View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14853_high_11 (Length: 313)
Name: NF14853_high_11
Description: NF14853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14853_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 7 - 300
Target Start/End: Complemental strand, 55342712 - 55342415
Alignment:
| Q |
7 |
tgcaacaccatgttggtgaaatcatcctctacttaatttgcactatatata----gatgctcaattgggtagggacaaaacgagaagcaaacaccaatcc |
102 |
Q |
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| T |
55342712 |
tgcaacaccatgttggtgaaatcatcctctacttaatttgcactatatatatatagatgctcaattggatagggacaaaacgagaagcaaacaccaatcc |
55342613 |
T |
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| Q |
103 |
atataaatcaagtttgaatcactcctatatttaactatagaatggatgaggttgcggtcaagccaacaattgacataattgtgtgtgctaccacaaacaa |
202 |
Q |
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| T |
55342612 |
atataaatcaagtttgaatcactcctatatttaactatagaatgggtgaggttgcggtcaagccaacaattgacataattgtgtgtgctaccacaaacaa |
55342513 |
T |
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| Q |
203 |
tactactaatgctaaaccaatcaccaagccatcacattcacagtcacaaccattcttaactaagatccatgcaggctactttttcatttgtgtttcct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55342512 |
tactactaatgctaaaccaatcaccaagccatcacattcacagtcacaaccattcttaactaagatccatgcaggctactttttcatttgtgtttcct |
55342415 |
T |
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