View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14858_low_22 (Length: 245)

Name: NF14858_low_22
Description: NF14858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14858_low_22
NF14858_low_22
[»] chr7 (25 HSPs)
chr7 (17-245)||(47065698-47065926)
chr7 (17-245)||(7900527-7900755)
chr7 (17-245)||(26015624-26015852)
chr7 (17-245)||(43246715-43246943)
chr7 (17-245)||(46321804-46322032)
chr7 (17-245)||(8215676-8215904)
chr7 (17-245)||(27325049-27325277)
chr7 (17-245)||(40995281-40995509)
chr7 (17-245)||(46923972-46924199)
chr7 (17-240)||(40705271-40705494)
chr7 (20-245)||(32541944-32542169)
chr7 (17-242)||(34591773-34591998)
chr7 (17-245)||(40994571-40994799)
chr7 (31-245)||(8203211-8203427)
chr7 (27-245)||(21278835-21279055)
chr7 (27-245)||(25876870-25877090)
chr7 (27-245)||(47779274-47779495)
chr7 (55-242)||(7791001-7791188)
chr7 (79-245)||(38875874-38876040)
chr7 (82-245)||(38283414-38283577)
chr7 (20-180)||(32662150-32662310)
chr7 (17-126)||(35924318-35924427)
chr7 (198-245)||(32662307-32662354)
chr7 (58-136)||(48642094-48642172)
chr7 (72-138)||(25765044-25765110)
[»] chr4 (23 HSPs)
chr4 (17-245)||(19873898-19874126)
chr4 (17-245)||(28406214-28406442)
chr4 (17-245)||(37233981-37234209)
chr4 (17-245)||(42723957-42724185)
chr4 (17-245)||(20434256-20434484)
chr4 (17-245)||(25857634-25857862)
chr4 (17-245)||(53874886-53875114)
chr4 (17-245)||(52912969-52913197)
chr4 (17-245)||(55215369-55215597)
chr4 (17-245)||(39540177-39540405)
chr4 (17-245)||(52839508-52839736)
chr4 (17-245)||(55219961-55220189)
chr4 (17-245)||(56362912-56363139)
chr4 (17-242)||(23894970-23895195)
chr4 (17-245)||(613917-614145)
chr4 (17-245)||(53035794-53036022)
chr4 (22-245)||(55183308-55183531)
chr4 (36-245)||(42348754-42348963)
chr4 (29-245)||(38291643-38291859)
chr4 (49-245)||(52307265-52307461)
chr4 (66-245)||(10541857-10542036)
chr4 (181-245)||(43830157-43830221)
chr4 (17-53)||(42348961-42348997)
[»] chr3 (24 HSPs)
chr3 (17-245)||(20835357-20835585)
chr3 (18-245)||(22781683-22781910)
chr3 (17-245)||(33712399-33712626)
chr3 (22-245)||(37971454-37971677)
chr3 (17-245)||(25710980-25711208)
chr3 (21-245)||(38871214-38871438)
chr3 (17-245)||(41069929-41070156)
chr3 (17-245)||(53974404-53974631)
chr3 (24-245)||(4515796-4516017)
chr3 (17-245)||(10841208-10841435)
chr3 (22-245)||(4044588-4044811)
chr3 (17-245)||(6268133-6268361)
chr3 (17-245)||(36430361-36430588)
chr3 (17-213)||(33967007-33967203)
chr3 (28-245)||(40585955-40586174)
chr3 (27-245)||(20048428-20048649)
chr3 (27-245)||(10999529-10999749)
chr3 (95-245)||(7156541-7156674)
chr3 (58-136)||(47098139-47098217)
chr3 (58-136)||(1774218-1774296)
chr3 (22-68)||(7156488-7156536)
chr3 (18-49)||(4044492-4044523)
chr3 (213-245)||(39627093-39627125)
chr3 (213-245)||(47098274-47098306)
[»] scaffold0391 (1 HSPs)
scaffold0391 (17-245)||(3969-4197)
[»] chr8 (23 HSPs)
chr8 (17-245)||(8376334-8376562)
chr8 (17-245)||(23357018-23357246)
chr8 (20-245)||(26122290-26122515)
chr8 (20-245)||(35605431-35605656)
chr8 (17-245)||(24822485-24822713)
chr8 (17-245)||(34564790-34565018)
chr8 (17-245)||(39365340-39365567)
chr8 (22-245)||(26290545-26290768)
chr8 (22-245)||(26303802-26304025)
chr8 (17-245)||(42512253-42512481)
chr8 (22-245)||(26337157-26337380)
chr8 (22-245)||(43664092-43664314)
chr8 (66-245)||(3032708-3032887)
chr8 (78-245)||(8656648-8656815)
chr8 (82-245)||(17122184-17122347)
chr8 (66-245)||(5988282-5988461)
chr8 (66-245)||(3137035-3137214)
chr8 (86-245)||(34917632-34917791)
chr8 (117-245)||(22439467-22439595)
chr8 (58-136)||(2828154-2828232)
chr8 (64-136)||(7969866-7969938)
chr8 (58-95)||(44695641-44695678)
chr8 (17-45)||(3032695-3032723)
[»] chr2 (19 HSPs)
chr2 (17-245)||(1520270-1520498)
chr2 (17-245)||(25853195-25853423)
chr2 (17-245)||(45505548-45505776)
chr2 (17-245)||(1481905-1482133)
chr2 (17-245)||(37094182-37094410)
chr2 (17-245)||(44143454-44143682)
chr2 (17-245)||(34202373-34202601)
chr2 (21-245)||(39697544-39697768)
chr2 (22-245)||(2390455-2390677)
chr2 (17-245)||(40811536-40811763)
chr2 (22-245)||(21658021-21658243)
chr2 (22-245)||(42343062-42343284)
chr2 (18-245)||(3178320-3178546)
chr2 (17-245)||(13195901-13196128)
chr2 (17-213)||(927170-927366)
chr2 (53-245)||(43577097-43577289)
chr2 (27-245)||(10638872-10639091)
chr2 (17-238)||(874985-875195)
chr2 (156-245)||(15011913-15012002)
[»] chr1 (24 HSPs)
chr1 (17-245)||(34270535-34270763)
chr1 (17-245)||(52024819-52025047)
chr1 (22-245)||(52044156-52044379)
chr1 (17-245)||(44721965-44722193)
chr1 (22-245)||(39569222-39569445)
chr1 (17-245)||(42948283-42948512)
chr1 (17-245)||(26150927-26151155)
chr1 (17-245)||(51677010-51677238)
chr1 (22-245)||(18909309-18909532)
chr1 (17-245)||(2138007-2138235)
chr1 (17-245)||(24317275-24317501)
chr1 (17-242)||(50727894-50728119)
chr1 (35-245)||(6653318-6653528)
chr1 (22-245)||(2482396-2482622)
chr1 (22-245)||(13942237-13942460)
chr1 (17-245)||(20581593-20581822)
chr1 (72-245)||(33010603-33010776)
chr1 (66-245)||(40400127-40400306)
chr1 (92-245)||(15932880-15933033)
chr1 (95-245)||(49823298-49823448)
chr1 (127-245)||(28852791-28852909)
chr1 (98-141)||(13240166-13240209)
chr1 (22-68)||(13240110-13240158)
chr1 (17-49)||(13942525-13942557)
[»] chr6 (12 HSPs)
chr6 (17-245)||(7141357-7141585)
chr6 (17-245)||(6625452-6625680)
chr6 (17-245)||(18893769-18893997)
chr6 (17-245)||(29122116-29122344)
chr6 (17-245)||(6167698-6167926)
chr6 (27-245)||(29630267-29630486)
chr6 (28-245)||(3094682-3094901)
chr6 (120-245)||(25335003-25335128)
chr6 (145-245)||(13889848-13889948)
chr6 (36-94)||(13889791-13889849)
chr6 (58-135)||(7081155-7081232)
chr6 (58-135)||(8811127-8811204)
[»] chr5 (13 HSPs)
chr5 (22-245)||(9065792-9066015)
chr5 (17-245)||(33280903-33281131)
chr5 (17-245)||(19034484-19034712)
chr5 (17-245)||(24559162-24559390)
chr5 (17-245)||(24600194-24600422)
chr5 (17-245)||(43293421-43293649)
chr5 (17-245)||(4155932-4156160)
chr5 (17-245)||(37865969-37866197)
chr5 (17-245)||(13145645-13145872)
chr5 (27-245)||(43518062-43518283)
chr5 (69-245)||(31527393-31527569)
chr5 (17-73)||(31511149-31511205)
chr5 (58-136)||(12189146-12189224)
[»] scaffold0368 (1 HSPs)
scaffold0368 (17-245)||(13956-14185)
[»] scaffold0438 (1 HSPs)
scaffold0438 (22-245)||(1882-2105)
[»] scaffold0276 (2 HSPs)
scaffold0276 (17-245)||(13812-14039)
