| ||||||    
T  47779670 ccaatgaaaattgtttttacatcttcccatgaaacttattctaaagaaaacacaaaaaactatgctacaaa 47779740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 48879448 - 48879506
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||| || || |||||||    
T  48879448 accaatgagaattatttttacatctttctataaaacttattccaaggagaatacaaaaa 48879506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 4069048 - 4069105
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaactt 168  Q
    ||||||||| |||| |||  ||||||||||||| |||||||||||| |||||||||||    
T  4069048 cattttctccataaccaataaccaatgaaaattctttttacatctttctataaaactt 4069105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 20123774 - 20123717
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||| ||||||||||| || ||||||  |||||||||    
T  20123774 ccaatgaaaattgtttttacatcttgctataaaactttttccaaagaatacacaaaaa 20123717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 8015788 - 8015732
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaact 167  Q
    |||||| |||||||||||  |||||| |||||| ||||||||||||| |||||||||    
T  8015788 cattttttctataatcaataaccaataaaaattgtttttacatcttcttataaaact 8015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 21654209 - 21654117
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||| ||||||||||||| |||||     |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  21654209 tttgttctccttttcattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 21654117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 11780090 - 11780145
Alignment:
Q  139 aaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactat 193  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||| |||||||||    
T  11780090 aaattatttttacatcttccaataaaatttattttaaagaaaacacgaaaaactat 11780145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 29713231 - 29713326
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaac 202  Q
    |||||||||||||||||| ||   |||||||||||| |||||||| ||| |||| ||| |||||  |||||| |||||| |||||||  |||||||    
T  29713231 tttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattctaaagatgacacaagaaactatactacaaac 29713326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 9818528 - 9818586
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||| || |||| |||||    
T  9818528 accaatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaa 9818586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 10720453 - 10720511
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||| || |||| |||||    
T  10720453 accaatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaa 10720511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 16917539 - 16917593
Alignment:
Q  134 aatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaa 188  Q
    |||||||||| |||||||||||||| || ||||||||| |||||| || ||||||    
T  16917539 aatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaaaacaaaa 16917593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 18206373 - 18206315
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  18206373 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 18206315  T

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Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 23106513 - 23106571
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || |||||||||| || || ||||||||||    
T  23106513 accaatgagaattatttttacatctttccatgaaacttattttaaggagaacacaaaaa 23106571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 24151672 - 24151638
Alignment:
Q  136 tgaaaattatttttacatcttcctataaaacttat 170  Q
    |||||||| ||||||||||||||||||||||||||    
T  24151672 tgaaaattgtttttacatcttcctataaaacttat 24151638  T

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Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 32491161 - 32491103
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||||||||||||||||| | || |||||||||  || || ||||||||||    
T  32491161 accaatgaaaattatttttacatctttccatgaaacttattataaggagaacacaaaaa 32491103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 41889231 - 41889289
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || || |||||||    
T  41889231 accaatgagaattatttttacatctttccatgaaacttatttcaaggagaatacaaaaa 41889289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 43107959 - 43107901
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  43107959 accaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 43107901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 45598964 - 45599022
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || || |||||||    
T  45598964 accaatgagaattatttttacatctttccatgaaacttatttcaaggaaaatacaaaaa 45599022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 47383466 - 47383524
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || |||||||||| || || ||||||||||    
T  47383466 accaatgagaattatttttacatctttccatgaaacttattttaaggagaacacaaaaa 47383524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 48937943 - 48937885
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||| | ||||||||||||||||| | |||||||||||| ||| || ||||||||||    
T  48937943 accaataagaattatttttacatctttccataaaacttattccaaggagaacacaaaaa 48937885  T

