View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14855_low_4 (Length: 546)
Name: NF14855_low_4
Description: NF14855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14855_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 467; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 1 - 532
Target Start/End: Original strand, 683579 - 684110
Alignment:
| Q |
1 |
atatctttagctggtcatagcatgggaagtgctttagctattttacttgcttatgatatttcagagctaggtttaaacnnnnnnnntgataaaaatgatg |
100 |
Q |
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| T |
683579 |
atatctttagctggtcatagcatgggaagtgctttagctattttacttgcttatgatatttcagagctaggtttaaacaaaaaaaatgacaaaaatgatg |
683678 |
T |
|
| Q |
101 |
ccagtgttacagttttttcatttggaggacctagggttggtaacttagagtttnnnnnnngatgtgaagagttaggtgtgaaagtgttgagaatatcaaa |
200 |
Q |
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| T |
683679 |
ctagtgttacagtattttcatttggaggaccaagggttggtaacttagagtttaaaaaaagatgtgaagagttaggtgtgaaagtgttgagaatatcaaa |
683778 |
T |
|
| Q |
201 |
tgttaatgatcctataacaaaactaccgggtgttgtattcaatgaaaattttagggttttgatgggtgggagatatgagtttccttggagttgttcttgt |
300 |
Q |
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| T |
683779 |
tgttaatgatcctataacaaaactaccgggtgttgtattcaatgaaaattttagggttttgatgggtgggagatatgagtttccttggagttgttcttgt |
683878 |
T |
|
| Q |
301 |
tatgcacatgttggtgttgaacttatgcttgatttcttcaatatgcaaaacccttcttgtgttcatgatttggatacttatattggtcttcttagatgcc |
400 |
Q |
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| T |
683879 |
tatgcacatgttggtgttgaacttatgcttgatttcttcaatatgcaaaacccttcttgtgttcatgatttggatacttatattggtcttcttagatgcc |
683978 |
T |
|
| Q |
401 |
ctaaaaagaagattgaagaagtgattcatagtcaaagtgatggtggtggagtcaactttttgttggagaaggcaaggatgtttctattgaaatcatcaat |
500 |
Q |
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| T |
683979 |
ctaaaaaaaagattgaagaagtgattcatagtcaaagtgatggtggtggagtcaactttttgttggagaaggcaaggatgtttctattgaaatcatcaat |
684078 |
T |
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| Q |
501 |
atcacaagtttttgcagctggaggtggtaact |
532 |
Q |
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| T |
684079 |
atcacaagtttttgcagctggaggtggtaact |
684110 |
T |
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