scaffold0276 (89-245)||(12614-12770)
[»] scaffold0007 (1 HSPs)
scaffold0007 (17-245)||(156878-157105)
[»] scaffold0248 (1 HSPs)
scaffold0248 (140-237)||(2909-3006)
[»] scaffold0896 (1 HSPs)
scaffold0896 (58-135)||(3575-3651)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 47065698 - 47065926
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47065698 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 47065797  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47065798 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 47065897  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  47065898 aagggttttggggtgtaaccaaaaaagaa 47065926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 7900755 - 7900527
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7900755 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgc 7900656  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7900655 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 7900556  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  7900555 aagggttttggggtgtaaccaaaaaagaa 7900527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 26015624 - 26015852
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26015624 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 26015723  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26015724 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttaaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 26015823  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  26015824 aagggttttggggtgtaaccaaaaaagaa 26015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 43246715 - 43246943
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43246715 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 43246814  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43246815 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 43246914  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  43246915 aagggttttggggtgtaaccaaaaaagaa 43246943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 46321804 - 46322032
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46321804 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattcaagaacaacacttgctaacctgatttgc 46321903  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46321904 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 46322003  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  46322004 aagggttttggggtgtaaccaaaaaagaa 46322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 8215676 - 8215904
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8215676 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 8215775  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8215776 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaa 8215875  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    | |||||||||||||||||||||||||||    
T  8215876 aggggttttggggtgtaaccaaaaaagaa 8215904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 27325277 - 27325049
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27325277 ctgtgaatcgtagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 27325178  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27325177 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgaaag 27325078  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  27325077 aagggttttggggtgtaaccaaaaaagaa 27325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 40995509 - 40995281
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40995509 ctgtgaatcacataacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 40995410  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40995409 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 40995310  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  40995309 aagggttttggggtgtaaccaaaaaagaa 40995281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 46924199 - 46923972
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46924199 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 46924101  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46924100 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 46924001  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  46924000 aagggttttggggtgtaaccaaaaaagaa 46923972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 40705271 - 40705494
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40705271 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagacaaacacaatcgattgaagaacaacacttgctaacctgatttgc 40705370  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40705371 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 40705470  T
Q  217 aagggttttggggtgtaaccaaaa 240  Q
    ||||||||||||||||||||||||    
T  40705471 aagggttttggggtgtaaccaaaa 40705494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 32541944 - 32542169
Alignment:
Q  20 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32541944 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttc 32542043  T
Q  120 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaag 219  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32542044 gaattttctttgaaatcatgaatggacgtgaaaaagtatggttttgaaaatcttcgtagaacacaatcgatcgattggagaattatggttttggaagaag 32542143  T
Q  220 ggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||    
T  32542144 ggttttggggtgtaaccaaaaaagaa 32542169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 34591998 - 34591773
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34591998 ctgtgaatcgcagaacaaggaaaacacaaaatcagaattgagaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 34591899  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34591898 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 34591799  T
Q  217 aagggttttggggtgtaaccaaaaaa 242  Q
    ||||||||||||||||||| ||||||    
T  34591798 aagggttttggggtgtaacaaaaaaa 34591773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 40994571 - 40994799
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40994571 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaactcataacaagaaaaacacaatcgattgaagaacaacacttgctaacctggtttgc 40994670  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40994671 ttcgaattttcttggaaatcatgaatgaacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 40994770  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||| ||||||||||||||||    