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Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 35181253 - 35181310
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||| ||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  35181253 ccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 35181310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 9158155 - 9158191
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaactt 168  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  9158155 ccaaagaaaattgtttttacatcttcctataaaactt 9158191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 14574631 - 14574687
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||| |||||||||||||||||||| || |||||||||   |||| ||||||||||    
T  14574631 caatggaaattatttttacatcttcccatgaaacttattatcaagaaaacacaaaaa 14574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 31549996 - 31549940
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| || ||||||||||||||||||||| |||||  ||||| ||| ||||||    
T  31549996 caatgaaagttgtttttacatcttcctataaaatttattctaaagaaaacgcaaaaa 31549940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 35084189 - 35084097
Alignment:
Q  97 tttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||| |||| ||||||||||||| |||||||    ||||| | |||| ||||||||||||  ||| |||||||||||||  | ||||||||||    
T  35084189 tttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttatttcaagaagaacacaaaaa 35084097  T

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Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 36576478 - 36576518
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatt 171  Q
    |||||||||||||||||||||||||| | || |||||||||    
T  36576478 accaatgaaaattatttttacatctttccatgaaacttatt 36576518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 47557695 - 47557663
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaa 164  Q
    |||||||||||| ||||||||||||||||||||    
T  47557695 ccaatgaaaattgtttttacatcttcctataaa 47557663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 6001 - 5894
Alignment:
Q  101 ctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactatgttaca 199  Q
    ||||| |||||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  6001 ctctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatttcaatgataacacaaaaaactatattaca 5902  T
Q  200 aactacta 207  Q
    ||||||||    
T  5901 aactacta 5894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 161038 - 160938
Alignment:
Q  108 tttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaa-aaactatgttacaaactact 206  Q
    |||||||||||| ||||  ||  ||||||||||||| |||||||| ||| |||| ||||||||||||| |||||||||| |||||||||| |||||||||    
T  161038 tttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaactatgttgcaaactact 160939  T
Q  207 a 207  Q
    |    
T  160938 a 160938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 3523 - 3466
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||    
T  3523 ccaatgaaaattatttttacatcttcctataaaactttttcaaaagaaaacacaaaaa 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 78023 - 78080
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||    
T  78023 ccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaa 78080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 668 - 606
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacaca-aaaactat 193  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||| |||||| ||||||||    
T  668 ccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacataaaactat 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 154927 - 154988
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaactat 193  Q
    |||||| ||||| |||||||||||| ||||||||||| ||||||||| || |||||||||||    
T  154927 ccaatgtaaattgtttttacatctttctataaaacttttttcaaagaaaatacaaaaactat 154988  T

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Target: scaffold0442 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 10112 - 10168
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||||| |||||||||||||||||||||||| ||  ||||| ||||||||||    
T  10112 caatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaa 10168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 40224 - 40302
Alignment:
Q  111 cattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||| ||||||| |||   |||||||||||| |||||||| ||| |||||||| ||||| |||||| ||||||||||    
T  40224 cattttttctataaccaatagccaatgaaaattgtttttacaactttctataaaatttattccaaagaaaacacaaaaa 40302  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 157860 - 157930
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaa 201  Q
    |||||||||||| ||||||||||| || || ||||||||| |||||| ||||| |||||||||| ||||||    
T  157860 ccaatgaaaattgtttttacatctccccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 157930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 914 - 959
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaaga 178  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||    
T  914 caatgaaaattatttttatatctttctataaaacttattccaaaga 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 4691 - 4749
Alignment:
Q  131 accaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||| ||||||||||||||||| | || ||||||||||||| || ||||| ||||    
T  4691 accaatgagaattatttttacatctttcgatgaaacttatttcaaggagaacactaaaa 4749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 44866 - 44809
Alignment:
Q  132 ccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    |||||||||||| |||||  || |||||||||||||| || |||||| ||||||||||    
T  44866 ccaatgaaaattgttttttaatattcctataaaactttttccaaagaaaacacaaaaa 44809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 1079 - 1135
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| | |||||||||||| ||||||||||| ||| ||| | ||||||||||    
T  1079 caatgaaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaa 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 9039 - 9095
Alignment:
Q  133 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 189  Q
    ||||||||| | |||||||||||| ||||||||||| ||| ||| | ||||||||||    
T  9039 caatgaaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaa 9095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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