View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14853_low_23 (Length: 201)
Name: NF14853_low_23
Description: NF14853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14853_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 9e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 1784398 - 1784230
Alignment:
| Q |
16 |
aaaatacatattatataaaataatgtgattacactaannnnnnnaacgaattattttatataaggcggaataagtacaattactatacttctaactcgag |
115 |
Q |
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| T |
1784398 |
aaaatacatattatataaa-taatgtgattacactaatttttttaacgaattattttatataaggcggaataagtacaattactatacttctaactcgag |
1784300 |
T |
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| Q |
116 |
attaagtacaagggatacttgatccaaccaaataaacaccacactgaaaaatattaagtgagtgtataat |
185 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1784299 |
atttagtacaagggatacttgatccaaccaaataaacaccacactgaaaaatattaagtgagtgtataat |
1784230 |
T |
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