T  40994771 aagggttttgggatgtaaccaaaaaagaa 40994799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 31 - 245
Target Start/End: Original strand, 8203211 - 8203427
Alignment:
Q  31 acaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttct 128  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8203211 acaaggaaaacacaaaatcgcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttct 8203310  T
Q  129 ttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggg 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  8203311 ttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaaaggggttttggg 8203410  T
Q  229 gtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||    
T  8203411 gtgtaaccaaaaaagaa 8203427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 21278835 - 21279055
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatt 124  Q
    |||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21278835 cagaacaaagaaaacacaaaatcgcagaactgagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctaatttgcttcgaatt 21278934  T
Q  125 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21278935 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttt 21279034  T
Q  225 tggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||    
T  21279035 tggggtgtaaccaaaaaagaa 21279055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 25877090 - 25876870
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatt 124  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25877090 cagaacaaggaaaacacaaaatcgcagaactgagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatt 25876991  T
Q  125 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttt 224  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25876990 ttatttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatgattttggaagaggggttt 25876891  T
Q  225 tggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||| ||||||    
T  25876890 tggggtgtaaccaagaaagaa 25876870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 47779274 - 47779495
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaa-acacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 123  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47779274 cagaacaaggaaaacacaaaatcgcagaactgagaacccataagaagaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 47779373  T
Q  124 tttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggtt 223  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  47779374 tttctttgaaatcataaatggacgtgagaaaatatgattttgaaaatcttcgcagaacacaatcgatcgattgtagaattatggttttggaagaggggtt 47779473  T
Q  224 ttggggtgtaaccaaaaaagaa 245  Q
    |||| |||||||||| ||||||    
T  47779474 ttggagtgtaaccaagaaagaa 47779495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 7791188 - 7791001
Alignment:
Q  55 tgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaa 154  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7791188 tgagaactcataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatttgctttgaaatcatgaatggacgtgagaaa 7791089  T
Q  155 gtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaa 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||||||    
T  7791088 gtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggatttttggggtgtaacaaaaaaa 7791001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 79 - 245
Target Start/End: Original strand, 38875874 - 38876040
Alignment:
Q  79 caatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcag 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38875874 caatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcag 38875973  T
Q  179 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38875974 aacacaattgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 38876040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 82 - 245
Target Start/End: Original strand, 38283414 - 38283577
Alignment:
Q  82 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaac 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283414 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaac 38283513  T
Q  182 acaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  38283514 acaatcgatcgattggagaattatggttttggaagaagggttttgggatgtaaccaagaaagaa 38283577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 32662150 - 32662310
Alignment:
Q  20 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  32662150 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaggaaaaacacaattgattgaagaacaacacttgctaacatgatttgcttc 32662249  T
Q  120 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32662250 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaa 32662310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 35924427 - 35924318
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  35924427 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacgcaatcgattgaagaacaacacttgctaacctgatttgt 35924328  T
Q  117 ttcgaatttt 126  Q
    ||||||||||    
T  35924327 ttcgaatttt 35924318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 32662307 - 32662354
Alignment:
Q  198 agaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32662307 agaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 32662354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 48642172 - 48642094
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 136  Q
    ||||| ||||||||||||| | ||||||||||||||||  |||| ||||||| |  |||||||||||||||||||||||    
T  48642172 gaaccaataacaagaaaaatataatcgattgaagaacacaacttactaacctcacatgcttcgaattttctttgaaatc 48642094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 25765110 - 25765044
Alignment:
Q  72 aaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcat 138  Q
    ||||||| | ||||||||||||||  || ||||||||| || |||||||||||||||||||||||||    
T  25765110 aaaaacatagtcgattgaagaacacaacatgctaaccttatctgcttcgaattttctttgaaatcat 25765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 19873898 - 19874126
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19873898 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 19873997  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19873998 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 19874097  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  19874098 aagggttttggggtgtaaccaaaaaagaa 19874126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 28406214 - 28406442
