View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14854_high_33 (Length: 229)
Name: NF14854_high_33
Description: NF14854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14854_high_33 |
 | |
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| [»] scaffold0437 (2 HSPs) |
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| [»] scaffold0012 (2 HSPs) |
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| [»] scaffold0886 (1 HSPs) |
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| [»] scaffold0363 (1 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0006 (1 HSPs) |
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| [»] scaffold0007 (1 HSPs) |
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| [»] scaffold0607 (1 HSPs) |
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| [»] scaffold0292 (1 HSPs) |
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| [»] scaffold0093 (1 HSPs) |
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| [»] scaffold0291 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0002 (1 HSPs) |
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| [»] scaffold0265 (1 HSPs) |
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| [»] scaffold0068 (1 HSPs) |
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| [»] scaffold0196 (1 HSPs) |
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| [»] scaffold0238 (1 HSPs) |
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| [»] scaffold0216 (1 HSPs) |
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| [»] scaffold0134 (1 HSPs) |
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| [»] scaffold0063 (1 HSPs) |
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| [»] scaffold0020 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 14982400 - 14982481
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14982400 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctc---ttgtctgtcctctctccttgcttatc |
14982481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 32569840 - 32569924
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
32569840 |
gcataggatagaggtttctcgaggtgtcaatctagttgggatgtcgatgttgcctcttaatgactgtcctctctccttgcttatc |
32569924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 24127892 - 24127809
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||| || ||||||||||||| | ||||||| |||||||||||||| ||||||||| |
|
|
| T |
24127892 |
gcataggatggaggtttctcgaggtgccaacctagctgggatgtcgatgatacctcttgatgtctgtcctctcttcttgcttat |
24127809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 14372254 - 14372171
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
14372254 |
gcataggatggagatttctcggagtgccaacctagttgggatgtcgatgttgcctcttgatgtctgtccattctccttgcttat |
14372171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 3056947 - 3057031
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| |||||||| ||| |||| ||||||||||||||||||| |||||| || |||||| ||||||||||||||| |
|
|
| T |
3056947 |
gcataggatggaggtttctcggggtaccaacttagttgggatgtcgatgttgtctcttgatgcctgtccactctccttgcttatc |
3057031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 8462017 - 8462101
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || |||||||||| ||||| |||||||||||||||| ||||||||| |||||||| | |||||||||||| |
|
|
| T |
8462017 |
gcataggatggaggtctctcgaggtgccaacctagttgggatgtcgatgatgcctcttgatgtctgtctacgttccttgcttatc |
8462101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 12435964 - 12436047
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| |||| ||| |||| ||||| |||||||||||||||| |||||| || || |||||||||||||||||||| |
|
|
| T |
12435964 |
gcataggatggaggtttgtcggggtgccaacctagttgggatgtcgatgatgcctcctgatgcatgtcctctctccttgcttat |
12436047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 9351192 - 9351108
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||| ||||||||||||||||||| || ||| || ||||| ||||||| ||||||| |
|
|
| T |
9351192 |
gcataggatggaggtttctcggggtgccaacctagttgggatgtcgatgttgtctattgatgcatgtccactctcctcgcttatc |
9351108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 34338162 - 34338078
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| | ||||||| || ||||| ||||||||| |||||| |
|
|
| T |
34338162 |
gcataggatggaggtctctcggggtgccaacctagttgggatgtcgatgattcctcttgatggctgtcatctctccttacttatc |
34338078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 18306795 - 18306714
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| || ||| || || |||||||||||||||||||| |
|
|
| T |
18306795 |
gcataggatggaggtatctcg-ggtgccaacctagttgggatgtcgatgatgactcctgatgcctgtcctctctccttgctta |
18306714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 22705327 - 22705409
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||| |||| |||||||| ||||| ||||||||||||| |||| ||||||| ||| |||| | |||||| ||||||| |
|
|
| T |
22705327 |
ataggatggatgtttatcgaggtgccaacctagttgggatgtcggtgttacctcttgatgtgtgtcatttctcctagcttatc |
22705409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 20898971 - 20899051
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgc |
92 |
Q |
| |
|
|||||||| |||| ||||| | |||| ||||| ||||||||||||| |||||||||||| || |||||||||||||||| |
|
|
| T |
20898971 |
agcatagggtggaggtttcctggggtgccaacctagttgggatgtcggtgttgcctcttgatgcttgtcctctctccttgc |
20899051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 10192862 - 10192945
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||| |||||| ||||| | |||||||||||||| ||||||||| |||||||| | ||||||||||| |
|
|
| T |
10192862 |
gcataggatggaggtctcttgaggtgccaacctaattgggatgtcgatgatgcctcttgatgtctgtctacgttccttgcttat |
10192945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 14641446 - 14641521
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcc |
88 |
Q |
| |
|
|||||||||||| | ||| || |||| ||||| ||||||||||||| |||| ||||||| ||| |||||||||||| |
|
|
| T |
14641446 |
gcataggatggagggttcccggggtgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctcc |
14641521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 13565925 - 13566005
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
||||||| || |||||| || ||| ||||| ||||||||||||| |||| ||||||| || |||||||||||| |||||| |
|
|
| T |
13565925 |
ataggatagaggtttcttgatgtgccaacctagttgggatgtcgttgttccctcttgatgcatgtcctctctccctgctta |
13566005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 30884412 - 30884455
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcg |
58 |
Q |
| |
|
||||||||||||||| ||| |||||||||| ||||||||||||| |
|
|
| T |
30884412 |
ataggatggaagtttatcggggtgtcaacctagttgggatgtcg |
