View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14856_low_4 (Length: 283)

Name: NF14856_low_4
Description: NF14856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14856_low_4
NF14856_low_4
[»] chr5 (45 HSPs)
chr5 (17-279)||(2590843-2591105)
chr5 (33-107)||(6624776-6624851)
chr5 (32-103)||(32675284-32675355)
chr5 (33-103)||(37932330-37932401)
chr5 (215-273)||(1281336-1281394)
chr5 (33-112)||(27721656-27721736)
chr5 (33-88)||(3445253-3445308)
chr5 (33-107)||(31708132-31708207)
chr5 (33-88)||(32200453-32200508)
chr5 (33-87)||(18589874-18589928)
chr5 (33-90)||(25604004-25604061)
chr5 (33-90)||(26409253-26409310)
chr5 (33-90)||(30971091-30971148)
chr5 (33-90)||(34702490-34702547)
chr5 (32-88)||(40541094-40541151)
chr5 (213-273)||(1319322-1319382)
chr5 (32-88)||(10704337-10704393)
chr5 (224-276)||(12551975-12552027)
chr5 (34-90)||(18391601-18391657)
chr5 (33-90)||(32339731-32339792)
chr5 (33-88)||(5485186-5485241)
chr5 (33-88)||(6489007-6489062)
chr5 (33-88)||(13864344-13864399)
chr5 (33-80)||(16133079-16133126)
chr5 (33-88)||(17210715-17210770)
chr5 (33-88)||(22522807-22522862)
chr5 (33-88)||(34436851-34436906)
chr5 (33-87)||(22297385-22297439)
chr5 (33-87)||(22619874-22619928)
chr5 (33-106)||(26376966-26377040)
chr5 (34-107)||(26655465-26655539)
chr5 (34-107)||(26927050-26927124)
chr5 (33-79)||(36321509-36321555)
chr5 (33-90)||(5107249-5107306)
chr5 (33-90)||(8544993-8545050)
chr5 (39-88)||(13409556-13409605)
chr5 (33-90)||(17242684-17242741)
chr5 (33-82)||(18278271-18278320)
chr5 (33-78)||(27174827-27174872)
chr5 (33-90)||(28207132-28207189)
chr5 (33-82)||(31591549-31591598)
chr5 (33-88)||(4009866-4009922)
chr5 (34-90)||(16752506-16752562)
chr5 (32-88)||(18331706-18331762)
chr5 (34-90)||(43108570-43108626)
[»] chr8 (41 HSPs)
chr8 (153-279)||(41351153-41351279)
chr8 (33-90)||(27750908-27750965)
chr8 (33-107)||(19778065-19778140)
chr8 (32-90)||(30623292-30623350)
chr8 (33-103)||(1244695-1244766)
chr8 (33-88)||(27587221-27587276)
chr8 (30-112)||(32051513-32051596)
chr8 (33-103)||(42367729-42367800)
chr8 (34-87)||(15438454-15438507)
chr8 (34-87)||(15529758-15529811)
chr8 (33-82)||(44019549-44019598)
chr8 (34-90)||(9656001-9656057)
chr8 (32-88)||(40795376-40795432)
chr8 (36-87)||(444416-444467)
chr8 (34-112)||(12208716-12208795)
chr8 (34-112)||(12453144-12453223)
chr8 (33-80)||(17704013-17704060)
chr8 (33-88)||(19163542-19163597)
chr8 (33-80)||(27191758-27191805)
chr8 (33-72)||(32878661-32878700)
chr8 (33-88)||(33105391-33105446)
chr8 (33-88)||(39821884-39821939)
chr8 (36-90)||(7679905-7679959)
chr8 (30-72)||(8910003-8910045)
chr8 (33-79)||(33445570-33445616)
chr8 (33-82)||(11708986-11709035)
chr8 (33-90)||(12701001-12701058)
chr8 (43-88)||(18533679-18533724)
chr8 (33-90)||(19488300-19488357)
chr8 (33-90)||(26733950-26734007)
chr8 (32-81)||(30427730-30427779)
chr8 (39-84)||(40919369-40919414)
chr8 (39-88)||(42208475-42208524)
chr8 (32-88)||(7996939-7996995)
chr8 (30-90)||(11104761-11104821)
chr8 (30-90)||(13105091-13105151)
chr8 (33-112)||(22775628-22775708)
chr8 (32-88)||(24195248-24195304)
chr8 (32-88)||(24838176-24838232)
chr8 (32-72)||(27129081-27129121)
chr8 (38-90)||(38282843-38282895)
[»] chr2 (55 HSPs)
chr2 (33-107)||(24548011-24548086)
chr2 (33-107)||(24593376-24593451)
chr2 (33-107)||(15654856-15654930)
chr2 (33-90)||(12124545-12124602)
chr2 (27-88)||(20120727-20120788)
chr2 (32-88)||(23250326-23250382)
chr2 (33-88)||(20565081-20565136)
chr2 (33-107)||(28771582-28771657)
chr2 (33-111)||(42066712-42066791)
chr2 (32-90)||(4056789-4056847)
chr2 (36-90)||(12124687-12124741)
chr2 (34-103)||(34903518-34903588)
chr2 (32-81)||(4531410-4531459)
chr2 (33-90)||(20455891-20455948)
chr2 (33-90)||(35727437-35727494)
chr2 (32-103)||(2687365-2687436)
chr2 (33-107)||(7052773-7052849)
chr2 (33-81)||(7413202-7413250)
chr2 (32-107)||(27152352-27152428)
chr2 (33-88)||(35456826-35456882)
chr2 (33-107)||(9516995-9517070)
chr2 (33-88)||(10735837-10735892)
chr2 (33-80)||(19179064-19179111)
chr2 (33-103)||(24393245-24393316)
chr2 (39-90)||(25274833-25274884)
chr2 (33-107)||(27411092-27411167)
chr2 (33-88)||(29544627-29544682)
chr2 (33-88)||(29599939-29599994)
chr2 (33-88)||(30089049-30089104)
chr2 (33-88)||(30125653-30125708)
chr2 (33-88)||(31815893-31815948)
chr2 (33-88)||(35820307-35820362)
chr2 (33-107)||(37320503-37320578)
chr2 (226-273)||(42789007-42789054)
chr2 (32-90)||(5612956-5613014)
chr2 (33-79)||(18231488-18231534)
chr2 (34-107)||(35685047-35685121)
chr2 (33-87)||(39068715-39068769)
chr2 (34-80)||(40099397-40099443)
chr2 (33-90)||(2256971-2257028)
chr2 (33-90)||(10156017-10156074)
chr2 (33-90)||(13196700-13196757)
chr2 (33-101)||(23405199-23405268)
chr2 (33-90)||(25598566-25598623)
chr2 (33-90)||(27934861-27934918)
chr2 (33-90)||(33063986-33064043)
chr2 (33-81)||(40032880-40032929)
chr2 (35-107)||(42754047-42754120)
chr2 (37-90)||(43356546-43356599)
chr2 (46-90)||(6579285-6579329)
chr2 (32-88)||(8091164-8091220)
chr2 (34-90)||(16221350-16221406)
chr2 (33-77)||(32204544-32204588)
chr2 (34-90)||(41526780-41526836)
chr2 (32-72)||(44110949-44110989)
[»] chr1 (64 HSPs)
chr1 (33-111)||(38448848-38448927)
chr1 (165-229)||(27431277-27431341)
chr1 (33-107)||(5907799-5907874)
chr1 (33-103)||(17283951-17284022)
chr1 (33-107)||(47528433-47528508)
chr1 (33-88)||(17139523-17139578)
chr1 (33-88)||(19620576-19620631)
chr1 (33-107)||(21638113-21638188)
chr1 (36-90)||(21015965-21016019)
chr1 (33-107)||(21400010-21400084)
chr1 (33-106)||(37045133-37045207)
chr1 (226-280)||(37962864-37962918)
chr1 (36-90)||(39949815-39949869)
chr1 (36-90)||(50638920-50638974)
chr1 (226-280)||(51044467-51044521)
chr1 (32-88)||(19795122-19795179)
chr1 (33-90)||(30795701-30795758)
chr1 (33-90)||(42888575-42888632)
chr1 (33-81)||(15803250-15803298)
chr1 (213-273)||(16127398-16127458)
chr1 (36-88)||(29739340-29739392)
chr1 (34-90)||(31124648-31124704)
chr1 (32-88)||(34521196-34521252)
chr1 (32-84)||(41926821-41926873)
chr1 (33-88)||(8269374-8269429)
chr1 (33-103)||(9639807-9639878)
chr1 (33-103)||(10132434-10132505)
chr1 (33-88)||(25532973-25533028)
chr1 (33-107)||(35473952-35474027)
chr1 (33-88)||(41769821-41769876)
chr1 (33-88)||(46392233-46392288)
chr1 (33-90)||(5280631-5280688)
chr1 (33-79)||(8148380-8148426)
chr1 (32-90)||(15764031-15764089)
chr1 (33-79)||(17396708-17396754)
chr1 (30-88)||(32560970-32561028)
chr1 (32-90)||(34808567-34808625)
chr1 (33-79)||(48681948-48681994)
chr1 (33-90)||(9413798-9413855)
chr1 (33-90)||(10356187-10356244)
chr1 (32-93)||(12213992-12214053)
chr1 (35-88)||(12268990-12269043)
chr1 (33-90)||(17221524-17221581)
chr1 (33-90)||(27853355-27853412)
chr1 (33-90)||(30798751-30798808)
chr1 (33-90)||(35442855-35442912)
chr1 (33-90)||(41677594-41677651)
chr1 (33-90)||(45481493-45481550)
chr1 (33-90)||(48730643-48730700)
chr1 (33-90)||(51503679-51503736)
chr1 (33-85)||(3509950-3510002)
chr1 (32-72)||(5320873-5320912)
chr1 (34-90)||(8210389-8210445)
chr1 (213-273)||(16138908-16138968)
chr1 (32-80)||(28039874-28039922)
chr1 (32-80)||(28832185-28832233)
chr1 (34-90)||(29987116-29987172)
chr1 (33-77)||(34733400-34733444)
chr1 (31-79)||(35011391-35011439)
chr1 (34-90)||(40227830-40227886)
chr1 (28-88)||(44507936-44507996)
chr1 (33-81)||(45140019-45140067)
chr1 (36-88)||(46707875-46707927)
chr1 (33-81)||(49875612-49875660)
[»] chr4 (50 HSPs)
chr4 (30-107)||(14542746-14542824)
chr4 (34-93)||(46676499-46676558)
chr4 (32-90)||(3936626-3936684)
chr4 (39-90)||(1432862-1432913)
chr4 (33-88)||(7230280-7230335)
chr4 (29-88)||(20383484-20383543)
chr4 (33-107)||(20799380-20799455)
chr4 (33-90)||(38453265-38453322)
chr4 (33-90)||(49473645-49473702)
chr4 (34-90)||(6789430-6789486)
chr4 (32-103)||(19854564-19854636)
chr4 (33-88)||(35287513-35287568)
chr4 (34-88)||(11949769-11949823)
chr4 (32-90)||(19908691-19908749)
chr4 (33-87)||(42845025-42845079)
chr4 (36-90)||(49308823-49308877)
chr4 (33-90)||(10303515-10303572)
chr4 (33-90)||(18915050-18915107)
chr4 (33-90)||(24664995-24665052)
chr4 (33-90)||(24785466-24785523)
chr4 (33-90)||(24822743-24822800)
chr4 (33-101)||(33933737-33933806)
chr4 (33-90)||(42316828-42316885)
chr4 (226-279)||(43560553-43560606)
chr4 (33-90)||(56497612-56497669)
chr4 (34-90)||(4727133-4727189)
chr4 (32-88)||(19479483-19479539)
chr4 (33-107)||(6474439-6474514)
chr4 (33-107)||(7371534-7371609)
chr4 (33-88)||(9946427-9946482)
chr4 (33-88)||(12322673-12322728)
chr4 (33-112)||(21449880-21449959)
chr4 (33-107)||(23304002-23304077)
chr4 (33-88)||(29908056-29908111)
chr4 (61-107)||(34833992-34834039)
chr4 (33-88)||(50362145-50362200)
chr4 (34-88)||(675919-675973)
chr4 (32-90)||(20131426-20131484)
chr4 (38-88)||(56551598-56551648)
chr4 (37-90)||(7190452-7190505)
chr4 (33-90)||(25978318-25978374)
chr4 (32-81)||(31780744-31780793)
chr4 (32-81)||(34247439-34247488)
chr4 (33-82)||(36203236-36203285)
chr4 (33-82)||(40070980-40071029)
chr4 (33-90)||(48955292-48955349)
chr4 (33-90)||(51890800-51890857)
chr4 (33-69)||(16996462-16996498)
chr4 (34-90)||(23775519-23775575)
chr4 (32-88)||(28435254-28435310)
[»] chr7 (44 HSPs)
chr7 (33-104)||(46987086-46987158)
chr7 (33-107)||(7872734-7872809)
chr7 (32-91)||(37864424-37864483)
chr7 (33-88)||(39280824-39280879)
chr7 (226-276)||(45676085-45676135)
chr7 (33-90)||(2391007-2391064)
chr7 (33-90)||(2618679-2618736)
chr7 (36-112)||(18714451-18714528)
chr7 (33-90)||(41029272-41029329)
chr7 (32-88)||(5579692-5579748)
chr7 (33-88)||(7670434-7670489)
chr7 (33-88)||(10244727-10244782)
chr7 (33-107)||(20103440-20103515)
chr7 (32-82)||(8615022-8615072)
chr7 (40-90)||(29237561-29237611)
chr7 (34-88)||(42753533-42753587)
chr7 (31-107)||(6384849-6384926)
chr7 (33-90)||(21050226-21050283)
chr7 (32-85)||(25888899-25888952)
chr7 (33-107)||(20243255-20243331)
chr7 (32-88)||(30296332-30296388)
chr7 (32-88)||(43539110-43539166)
chr7 (33-80)||(5458085-5458132)
chr7 (33-88)||(19416514-19416569)
chr7 (33-103)||(22690026-22690097)
chr7 (33-88)||(27462442-27462497)
chr7 (33-88)||(27544957-27545012)
chr7 (33-80)||(30033814-30033861)
chr7 (33-71)||(20131844-20131882)
chr7 (32-90)||(24991780-24991838)
chr7 (32-90)||(36931975-36932033)
chr7 (30-88)||(37230034-37230092)
chr7 (36-90)||(44410601-44410655)
chr7 (32-77)||(4398325-4398370)
chr7 (33-82)||(5352329-5352378)
chr7 (33-90)||(9522912-9522969)
chr7 (33-90)||(38553818-38553875)
chr7 (33-86)||(39801706-39801759)
chr7 (33-90)||(48527190-48527247)
chr7 (32-107)||(23069843-23069919)
chr7 (40-88)||(27833407-27833455)
chr7 (34-90)||(33610929-33610985)
chr7 (38-90)||(38820979-38821031)
chr7 (34-90)||(39043756-39043812)
[»] chr3 (57 HSPs)
chr3 (30-107)||(13800664-13800742)
chr3 (34-90)||(14160282-14160338)
chr3 (33-103)||(1149059-1149130)
chr3 (33-106)||(53207970-53208044)
chr3 (34-107)||(25505688-25505761)
chr3 (34-90)||(52119377-52119433)
chr3 (33-107)||(4216386-4216460)
chr3 (33-88)||(4332673-4332728)
chr3 (33-88)||(48315030-48315085)
chr3 (33-103)||(5702169-5702238)
chr3 (32-90)||(21513287-21513345)
chr3 (32-90)||(23147982-23148040)
chr3 (40-90)||(39822176-39822226)
chr3 (32-90)||(53996298-53996356)
chr3 (33-90)||(7938724-7938781)
chr3 (33-90)||(8113566-8113623)
chr3 (33-90)||(28244108-28244165)
chr3 (34-103)||(28266717-28266786)
chr3 (33-90)||(32629080-32629137)
chr3 (37-90)||(35191821-35191874)
chr3 (32-112)||(38573554-38573635)
chr3 (33-90)||(44579636-44579693)
chr3 (33-90)||(46469277-46469333)
chr3 (36-88)||(10926472-10926524)
chr3 (30-90)||(13042804-13042864)
chr3 (30-90)||(13050881-13050941)
chr3 (32-88)||(38130965-38131021)
chr3 (38-90)||(38869522-38869574)
chr3 (36-88)||(45431951-45432003)
chr3 (33-72)||(7868722-7868761)
chr3 (33-88)||(25340930-25340985)
chr3 (33-80)||(43490431-43490478)
chr3 (33-88)||(47099041-47099096)
chr3 (33-79)||(16980369-16980415)
chr3 (32-90)||(19468450-19468508)
chr3 (34-103)||(20671833-20671903)
chr3 (36-90)||(52575950-52576004)
chr3 (33-90)||(17588362-17588419)
chr3 (33-90)||(19939045-19939102)
chr3 (33-90)||(21331421-21331478)
chr3 (33-90)||(22486683-22486740)
chr3 (33-90)||(23653226-23653283)
chr3 (33-90)||(24303393-24303450)
chr3 (33-90)||(53633621-53633678)
chr3 (33-101)||(53681869-53681938)
chr3 (36-88)||(977947-977999)
chr3 (33-81)||(18870738-18870786)
chr3 (34-90)||(21914075-21914131)
chr3 (32-88)||(25441506-25441562)
chr3 (30-90)||(32776211-32776271)
chr3 (213-273)||(33695351-33695411)
chr3 (38-90)||(35492798-35492850)
chr3 (36-88)||(35863819-35863871)
chr3 (34-90)||(39869811-39869867)
chr3 (25-88)||(47377355-47377419)
chr3 (32-88)||(48849769-48849824)
chr3 (34-90)||(54230103-54230159)
[»] scaffold0026 (1 HSPs)
scaffold0026 (32-90)||(75324-75382)
[»] chr6 (27 HSPs)
chr6 (32-90)||(12808868-12808926)
chr6 (33-90)||(9111047-9111104)
chr6 (30-90)||(21936037-21936097)
chr6 (32-103)||(18254092-18254163)
chr6 (32-90)||(655753-655811)
chr6 (33-101)||(492905-492974)
chr6 (33-90)||(4450262-4450319)
chr6 (33-90)||(30960057-30960114)
chr6 (29-77)||(26522468-26522516)
chr6 (36-80)||(32149141-32149185)
chr6 (33-84)||(18256883-18256934)
chr6 (33-88)||(20744138-20744193)
chr6 (33-88)||(32193865-32193920)
chr6 (33-88)||(33824881-33824936)
chr6 (33-84)||(33938689-33938740)
chr6 (33-87)||(9333731-9333785)
chr6 (34-88)||(15155736-15155790)
chr6 (33-90)||(17829312-17829369)
chr6 (33-90)||(20568295-20568352)
chr6 (38-90)||(2726421-2726473)
chr6 (33-77)||(10118917-10118961)
chr6 (38-90)||(12276235-12276287)
chr6 (32-80)||(12700435-12700483)
chr6 (32-88)||(15187062-15187118)
chr6 (32-88)||(15473488-15473544)
chr6 (34-90)||(21847195-21847251)
chr6 (36-88)||(31971532-31971584)
[»] scaffold0040 (1 HSPs)
scaffold0040 (33-90)||(53781-53838)
[»] scaffold0238 (1 HSPs)
scaffold0238 (33-112)||(25389-25469)
[»] scaffold0098 (1 HSPs)
scaffold0098 (33-77)||(5425-5469)
[»] scaffold0044 (1 HSPs)
scaffold0044 (32-88)||(42340-42396)
[»] scaffold0735 (1 HSPs)
scaffold0735 (33-90)||(1528-1585)
[»] scaffold0154 (1 HSPs)
scaffold0154 (33-90)||(37535-37592)
[»] scaffold0126 (1 HSPs)
scaffold0126 (33-90)||(34892-34949)
[»] scaffold0072 (1 HSPs)
scaffold0072 (34-72)||(25696-25734)
[»] scaffold0008 (2 HSPs)
scaffold0008 (215-277)||(262034-262096)
scaffold0008 (213-277)||(237152-237216)
[»] scaffold1127 (1 HSPs)
scaffold1127 (35-88)||(1171-1224)
[»] scaffold0117 (1 HSPs)
scaffold0117 (33-90)||(18293-18350)


Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 17 - 279
Target Start/End: Complemental strand, 2591105 - 2590843
Alignment:
Q  17 agataggtagtgtcatgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccaccaaagaaagctag 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||    
T  2591105 agataggtagtgtcatgtgagcttagctcagttggcaagaacagtgcataatatatgcaagatccggggttcgaccctgaacaccaccaaaaaaagctag 2591006  T
Q  117 ctaggtagtgtgattcaaaatagtacaaattaactaacctgttaccaacaaccccatgaaggcttataattaacttctcctcctcaggtgtaaaccttcc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2591005 ctaggtagtgtgattcaaaatagtacaaattaactaacctgttaccaacaaccccatgaaggcttataattaacttctcctcctcaggtgtaaaccttcc 2590906  T
Q  217 tcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccacacctttg 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2590905 tcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccacacctttg 2590843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 6624776 - 6624851