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28406214 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 28406313  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28406314 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 28406413  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  28406414 aagggttttggggtgtaaccaaaaaagaa 28406442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 37233981 - 37234209
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37233981 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 37234080  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37234081 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 37234180  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  37234181 aagggttttggggtgtaaccaaaaaagaa 37234209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 42723957 - 42724185
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723957 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 42724056  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42724057 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 42724156  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  42724157 aagggttttggggtgtaaccaaaaaagaa 42724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 20434484 - 20434256
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434484 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 20434385  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434384 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 20434285  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    ||| |||||||||||||||||||||||||    
T  20434284 aagagttttggggtgtaaccaaaaaagaa 20434256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 25857862 - 25857634
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25857862 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 25857763  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25857762 ttcgaattttctttgaaatcatgaatggacgtgaaaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 25857663  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  25857662 aagggttttggggtgtaaccaaaaaagaa 25857634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 53874886 - 53875114
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53874886 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 53874985  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  53874986 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaag 53875085  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  53875086 aagggttttggggtgtaaccaaaaaagaa 53875114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 52912969 - 52913197
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  52912969 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttac 52913068  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  52913069 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaag 52913168  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  52913169 aagggttttggggtgtaaccaaaaaagaa 52913197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 55215369 - 55215597
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55215369 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccgtaacaagaaaaacacaatcgattgaataacaacacttgctaacctgatttgc 55215468  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55215469 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 55215568  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  55215569 aagggttttggggtgtaaccaaaaaagaa 55215597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 39540177 - 39540405
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39540177 ctgtgaatcgcagaataagaaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgt 39540276  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39540277 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 39540376  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  39540377 aagggttttggggtgtaaccaaaaaagaa 39540405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 52839508 - 52839736
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  52839508 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataataagaaaaacacaatcgattgaagaacaacacttgataacctgatttgc 52839607  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  52839608 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaatcatggttttggaag 52839707  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  52839708 aagggttttggggtgtaaccaaaaaagaa 52839736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 55220189 - 55219961
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55220189 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccgtaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 55220090  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55220089 ttcgaattttatttgaaatcatgaatggatgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 55219990  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  55219989 aagggttttggggtgtaaccaaaaaagaa 55219961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 56363139 - 56362912
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  56363139 ctgtgaatcgcagaacaaggaaaacacaaaatcagaacggagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 56363041  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56363040 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 56362941  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  56362940 aagggttttggggtgtaaccaaaaaagaa 56362912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 23894970 - 23895195
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23894970 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 23895069  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23895070 ttcgaattttcttcgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaag 23895169  T
Q  217 aagggttttggggtgtaaccaaaaaa 242  Q
    || |||||||||||||||||||||||    
T  23895170 aatggttttggggtgtaaccaaaaaa 23895195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 614145 - 613917
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  614145 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactaagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 614046  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  614045 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaattgatcgattgcagaattatggttttggaag 613946  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||| ||||    