30884455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 9696926 - 9696844
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| || ||||| ||| |||| |||||||||||||||| || || || || |||||||||||||||||||| |
|
|
| T |
9696926 |
gcataggatggaggtatctcggcgtgccaacttagttgggatgtcgatgatgacttctgatgcctgtcctctctccttgctta |
9696844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 26522735 - 26522789
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcct |
67 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| ||||| |
|
|
| T |
26522735 |
gcataggatggaggtctctcggggtgccaacctagttgggatgtcgatgatgcct |
26522789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 10138883 - 10138948
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtc |
80 |
Q |
| |
|
||||||| || || ||||| |||| ||||| |||||||||||||| | ||||||||| |||||||| |
|
|
| T |
10138883 |
ataggatagaggtgtctcggggtgccaacctagttgggatgtcgacgatgcctcttgatgtctgtc |
10138948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 13234932 - 13234988
Alignment:
| Q |
40 |
caaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| |||||||||||||||| ||| | || |||||||||||||||||| ||||| |
|
|
| T |
13234932 |
caacctagttgggatgtcgatgatgctttctgatgtctgtcctctctccttacttat |
13234988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 13570477 - 13570557
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||| | |||||||| |||| ||| | ||||||||||| | |||| ||||||| || |||||||||||| |||||| |
|
|
| T |
13570477 |
ataggatgaatgtttctcggggtgccaatctagttgggatgtaggtgttccctcttgatgcatgtcctctctccctgctta |
13570557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 61; Significance: 2e-26; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 10568368 - 10568284
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||||||||||||||||||| |||| ||||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10568368 |
gcataggatggaagtttctcggggtgccaacctagttggtaagtcgatgttgcctcttgatgtctgtcctctctccttgcttatc |
10568284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 17274719 - 17274803
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
17274719 |
agcataggatggagatttctcacggtgccaaccaagttgggatgtcgatgttgcctcttgatgtctgtccattctccttgcttat |
17274803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 6001434 - 6001513
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctt |
94 |
Q |
| |
|
|||||||| | |||||||| |||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
6001434 |
ataggatgaaggtttctcgcggtgtcaacctagttggaatgtcgatgttgcctcttaatgtttgtcctctctccttgctt |
6001513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 16290865 - 16290946
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgct |
93 |
Q |
| |
|
||||||||||||| ||||| || |||| ||||| ||||||||||||| |||||||||||| ||| |||||| |||||||||| |
|
|
| T |
16290865 |
agcataggatggaggtttcccggggtgccaacctagttgggatgtcggtgttgcctcttgatgtttgtcctttctccttgct |
16290946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 14413346 - 14413430
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||| |||||||| || |||||||||| ||||| |||||||||||||||| |||| |||| ||| ||||| |||||||||||||| |
|
|
| T |
14413346 |
agcagaggatggaggtgtctcgaggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttat |
14413430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 21593193 - 21593277
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||| | || ||||| |||| ||||| |||||| ||||||||| ||||||||| || |||||||||||||||||||||| |
|
|
| T |
21593193 |
gcataggatgaaggtctctcggggtgccaacctagttggaatgtcgatgatgcctcttgatgcctgtcctctctccttgcttatc |
21593277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 45268903 - 45268819
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||| ||| |||||||| |||| ||||| ||||| | ||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
45268903 |
gcataggaaggaggtttctcggggtgccaacctggttggtaagtcgatgttgcctcttgatgcctgtcctctctccttgcttatc |
45268819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 16889984 - 16890066
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
||||| |||||| || ||||| |||| ||||| |||||||||||||||| || ||| || || |||||||||||||||||||| |
|
|
| T |
16889984 |
gcataagatggaggtatctcggggtgccaacctagttgggatgtcgatgatgactcctgatgcctgtcctctctccttgctta |
16890066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 26657677 - 26657759
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| ||||| ||| ||| |||| ||||||||||||| |||| ||||||| || ||||||||||||||||||| |
|
|
| T |
26657677 |
gcataggatggaggtttcccgaagtgccaacttagttgggatgtcggtgtttcctcttgatgcatgtcctctctccttgctta |
26657759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 26867471 - 26867541
Alignment:
| Q |
16 |
taggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctct |
86 |
Q |
| |
|
||||||||| ||||| ||||||| ||||| |||||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
26867471 |
taggatggaggtttcccgaggtgccaacctagttgggatgtcgatgatgcctcttgaagcctgtcctctct |
26867541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 23595387 - 23595467
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgct |
93 |
Q |
| |
|
|||||||||||| || |||| ||| ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| |
|
|
| T |
23595387 |
gcataggatggaggtctctcagggtaccaacctagttgggatgtcgatgatgcctcttgatgcgtgtcctctctccttgct |
23595467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 23604309 - 23604389
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgct |
93 |
Q |
| |
|
|||||||||||| || |||| ||| ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| |
|
|
| T |
23604309 |
gcataggatggaggtctctcagggtaccaacctagttgggatgtcgatgatgcctcttgatgcgtgtcctctctccttgct |
23604389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 29840871 - 29840955
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||| |||||| |||||||| |||| ||||| ||||||||||||||||||| ||||| || ||||| ||||| ||||||||| |
|
|
| T |
29840871 |
gcatatgatggaggtttctcggggtgccaacctagttgggatgtcgatgttgtttcttgatgcatgtccactctctttgcttatc |
29840955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 17959966 - 17959884
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||| | |||||||| |||| | ||| |||| |||||||||||||||||||| || |||||||||||| ||| ||||| |
|
|
| T |
17959966 |
ataggatgaaggtttctcgtggtgcctacctagttaggatgtcgatgttgcctcttaatgcctgtcctctctctttgtttatc |
17959884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 41600734 - 41600792
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttg |
71 |
Q |
| |
|
|||||||||| |||||||||| |||| ||| | ||||||||| |||||||||||||||| |
|
|
| T |
41600734 |
gcataggatgaaagtttctcggggtgccaatctagttgggatatcgatgttgcctcttg |