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||| |||| || ||||||||||    
T  6624776 gtgagcttagctcagttggcatggacaatgcataatatatgcaaggtccggggttcgaaccccggccaccaccaaa 6624851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 32675355 - 32675284
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccac 103  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||||||  ||||||||  | |||||||||    
T  32675355 tgtgagcttagttcagttggcaagaacaatgcataatatatgcaaggtctagggttcgaatccggacaccac 32675284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 37932330 - 37932401
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||||||||||| ||||||| ||||||    
T  37932330 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccctggccaccac 37932401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 1281394 - 1281336
Alignment:
Q  215 cctcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccaca 273  Q
    |||||| |||||||||| |||||||||||| ||||||| |||||||||||||| |||||    
T  1281394 cctcttttaatatcaggacttaaataatttgtccatcttaacctacaactctttccaca 1281336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 27721736 - 27721656
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga-ccctggacaccaccaaagaaag 112  Q
    ||||||||||||||||||| | ||||| |||||||||||| ||| ||| ||||||| | ||||||||||||| ||| ||||    
T  27721736 gtgagcttagctcagttggtaggaacaatgcataatatatgcaaagtctggggttcaacccctggacaccacaaaaaaaag 27721656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 3445308 - 3445253
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| ||| ||| |||||||| ||| |||||||||||||||    
T  3445308 gtgagcttagctcagttggtaaggacaatgcataatgtatgcaaggtccggggttc 3445253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 31708207 - 31708132
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccct-ggacaccaccaaa 107  Q
    |||||| | |||||||||| | ||||| |||||||||||| ||||||| ||||||||| ||| |||||||||||||    
T  31708207 gtgagcattgctcagttggtatgaacaatgcataatatatgcaaggtctggggttcgaacctcggacaccaccaaa 31708132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 32200508 - 32200453
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||| || | ||| |||||||||||| |||||||||||||||    
T  32200508 gtgagcttagctcagttgacagggacaatgcataatatatgcaaggtccggggttc 32200453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 18589928 - 18589874
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    ||||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||    
T  18589928 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccggggtt 18589874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 25604061 - 25604004
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||  | | |||||||||||||||| |||||| ||||||||||    
T  25604061 gtgagcttagctcagttgatatggacagtgcataatatatgcaaggttcggggttcga 25604004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 26409253 - 26409310
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| | | ||| ||||||||||||  ||||||||||||||||    
T  26409253 gtgagcttagctcagttggtatggacaatgcataatatatgtaaggtccggggttcga 26409310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 30971148 - 30971091
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| || ||||| |||||||| ||||||| |||| ||||||||||||    
T  30971148 gtgagcttagctcaattagcaaggacagtgcacaatatatgcaagatccggggttcga 30971091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 34702490 - 34702547
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||| ||| ||||||||||||  ||||||||||||||||    
T  34702490 gtgagcttaactcagttggtaaggacaatgcataatatatgaaaggtccggggttcga 34702547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 40541094 - 40541151
Alignment:
Q  32 tgtgagcttagctcagttggcaag-aacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||| ||| |||| |||||||||||| ||| |||||||||||    
T  40541094 tgtgagcttagctcagttggtaaggaacaatgcataatatatgcaaagtccggggttc 40541151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 1319322 - 1319382
Alignment:
Q  213 ttcctcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccaca 273  Q
    |||||||||||||||||||||||| ||||||  ||||||| |  ||||||||||| |||||    
T  1319322 ttcctcttctaatatcaggccttagataattattccatctaagtctacaactctttccaca 1319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 10704393 - 10704337
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||    
T  10704393 tgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttc 10704337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 12552027 - 12551975
Alignment:
Q  224 atatcaggccttaaataatttatccatctcaacctacaactcttaccacacct 276  Q
    ||||||||||| ||||||||| |||| || |||||||||||||| ||||||||    
T  12552027 atatcaggcctcaaataatttgtccaccttaacctacaactcttcccacacct 12551975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 18391601 - 18391657
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||| ||| ||| ||||||| |||| ||||||||| |||||||    
T  18391601 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtccgaggttcga 18391657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 32339731 - 32339792
Alignment:
Q  33 gtgagcttagctcagttggcaag----aacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| |||    |||| |||||||||||| |||||||||||||||||    
T  32339731 gtgagcttagctcagttggtaaggaagaacaatgcataatatatgcaaggtccggggttcga 32339792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 5485186 - 5485241
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| ||| |||||||||||    
T  5485186 gtgagcttagctcagttggtagggacaatgcataatatatgcaatgtccggggttc 5485241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 6489007 - 6489062
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| ||||||| |||||||    
T  6489007 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttc 6489062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 13864344 - 13864399
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||| ||||||||| | ||||| | |||||||||| |||||||||||||||    
T  13864344 gtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttc 13864399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 16133126 - 16133079
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  16133126 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 16133079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 17210770 - 17210715
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | |||||||||||||||| ||||||  |||||||    
T  17210770 gtgagcttagctcagttggtagggacagtgcataatatatgcaaggtgtggggttc 17210715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 22522862 - 22522807
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||| ||||| | | ||| |||||||||||| |||||||||||||||    
T  22522862 gtgagcttagctcggttggtatggacaatgcataatatatgcaaggtccggggttc 22522807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 34436851 - 34436906
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| ||||| |||||||||    
T  34436851 gtgagcttagctcagttggtagggacaatgcataatatatgcaagggccggggttc 34436906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 22297385 - 22297439
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    |||| |||||||||||||| ||||||| | |||||||||| ||||||| ||||||    
T  22297385 gtgaccttagctcagttggtaagaacaatacataatatatgcaaggtctggggtt 22297439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 22619874 - 22619928
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    ||||||||||||||||||| | ||||| ||||||| |||| |||| |||||||||    
T  22619874 gtgagcttagctcagttggtatgaacaatgcataaaatatacaagatccggggtt 22619928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 26376966 - 26377040
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaa 106  Q
    |||| |||||||||||||| ||| ||| |||||| ||||| ||| |||||||||||| || | ||||||||||||    
T  26376966 gtgaacttagctcagttggtaaggacaatgcatattatatgcaacgtccggggttcgaactccggacaccaccaa 26377040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 26655465 - 26655539
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||| ||||||||||| | | ||| ||||||||||||  ||||||||||||||| |||| || ||||||||||    
T  26655465 tgagctcagctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccggccaccaccaaa 26655539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 26927050 - 26927124
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||| ||||||||||| | | ||| ||||||||||||  ||||||||||||||| |||| || ||||||||||    
T  26927050 tgagctcagctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccggccaccaccaaa 26927124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 36321555 - 36321509
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||||    
T  36321555 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 36321509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 5107306 - 5107249
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| | ||| | |||||||||||| ||||||||| |||||||    
T  5107306 gtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcga 5107249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 8545050 - 8544993
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||  ||| ||| |||||||||||| |||||||||| ||||||    
T  8545050 gtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccggagttcga 8544993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 13409556 - 13409605
Alignment:
Q  39 ttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||  ||||||| |||||||||||| |||||||||| ||||    
T  13409556 ttagctcagttgataagaacaatgcataatatatacaaggtccggagttc 13409605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 17242741 - 17242684
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||| |||||||||||||||| | | |||||| ||||| ||||||||| |||||||    
T  17242741 gtgagcatagctcagttggcaaggataatgcatagtatatgcaaggtccgcggttcga 17242684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 18278320 - 18278271
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    ||||| ||| ||||||||| ||||||| |||||||||||| |||||||||    
T  18278320 gtgagtttaactcagttggtaagaacaatgcataatatatgcaaggtccg 18278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 27174827 - 27174872
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaagg 78  Q
    ||||||||||||||||||||||| ||| ||||||| |||| |||||    
T  27174827 gtgagcttagctcagttggcaaggacaatgcataaaatatacaagg 27174872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 28207132 - 28207189
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| | | ||| ||||||| |||| ||||||||| |||||||    
T  28207132 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccgaggttcga 28207189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 31591598 - 31591549
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    ||||||||||||||||||| | ||||| |||||| ||||| |||||||||    
T  31591598 gtgagcttagctcagttggtaggaacaatgcatattatatgcaaggtccg 31591549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 4009866 - 4009922
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgca-taatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| ||| ||| |||| |||||||| ||||| |||||||||    
T  4009866 gtgagcttagctcagttggtaaggacaatgcattaatatatgcaagggccggggttc 4009922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 16752562 - 16752506
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| |||||||| ||| ||| |||||||||||| |||| | ||||||||||    
T  16752562 tgagcttagttcagttggtaaggacaatgcataatatatgcaagattcggggttcga 16752506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 18331706 - 18331762
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||| |||| | | ||| ||||||| |||| |||||||||||||||    
T  18331706 tgtgagcttagctcacttggtatggacaatgcataaaatatgcaaggtccggggttc 18331762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 43108570 - 43108626
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||| ||||||||| ||| ||| |||||||||||| |||||| | ||||||||    
T  43108570 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggttcagggttcga 43108626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 279
Target Start/End: Original strand, 41351153 - 41351279
Alignment:
Q  153 acctgttaccaacaaccccatgaaggcttataattaacttctcctcctcaggtgtaaaccttcctcttctaatatcaggccttaaataatttatccatct 252  Q
    ||||||| |||||||| |  |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  41351153 acctgttgccaacaacactgtgaaggctaataattaacttctcctcatcaggtgtaaaccttcctcttctaatatcaggtctcaaataatttatccatct 41351252  T
Q  253 caacctacaactcttaccacacctttg 279  Q
     || | |||||||||||||||||||||    
T  41351253 taatcgacaactcttaccacacctttg 41351279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 27750965 - 27750908
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  27750965 gtgagcttagctcagttggtaaggacagtgcataatatatgcaaggtccggggttcga 27750908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 19778065 - 19778140
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  19778065 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatcctagacaccaccaaa 19778140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 30623292 - 30623350
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||    
T  30623292 tgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctggggttcga 30623350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 1244766 - 1244695
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    |||| |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||| |||| |||||||||    
T  1244766 gtgaacttagctcagttggtaaggacaatgcataatatatacaaggtctggggttcgaaccccggacaccac 1244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 27587221 - 27587276
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| ||| ||| ||||| |||||| |||||||||||||||    
T  27587221 gtgagcttagctcagttggtaaggacaatgcatgatatatgcaaggtccggggttc 27587276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 32051596 - 32051513
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc-gaccctggacaccaccaaagaaag 112  Q
    ||||||||||||||||||||||   | ||| |||||||||||| |||||||||||||||  |||| || |||||||||| ||||    
T  32051596 catgtgagcttagctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaaataaag 32051513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 42367729 - 42367800
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    ||||||||||||||||||  ||||||| ||||||||||||  || |||||| ||||| ||||||||||||||    
T  42367729 gtgagcttagctcagttgataagaacaatgcataatatatgaaaagtccggagttcgaaccctggacaccac 42367800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 15438454 - 15438507
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    ||||||||||||| |||| ||| ||| |||||||||||| ||||||||||||||    
T  15438454 tgagcttagctcacttggtaaggacaatgcataatatatgcaaggtccggggtt 15438507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 15529758 - 15529811
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    ||||||||||||| |||| ||| ||| |||||||||||| ||||||||||||||    
T  15529758 tgagcttagctcacttggtaaggacaatgcataatatatgcaaggtccggggtt 15529811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 44019549 - 44019598
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    |||| |||||||||||||| ||||||| |||||||||||| |||||||||    
T  44019549 gtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccg 44019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 9656057 - 9656001
