View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14853_low_4 (Length: 424)
Name: NF14853_low_4
Description: NF14853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14853_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 13 - 407
Target Start/End: Original strand, 35746170 - 35746564
Alignment:
| Q |
13 |
atgaaattttaggttggtaatagaaaaatttgagacatatgcatgcatgaatatgcatgcatttagggggctagtcctaacgttgatgcaaaaaccaaat |
112 |
Q |
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| T |
35746170 |
atgaaattttaggttggtaatagaaaaatttgagacatatgcatgcatgaatatgcatgcatttagggggctagtcctaacgttgatgcaaaaaccaaat |
35746269 |
T |
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| Q |
113 |
taatgatatgatgagaattgtaatggaactttctcaaaagagagagccaaggaataaaaatgaaagaggaaggattataaaggcaccttcccccttccta |
212 |
Q |
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| T |
35746270 |
taatgatatgatgagaattgtaatggaactttctcaaaagagagagccaaggaattaaaatgaaagaggaaggattataaaggcaccttcccccttccta |
35746369 |
T |
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| Q |
213 |
tctatttgatcagtttgagttgttttcgggtatatggtttagtgtttatgctttgtgtcttcatcatgaaaggtaactcatgcacaagggttggctcatt |
312 |
Q |
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| T |
35746370 |
tctatttgatcagtttgagttgttttcgggtatatggtttagtgtttatgctttgtgtcttcatcatgaaaggtaactcatgcacaagggttggctcatt |
35746469 |
T |
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| Q |
313 |
tctaaaaataagagattatgttaaacccaaacagcttatatatttatggctttatatttattctatatttaaggaacttttctctttgaatctaa |
407 |
Q |
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| T |
35746470 |
tctaaaaataagagattatgttaaacccaaacagcttatatatttatggctttatatttattctatatttaaggaacttttctctttgaatctaa |
35746564 |
T |
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