View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14853_low_2 (Length: 461)
Name: NF14853_low_2
Description: NF14853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14853_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 10 - 446
Target Start/End: Original strand, 37557486 - 37557922
Alignment:
| Q |
10 |
tcatttctttcaatatatggtaaattagcaattcaatattttcacgtcaataagctgaaagattcattaaaaacagattgctggaatccactggtggtat |
109 |
Q |
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| T |
37557486 |
tcatttctttcaatatatggtaaattagcaattcaatattttcacgtcaataagctgaaagattcattaaaaacagattgctggaatccactggtggtat |
37557585 |
T |
|
| Q |
110 |
aaaactgaaagccatgctgcagagcttacttcaggatattacaacttaagtgatagagatggataccgtcccgtagcaaggatgtttgctcgacataatg |
209 |
Q |
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| T |
37557586 |
aaaactgaaagccatgctgcagagcttacttcaggatattacaacttaagtgatagagatggataccgtcccgtagcaaggatgttcgctcgacataatg |
37557685 |
T |
|
| Q |
210 |
ctatcttgaatttcacatgtcatgaaaagagaaattcggagcaaccagaagaagccaaaagttgtgcccaggaacttgttcagcaggtaattcattctgg |
309 |
Q |
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| T |
37557686 |
ctatcttgaatttcacatgtcttgagatgagaaattcggagcaaccagaagaagccaaaagttgtgcccaggaacttgttcagcaggtaattcattctgg |
37557785 |
T |
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| Q |
310 |
cttcaaatctaatctaatatgttctctgcaaaatcaaaaagaatctgtgattgataaactccatgacatgttgctattcatgaaacaagttactcataat |
409 |
Q |
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| T |
37557786 |
cttcaaatctaatctaatatgttctctgcaaaatcaaaaagaatctgtgattgataaactccatgacatgttgctattcatgaaacaagttactcataat |
37557885 |
T |
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| Q |
410 |
ttagcctgttttatgttcatttctttataggtcttga |
446 |
Q |
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| T |
37557886 |
ttagcctgttttatgttcatttctttataggtcttga |
37557922 |
T |
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