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||| ||| ||| ||||||| |||| ||||||||| |||||||    
T  9656057 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtccgaggttcga 9656001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 40795376 - 40795432
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||| ||||||||| | ||||| | |||||||||| |||||||||||||||    
T  40795376 tgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttc 40795432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 444416 - 444467
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    ||||||||||| |||| ||| ||| |||||||||||| ||||||||||||||    
T  444416 agcttagctcaattggtaaggacaatgcataatatatgcaaggtccggggtt 444467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 12208716 - 12208795
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaagaaag 112  Q
    |||||||||||| ||||| ||| ||| || ||||||||||||| ||  |||||||| | |||||||||||||||| ||||    
T  12208716 tgagcttagctcggttggtaaggacaatgtataatatatccaatgtttggggttcgaatcctggacaccaccaaaaaaag 12208795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 12453144 - 12453223
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaagaaag 112  Q
    |||||||||||| ||||| ||| ||| || ||||||||||||| ||  |||||||| | |||||||||||||||| ||||    
T  12453144 tgagcttagctcggttggtaaggacaatgtataatatatccaatgtttggggttcgaatcctggacaccaccaaaaaaag 12453223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 17704013 - 17704060
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  17704013 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 17704060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 19163597 - 19163542
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||| ||| |||||||||||||||    
T  19163597 gtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggggttc 19163542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 27191758 - 27191805
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||||||||||| ||||||| | |||||||||| |||||||    
T  27191758 gtgagcttagctcagttggtaagaacaattcataatatatgcaaggtc 27191805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 32878661 - 32878700
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatat 72  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  32878661 gtgagcttagctcagttggtaagaacaatgcataatatat 32878700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 33105391 - 33105446
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||| |||   ||||| |||||||||||| |||||||||||||||    
T  33105391 gtgagcttagctcagctggtttgaacaatgcataatatatgcaaggtccggggttc 33105446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 39821884 - 39821939
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| ||||||| |||||||    
T  39821884 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttc 39821939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 7679905 - 7679959
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||| ||||||||||||  ||| |||||||||||| |||||| ||||||||||    
T  7679905 agcttaactcagttggcaaagacaatgcataatatatgcaaggttcggggttcga 7679959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 8910045 - 8910003
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatat 72  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||    
T  8910045 catgtgagcttagctcagttggtaaggacaatgcataatatat 8910003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 33445570 - 33445616
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    ||||||||||||||||||| | ||||| |||||||||||| ||||||    
T  33445570 gtgagcttagctcagttggtaggaacaatgcataatatatacaaggt 33445616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 11708986 - 11709035
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||||    
T  11708986 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccg 11709035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 12701058 - 12701001
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| |||| || |||| |||||||||||| ||| ||||| |||||||    
T  12701058 gtgagcttagctcaattggtaataacaatgcataatatatgcaaagtccgaggttcga 12701001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 18533679 - 18533724
Alignment:
Q  43 ctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||| ||||||| |||||||||||| |||| ||||||||||    
T  18533679 ctcagttggtaagaacaatgcataatatatgcaagatccggggttc 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 19488300 - 19488357
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||| |||||||||||| ||| ||| |||||||||||| ||||||| |||| ||||    
T  19488300 gtgagcatagctcagttggtaaggacaatgcataatatatacaaggtctggggctcga 19488357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 26734007 - 26733950
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||| ||||||| | ||||||||||| |||| |||||||| ||||||||    
T  26734007 gtgagcttacctcggttggcagggacagtgcataaaatatgcaaggtccagggttcga 26733950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 30427730 - 30427779
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    |||||||||||||||||||| | | ||| |||||||||||| ||||||||    
T  30427730 tgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtcc 30427779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 40919414 - 40919369
Alignment:
Q  39 ttagctcagttggcaagaacagtgcataatatatccaaggtccggg 84  Q
    ||||||||||||| | ||||| |||||||||||| |||||||||||    
T  40919414 ttagctcagttggtaggaacaatgcataatatatgcaaggtccggg 40919369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 42208524 - 42208475
Alignment:
Q  39 ttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||| ||| ||| |||||||||||| ||||||||| |||||    
T  42208524 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttc 42208475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 7996939 - 7996995
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||| | | |||  ||||||||||| ||||||| |||||||    
T  7996939 tgtgagcttagctcagttggtatggacaacgcataatatatgcaaggtctggggttc 7996995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 11104761 - 11104821
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| ||||||| ||||||||| | ||||| |||||||||||| |||||| |||| |||||    
T  11104761 catgcgagcttaactcagttggtaggaacaatgcataatatatacaaggttcgggattcga 11104821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 13105091 - 13105151
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||| ||| ||||||||| | | ||| |||||||||||| ||||| |||||||||||    
T  13105091 catgtgagattaactcagttggtagggacaatgcataatatatgcaagggccggggttcga 13105151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 22775628 - 22775708
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc-gaccctggacaccaccaaagaaag 112  Q
    |||||||||||| ||||||   | ||| |||||||| ||| |||||||||||||||  ||||||| |||||||||| ||||    
T  22775628 gtgagcttagcttagttggtttggacaatgcataatttatgcaaggtccggggttcaaaccctggccaccaccaaaaaaag 22775708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 24195248 - 24195304
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||| |||||||||||||  | ||||| | |||||||||| |||||||||||||||    
T  24195248 tgtgaacttagctcagttgatatgaacaatacataatatatgcaaggtccggggttc 24195304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 24838232 - 24838176
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||| ||||||||||||  || ||| ||||||| |||| |||||||||||||||    
T  24838232 tgtgagcatagctcagttggttaggacaatgcataaaatatgcaaggtccggggttc 24838176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 27129081 - 27129121
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatat 72  Q
    |||||||||| ||||||||| ||||||| ||||||||||||    
T  27129081 tgtgagcttacctcagttggtaagaacattgcataatatat 27129121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 38282895 - 38282843
Alignment:
Q  38 cttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| ||| ||| |||||| ||||| ||||||||| |||||||    
T  38282895 cttagctcagttggtaaggacaatgcatagtatatacaaggtccgaggttcga 38282843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 24548011 - 24548086
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||| ||| ||| | |||||||||| |||||||||||||||| ||||||||||||||||||    
T  24548011 gtgagcttagctcagttggtaaggacaatccataatatattcaaggtccggggttcgaaccctggacaccaccaaa 24548086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 24593376 - 24593451
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||| |||||| |||||||||||    
T  24593376 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccctgaacaccaccaaa 24593451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 15654930 - 15654856
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccaccaaa 107  Q
    ||||||||||||||||||| ||| | | ||||||| |||| ||||||| ||||||||| || |||||||||||||    
T  15654930 gtgagcttagctcagttggtaaggataatgcataaaatatgcaaggtctggggttcgaacccggacaccaccaaa 15654856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 12124545 - 12124602
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| ||||||||||||| ||| ||| |||||||||||| |||||||||||||||||    
T  12124545 gtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcga 12124602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 20120788 - 20120727
Alignment:
Q  27 tgtcatgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||| |||||||||||||||||||| ||| ||| |||||||||||| |||||| ||||||||    
T  20120788 tgtcttgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttc 20120727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 23250382 - 23250326
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||| ||||||||| ||||||| |||||||||||| |||||||| ||||||    
T  23250382 tgtgagcttaactcagttggtaagaacaatgcataatatatgcaaggtccagggttc 23250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 20565136 - 20565081
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  20565136 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttc 20565081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 28771582 - 28771657
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||| ||||||||||||| ||| ||| |||||||||||| |||| |||| |||||| |||| |||||||||||||    
T  28771582 gtgagtttagctcagttggtaaggacaatgcataatatatgcaagatccgcggttcgaaccccggacaccaccaaa 28771657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 42066712 - 42066791
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccct-ggacaccaccaaagaaa 111  Q
    ||||||||||||||||||| | | ||| |||| ||||||| |||||||||||||| || ||| || ||||||||||||||    
T  42066712 gtgagcttagctcagttggtatggacaatgcacaatatatgcaaggtccggggtttgaacctcggccaccaccaaagaaa 42066791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 4056789 - 4056847
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| ||||| ||| ||| |||||||||||| |||||||||| ||||||    
T  4056789 tgtgagcttagctcggttggtaaggacaatgcataatatatgcaaggtccggagttcga 4056847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 12124687 - 12124741
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||||||| ||||||    
T  12124687 agcttagctcagttggtaaggacaatgcataatatatgcaaggtccggagttcga 12124741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 34903518 - 34903588
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    ||||||||| |||||||| ||| |||||||||||||||| ||||||| | |||||| |||| |||||||||    
T  34903518 tgagcttagttcagttggtaaggacagtgcataatatatgcaaggtctgaggttcgaaccccggacaccac 34903588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 4531410 - 4531459
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    |||||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  4531410 tgtgagcttatctcaattggcaagaacaatgcataatatatgcaaggtcc 4531459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 20455891 - 20455948
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  20455891 gtgagcttagctcaattggtatggacaatgcataatatatgcaaggtccggggttcga 20455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 35727437 - 35727494
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||||||| |||||||||||| ||||||  |||||||||    
T  35727437 gtgagcttaactcagttggtaagaacaatgcataatatatgcaaggtttggggttcga 35727494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 2687436 - 2687365
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga-ccctggacaccac 103  Q
    |||||||||||||||||||| ||||||| ||||| |||||| ||| || |||| ||||| |||||||||||||    
T  2687436 tgtgagcttagctcagttggtaagaacaatgcattatatatgcaaagttcggg-ttcgaaccctggacaccac 2687365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 7052773 - 7052849
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataat-atatccaaggtccggggttc-gaccctggacaccaccaaa 107  Q
    ||||||||||||||||||| ||| ||| |||||||| |||| |||||||||||| ||  |||| |||||||||||||    
T  7052773 gtgagcttagctcagttggtaaggacaatgcataataatatgcaaggtccggggctcaaaccccggacaccaccaaa 7052849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 7413250 - 7413202
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  7413250 gtgagcttagctcagttggtaaggacaatgcataatatatacaaggtcc 7413202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 27152352 - 27152428
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||||||| ||||||||| | | | | |||||||||||| ||||||| |||||||| |||| |||||||||||||    
T  27152352 tgtgagcttaactcagttggtagggataatgcataatatatgcaaggtctggggttcgaacccaggacaccaccaaa 27152428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 35456882 - 35456826
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgca-taatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| ||||||| |||| |||||||| |||||| ||||||||    
T  35456882 gtgagcttagctcagttggtaagaacaatgcattaatatatgcaaggttcggggttc 35456826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 9517070 - 9516995
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccct-ggacaccaccaaa 107  Q
    ||||| ||||||||||||| | ||||| |||||||||||| |||| |||||| ||||| ||| || ||||||||||    
T  9517070 gtgagattagctcagttggtatgaacaatgcataatatatacaagatccgggtttcgaacctcggccaccaccaaa 9516995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 10735892 - 10735837
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||  |||||||||||| |||||||||||||||    
T  10735892 gtgagcttagctcagttggtagggacgatgcataatatatgcaaggtccggggttc 10735837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 19179111 - 19179064
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  19179111 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 19179064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 24393245 - 24393316
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    ||||||||||||||||||  ||| ||| |||||||||||| ||||||| | |||||| |||| |||||||||    
T  24393245 gtgagcttagctcagttgttaaggacaatgcataatatatgcaaggtctgaggttcgaaccccggacaccac 24393316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 25274884 - 25274833
Alignment:
Q  39 ttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||| ||||||| ||||||||||||  |||||| |||||||||    
T  25274884 ttagctcagttggtaagaacaatgcataatatatgtaaggtctggggttcga 25274833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 27411092 - 27411167
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||  | | ||  |||||||||||| |||||||||||||||| |||| || ||||||||||    
T  27411092 gtgagcttagctcagttgatatggaccttgcataatatatgcaaggtccggggttcgaaccccggccaccaccaaa 27411167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 29544627 - 29544682
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||| |||| | | ||| |||||||||||| |||||||||||||||    
