View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1484_low_84 (Length: 221)
Name: NF1484_low_84
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1484_low_84 |
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Alignment Details
Target: chr4 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 28132964 - 28133117
Alignment:
| Q |
1 |
acagcatcctgattttcattactcaccggcgctgttcgtggttgcaaaacaagcctaggccttccaccaccaccactgccgttaccaacattctcgtttc |
100 |
Q |
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| T |
28132964 |
acagcatcctgattttcattactcaccggcgctgttcttggttgcaaaacaagcctaggccttccaccaccaccactgccgttaccaacattctcgtttc |
28133063 |
T |
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| Q |
101 |
tctcacttccaacactgaattcacctttctttttattccaattatcggaatccg |
154 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
28133064 |
tctcacttccaacactgaattcacctttcttcttattccaattatcggaatccg |
28133117 |
T |
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