41600792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 18036880 - 18036809
Alignment:
| Q |
17 |
aggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcc |
88 |
Q |
| |
|
|||||||| ||| |||| |||| |||| ||||||||||||| |||| ||||||| ||| |||||||||||| |
|
|
| T |
18036880 |
aggatggaggttcctcggggtgccaacatagttgggatgtcggtgtttcctcttgatgtttgtcctctctcc |
18036809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 24184819 - 24184744
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcc |
88 |
Q |
| |
|
|||||||||||| | ||| || | || ||||| ||||||||||||| |||| ||||||| ||| |||||||||||| |
|
|
| T |
24184819 |
gcataggatggagggttcccgggatgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctcc |
24184744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 29233407 - 29233450
Alignment:
| Q |
48 |
ttgggatgtcgatgttgcctcttgttgtctgtcctctctccttg |
91 |
Q |
| |
|
||||||||| | |||||||||||| ||||||||||||||||||| |
|
|
| T |
29233407 |
ttgggatgttggtgttgcctcttgatgtctgtcctctctccttg |
29233450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 5781148 - 5781065
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||||||||||||||||||| | || ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
5781148 |
gcataggatggaagtttctcgggatgccaacctagttgggatgtcgatgttgcctcttaatgtctgtcctccctccttgcttat |
5781065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 19068762 - 19068679
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
19068762 |
gcataggatggaggtttctcagggtgccaacctagtttggatgtcgatgttgcctcttaatgtctgtcctctctcattgcttat |
19068679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 21877969 - 21877885
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| |||| |||| ||| ||||| ||||||||||||||| |
|
|
| T |
21877969 |
gcataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttatc |
21877885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 12851852 - 12851784
Alignment:
| Q |
29 |
tctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||| ||| ||||| ||||||||||| |||| ||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
12851852 |
tctcgacgtgccaacctagttgggatgttgatgatgcctcttgatgtctgtccactctccttgcttatc |
12851784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 35341899 - 35341980
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| || ||||| |||| |||| | ||||||||||||||| || |||||| || |||||||||||||||||||| |
|
|
| T |
35341899 |
gcataggatggaggtatctcggggtgccaacta-gttgggatgtcgatgatgactcttgatgcctgtcctctctccttgctta |
35341980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 13642876 - 13642792
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| ||| ||| | |||||| ||||||||| |||||| || ||||||||||||||| ||||||||| |
|
|
| T |
13642876 |
gcataggatggaggtatctcggggtaccaatctagttggaatgtcgatgatgcctcctgatgtctgtcctctctcattgcttatc |
13642792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 28682825 - 28682741
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| | || ||||| |||||||||||||||| ||||||||| |||||||| | |||||||||||| |
|
|
| T |
28682825 |
gcataggatggaggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtctgtctacgttccttgcttatc |
28682741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 31329345 - 31329262
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||||| | | ||| | |||||| ||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
31329345 |
gcataggatggaggtatctcgggataccaatctagttggaatgtcgatgatgcctcttgatgcctgtcctctctccttgcttat |
31329262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 21711606 - 21711528
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttg |
91 |
Q |
| |
|
|||||||||||| | ||| || |||| ||||| ||||||||||||| |||| ||||||| || ||||||||||||||| |
|
|
| T |
21711606 |
gcataggatggagggttcccggggtgccaacctagttgggatgtcggtgttccctcttgatgcttgtcctctctccttg |
21711528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 34995517 - 34995435
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| | ||||| |||| ||||| |||||||||||||||| || ||| || || |||||||| ||||||||||| |
|
|
| T |
34995517 |
gcataggatggagttatctcggggtgccaacctagttgggatgtcgatgatgactcctgatgcctgtcctccctccttgctta |
34995435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 5784526 - 5784469
Alignment:
| Q |
40 |
caaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||| || |||||| ||||||||||||||| |
|
|
| T |
5784526 |
caacctagttggaatgtcgatgatgcctcttgatgcctgtccactctccttgcttatc |
5784469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 39324412 - 39324348
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgt |
79 |
Q |
| |
|
|||||||||| || ||||| ||| ||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
39324412 |
ataggatggaggtctctcggagtgccaacctagttgggatgtcgatgatgcctcttgatgtctgt |
39324348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 15614747 - 15614822
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcc |
88 |
Q |
| |
|
|||||||||||| | ||| || |||| ||||| ||||||||||||| |||| ||||||| || |||||||||||| |
|
|
| T |
15614747 |
gcataggatggagggttcccggggtgccaacctagttgggatgtcggtgttccctcttgatgcttgtcctctctcc |
15614822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 29998639 - 29998557
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| |||||| || ||| ||| || ||||| |||||||||||||||| || |||||| || ||||||||||| ||||||||| |
|
|
| T |
29998639 |
gcatacgatggaggtctcttgagatgccaacctagttgggatgtcgatgatgtctcttgatgcctgtcctctct-cttgcttat |
29998557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 16574367 - 16574447
Alignment:
| Q |
16 |
taggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||||||| || ||||| |||| ||| |||||||||||||||| || ||| || || |||||||||||| |||||||| |
|
|
| T |
16574367 |
taggatggaggtatctcggggtgccaatttagttgggatgtcgatgatgactcctgatgcctgtcctctctcattgcttat |
16574447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0437 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0437
Description:
Target: scaffold0437; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 14398 - 14314
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| | || ||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14398 |
gcataggatggaggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtctgtcctctctccttgcttatc |
14314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0437; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 11424 - 11499
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcc |
88 |
Q |
| |
|
|||||||||||| | ||| || |||| ||||| ||||||||||||| |||| ||||||| ||| |||||||||||| |
|
|
| T |
11424 |
gcataggatggagggttcccggggtgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctcc |
11499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 16053462 - 16053546
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||||||||||| |||||||| | |||||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
16053462 |
agcataggatggaggtttctcgggatgtcaacctagttgagatgtcgatgatgcctcttgatgtctgtcatctctccttgcttat |
16053546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 1051382 - 1051303
Alignment:
| Q |
16 |
taggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
||||||||| ||||| ||||||| ||||| ||||||||||||| |||| ||||||| ||| ||||||||||||||||||| |
|
|
| T |
1051382 |
taggatggaggtttcccgaggtgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctccttgctta |
1051303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 16037967 - 16038050
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||||| ||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
16037967 |
gcataggatggaggtctctcggggttccaacctagttgagatgtcgatgatgcctcttgatgtctgtcatctctccttgcttat |
16038050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 51661690 - 51661773
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
51661690 |
gcataggatggagagttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatgtctgtccattctcattgcttat |
51661773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 3736490 - 3736575
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||| |||||||| || ||||| |||| ||||| |||||||||||||||| |||| |||| ||| ||||| ||||||||||||||| |
|
|
| T |
3736490 |
agcagaggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttatc |
3736575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 16041512 - 16041595
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||||| ||| ||||| ||||| |||||||||| ||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
16041512 |
gcataggatggaggtctctcggggttccaacctagttgagatgtcgatgatgcctcttgatgtctgtcatctctccatgcttat |
16041595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 18517688 - 18517771
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| | ||||| | || ||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
18517688 |
gcataggatggagctatctcgggatgccaacctagttgggatgtcgatgttgcctcttgatgcatgtccactctccttgcttat |
18517771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 25760029 - 25760106
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcct |
89 |
Q |
| |
|
||||||||||||| |||| ||| ||| ||||| ||||||||||||| |||||||||||| || ||||||||||||| |
|
|
| T |
25760029 |
agcataggatggaggttttccgaagtgccaacctagttgggatgtcggtgttgcctcttgatgcttgtcctctctcct |
25760106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 2928643 - 2928559
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||| |||||| || |||||| || ||||| |||||| ||||||||||||| ||||| || |||||| |||||||||||||| |
|
|
| T |
2928643 |
agcataagatggaggtctctcgaattgccaacctagttggaatgtcgatgttgcttcttgatgactgtccactctccttgcttat |
2928559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 3580495 - 3580411
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| | |||||||||| ||||| ||||||||| |||||| ||||||||| |||||||| | |||||||||||| |
|
|
| T |
3580495 |
gcataggatggagttctctcgaggtgccaacctagttgggatttcgatgatgcctcttgatgtctgtctacgttccttgcttatc |
3580411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 19826480 - 19826396
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||| ||| |||||| | |||| ||||| ||||||||||||||||||||||||| || |||| || ||||||||||||| |
|
|
| T |
19826480 |
gcataggacggaggtttcttggggtgccaacctagttgggatgtcgatgttgcctcttaatgcttgtcttccctccttgcttatc |
19826396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 47165954 - 47165870
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| | ||||| |||| ||||| |||||||||||||||| ||||||||| |||||||| | |||||||||||| |
|
|
| T |
47165954 |
gcataggatggagttctctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgtctgtctacgttccttgcttatc |
47165870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 26430267 - 26430350
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || | || |||| ||||| |||| ||||||||||| ||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
26430267 |
gcataggatggaggtattacggggtgccaacctagttaggatgtcgatgatgcctcttgatgtatgtcctctctccttgtttat |
26430350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 5813628 - 5813544
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||||||||| | |||||||| | || ||||| |||||| | ||||||||||||||||| || || |||||||| ||| ||||| |
|
|
| T |
5813628 |
agcataggatgaaggtttctcgggatgccaacctagttggtaagtcgatgttgcctcttgatgcctatcctctcttcttacttat |
5813544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 16309733 - 16309657
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcct |
89 |
Q |
| |
|
|||||||||||| ||| || |||| |||| |||||||||||||| | | ||||||| ||||||||||||||||| |
|
|
| T |
16309733 |
gcataggatggaggttctccggggtgccaacttagttgggatgtcgaagctacctcttgatgtctgtcctctctcct |
16309657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 18490727 - 18490651
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcct |
89 |
Q |
| |
|
|||||||||||| ||| || |||| |||| |||||||||||||| | | ||||||| ||||||||||||||||| |
|
|
| T |
18490727 |
gcataggatggaggttctccggggtgccaacttagttgggatgtcgaagctacctcttgatgtctgtcctctctcct |
18490651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 20477435 - 20477518
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||| |
|
|
| T |
20477435 |
gcataggatggaggtatctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgtctgtcctttctccttgcttat |
20477518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 12102852 - 12102903
Alignment:
| Q |
46 |
agttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
12102852 |
agttgggatgtcgatgttgcctcttgatgtatgtcctctctccttgcttatc |
12102903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36802333 - 36802250
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||| ||||| ||||||||||||||||||| | | ||||||||||||||||||| |
|
|
| T |
36802333 |
gcataggatggaggtttctcggggtgccaacctagttgagatgtcgatgttgcctcttaatacccgtcctctctccttgcttat |
36802250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 17679782 - 17679701
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctt |
94 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| |||| |||| ||| ||||| |||||||||||| |
|
|
| T |
17679782 |
gcataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgctt |
17679701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 22170034 - 22169950
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| | || ||||| | ||||||||| |||| ||||||||| || |||||||||||||||||||||| |
|
|
| T |
22170034 |