T  29544627 gtgagcttagctcaattggtagggacaatgcataatatatgcaaggtccggggttc 29544682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 29599939 - 29599994
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||   | | | ||||||||||||||||||||||||||||    
T  29599939 gtgagcttagctcagttggtttggataatgcataatatatccaaggtccggggttc 29599994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 30089049 - 30089104
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||| |||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  30089049 gtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttc 30089104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 30125653 - 30125708
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||| |||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  30125653 gtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttc 30125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 31815948 - 31815893
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||| ||||||||| | | ||| |||||||||||| |||||||||||||||    
T  31815948 gtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttc 31815893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 35820362 - 35820307
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| ||||||||| || |||||||||||||||    
T  35820362 gtgagcttagctcagttggtagggacaatgcataatacatgcaaggtccggggttc 35820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 37320578 - 37320503
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||| ||||||||| ||  ||| |||||||||||| |||||| || |||||| ||| ||||||||||||||    
T  37320578 gtgagcttaactcagttggtaaagacaatgcataatatatgcaaggttcgaggttcgaaccatggacaccaccaaa 37320503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 42789007 - 42789054
Alignment:
Q  226 atcaggccttaaataatttatccatctcaacctacaactcttaccaca 273  Q
    |||||| |||||||||||||||||||||||||| ||||| || |||||    
T  42789007 atcaggtcttaaataatttatccatctcaacctgcaactttttccaca 42789054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 5612956 - 5613014
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||||| | | | |||||| ||||| ||||| |||||||||||    
T  5612956 tgtgagcttagctcagttggcagggatattgcatattatatgcaagggccggggttcga 5613014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 18231534 - 18231488
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||||    
T  18231534 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 18231488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 35685121 - 35685047
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||| ||||||||||||| ||| ||| |||||||||||| |||||||  ||||||| ||  ||||||||||||||    
T  35685121 tgagtttagctcagttggtaaggacaatgcataatatatgcaaggtctagggttcgaactttggacaccaccaaa 35685047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 39068769 - 39068715
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    ||||||||||||||||||  ||| ||| |||||||||||| |||| |||||||||    
T  39068769 gtgagcttagctcagttgataaggacaatgcataatatatgcaagatccggggtt 39068715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 40099443 - 40099397
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    |||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  40099443 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc 40099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 2256971 - 2257028
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| | | ||| |||||||||||| ||||||| |||||||||    
T  2256971 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctggggttcga 2257028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 10156017 - 10156074
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| | |||||||||| |||||| ||| ||||||    
T  10156017 gtgagcttagctcagttggtaaggacaatacataatatatgcaaggttcggtgttcga 10156074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 13196700 - 13196757
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| |||| ||||||||| | ||||| |||||||||||| |||||| ||||||||||    
T  13196700 gtgaacttaactcagttggtatgaacaatgcataatatatgcaaggttcggggttcga 13196757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 23405199 - 23405268
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacacc 101  Q
    ||||||||||||||||||| | | ||| |||||||||||| || ||  ||||||||| ||||||||||||    
T  23405199 gtgagcttagctcagttggtagggacattgcataatatatgcaggggtcggggttcgaaccctggacacc 23405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 25598623 - 25598566
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| |||||||||||||| | | ||| |||||||||||| |||||||| ||||||||    
T  25598623 gtgaacttagctcagttggtatggacaatgcataatatatgcaaggtccagggttcga 25598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 27934918 - 27934861
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| | |||||||||| |||| || |||||||||    
T  27934918 gtgagcttagctcagttggtaaggacaatacataatatatacaagatctggggttcga 27934861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 33063986 - 33064043
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||  | | ||| |||||||||||| |||||||||| ||||||    
T  33063986 gtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcga 33064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 40032929 - 40032880
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgca-taatatatccaaggtcc 81  Q
    ||||||||||||||||||| ||| |||||||| |||||||| ||||||||    
T  40032929 gtgagcttagctcagttggtaaggacagtgcattaatatatgcaaggtcc 40032880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 42754047 - 42754120
Alignment:
Q  35 gagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga-ccctggacaccaccaaa 107  Q
    |||||||| | |||||| | |||||| ||||||||||| ||||||||| ||||||| ||| || ||||||||||    
T  42754047 gagcttagattagttggtatgaacagcgcataatatatgcaaggtccgaggttcgatccccggccaccaccaaa 42754120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 43356599 - 43356546
Alignment:
Q  37 gcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| || ||||| |||||||| |||||||||||| ||||||||| |||||||    
T  43356599 gcttaacttagttgacaagaacaatgcataatatatgcaaggtccgaggttcga 43356546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 6579329 - 6579285
Alignment:
Q  46 agttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||| ||||||| |||||||||||| ||||||| |||||||||    
T  6579329 agttggtaagaacaatgcataatatatgcaaggtctggggttcga 6579285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 8091220 - 8091164
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||| |||||| || | | ||| |||||||||||| |||||||||||||||    
T  8091220 tgtgagcttatctcagtaggtatggacaatgcataatatatgcaaggtccggggttc 8091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 16221406 - 16221350
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| ||||||||||||| | ||||| ||||||| |||| |||||| ||||||||||    
T  16221406 tgagtttagctcagttggtatgaacaatgcataaaatatgcaaggttcggggttcga 16221350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 32204544 - 32204588
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaag 77  Q
    |||||||||||||| |||||| ||||| |||||||||||| ||||    
T  32204544 gtgagcttagctcaattggcatgaacaatgcataatatatgcaag 32204588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 41526836 - 41526780
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||| || | ||| |||||| ||||| ||||||| |||||||||    
T  41526836 tgagcttagctcagttgacatggacaatgcatagtatatgcaaggtctggggttcga 41526780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 44110949 - 44110989
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatat 72  Q
    |||||||||||||||||||| | |||||||||||| |||||    
T  44110949 tgtgagcttagctcagttggtaggaacagtgcatagtatat 44110989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 38448927 - 38448848
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaagaaa 111  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||| | || |||||||||||||||||    
T  38448927 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatcccggacaccaccaaagaaa 38448848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 27431277 - 27431341
Alignment:
Q  165 caaccccatgaaggcttataattaacttctcctcctcaggtgtaaaccttcctcttctaatatca 229  Q
    ||||| |||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  27431277 caaccacatgaaggttgataattaacttctcttcctcaggtgtaaaccttcatcttctaatatca 27431341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 5907799 - 5907874
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc-gaccctggacaccaccaaa 107  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||||| ||||||  |||| |||||||||||||    
T  5907799 gtgagcttagctcagttggcaaggacaatgcataatatatgcaaggtccagggttcaaaccccggacaccaccaaa 5907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 17283951 - 17284022
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||| ||||||||||||||    
T  17283951 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccctggacaccac 17284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 47528508 - 47528433
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||| ||| ||| |||||||||||  ||||||||| |||||| |||| |||||||||||||    
T  47528508 gtgagcttagctcagttggtaaggacaatgcataatatacgcaaggtccgaggttcgaaccccggacaccaccaaa 47528433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 17139578 - 17139523
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  17139578 gtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttc 17139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 19620576 - 19620631
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| ||| ||| | |||||||||| |||||||||||||||    
T  19620576 gtgagcttagctcagttggtaaggacaatacataatatatgcaaggtccggggttc 19620631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 21638113 - 21638188
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||||||||||| |||| | | ||| ||||| |||||| |||||||||||||||| |||| |||||||||||||    
T  21638113 gtgagcttagctcaattggtacggacaatgcatgatatatgcaaggtccggggttcgaaccccggacaccaccaaa 21638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 21015965 - 21016019
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||| ||||||| ||||||||||||  ||||| ||||||||||    
T  21015965 agcttagctcagttggtaagaacaatgcataatatatgtaaggttcggggttcga 21016019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 21400084 - 21400010
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccaccaaa 107  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||  |||||||| ||  ||||||||||||    
T  21400084 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtcttgggttcgaaccctgacaccaccaaa 21400010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 37045207 - 37045133
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaa 106  Q
    ||||||| ||||||||||| | ||||| |||||||||||| |||||||| ||||||| ||||  |||||||||||    
T  37045207 gtgagctcagctcagttggtaggaacaatgcataatatatgcaaggtccagggttcgaaccccagacaccaccaa 37045133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 37962918 - 37962864
Alignment:
Q  226 atcaggccttaaataatttatccatctcaacctacaactcttaccacacctttgc 280  Q
    ||||||||| || |||||||||||||| ||||| |||||||| ||||||||||||    
T  37962918 atcaggcctcaagtaatttatccatcttaacctgcaactcttcccacacctttgc 37962864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 39949815 - 39949869
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||    
T  39949815 agcttaactcagttggtaagaacaatgcataatatatacaaggtctggggttcga 39949869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 50638974 - 50638920
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||    
T  50638974 agcttagctcagttggtaaggacaatgcataatatatgcaaggtccagggttcga 50638920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 51044521 - 51044467
Alignment:
Q  226 atcaggccttaaataatttatccatctcaacctacaactcttaccacacctttgc 280  Q
    ||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||    
T  51044521 atcaggcctcaaatagtttatccatctcaatctacagctctttccacacctttgc 51044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 19795179 - 19795122
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgca-taatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||| ||||||  |||| |||||||| |||||||||||||||    
T  19795179 tgtgagcttagctcagttggtaagaaccttgcattaatatatgcaaggtccggggttc 19795122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 30795701 - 30795758
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| |||||||||||||| ||||||| |||||||||||| ||||||||  |||||||    
T  30795701 gtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccaaggttcga 30795758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 42888575 - 42888632
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||||    
T  42888575 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcga 42888632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 15803298 - 15803250
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||    
T  15803298 gtgagcttagttcagttggcaaggacaatgcataatatatgcaaggtcc 15803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 16127398 - 16127458
Alignment:
Q  213 ttcctcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccaca 273  Q
    |||||||  |||||||||  ||||||||||| ||||||||||| ||||||||||| |||||    
T  16127398 ttcctctcttaatatcagttcttaaataattaatccatctcaatctacaactctttccaca 16127458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 29739340 - 29739392
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||| ||| ||| ||||||| |||| |||||||||||||||    
T  29739340 agcttagctcagttggtaaggacaatgcataaaatatgcaaggtccggggttc 29739392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 31124704 - 31124648
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||||| ||| |||||||| ||| || || |||||||||||    
T  31124704 tgagcttagctcagttggcaaggacattgcataatttatgcaggggccggggttcga 31124648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 34521252 - 34521196
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||| ||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  34521252 tgtgagtttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 34521196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 41926821 - 41926873
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggg 84  Q
    |||||||||||||||||||| ||| ||| ||||||||||||  ||||||||||    
T  41926821 tgtgagcttagctcagttggtaaggacaatgcataatatatgtaaggtccggg 41926873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 8269429 - 8269374
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||| |||||||||||||| ||| ||| | |||||||||| |||||||||||||||    
T  8269429 gtgaacttagctcagttggtaaggacaatacataatatatgcaaggtccggggttc 8269374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 9639878 - 9639807
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccct-ggacaccac 103  Q
    ||||||||| |||| |||| ||| ||| |||||||||||| |||||||||| |||||| ||| |||||||||    
T  9639878 gtgagcttaactcacttggtaaggacaatgcataatatatgcaaggtccggagttcgaacctcggacaccac 9639807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 10132505 - 10132434
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    |||| ||||| |||||||| ||| ||| |||||||||||| ||||||| |||||||| ||| ||||||||||    
T  10132505 gtgaacttagatcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 10132434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 25532973 - 25533028