T  613945 aagggttttggggtgtaaccaaaagagaa 613917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 53035794 - 53036022
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  53035794 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaatccgtaacaagaaaaatacaatcgattgaagaacaacatttgctaacctgatttgc 53035893  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53035894 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggataattatggttttggaag 53035993  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  53035994 aagggttttggggtgtaaccaaaaaagaa 53036022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 55183308 - 55183531
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55183308 aatcgcagaacaaggaaaacacaaaatcagaaaagagaacccgtaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 55183407  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55183408 attttctttgaaatcatgaatggacgtgagaaagtatggtattgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 55183507  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  55183508 ttttggggtgtaaccaaaaaagaa 55183531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 42348963 - 42348754
Alignment:
Q  36 gaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42348963 gaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 42348864  T
Q  136 catgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaac 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42348863 catgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaac 42348764  T
Q  236 caaaaaagaa 245  Q
    ||||||||||    
T  42348763 caaaaaagaa 42348754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 38291643 - 38291859
Alignment:
Q  29 gaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttct 128  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38291643 gaacaaggaaaactcaaaatcagaactgagaacccataacaagaaaaacacaatggattgaagaacaacacttgctaacctgatttgcttcgaattttct 38291742  T
Q  129 ttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggg 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38291743 ttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttagg 38291842  T
Q  229 gtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||    
T  38291843 gtgtaaccaaaaaagaa 38291859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 52307265 - 52307461
Alignment:
Q  49 cagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgt 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52307265 cagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgt 52307364  T
Q  149 gagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||    
T  52307365 gagaaagtatgattttaaaaatcatcgcagaacacaatcgatcgattggagaattatggttttggaagaggaattttggggtgtaaccaagaaagaa 52307461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 10541857 - 10542036
Alignment:
Q  66 aacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 165  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10541857 aacaaggaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 10541956  T
Q  166 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  10541957 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccaagaaagaa 10542036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 43830157 - 43830221
Alignment:
Q  181 cacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43830157 cacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 43830221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 42348997 - 42348961
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaa 53  Q
    |||||||||||||||||||||||||||||||||||||    
T  42348997 ctgtgaatcgcagaacaaggaaaacacaaaatcagaa 42348961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 20835357 - 20835585
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20835357 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 20835456  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20835457 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 20835556  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  20835557 aagggttttggggtgtaaccaaaaaagaa 20835585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 22781683 - 22781910
Alignment:
Q  18 tgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781683 tgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgct 22781782  T
Q  118 tcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781783 tcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaga 22781882  T
Q  218 agggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||    
T  22781883 agggttttggggtgtaaccaaaaaagaa 22781910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 33712399 - 33712626
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33712399 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 33712497  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33712498 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 33712597  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  33712598 aagggttttggggtgtaaccaaaaaagaa 33712626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 37971454 - 37971677
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37971454 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 37971553  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37971554 attttctttgaaatcatgaatggacgtgagaaagtatggtttttaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 37971653  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  37971654 ttttggggtgtaaccaaaaaagaa 37971677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 25711208 - 25710980
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25711208 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 25711109  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25711108 ttcgaattttctttgaaatcatgaatggacgtgagaaaatatggttttgaaaatcttcgcagaacaccatcgatcgattggagaattatggttttggaag 25711009  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  25711008 aagggttttggggtgtaaccaaaaaagaa 25710980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 38871438 - 38871214
Alignment:
Q  21 gaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38871438 gaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcg 38871339  T