gcataggatggaggtctctcgggatgccaacctaattgggatgttgatgatgcctcttgatgcctgtcctctctccttgcttatc |
22169950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 17678357 - 17678274
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || |||||||||| ||||| | |||||||||||||| ||||||||| |||||||| | ||||||||||| |
|
|
| T |
17678357 |
gcataggatggaggtctctcgaggtgccaacctaattgggatgtcgatgatgcctcttgatgtctgtctacgttccttgcttat |
17678274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 29216615 - 29216697
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||| || |||| ||||| |||| | |||||||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
29216615 |
ataggatggaggtctctctaggtgccaacttaattgggatgtcgatgatgcctcttgatgcatgtcctctctccttgcttatc |
29216697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 29329914 - 29329996
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||| || |||| ||||| |||| | |||||||||||||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
29329914 |
ataggatggaggtctctctaggtgccaacttaattgggatgtcgatgatgcctcttgatgcatgtcctctctccttgcttatc |
29329996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 9892183 - 9892120
Alignment:
| Q |
33 |
gaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||| ||||| | |||||||||||||| || |||||| |||||||| ||||||||||||||| |
|
|
| T |
9892183 |
gaggtgccaacctaattgggatgtcgatgatgtctcttgatgtctgtcttctctccttgcttat |
9892120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 20632479 - 20632558
Alignment:
| Q |
18 |
ggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||||| || ||||| |||| ||||| |||||||||||||||| |||| |||| ||| ||||| |||||||||||||| |
|
|
| T |
20632479 |
ggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccattctccttgcttatc |
20632558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 28522884 - 28522938
Alignment:
| Q |
35 |
ggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcct |
89 |
Q |
| |
|
|||| ||||| |||||||||||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
28522884 |
ggtgccaacctagttgggatgtcaatgtttcctcttgatgtctgtcctctctcct |
28522938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 26916638 - 26916722
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| | ||||| |||| ||||| |||||||||||||| | || ||| || ||| |||||| |||||||||||||| |
|
|
| T |
26916638 |
gcataggatggagatgtctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgtttgtcctttctccttgcttatc |
26916722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 34454900 - 34454979
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgc |
92 |
Q |
| |
|
|||||||||||| | ||||| |||| ||||| | |||||||||||||| || |||||| || || |||||||||||||| |
|
|
| T |
34454900 |
gcataggatggagatgtctcggggtgccaacctaattgggatgtcgatgatgtctcttgatgcctctcctctctccttgc |
34454979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 40926529 - 40926474
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctc |
68 |
Q |
| |
|
|||||||||||| ||||| || |||| ||||| |||||||||||||||||| |||| |
|
|
| T |
40926529 |
gcataggatggaggtttcccggggtgccaacctagttgggatgtcgatgtttcctc |
40926474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 17377573 - 17377491
Alignment:
| Q |
14 |
cataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||||||||| |||||| | |||| ||||| ||||| ||| ||| |||||||||||| || ||||| |||||| ||||||| |
|
|
| T |
17377573 |
cataggatggaggtttcttggggtgccaacctagttgagatatcgttgttgcctcttgatgcatgtccactctccatgcttat |
17377491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 24524144 - 24524060
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| | ||||| |||| ||||| |||||||||||||| | || ||| || || |||||| |||||||||||||| |
|
|
| T |
24524144 |
gcataggatggagatgtctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgcttgtcctttctccttgcttatc |
24524060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 28698206 - 28698286
Alignment:
| Q |
16 |
taggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||| || |||||||| | || ||||| | |||| ||||||||||| || ||| ||| |||||||||||||||||||| |
|
|
| T |
28698206 |
taggatagatgtttctcgggatgccaacctaattggaatgtcgatgttaccccttaatgtttgtcctctctccttgcttat |
28698286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 38376932 - 38376856
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcct |
89 |
Q |
| |
|
|||||||||||| | |||||||||| ||||| |||| ||||||||||| | ||||||| || ||||| ||||||| |
|
|
| T |
38376932 |
gcataggatggaggcctctcgaggtgccaacctagttaggatgtcgatgatacctcttgatgcatgtccactctcct |
38376856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 103716 - 103799
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||| |||||||||||||||||||||||||| |||| |||| ||||||||||||| |
|
|
| T |
103716 |
gcataggatggagatttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatgtcggtccattctccttgcttat |
103799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 55844 - 55760
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || | ||| |||| ||||| |||||||||||||||| |||| |||| ||||||||| ||||||||||||||| |
|
|
| T |
55844 |
gcataggatggaggtgtgtcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtctgtccactctccttgcttatc |
55760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 10423869 - 10423787
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
||||| |||||| |||||||| |||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||||||| |
|
|
| T |
10423869 |
gcataagatggaggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatgcttgtccactctccttgctta |
10423787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 2583127 - 2583065
Alignment:
| Q |
33 |
gaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
2583127 |
gaggtgccaacttagttgggatgtcgatgatgcctcttgatgtctgtcctctctccttgctta |
2583065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 20808824 - 20808741
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || | || | |||||||| |||||||||||||||| || |||||| || ||||||||||||||||||||| |
|
|
| T |
20808824 |
gcataggatggaggtctatcaaagtgtcaacttagttgggatgtcgatgatgtctcttgatgcctgtcctctctccttgcttat |
20808741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 24961874 - 24961941
Alignment:
| Q |
29 |
tctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| |||| ||||| |||||||||||||||| || ||| || |||||||||||||||||||||||| |
|
|
| T |
24961874 |
tctcggggtgccaacctagttgggatgtcgatgatgtctcctgatgtctgtcctctctccttgcttat |
24961941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 27035920 - 27035838
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| || ||||| | || ||||| |||||||||||||||| ||||||||| || |||||||||||||| |||| |
|
|
| T |
27035920 |
gcataggatggaggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgcttgtcctctctccttactta |
27035838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 13309444 - 13309371
Alignment:
| Q |
16 |
taggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcct |
89 |
Q |
| |
|
||||||||| || ||||| |||| ||||| |||||||||||||||| ||||||||| || |||||| ||||||| |
|
|
| T |
13309444 |
taggatggaggtctctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgcctgtccactctcct |
13309371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 907727 - 907647
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgct |
93 |
Q |
| |
|
|||||||||||| || |||| |||| ||| | |||||||||||||||| || |||||| |||||||| |||||||||||| |
|
|
| T |
907727 |
gcataggatggaggtctctcagggtgccaatctagttgggatgtcgatgatgtctcttgatgtctgtcatctctccttgct |
907647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 16280441 - 16280525
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| |||| ||| | | |||||||||||||| |||| |||| ||| ||||| ||||||||||||||| |
|
|
| T |
16280441 |
gcataggatggaggtgtctcggggtgccaatctaattgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttatc |
16280525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 23487461 - 23487545
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| ||| ||| | |||||| ||||||||| |||||| || || |||||||||||||||||||||| |
|
|
| T |
23487461 |
gcataggatggaggtatctcggggtaccaatctagttggaatgtcgatgatgcctcctgatgcctgtcctctctccttgcttatc |
23487545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 11779389 - 11779310
Alignment:
| Q |
17 |
aggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||| || |||| |||| ||||| | ||||||| ||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
11779389 |
aggatggagtttactcggggtgccaacctaattgggataccgatgttgcctcttgatgtctgtcctctctccttacttat |
11779310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 34528987 - 34528908
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgc |
92 |
Q |
| |
|
|||||||||||| ||||| || |||| ||||| ||||||||||||| |||| ||||||| || | || |||||||||||| |
|
|
| T |
34528987 |
gcataggatggaggtttcccggggtgccaacctagttgggatgtcgctgtttcctcttgatgcccgttctctctccttgc |
34528908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 21813173 - 21813255
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| |||| |||| ||| | ||| | ||||||||||| |
|
|
| T |
21813173 |
gcataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttttccacactccttgctta |
21813255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 35877006 - 35877067
Alignment:
| Q |
35 |
ggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| ||||| ||| ||||| || ||||||||||| |
|
|
| T |
35877006 |
ggtgccaacctagttgggatgtcgatgttgcttcttgatgtttgtccactatccttgcttat |
35877067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 41343904 - 41343856
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatg |
61 |
Q |
| |
|
|||||||||||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
41343904 |
gcataggatggacgcctctcgaggtgtcaacctagttgggatgtcgatg |
41343856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 41574366 - 41574288
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgc |
92 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| ||||||||||| | |||| ||| ||| |||||||||| ||||||||| |
|
|
| T |
41574366 |
gcataggatggaggtttccag-ggtgtcaacctagttgggatgttggtgtttccttttgatgtctgtcctttctccttgc |
41574288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 34517688 - 34517773
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||||||||||| |||||||| | || ||||| |||||||||||||||| | ||||| || |||| | |||||||||||||| |
|
|
| T |
34517688 |
agcataggatggaggtttctcgggatgccaaccttattgggatgtcgatgtttcttcttgatgcttgtcatttctccttgcttatc |
34517773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 1624078 - 1624022
Alignment:
| Q |
40 |
caaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| ||||||||| | |||||||||||||| ||| ||||| |||||||| ||||| |
|
|
| T |
1624078 |
caacctagttgggatattgatgttgcctcttgatgtgtgtccactctcctttcttat |
1624022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0886 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0886
Description:
Target: scaffold0886; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 2792 - 2865
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctct |
86 |
Q |
| |
|
|||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||| ||| |||||| |
|
|
| T |
2792 |
gcataggatggaggtttctcgaggtaccaacctagttgggatgtcgatgttgcctcttgatgtatgttctctct |
2865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0363 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 5365 - 5281
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||| |||||||| || |||||||||| ||||| |||||||||||||||| |||| |||| ||| ||||| |||||||||||||| |
|
|
| T |
5365 |
agcagaggatggaggtgtctcgaggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttat |
5281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 1563 - 1483
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgc |
92 |
Q |
| |
|
||||||||||||| ||||| || |||| ||||| ||||||||||||| |||||||||||| || |||||||||||||||| |
|
|
| T |
1563 |
agcataggatggaggtttcccggggtgccaacctagttgggatgtcggtgttgcctcttgatgcttgtcctctctccttgc |
1483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 8667165 - 8667082
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||| ||||||||||||||||||||| || |||||| ||||||||||||||| |
|
|
| T |
8667165 |
gcataggatggaggtttctcggggtc-caacctagttaggatgtcgatgttgcctcttgatgcctgtccactctccttgcttatc |
8667082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 20380282 - 20380199
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| |||||| || ||||| ||| |||||| |||||||||| ||||| ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
20380282 |
gcataagatggaggtctctcggggtttcaacctagttgggatgccgatgatgcctcttgatgtctgttctctctccttgcttat |
20380199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 7190084 - 7190168
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||||||| || || |||||||||| ||||| |||||||||||||||| ||||||||| |||||||| | |||||||||||| |
|
|
| T |
7190084 |
gcataggattgaggtctctcgaggtgccaacctagttgggatgtcgatgatgcctcttgatgtctgtctacgttccttgcttatc |
7190168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 39406885 - 39406801
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||| |||||| | ||||||||||||||||| || || ||||| |||||||| |||| |
|
|
| T |
39406885 |
gcataggatggaggtttctcggggtgccaacctagttggtaagtcgatgttgcctcttgatgcctatcctcactccttgcgtatc |
39406801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 44673743 - 44673659
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| ||| || |||| ||||| |||||||||||||||||||||||||| ||||| ||| |||||||||||||| |