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||| |||||||| | | ||| |||||||||||| |||||||||||||||    
T  25532973 gtgagcttagttcagttggtatggacaatgcataatatatgcaaggtccggggttc 25533028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 35473952 - 35474027
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||||||||||| |||| ||| | | |||||||||||| |||||| | ||||||| |||| |||||||||||||    
T  35473952 gtgagcttagctcaattggtaaggataatgcataatatatgcaaggttcagggttcgaaccccggacaccaccaaa 35474027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 41769876 - 41769821
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||   | | | ||||||||||||||||||||||||||||    
T  41769876 gtgagcttagctcagttggtttggataatgcataatatatccaaggtccggggttc 41769821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 46392233 - 46392288
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||| |||||||||  | | | ||||||||||||||||||||||||||||    
T  46392233 gtgagcttagttcagttggcttggataatgcataatatatccaaggtccggggttc 46392288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 5280631 - 5280688
Alignment:
Q  33 gtgagcttagctcagttggcaaga-acagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| |||| |||||||||||||||| ||||||| |||||||||    
T  5280631 gtgagcttaactcagttgg-aagagacagtgcataatatatgcaaggtctggggttcga 5280688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 8148426 - 8148380
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    ||||||||||||||||||| ||||||| | |||||||||| ||||||    
T  8148426 gtgagcttagctcagttggtaagaacaatacataatatatgcaaggt 8148380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 15764031 - 15764089
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| |||| ||||||||| ||| ||| |||||||||||| ||||||| |||||||||    
T  15764031 tgtgaccttatctcagttggtaaggacaatgcataatatatacaaggtcaggggttcga 15764089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 17396708 - 17396754
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    |||||||||||||||||| |||| ||| |||||||||||| ||||||    
T  17396708 gtgagcttagctcagttgacaaggacaatgcataatatattcaaggt 17396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 32560970 - 32561028
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||| ||||||||| | | ||| || ||||||||| |||||||||||||||    
T  32560970 catgtgagcttatctcagttggtatggacaatgtataatatatgcaaggtccggggttc 32561028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 34808625 - 34808567
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||  ||| ||| |||||||||||| |||||| || |||||||    
T  34808625 tgtgagcttagctcagttgttaaggacaatgcataatatatgcaaggttcgaggttcga 34808567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 48681994 - 48681948
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    ||||||||||||||||||| | ||||| |||||||||||| ||||||    
T  48681994 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 48681948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 9413798 - 9413855
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| |||| |||||||| ||||||| ||||||||||||  ||||| ||||||||||    
T  9413798 gtgagtttagttcagttggtaagaacaatgcataatatatgtaaggttcggggttcga 9413855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 10356244 - 10356187
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| | | ||| |||||||||||| || ||||||||||||||    
T  10356244 gtgagcttaactcagttggtatggacaatgcataatatatgcacggtccggggttcga 10356187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 12213992 - 12214053
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccc 93  Q
    |||||||||||||||||||  | ||||| | |||||||||| ||||||| ||||||| ||||    
T  12213992 tgtgagcttagctcagttgataggaacaatacataatatatgcaaggtctggggttcaaccc 12214053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 12269043 - 12268990
Alignment:
Q  35 gagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||  |||||||| | ||||| |||||||||||| |||||||||||||||    
T  12269043 gagcttaagtcagttggtaggaacaatgcataatatatgcaaggtccggggttc 12268990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 17221581 - 17221524
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| ||| || |||||| ||||||| |||||||||||| ||||||||| |||||||    
T  17221581 gtgagtttaactaagttggtaagaacaatgcataatatatgcaaggtccgaggttcga 17221524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 27853355 - 27853412
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| | ||||| |||||||||||| |||| |||||| |||||    
T  27853355 gtgagcttaactcagttggtatgaacaatgcataatatatacaagatccgggattcga 27853412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 30798808 - 30798751
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| |||| |||||||| ||| ||||||||||||  ||| ||||||||||||    
T  30798808 gtgagcttaactcatttggcaaggacaatgcataatatatgtaagatccggggttcga 30798751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 35442855 - 35442912
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||| | ||||||||| | ||||| |||||||||||| ||||||||| |||||||    
T  35442855 gtgagctaaactcagttggtatgaacaatgcataatatattcaaggtccgaggttcga 35442912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 41677651 - 41677594
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| | ||||||||||  ||| ||||||||||||    
T  41677651 gtgagcttagctcagttggtaaggacaatacataatatatgtaagatccggggttcga 41677594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 45481493 - 45481550
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||  ||| |||| ||| ||| |||||||||||| |||||||||||||||||    
T  45481493 gtgagcttaattcatttggtaaggacaatgcataatatatgcaaggtccggggttcga 45481550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 48730700 - 48730643
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||| ||||||||||| ||| ||| ||||||||| || |||||||||||| ||||    
T  48730700 gtgagctcagctcagttggtaaggacaatgcataataaatgcaaggtccggggctcga 48730643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 51503679 - 51503736
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||| |||||||||||| | | ||| ||||||||||||||||||||  ||||||||    
T  51503679 gtgagcatagctcagttggtagggacaatgcataatatatccaaggtctagggttcga 51503736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 3510002 - 3509950
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccgggg 85  Q
    |||| |||||||||||||| | | ||| |||||||||||| ||||||||||||    
T  3510002 gtgaacttagctcagttggtatggacaatgcataatatatgcaaggtccgggg 3509950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 5320912 - 5320873
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatat 72  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  5320912 tgtgagcttagctcagttggtaagaaca-tgcataatatat 5320873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 8210445 - 8210389
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| | |||||| ||| ||| |||||||||||| |||||||| ||||||||    
T  8210445 tgagcttagtttagttggtaaggacaatgcataatatatacaaggtccagggttcga 8210389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 16138908 - 16138968
Alignment:
Q  213 ttcctcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccaca 273  Q
    |||||||  ||||||||||  ||||||| || ||||||||||| ||||||||||| |||||    
T  16138908 ttcctctcttaatatcaggttttaaatagttaatccatctcaatctacaactctttccaca 16138968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 28039922 - 28039874
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    |||||||||| ||||||||| ||| ||| |||||||||||| |||||||    
T  28039922 tgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtc 28039874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 28832233 - 28832185
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    |||||||||| ||||||||| | ||||| |||||||||||| |||||||    
T  28832233 tgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtc 28832185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 29987172 - 29987116
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| ||| ||||||||||||| ||| |||||||||||| ||||||| || ||||||    
T  29987172 tgagtttaactcagttggcaaggacaatgcataatatatgcaaggtctggagttcga 29987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 34733400 - 34733444
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaag 77  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||    
T  34733400 gtgagcttagctcagttggtaaggacaatgcataatatatgcaag 34733444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 35011391 - 35011439
Alignment:
Q  31 atgtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    ||||||||||||||| |||| |||| ||| |||||||||||| ||||||    
T  35011391 atgtgagcttagctcggttgacaaggacaatgcataatatatgcaaggt 35011439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 40227830 - 40227886
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||| | | ||| ||||||| |||| ||||||| |||||||||    
T  40227830 tgagcttagctcagttggtatggacaatgcataaaatatacaaggtctggggttcga 40227886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 44507996 - 44507936
Alignment:
Q  28 gtcatgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||| ||||||||||||||||||  || ||| || ||||||||| ||||||||| |||||    
T  44507996 gtcatctgagcttagctcagttggttaggacaatgtataatatatgcaaggtccgaggttc 44507936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 45140067 - 45140019
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    ||||||||||||||||||| | | ||| |||||||||||| ||||||||    
T  45140067 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtcc 45140019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 46707875 - 46707927
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||| ||||||| ||| ||| |||||||||||| |||| ||||||||||    
T  46707875 agcttagcccagttggtaaggacaatgcataatatatgcaagttccggggttc 46707927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 49875660 - 49875612
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| ||||||||    
T  49875660 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtcc 49875612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 14542824 - 14542746
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||| |||||||||| ||| |||||||||||| ||||||| |||||||| |||||| |||||||||||    
T  14542824 catgtgagcttagcttagttggcaaggacaatgcataatatatgcaaggtctggggttcgaaccctgaacaccaccaaa 14542746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 46676558 - 46676499
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccc 93  Q
    |||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  46676558 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaccc 46676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 3936626 - 3936684
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||    
T  3936626 tgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtccggggttcga 3936684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 1432862 - 1432913
Alignment:
Q  39 ttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||    
T  1432862 ttagctcagttggtaagaacagtgtataatatatgcaaggtccggggttcga 1432913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 7230280 - 7230335
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||    
T  7230280 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttc 7230335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 20383484 - 20383543
Alignment:
Q  29 tcatgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  20383484 tcatgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 20383543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 20799455 - 20799380
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc-gaccctggacaccaccaaa 107  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||||||||||  ||||||| ||||||||||    
T  20799455 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccctggtcaccaccaaa 20799380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 38453265 - 38453322
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||    
T  38453265 gtgagcttagctcagttggcatggacaatgcataatatatgcaaggtccagggttcga 38453322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 49473645 - 49473702
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||| ||||||| ||| ||| |||||||||||| |||||||||||||||||    
T  49473645 gtgagcttagcccagttggtaaggacaatgcataatatatgcaaggtccggggttcga 49473702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 6789486 - 6789430
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||||    
T  6789486 tgagcttagctcagttggtaaggacaatgcatagtatatgcaaggtccggggttcga 6789430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 19854564 - 19854636
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccct-ggacaccac 103  Q
    |||||||||||||||||||| | | ||| |||||||||||| |||| |||||||||||| ||| |||||||||    
T  19854564 tgtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggttcgaacctcggacaccac 19854636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 35287568 - 35287513
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | ||||| ||||||| |||| |||||||||||||||    
T  35287568 gtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggttc 35287513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 11949823 - 11949769
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  11949823 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 11949769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 19908691 - 19908749
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||| ||||||||| ||| ||| |||||||||||| ||||||||| |||||||    
T  19908691 tgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccgaggttcga 19908749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 42845025 - 42845079
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| ||||||||||||||    
T  42845025 gtgagcttaactcagttggaaaggacaatgcataatatatgcaaggtccggggtt 42845079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 49308823 - 49308877
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||| |||| ||| |||||||||||| ||||||| |||||||||    
T  49308823 agcttagctcagttgacaaggacaatgcataatatatgcaaggtctggggttcga 49308877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 10303572 - 10303515
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| ||||||| |||| |||| ||||||||||||    
T  10303572 gtgagcttagctcagttggtaaggacaatgcataaaatatgcaagatccggggttcga 10303515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 18915107 - 18915050
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| ||||||||||||| ||| ||| |||||||||||| || ||||||||||||||    
T  18915107 gtgagtttagctcagttggtaaggacaatgcataatatattcatggtccggggttcga 18915050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 24665052 - 24664995
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| | | | | |||||||||||| |||||||||||||||||    
T  24665052 gtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcga 24664995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 24785523 - 24785466
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||| ||||||||||| ||| ||| |||||||||||| ||||||| |||||||||    
T  24785523 gtgagctaagctcagttggtaaggacaatgcataatatatacaaggtctggggttcga 24785466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 24822743 - 24822800
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||| ||||||||||| ||| ||| |||||||||||| ||||||| |||||||||    
T  24822743 gtgagctaagctcagttggtaaggacaatgcataatatatacaaggtctggggttcga 24822800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 33933806 - 33933737
