View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14855_high_11 (Length: 315)

Name: NF14855_high_11
Description: NF14855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14855_high_11
NF14855_high_11
[»] chr2 (1 HSPs)
chr2 (13-297)||(36061857-36062145)


Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 36062145 - 36061857
Alignment:
Q  13 attatacttcagtaaatgtaagaacaattagttaaacattcttaagttcttcactttattaaccttaaagatgcatata----gtatttttatcatgtta 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  36062145 attatacttcagtaaatgtaagaacaattagttaaacattcttaagttcttcactttattaaccttaaagatgcatatatatagtatttttatcatgtta 36062046  T
Q  109 caactctgatatatttgataacagaaacagaaatacaagaacatgggttcaaagtagaacaaagatagttctcatgtgcttaaatatcaaggttttagat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36062045 caactctgatatatttgataacagaaacagaaatacaagaacatgggttcaaagtagaacaaagatagttctcatgtgcttaaatatcaaggttttagat 36061946  T
Q  209 tgagtttgcggtcatgttcacggttttgttgtaatctgtgattttactgagatttatagttaaataggcctcgattgcggccacattac 297  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36061945 tgaggttgcggtcatgttcacggttttgttgtaatctgtgattttactgagatttatagttaaataggcctcgattgcggccacattac 36061857  T

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