|
|
| T |
44673743 |
gcataggatggagattttgcggggtgccaacctagttgggatgtcgatgttgcctcttgatgtctatccattctccttgcttatc |
44673659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 18234252 - 18234334
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||| ||||||||| || ||| | || |||||||||||||||||||| |
|
|
| T |
18234252 |
gcataggatggaggtatctcggggtgccaacctagttggaatgtcgatgatgactcctcatgcctgtcctctctccttgctta |
18234334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 33040642 - 33040584
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttg |
71 |
Q |
| |
|
||||| |||||| |||||||| |||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
33040642 |
gcatatgatggaggtttctcggggtgccaacctagttgggatgtcgatgttgtctcttg |
33040584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 18117480 - 18117432
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatg |
61 |
Q |
| |
|
|||||||||||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
18117480 |
gcataggatggacgcctctcgaggtgtcaacctagttgggatgtcgatg |
18117432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 1924722 - 1924639
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| | | ||||| ||| | ||| ||||||||| |||| |
|
|
| T |
1924722 |
gcataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatacatcttgatgtttttccactctccttgattat |
1924639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 31434262 - 31434212
Alignment:
| Q |
46 |
agttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||| ||||||||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
31434262 |
agttaggatgtcgatgatgcctactgatgtctgtcctctctccttgcttat |
31434212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 34512092 - 34512146
Alignment:
| Q |
35 |
ggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctcct |
89 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||||||||| || |||||| ||||||| |
|
|
| T |
34512092 |
ggtgccaacctagttgggatgtcgatgatgcctcttgatgcctgtccactctcct |
34512146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 3007351 - 3007267
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| ||| ||||| |||||||||| ||||| | || ||| ||| ||||| ||||||||||||||| |
|
|
| T |
3007351 |
gcataggatggaggtgtctcggggtaccaacctagttgggatgacgatgataccgtttgatgtttgtccactctccttgcttatc |
3007267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 6192595 - 6192643
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatg |
61 |
Q |
| |
|
||||| |||||| || |||||||||| ||||| |||||||||||||||| |
|
|
| T |
6192595 |
gcataagatggaggtatctcgaggtgccaacctagttgggatgtcgatg |
6192643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 15441487 - 15441403
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || ||||| ||| || | |||||| ||||| ||| ||||| || ||||||||||||||||||||||||| |
|
|
| T |
15441487 |
gcataggatggaggtatctcggggtaccactctagttggaatgtcaatgatgcctactgatgtctgtcctctctccttgcttatc |
15441403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 36732 - 36657
Alignment:
| Q |
21 |
tggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||| |||||||||||| ||||| |||||||||||||||||||||||||| ||| ||| ||||||||||| |||| |
|
|
| T |
36732 |
tggaggtttctcgaggtaccaacctagttgggatgtcgatgttgcctcttgatgtatgtactctctccttgtttat |
36657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 3399619 - 3399536
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||| | |||||||| |||| ||||| |||||| | ||||||||||||| ||| ||||| |||||||||||||||||| |
|
|
| T |
3399619 |
gcataggatgaaggtttctcggggtgccaacctagttggtaagtcgatgttgccttttgatgtctatcctctctccttgcttat |
3399536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 14073799 - 14073881
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||| |||||| | ||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
14073799 |
gcataggatggaggtttctcagggtgccaacctagttggtaagtcgatgttgcctcttgatg-ctgtcctctctccttgcttat |
14073881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 14383827 - 14383909
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||| |||||| | ||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
14383827 |
gcataggatggaggtttctcagggtgccaacctagttggtaagtcgatgttgcctcttgatg-ctgtcctctctccttgcttat |
14383909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 1538026 - 1537958
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcc |
81 |
Q |
| |
|
|||||||||||| ||||| | ||||| ||||| ||||||||||||| |||| ||||||| ||||||||| |
|
|
| T |
1538026 |
gcataggatggaggtttccctaggtggcaacctagttgggatgtcggtgtttcctcttgatgtctgtcc |
1537958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9409144 - 9409088
Alignment:
| Q |
41 |
aaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| ||||||||| ||||||||| ||||| |
|
|
| T |
9409144 |
aacctagttaggatgtcgatgttgcctcttgatgtctgtccactctccttgtttatc |
9409088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 24573711 - 24573655
Alignment:
| Q |
40 |
caaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
24573711 |
caacctagttgggatgtcgatgttgcctcttgatatctgtccattctccttgcttat |
24573655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 1633314 - 1633393
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgc |
92 |
Q |
| |
|
||||||||| || |||||||| |||||||||| |||||| ||||| |||| ||||||| || |||||||||||||||| |
|
|
| T |
1633314 |
gcataggattgaggtttctcggggtgtcaacctagttggattgtcggtgtttcctcttgatgcatgtcctctctccttgc |
1633393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12163411 - 12163463
Alignment:
| Q |
19 |
gatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttg |
71 |
Q |
| |
|
|||||| ||||| ||||||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
12163411 |
gatggaggtttcccgaggtgccaacctagttgggatgtcggtgttgcctcttg |
12163463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 12727811 - 12727895
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
||||||||||| || ||||| | || ||||| |||||||||||||||| ||||||||| |||||||| | |||||||||||| |
|
|
| T |
12727811 |
gcataggatgggggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtctgtctacgttccttgcttatc |
12727895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 28780218 - 28780265
Alignment:
| Q |
40 |
caaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctc |
87 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
28780218 |
caacctagttgggatgtcgatgttgcctcttgatgcatgtcctctctc |
28780265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 11295438 - 11295381
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctctt |
70 |
Q |
| |
|
||||||||| || |||||||| ||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
11295438 |