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga-ccctggacacc 101  Q
    ||||||||||||||||||| | | ||| |||||||||||| || || ||||||||||| |||||||||||    
T  33933806 gtgagcttagctcagttggtagggacattgcataatatatgcaggggccggggttcgacccctggacacc 33933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 42316885 - 42316828
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||  |||||||||||||||| ||||||||| |||||||    
T  42316885 gtgagcttaactcagttggtaaagacagtgcataatatatgcaaggtccgaggttcga 42316828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 43560553 - 43560606
Alignment:
Q  226 atcaggccttaaataatttatccatctcaacctacaactcttaccacacctttg 279  Q
    ||||||||| ||||| |||||||||||||| ||||||||||| ||||| |||||    
T  43560553 atcaggcctcaaatagtttatccatctcaatctacaactctttccacatctttg 43560606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 56497669 - 56497612
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| |||| ||| ||| |||||||||||| ||||||| |||||||||    
T  56497669 gtgagcttagctcaattggtaaggacaatgcataatatatgcaaggtctggggttcga 56497612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 4727189 - 4727133
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||| ||||||||||  |||||| |||||||||||| ||| |||||||||||||    
T  4727189 tgagcttcgctcagttggtgagaacaatgcataatatatacaaagtccggggttcga 4727133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 19479539 - 19479483
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||   | ||||| |||||||||||| |||||||||||||||    
T  19479539 tgtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttc 19479483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 6474439 - 6474514
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||||||||||||||| |||| ||| ||||| |||||  ||||||| |||||||| |||| |||||| ||||||    
T  6474439 gtgagcttagctcagttgacaaggacaatgcatcatataagcaaggtctggggttcgaaccccggacacaaccaaa 6474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 7371609 - 7371534
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||| ||||||||  ||| ||| | |||||||||| |||||||||||||||| |||| |||||||| ||||    
T  7371609 gtgagcttaactcagttgataaggacaatacataatatatgcaaggtccggggttcgaaccccggacaccaacaaa 7371534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 9946427 - 9946482
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||    
T  9946427 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttc 9946482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 12322673 - 12322728
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||| ||||||||||    
T  12322673 gtgagcttagctcagttggtacggacaatgcataatatatgcaagttccggggttc 12322728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 21449959 - 21449880
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccaccaaagaaag 112  Q
    |||||||||||||||| | || ||||| ||||| |||||| |||||||| |||||| | || || |||||||||| ||||    
T  21449959 gtgagcttagctcagtcgacaggaacaatgcatgatatatgcaaggtccagggttcaaacccggccaccaccaaaaaaag 21449880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 23304077 - 23304002
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||| | | |||  ||||||||||| ||||||||||||| || |||| || ||||||||||    
T  23304077 gtgagcttagctcagttggtagggacaaggcataatatatgcaaggtccggggtgcgaaccccggccaccaccaaa 23304002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 29908056 - 29908111
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| |||||||||| ||||    
T  29908056 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccggagttc 29908111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 34834039 - 34833992
Alignment:
Q  61 tgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||    
T  34834039 tgcataatatatgcaaggtccggggttcgaacactggacaccaccaaa 34833992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 50362200 - 50362145
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||| ||||||    
T  50362200 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccagggttc 50362145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 675919 - 675973
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||   | ||| |||||||||||| |||||||||||||||    
T  675919 tgagcttagctcagttggtttggacaatgcataatatatgcaaggtccggggttc 675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 20131426 - 20131484
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| |||| ||||||||||||| ||| |||||||||||| ||||  |||||||||||    
T  20131426 tgtgaacttaactcagttggcaaggacaatgcataatatatacaagacccggggttcga 20131484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 56551648 - 56551598
Alignment:
Q  38 cttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||||| |||||    
T  56551648 cttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttc 56551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 7190505 - 7190452
Alignment:
Q  37 gcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||| ||||||| ||||||||||||  || |||||| ||||||    
T  7190505 gcttagctcagttggtaagaacaatgcataatatatgtaacgtccggagttcga 7190452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 25978318 - 25978374
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||  ||| ||| |||||||||||| ||||||||| |||||||    
T  25978318 gtgagcttagctcagttgt-aaggacaatgcataatatatgcaaggtccgaggttcga 25978374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 31780744 - 31780793
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    |||||||||||||||||||| ||| ||| ||||||| |||| ||||||||    
T  31780744 tgtgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtcc 31780793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 34247439 - 34247488
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    |||||| ||||||||||||| ||| ||| |||||||||||| ||||||||    
T  34247439 tgtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtcc 34247488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 36203236 - 36203285
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    ||||||||||||||||||  ||| ||| |||||||||||| |||||||||    
T  36203236 gtgagcttagctcagttgataaggacaatgcataatatatgcaaggtccg 36203285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 40071029 - 40070980
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    ||||||||| ||||||||| | ||||| |||||||||||| |||||||||    
T  40071029 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccg 40070980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 48955292 - 48955349
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||| ||| ||| |||||||| ||| |||||||||||||    
T  48955292 gtgagcttatctcagttggtaaggacaatgcgtaatatatgcaaagtccggggttcga 48955349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 51890800 - 51890857
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||||| | ||| |||||||| ||| || || |||||||||||    
T  51890800 gtgagcttagctcagttggcagggacattgcataatttatgcaggggccggggttcga 51890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 16996462 - 16996498
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataata 69  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  16996462 gtgagcttagctcagttggtaagaacaatgcataata 16996498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 23775519 - 23775575
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||| ||||||| | | ||| |||||||||||| |||||||| ||||||||    
T  23775519 tgagcttagcacagttggtagggacaatgcataatatatgcaaggtccagggttcga 23775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 28435310 - 28435254
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||| ||||||||||||| | | ||| |||||||||||| |||||| ||||||||    
T  28435310 tgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttc 28435254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 46987086 - 46987158
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccacc 104  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||| |||| ||||||||||    
T  46987086 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccccggacaccacc 46987158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 7872809 - 7872734
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||| |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||| |||| |||||||||||||    
T  7872809 gtgaacttagctcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaacccaggacaccaccaaa 7872734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 37864424 - 37864483
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgac 91  Q
    |||||||||||||||||||| ||| ||| |||||||||||| ||||||| ||||||||||    
T  37864424 tgtgagcttagctcagttggtaagtacaatgcataatatatgcaaggtctggggttcgac 37864483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 39280879 - 39280824
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||| |||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  39280879 gtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccggggttc 39280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 45676085 - 45676135
Alignment:
Q  226 atcaggccttaaataatttatccatctcaacctacaactcttaccacacct 276  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  45676085 atcaggccttagataatttatccatctcaatctacaactcttcccacacct 45676135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 2391007 - 2391064
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| |||||||||||||| ||||||| |||||||||||| |||| ||||||||||||    
T  2391007 gtgaacttagctcagttggtaagaacaatgcataatatatacaagatccggggttcga 2391064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 2618679 - 2618736
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||| |||||||||| ||| ||| |||||||||||| |||||||||||||||||    
T  2618679 gtgagcttcgctcagttggtaaggacaatgcataatatatgcaaggtccggggttcga 2618736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 18714451 - 18714528
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc-gaccctggacaccaccaaagaaag 112  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||||||||||||  |||| | ||||||||||| ||||    
T  18714451 agcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaaccccgtacaccaccaaaaaaag 18714528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 41029272 - 41029329
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| || ||||||||| |||||||||||||||||    
T  41029272 gtgagcttagctcagttggtaaggacaatgtataatatatgcaaggtccggggttcga 41029329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 5579692 - 5579748
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||| | | |||||||||||||||| ||||||| |||||||    
T  5579692 tgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtctggggttc 5579748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 7670434 - 7670489
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||   ||||| |||||||||||| |||||||||||||||    
T  7670434 gtgagcttagctcagttggtttgaacaatgcataatatatgcaaggtccggggttc 7670489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 10244727 - 10244782
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  10244727 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 10244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 20103515 - 20103440
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||| ||||||||| ||| ||| |||||||||| | |||||||||||||||| ||||  ||||||||||||    
T  20103515 gtgagcttaactcagttggtaaggacaatgcataatatttacaaggtccggggttcgaaccccagacaccaccaaa 20103440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 8615022 - 8615072
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    |||||||||||||||||||| ||| ||| |||||||||||| |||||||||    
T  8615022 tgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccg 8615072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 29237611 - 29237561
Alignment:
Q  40 tagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||| ||||||| |||||||||||| |||||||| ||||||||    
T  29237611 tagctcagttggtaagaacaatgcataatatatgcaaggtccagggttcga 29237561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 42753587 - 42753533
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||| ||||||||||||| | | |||||||||||||||| |||||||||||||||    
T  42753587 tgagtttagctcagttggaagggacagtgcataatatatgcaaggtccggggttc 42753533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 6384849 - 6384926
Alignment:
Q  31 atgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||| |||||||   ||| ||| |||||||||||| ||||||| |||||||| ||||| ||||||||||||    
T  6384849 atgtgagcttaactcagttaataaggacaatgcataatatatgcaaggtctggggttcgaaccctagacaccaccaaa 6384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21050283 - 21050226
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||||| ||| |||||    
T  21050283 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctgggtttcga 21050226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 25888899 - 25888952
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccgggg 85  Q
    |||||||||||||||||||| ||| ||  |||||||||||| ||||||||||||    
T  25888899 tgtgagcttagctcagttggtaaggacgatgcataatatatgcaaggtccgggg 25888952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 20243255 - 20243331
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataat-atatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    ||||||||||||||||||| | | ||| |||||||| |||| |||||||||||||| | |||| |||||||||||||    
T  20243255 gtgagcttagctcagttggtatggacaatgcataataatatgcaaggtccggggtttgaaccccggacaccaccaaa 20243331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 30296332 - 30296388
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||| ||| ||| || ||||||||| ||||||| |||||||    
T  30296332 tgtgagcttagctcagttggtaaggacaatgtataatatatgcaaggtctggggttc 30296388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 43539166 - 43539110
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||  | ||||| ||||||||||||  ||||||||||||||    
T  43539166 tgtgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttc 43539110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 5458132 - 5458085
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||||||||||  ||||||| |||||||||||| |||||||    
T  5458132 gtgagcttagctcagttgataagaacaatgcataatatatgcaaggtc 5458085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 19416514 - 19416569
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||    
T  19416514 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttc 19416569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 22690097 - 22690026
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    ||||||||||||||||||  ||||| | |||||||||||| ||||||  |||||||| |||| |||||||||    
T  22690097 gtgagcttagctcagttgctaagaataatgcataatatatgcaaggtttggggttcgaaccccggacaccac 22690026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 27462497 - 27462442
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||| |||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  27462497 gtgagcatagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 27462442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 27544957 - 27545012
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||| ||||||||| ||| ||| || ||||||||| |||||||||||||||    
T  27544957 gtgagcttatctcagttggtaaggacaatgtataatatatgcaaggtccggggttc 27545012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 30033814 - 30033861
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||||||||||| ||||||| |||||||||| | |||||||    
