View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14855_low_14 (Length: 350)
Name: NF14855_low_14
Description: NF14855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14855_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 18 - 334
Target Start/End: Complemental strand, 45723147 - 45722831
Alignment:
| Q |
18 |
agattcagcaacttttccattgaaaataatgttatttcttaacaaccaagaaaaattaccctactttagcttgtttgcaccaaggtaatatgtggttgcg |
117 |
Q |
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| T |
45723147 |
agattcagcaacttttccattgaaaataatgttatttcttaacaaccaagaaaaatgaccctactttagcttgtttgcaccaaggtaatatgtggttgcg |
45723048 |
T |
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| Q |
118 |
attgtgtgttatgttggctcacaagcaaacggtgagtcatggaaaagaaaaggattgaggcagcattgctttatgatgcaacagatagagaaggtaactt |
217 |
Q |
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| T |
45723047 |
attgtgtgttatgttggctcacaagcaaacggtgagtcatggaaaagaaaaggattgaggcagcattgctttatgatgcaacagatagagaaggtaactt |
45722948 |
T |
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| Q |
218 |
tttagtaaataaagggaccacttacataggcatgggccggggcaacacatgatatttgtggtacggtccaagttcaacaaacaatgagtaaagtgtagat |
317 |
Q |
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| T |
45722947 |
tttagtaaataaagggaccacttacataggcatgggccggggcaacacatgatatttgtggtacggtccaagttcaacaaacaatgagtaaagtgtagat |
45722848 |
T |
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| Q |
318 |
tttatgttcaacttcat |
334 |
Q |
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||||||||||||||||| |
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| T |
45722847 |
tttatgttcaacttcat |
45722831 |
T |
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