gcataggatagaggtttctcggagtgccaacctagtttggatgtcgatgttgcctctt |
11295381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 18270365 - 18270282
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||||||||||| || ||||| |||| |||| |||||||||||||||| || | ||| ||| ||||||||||||||| |||| |
|
|
| T |
18270365 |
agcataggatggaggtctctcggggtgccaacttagttgggatgtcgatgatgtc-attgatgtttgtcctctctccttgtttat |
18270282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 173877 - 173961
Alignment:
| Q |
12 |
agcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||| |||||| || ||||| |||| ||||| |||||||||||||||| || ||| || ||||||||||||| |||||||||| |
|
|
| T |
173877 |
agcataagatggaggtatctcggggtgccaacctagttgggatgtcgatgatgtctcctgatgtctgtcctctcgccttgcttat |
173961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0607 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0607
Description:
Target: scaffold0607; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 375 - 292
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| |||||||| |||| ||| | |||||| | ||||||||||||||||| || |||||||||| ||||||||| |
|
|
| T |
375 |
gcataggatggaggtttctcggggtgccaaactagttggtaagtcgatgttgcctcttgatgcatgtcctctcttcttgcttat |
292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0292 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0292
Description:
Target: scaffold0292; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 21246 - 21313
Alignment:
| Q |
29 |
tctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| |||| ||||| |||||||||||||||| ||||||||| || |||||| |||||||||||||| |
|
|
| T |
21246 |
tctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgcctgtccactctccttgcttat |
21313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0093 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0093
Description:
Target: scaffold0093; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 16034 - 16118
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||| ||||| || ||||| ||| ||||| |||||||||||||||| |||| |||| ||| ||||| ||||||||||||||| |
|
|
| T |
16034 |
gcatagcatggaggtgtctcggagtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttatc |
16118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0291
Description:
Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 21942 - 21875
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtc |
80 |
Q |
| |
|
|||||||||||| || ||||| | || ||||| |||||||||||||||| ||||||||| |||||||| |
|
|
| T |
21942 |
gcataggatggaggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtctgtc |
21875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 129431 - 129514
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| || |||||| ||| | ||| |||||| ||||||| |
|
|
| T |
129431 |
gcataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgactcttgatgtttttccactctccgtgcttat |
129514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 307248 - 307331
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| || |||||| ||| | ||| |||||| ||||||| |
|
|
| T |
307248 |
gcataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgactcttgatgtttttccactctccgtgcttat |
307331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0265
Description:
Target: scaffold0265; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 19636 - 19554
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||||||||||| || ||||| |||| ||||| |||||||||||||||| |||| |||| ||| | ||| | ||||||||||| |
|
|
| T |
19636 |
gcataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttttccacactccttgctta |
19554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 2304 - 2382
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttg |
91 |
Q |
| |
|
|||||||||||| | ||| || |||| ||||| ||||||||||||| |||| ||||||| || ||||||||||||||| |
|
|
| T |
2304 |
gcataggatggagggttcccggggtgccaacctagttgggatgtcggtgttccctcttgatgcttgtcctctctccttg |
2382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0196 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0196
Description:
Target: scaffold0196; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 787 - 856
Alignment:
| Q |
26 |
gtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgctta |
95 |
Q |
| |
|
|||| ||| |||| ||||| ||||||||||||| |||||||||||| |||||||| | |||| ||||||| |
|
|
| T |
787 |
gtttttcggggtgccaacctagttgggatgtcggtgttgcctcttgatgtctgtcatttctcgttgctta |
856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0238 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0238
Description:
Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 4449 - 4533
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| || |||||||||| ||||| |||||||||||| ||| | ||||||| || ||||| | |||||||||||| |
|
|
| T |
4449 |
gcataggatggaggtctctcgaggtgccaacctagttgggatgtcaatgatacctcttgatgcctgtctacgttccttgcttatc |
4533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0216 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0216
Description:
Target: scaffold0216; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 15126 - 15070
Alignment:
| Q |
40 |
caaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttat |
96 |
Q |
| |
|
||||| |||||||||||| || ||||||| |||||||||||||||||||||||| |
|
|
| T |
15126 |
caacctagttgggatgtcattgatgcctctgaatgtctgtcctctctccttgcttat |
15070 |
T |
|
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Target: scaffold0134 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 2491 - 2575
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||||| | ||||| |||| ||||| |||||||||||||| | || ||| || || |||||| |||||||||||||| |
|
|
| T |
2491 |
gcataggatggagatgtctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgcatgtcctttctccttgcttatc |
2575 |
T |
|
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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 63592 - 63676
Alignment:
| Q |
13 |
gcataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttgttgtctgtcctctctccttgcttatc |
97 |
Q |
| |
|
|||||||||| | || |||||||||| ||||| |||| | ||||||||| || | || | || ||||||||||||||| |||||| |
|
|
| T |
63592 |
gcataggatgtaggtctctcgaggtgccaacctagttagaatgtcgatgatgtcgctcgatgcctgtcctctctccttacttatc |
63676 |
T |
|
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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 123911 - 123855
Alignment:
| Q |
15 |
ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttg |
71 |
Q |
| |
|
|||||||||| || ||||| |||| ||||| |||||||||||||||| || |||||| |
|
|
| T |
123911 |
ataggatggaggtatctcggggtgccaacctagttgggatgtcgatgatgtctcttg |
123855 |
T |
|
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