T  30033814 gtgagcttagctcagttggtaagaacaatgcataatatttgcaaggtc 30033861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 20131844 - 20131882
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatata 71  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  20131844 gtgagcttagctcagttggcatgaacaatgcataatata 20131882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 24991780 - 24991838
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||| ||| ||| |||||||||||| |||| | |||| |||||    
T  24991780 tgtgagcttagctcagttggtaaggacaatgcataatatatgcaagatacgggattcga 24991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 36931975 - 36932033
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| |||||||||||||||| | ||| |||||||| ||| || ||||||||||||||    
T  36931975 tgtgaacttagctcagttggcagggacattgcataatttatgcagggtccggggttcga 36932033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 37230092 - 37230034
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||| ||||||||| ||| | | |||||||||||| ||||||| |||||||    
T  37230092 catgtgagcttaactcagttggtaaggaaaatgcataatatatgcaaggtctggggttc 37230034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 44410601 - 44410655
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||| |||||||||| | ||| || ||||||||| |||||||||||||||||    
T  44410601 agcttagttcagttggcatggacaatgtataatatatacaaggtccggggttcga 44410655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 4398325 - 4398370
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaag 77  Q
    |||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  4398325 tgtgagattagctcagttggtaagaacaatgcataatatatgcaag 4398370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 5352329 - 5352378
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccg 82  Q
    ||||||||||||||||||| ||| ||| | |||||||||| |||||||||    
T  5352329 gtgagcttagctcagttggtaaggacaatacataatatatacaaggtccg 5352378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 9522912 - 9522969
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| |||||||||||||| | ||||| |||||||||||| ||||||  |||||||||    
T  9522912 gtgaacttagctcagttggtatgaacaatgcataatatatgcaaggtttggggttcga 9522969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 38553818 - 38553875
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| |||||||||||||| ||||||| ||||||||||||  |||||  |||||||||    
T  38553818 gtgaacttagctcagttggtaagaacaatgcataatatatgtaaggtttggggttcga 38553875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 39801706 - 39801759
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggt 86  Q
    ||||||||||||||||||| | | ||| |||||||||||| |||| ||||||||    
T  39801706 gtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggt 39801759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 48527190 - 48527247
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||  ||| ||| |||||||||||| |||||||||| ||||||    
T  48527190 gtgagcttatctcagttgataaggacaatgcataatatatgcaaggtccggagttcga 48527247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 23069919 - 23069843
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||||||||||||||||| ||  |||   |||||||||| ||||||  |||||||| |||| |||||||||||||    
T  23069919 tgtgagcttagctcagttggtaaagacaacacataatatatgcaaggtatggggttcgaaccccggacaccaccaaa 23069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 27833455 - 27833407
Alignment:
Q  40 tagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||| ||| ||| ||||||||||||  ||||||||||||||    
T  27833455 tagctcagttggtaaggacaatgcataatatatgtaaggtccggggttc 27833407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 33610985 - 33610929
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||  | | ||| |||||||||||| |||||||||| ||||||    
T  33610985 tgagcttagctcagttgttacggacaatgcataatatatgcaaggtccggagttcga 33610929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 38820979 - 38821031
Alignment:
Q  38 cttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||  |||||||||||||||||  || || ||||||||||    
T  38820979 cttagctcagttggcagaaacagtgcataatatatttaatgttcggggttcga 38821031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 39043756 - 39043812
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||| ||||||||| | | ||| |||||||||||| | |||||||||||||||    
T  39043756 tgagcttaactcagttggtatggacaatgcataatatatgctaggtccggggttcga 39043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 13800664 - 13800742
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaa 107  Q
    |||||||||||||||||||||| ||||||| |||||||||||| ||||||||   ||||| |||| |||||||||||||    
T  13800664 catgtgagcttagctcagttggtaagaacaatgcataatatatgcaaggtccacagttcgaaccccggacaccaccaaa 13800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 14160338 - 14160282
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||| |||||||||||||| |||||||||||| ||| |||||||||||||    
T  14160338 tgagcttagcttagttggcaagaacaatgcataatatatgcaaagtccggggttcga 14160282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 1149130 - 1149059
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||  ||||||| ||||||||||||||    
T  1149130 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctagggttcgaaccctggacaccac 1149059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 53207970 - 53208044
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaa 106  Q
    ||||||||||||||||||| |||  || |||||||||||| ||||||| |||||||| ||||| |||||||||||    
T  53207970 gtgagcttagctcagttggtaagggcaatgcataatatatgcaaggtctggggttcgaacccttgacaccaccaa 53208044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 25505761 - 25505688
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccaccaaa 107  Q
    |||||||| ||||||| | ||| ||| |||||||||||| ||||||| ||||||||| || |||||||||||||    
T  25505761 tgagcttaactcagtttgtaaggacaatgcataatatatgcaaggtctggggttcgaacccggacaccaccaaa 25505688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 52119377 - 52119433
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||| ||| ||| |||||||||||| |||||| ||||||||||    
T  52119377 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcga 52119433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 4216460 - 4216386
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga-ccctggacaccaccaaa 107  Q
    |||| |||||||||||||  ||| ||| |||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  4216460 gtgaacttagctcagttgataaggacaatgcataatatatgcaaggtc-ggggttcgaaccctggacaccaccaaa 4216386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 4332728 - 4332673
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||   ||| | ||||||||||||||||||||||||||||    
T  4332728 gtgagcttagctcagttggtttgaataatgcataatatatccaaggtccggggttc 4332673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 48315085 - 48315030
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| ||| | | |||||||||||| |||||||||||||||    
T  48315085 gtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttc 48315030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 5702238 - 5702169
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccac 103  Q
    ||||||||||||||||||| |||| || |||||||||||| ||||||  | ||||||| ||||||||||||    
T  5702238 gtgagcttagctcagttggtaaga-caatgcataatatatgcaaggtttgaggttcgaacctggacaccac 5702169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 21513287 - 21513345
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||| ||| ||| |||||||| ||| ||||||| |||||||||    
T  21513287 tgtgagcttagctcagttggtaaggacaatgcataatttatgcaaggtctggggttcga 21513345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 23148040 - 23147982
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||| ||| ||| | |||||||||| | |||||||||||||||    
T  23148040 tgtgagcttagctcagttggtaaggacaatacataatatatgcgaggtccggggttcga 23147982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 39822226 - 39822176
Alignment:
Q  40 tagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||| ||| ||| |||||||||||| |||||||||||||||||    
T  39822226 tagctcagttggtaaggacaatgcataatatatacaaggtccggggttcga 39822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 53996298 - 53996356
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||| | | ||| |||||||||||| ||||||| |||||||||    
T  53996298 tgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcga 53996356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 7938724 - 7938781
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||| |||||||| | ||||| |||||||||||| ||||||| |||||||||    
T  7938724 gtgagcttagttcagttggtatgaacaatgcataatatatacaaggtctggggttcga 7938781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 8113623 - 8113566
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||| |||| |||||||    
T  8113623 gtgagcttagctcagttggtaaggacaatgcataatatatgcaagatccgcggttcga 8113566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 28244165 - 28244108
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| | ||||| ||||||| |||| |||||||||||||||||    
T  28244165 gtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggggttcga 28244108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 28266717 - 28266786
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccac 103  Q
    |||| |||| |||||||| ||| ||| |||||||||||| ||||||||||||||||  || |||||||||    
T  28266717 tgaggttagttcagttggtaaggacaatgcataatatatgcaaggtccggggttcgtacccggacaccac 28266786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 32629080 - 32629137
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||||    
T  32629080 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcga 32629137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 35191874 - 35191821
Alignment:
Q  37 gcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||    
T  35191874 gcttagctcagttggtaaggacaatgcataatatatgcaaggtctggggttcga 35191821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 38573635 - 38573554
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaagaaag 112  Q
    |||||||||| ||||||||  ||||||| |||||||||||| |||||||  || |||| |||| ||||||||||||| ||||    
T  38573635 tgtgagcttaactcagttgataagaacaatgcataatatatacaaggtctaggattcgaaccccggacaccaccaaaaaaag 38573554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 44579636 - 44579693
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||||    
T  44579636 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcga 44579693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 46469277 - 46469333
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||| ||||||||||    
T  46469277 gtgagcttagctcagttggtaaggacaatgcataatatattcaaggt-cggggttcga 46469333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 10926472 - 10926524
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||| ||||||||    
T  10926472 agcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttc 10926524  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 13042864 - 13042804
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||||| ||  ||| |  ||||||||| |||||||||||||||||    
T  13042864 catgtgagcttagctcagttggtaaagacaatttataatatatgcaaggtccggggttcga 13042804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 13050941 - 13050881
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||||| ||  ||| |  ||||||||| |||||||||||||||||    
T  13050941 catgtgagcttagctcagttggtaaagacaatttataatatatgcaaggtccggggttcga 13050881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 38131021 - 38130965
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||| ||||||||| | | ||| |||||||||||| |||||||||||||||    
T  38131021 tgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttc 38130965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 38869574 - 38869522
Alignment:
Q  38 cttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| ||||||| |||||||||||| |||| |||| |||||||    
T  38869574 cttagctcagttggtaagaacaatgcataatatatacaagatccgaggttcga 38869522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 45431951 - 45432003
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||| | | ||| |||||||||||| |||||||||||||||    
T  45431951 agcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttc 45432003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 7868722 - 7868761
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatat 72  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  7868722 gtgagcttagctcagttggtaagaacaatgcataatatat 7868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 25340985 - 25340930
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||    
T  25340985 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttc 25340930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43490478 - 43490431
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||||||||||| | ||||| |||||||||||| |||||||    
T  43490478 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtc 43490431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 47099096 - 47099041
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||  ||||| | |||||||||||| |||||| ||||||||    
T  47099096 gtgagcttagctcagttgataagaataatgcataatatatgcaaggttcggggttc 47099041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 16980415 - 16980369
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggt 79  Q
    ||||||||||||||||||| ||| ||| |||||||||||| ||||||    
T  16980415 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 16980369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 19468450 - 19468508
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||| ||||||||| | | ||| |||||||||||| ||||||||| |||||||    
T  19468450 tgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccgtggttcga 19468508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 20671903 - 20671833
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccac 103  Q
    |||||||||||||| ||| ||| ||| ||||||||| || || ||||||||||||| |||||| |||||||    
T  20671903 tgagcttagctcagatggtaaggacaatgcataatacatgcacggtccggggttcgaaccctgcacaccac 20671833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 52575950 - 52576004
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||| | ||||| ||||||| |||| ||||||| |||||||||    
T  52575950 agcttagctcagttggtatgaacaatgcataaaatatgcaaggtctggggttcga 52576004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 17588362 - 17588419
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| |||| || |||||||||    
T  17588362 gtgagcttaactcagttggtaaggacaatgcataatatatgcaagatctggggttcga 17588419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 19939102 - 19939045
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| ||| ||||||||| ||||||| ||||||||||||  |||||| |||||||||    
T  19939102 gtgagattaactcagttggtaagaacaatgcataatatatgaaaggtctggggttcga 19939045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21331478 - 21331421
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||  | | ||| |||||||||||| |||||| ||||||||||    
T  21331478 gtgagcttagctcagttgttatggacaatgcataatatatgcaaggttcggggttcga 21331421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 22486683 - 22486740
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||||||| |||||||||||| |||| |  |||||||||    
T  22486683 gtgagcttaactcagttggtaagaacaatgcataatatatgcaagatttggggttcga 22486740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 23653283 - 23653226