Q  121 aattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38871338 aattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaatg 38871239  T
Q  221 gttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||    
T  38871238 gttttggggtgtaaccaaaaaagaa 38871214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 41070156 - 41069929
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41070156 ctgtgaatcgcagaacaaggaaaacacaaaattagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 41070058  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41070057 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcaaaacacaatcgatcgattggagaattatggttttggaag 41069958  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  41069957 aagggttttggggtgtaaccaaaaaagaa 41069929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 53974631 - 53974404
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  53974631 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgttaacctgatttgc 53974533  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53974532 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatggattggagaattatggttttggaag 53974433  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  53974432 aagggttttggggtgtaaccaaaaaagaa 53974404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 4515796 - 4516017
Alignment:
Q  24 tcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4515796 tcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 4515895  T
Q  124 tttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggtt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  4515896 tttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatgaatcgattggagaattatggttttggaagaaaggtt 4515995  T
Q  224 ttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||    
T  4515996 ttggggtgtaaccaaaaaagaa 4516017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 10841208 - 10841435
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  10841208 ctgtgaatcgcagaacaaggaaaacacaaaattagaactgagaacccataacaagagaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 10841306  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10841307 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcaaaacacaatcgatcgattggagaattatggttttggaag 10841406  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  10841407 aagggttttggggtgtaaccaaaaaagaa 10841435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 4044588 - 4044811
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4044588 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataataagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgctttga 4044687  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  4044688 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgtagaacacaatcgatcgattgaagaattatggttttggaagaaggg 4044787  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  4044788 ttttggggtgtaaccaaaaaagaa 4044811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 6268133 - 6268361
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6268133 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactaagaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 6268232  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6268233 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgtagaacacaatcgatcgattggagaattatggttttggaag 6268332  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    || |||||||||||||||  |||||||||    
T  6268333 aacggttttggggtgtaataaaaaaagaa 6268361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 36430588 - 36430361
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36430588 ctgtgaatcgcagaacaaggaaaacacaaaattagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 36430490  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  36430489 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcaaaacacaatcgatcgattggagaattatgattttggaag 36430390  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||| |||||||||    
T  36430389 aagggttttggggtgtaacaaaaaaagaa 36430361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 33967203 - 33967007
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33967203 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 33967104  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgg 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33967103 ttcgaattttctttgaaatcatgaatggatgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattgaagaattatggttttgg 33967007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 40585955 - 40586174
Alignment:
Q  28 agaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattt 125  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40585955 agaacaaggaaaacacaaaatcgcagaactgagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgcttcgaattt 40586054  T
Q  126 tctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggtttt 225  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40586055 tctttaaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgaagaacacaatcgatcgattggagaattatggttttggaagaaaggtttt 40586154  T
Q  226 ggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||    
T  40586155 ggggtgtaaccaaaaaagaa 40586174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 20048649 - 20048428
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 123  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20048649 cagaacaaggaaaacacaaaatcgaagaactgagaacccataagaagaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 20048550  T
Q  124 tttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggtt 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  20048549 tttctttgaaatcatgaatggacgtgagaaagtatgattttgaaaatcttcgcagaacacaatcgatcgattgtagaattatggttttggaagaggggtt 20048450  T
Q  224 ttggggtgtaaccaaaaaagaa 245  Q
    |||| |||||||||| ||||||    
T  20048449 ttggagtgtaaccaagaaagaa 20048428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 10999529 - 10999749
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatt 124  Q
    |||||||||||||||||||||||  || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10999529 cagaacaaggaaaacacaaaatcgcagtactgagaacccataagaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaatt 10999628  T