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||||||| |||||||||||| || ||  ||||||||||    
T  23653283 gtgagcttaactcagttggtaagaacattgcataatatatgcaggggtcggggttcga 23653226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 24303393 - 24303450
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||||| | ||| |||||||| ||| || || |||||||||||    
T  24303393 gtgagcttagctcagttggcagggacattgcataatttatgcaggggccggggttcga 24303450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 53633678 - 53633621
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||| | | ||||||||||||  ||||||||||||||||    
T  53633678 gtgagcttaactcagttggtaaggataatgcataatatatgtaaggtccggggttcga 53633621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 53681938 - 53681869
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacacc 101  Q
    ||||||||| ||||||||| ||||||| |||||||||||| |||| |  | |||||| ||||||||||||    
T  53681938 gtgagcttacctcagttggtaagaacaatgcataatatatgcaagatttgaggttcgaaccctggacacc 53681869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 977999 - 977947
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||| | | ||| |||||||||||| |||||||||| ||||    
T  977999 agcttagctcagttggtatggacaatgcataatatatgcaaggtccggagttc 977947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 18870786 - 18870738
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtcc 81  Q
    ||||||||||||||||||| | | ||| |||||||||||| ||||||||    
T  18870786 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtcc 18870738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 21914131 - 21914075
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||| ||||||||| ||| ||| |||||||||||| ||||||  |||||||||    
T  21914131 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggtatggggttcga 21914075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 25441562 - 25441506
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||| |||||||||||||| | | ||| |||||||||||| ||||||| |||||||    
T  25441562 tgtgaacttagctcagttggtatggacaatgcataatatatgcaaggtctggggttc 25441506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 32776211 - 32776271
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||||| | | ||| |||||||| ||| || || |||||||||||    
T  32776211 catgtgagcttagctcagttggtagggacattgcataatttatgcaggggccggggttcga 32776271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 33695411 - 33695351
Alignment:
Q  213 ttcctcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccaca 273  Q
    |||||||  ||||||||||||||||||||||  |||| || | |||||||||||| |||||    
T  33695411 ttcctctcttaatatcaggccttaaataattggtccaccttagcctacaactctttccaca 33695351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 35492798 - 35492850
Alignment:
Q  38 cttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| ||||||| |||||||||||| ||| || || |||||||    
T  35492798 cttagctcagttggtaagaacaatgcataatatatgcaaagttcgaggttcga 35492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 35863871 - 35863819
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||| ||| ||| | |||||||||| ||||||| |||||||    
T  35863871 agcttagctcagttggtaaggacaatacataatatatgcaaggtctggggttc 35863819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 39869867 - 39869811
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| ||| ||||||||| ||| ||| |||||||||||| ||||||||| |||||||    
T  39869867 tgagtttaactcagttggtaaggacaatgcataatatatacaaggtccgaggttcga 39869811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 47377419 - 47377355
Alignment:
Q  25 agtgtcat-gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||| ||||||||| ||||||||| ||| ||| |||||||||||| |||||| || |||||    
T  47377419 agtgtcatcgtgagcttaactcagttggtaaggacaatgcataatatatacaaggttcgaggttc 47377355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 48849824 - 48849769
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||| ||||||||| | || || |||||||||||| |||||||||||||||    
T  48849824 tgtgagcttaactcagttggtatga-caatgcataatatatgcaaggtccggggttc 48849769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 54230159 - 54230103
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| ||||||||||||| ||| ||| |||||||||||| ||||||  |||||||||    
T  54230159 tgagtttagctcagttggtaaggacaatgcataatatatgcaaggtttggggttcga 54230103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 75324 - 75382
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||| ||||||||||| ||| ||| |||||||||||| |||||||||||||||||    
T  75324 tgtgagctaagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcga 75382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 12808868 - 12808926
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| | ||||||||||| |||||||||||| ||||||| |||||||||    
T  12808868 tgtgagcttagctctgatggcaagaacaatgcataatatatgcaaggtctggggttcga 12808926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 9111047 - 9111104
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||| |||||||| | ||||| |||||||||||| |||||||||||||||||    
T  9111047 gtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtccggggttcga 9111104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 21936097 - 21936037
Alignment:
Q  30 catgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||| ||||||||||||| ||||||| | |||||||||| |||||||||| ||||||    
T  21936097 catgtgagtttagctcagttggtaagaacaattcataatatatgcaaggtccggagttcga 21936037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 18254163 - 18254092
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcgaccctggacaccac 103  Q
    |||||||||||||||||||| ||| ||| ||||||||| || ||||||||||| ||||| ||  ||||||||    
T  18254163 tgtgagcttagctcagttggtaaggacaatgcataatacatgcaaggtccgggattcgaaccccgacaccac 18254092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 655811 - 655753
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||||| |   ||| |||||||||||| |||||||||||||||||    
T  655811 tgtgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcga 655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 492905 - 492974
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacacc 101  Q
    ||||||||||||||||||||||| | | |||||| ||||| || || |||||||||| ||||||||||||    
T  492905 gtgagcttagctcagttggcaaggatattgcatattatatgcaggggccggggttcgaaccctggacacc 492974  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 4450262 - 4450319
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||  ||  ||| |||||||||||| |||||||||||||||||    
T  4450262 gtgagcttagctcagttgataaagacaatgcataatatatgcaaggtccggggttcga 4450319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 30960114 - 30960057
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| |||||||| ||||||||    
T  30960114 gtgagcttagctcagttggtaaggacaatgcttaatatatgcaaggtccagggttcga 30960057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 26522468 - 26522516
Alignment:
Q  29 tcatgtgagcttagctcagttggcaagaacagtgcataatatatccaag 77  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| ||||    
T  26522468 tcatgtgagcttagctcagttggtaaggacaatgcataatatatacaag 26522516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 32149141 - 32149185
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||    
T  32149141 agcttagctcagttggtaagaacaatgcataatatatgcaaggtc 32149185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 18256883 - 18256934
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggg 84  Q
    ||||||||||||||||||  ||| ||| |||||||||||| |||||||||||    
T  18256883 gtgagcttagctcagttgataaggacaatgcataatatatgcaaggtccggg 18256934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 20744138 - 20744193
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||||||||||||||| | | ||| |||||||||||| ||||||| |||||||    
T  20744138 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttc 20744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 32193920 - 32193865
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||| ||||||||||||| ||||||| |||||||||||| |||||| || |||||    
T  32193920 gtgagtttagctcagttggtaagaacaatgcataatatatgcaaggtacgaggttc 32193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 33824881 - 33824936
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||| |||||||||||||  ||| ||| |||||||||||| |||||||||||||||    
T  33824881 gtgatcttagctcagttgataaggacaatgcataatatatgcaaggtccggggttc 33824936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 33938740 - 33938689
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggg 84  Q
    ||||||||||||||||||| | ||||| |||||||||||| |||||| ||||    
T  33938740 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggg 33938689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 9333731 - 9333785
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggtt 87  Q
    |||||||||||||| |||| ||| ||| ||||| |||||| ||||||||||||||    
T  9333731 gtgagcttagctcaattggtaaggacaatgcattatatatgcaaggtccggggtt 9333785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 15155736 - 15155790
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||| ||| ||| ||| |||||||||||| ||||||| |||||||    
T  15155736 tgagcttagctcagctggtaagtacaatgcataatatatgcaaggtctggggttc 15155790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 17829369 - 17829312
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||  |||||||||||| ||| ||||| |||||||    
T  17829369 gtgagcttagctcagttggtaaggactatgcataatatatgcaaagtccgaggttcga 17829312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 20568352 - 20568295
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| |||||||||||| || ||  ||||||||||    
T  20568352 gtgagcttagctcagttggtaaggacattgcataatatatgcaggggtcggggttcga 20568295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 2726473 - 2726421
Alignment:
Q  38 cttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||| ||||||||| | | ||| |||||||||||| |||||||||||||||||    
T  2726473 cttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcga 2726421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 10118917 - 10118961
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaag 77  Q
    ||||||||||||||||||| ||||||| | |||||||||| ||||    
T  10118917 gtgagcttagctcagttggtaagaacaatacataatatatgcaag 10118961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 12276287 - 12276235
Alignment:
Q  38 cttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||| ||||||| |||||||||||| ||| || |||| |||||    
T  12276287 cttagctcagttggtaagaacaatgcataatatatgcaaagttcgggattcga 12276235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12700483 - 12700435
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtc 80  Q
    ||||||||||| |||||||| | ||||| |||||||||||| |||||||    
T  12700483 tgtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtc 12700435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 15187062 - 15187118
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||| ||  ||| ||| |||||||||||| ||||||||| |||||    
T  15187062 tgtgagcttagctcagctgataagtacaatgcataatatatgcaaggtccgaggttc 15187118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 15473544 - 15473488
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||| ||  ||| ||| |||||||||||| ||||||||| |||||    
T  15473544 tgtgagcttagctcagctgataagtacaatgcataatatatgcaaggtccgaggttc 15473488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 21847195 - 21847251
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||||||||| | | ||| | |||||||||| |||||| ||||||||||    
T  21847195 tgagcttagctcagttggtagggacaatacataatatatgcaaggtacggggttcga 21847251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 31971532 - 31971584
Alignment:
Q  36 agcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||| ||||||||| ||| ||| |||||||||||| ||||||||| |||||    
T  31971532 agcttaactcagttggtaaggacaatgcataatatatgcaaggtccgaggttc 31971584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 53838 - 53781
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||| ||||||||||||| ||| ||||||||||||| || |||||||||||||||||    
T  53838 gtgagtttagctcagttggtaaggacagtgcataatacatgcaaggtccggggttcga 53781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 25389 - 25469
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcg-accctggacaccaccaaagaaag 112  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| |||||||| ||||||| ||||  |||||||||||| ||||    
T  25389 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccccagacaccaccaaaaaaag 25469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 5425 - 5469
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaag 77  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||    
T  5425 gtgagcttagctcagttggtaagaacaatgcataatatatccaag 5469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 42396 - 42340
Alignment:
Q  32 tgtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    |||||||||||||||||||| ||| ||| |||||||||||| ||||||| |||||||    
T  42396 tgtgagcttagctcagttgggaaggacaatgcataatatatgcaaggtctggggttc 42340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 1528 - 1585
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| | | ||| ||||||| |||| |||||||||||||||||    
T  1528 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcga 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 37535 - 37592
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    |||||||||||| |||||| | ||||| ||||||| |||| |||||||||||||||||    
T  37535 gtgagcttagctaagttggtatgaacaatgcataaaatatgcaaggtccggggttcga 37592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 34949 - 34892
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| |||||||| ||||||||    
T  34949 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccagggttcga 34892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 25696 - 25734
Alignment:
Q  34 tgagcttagctcagttggcaagaacagtgcataatatat 72  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  25696 tgagcttagctcagttggtaagaacaatgcataatatat 25734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 262034 - 262096
Alignment:
Q  215 cctcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccacacctt 277  Q
    |||||||| |||| |||||||| |||||| | ||| ||||| ||||||||||| |||||||||    
T  262034 cctcttctgatattaggccttagataattcagccacctcaatctacaactcttcccacacctt 262096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 237152 - 237216
Alignment:
Q  213 ttcctcttctaatatcaggccttaaataatttatccatctcaacctacaactcttaccacacctt 277  Q
    |||||||| | |||| ||| ||||||||||| | ||| ||||| ||||||||||| |||||||||    
T  237152 ttcctcttttgatattaggtcttaaataattcagccacctcaatctacaactcttcccacacctt 237216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1127 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 1224 - 1171
Alignment:
Q  35 gagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttc 88  Q
    ||||||| ||| ||||| | ||||| |||||||||||| |||||||||||||||    
T  1224 gagcttatctccgttggtaggaacaatgcataatatatgcaaggtccggggttc 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 18293 - 18350
Alignment:
Q  33 gtgagcttagctcagttggcaagaacagtgcataatatatccaaggtccggggttcga 90  Q
    ||||||||||||||||||| ||| ||| || ||||||||| |||| ||| ||||||||    
T  18293 gtgagcttagctcagttggtaaggacaatgtataatatatgcaagatccagggttcga 18350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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