Q  125 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  10999629 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaattcttcgcagaacacaatcgatctattgcagaattatggttttggaagaggggttt 10999728  T
Q  225 tggggtgtaaccaaaaaagaa 245  Q
    |||| ||||||||| ||||||    
T  10999729 tgggatgtaaccaagaaagaa 10999749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 245
Target Start/End: Original strand, 7156541 - 7156674
Alignment:
Q  95 aacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgat 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||                 ||||||||| |    
T  7156541 aacacttgctaacctgatttgcttcgaattttctttgaaatcatgaaaggacgtgagaaagtatggttttga-----------------aatcgatcgtt 7156623  T
Q  195 tggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  7156624 tggagaaatatggttttggaagaggggttttggggtgtaacctaaaaagaa 7156674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 47098139 - 47098217
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 136  Q
    |||||||| |||||||||||| ||| ||||||||||||  |||||||||||| ||||||||| ||||||||||| ||||    
T  47098139 gaacccatgacaagaaaaacataattgattgaagaacacaacttgctaaccttatttgcttcaaattttctttgcaatc 47098217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 1774296 - 1774218
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 136  Q
    |||||||| ||||| |||||| ||||||||||||||||   ||| ||||||| ||||||||| ||||||||||||||||    
T  1774296 gaacccatgacaagtaaaacataatcgattgaagaacatagcttcctaaccttatttgcttcaaattttctttgaaatc 1774218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 7156488 - 7156536
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaat--cagaactgagaacccataac 68  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  7156488 aatcgcagaacaaggaaaacacaaaatcgcagaactgagaacccataac 7156536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 4044492 - 4044523
Alignment:
Q  18 tgtgaatcgcagaacaaggaaaacacaaaatc 49  Q
    ||||||||||||||||||||||||||||||||    
T  4044492 tgtgaatcgcagaacaaggaaaacacaaaatc 4044523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 39627093 - 39627125
Alignment:
Q  213 gaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||| |||||||||||||||||||||||||||    
T  39627093 gaagaggggttttggggtgtaaccaaaaaagaa 39627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 47098274 - 47098306
Alignment:
Q  213 gaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||| ||||||    
T  47098274 gaagaagggttttggggtgtaaccaagaaagaa 47098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 4197 - 3969
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4197 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 4098  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4097 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaat 3998  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  3997 aagggttttggggtgtaaccaaaaaagaa 3969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 8376562 - 8376334
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8376562 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 8376463  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8376462 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 8376363  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  8376362 aagggttttggggtgtaaccaaaaaagaa 8376334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 23357018 - 23357246
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23357018 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 23357117  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23357118 ttcgaattttctttgaaatcatgaatgaacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 23357217  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  23357218 aagggttttggggtgtaaccaaaaaagaa 23357246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 26122290 - 26122515
Alignment:
Q  20 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26122290 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttc 26122389  T
Q  120 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaag 219  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26122390 gaattttctttgaaatcatgaatggacgtgagaaattatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaag 26122489  T
Q  220 ggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||    
T  26122490 ggttttggggtgtaaccaaaaaagaa 26122515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 35605656 - 35605431
Alignment:
Q  20 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35605656 tgaatcgcagaacaaggaaaacacaaaatcagaactgagaactcataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttc 35605557  T
Q  120 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaag 219  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35605556 gaattttctttgaaatcatgaatggacatgagaaagtatggttttgaaaatcttcgcagagcacaatcgatcgattggagaattatggttttggaagaag 35605457  T
Q  220 ggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||    
T  35605456 ggttttggggtgtaaccaaaaaagaa 35605431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 24822485 - 24822713
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24822485 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 24822584  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24822585 ttcgaattttctttgaaatcatgaatggacgtgagaaattatggttttgaaaatcttcgcagaacaccatcgatcgattggagaattatggttttggaag 24822684  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    || ||||||||||||||||||||||||||    
T  24822685 aatggttttggggtgtaaccaaaaaagaa 24822713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 34564790 - 34565018
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34564790 ctgtgaatagcagaacaaggaaaacacaaaatcagaactgagaacccataacaaaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 34564889  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  34564890 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaatacaatcgatcgattggagaattatgattttggaag 34564989  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||| |||||||||    
T  34564990 aagggttttggggtgtaacaaaaaaagaa 34565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 39365567 - 39365340
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  39365567 ctgtgaatctcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacagtcaattgaagaacaacacttgctaacctgatttgc 39365469  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39365468 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 39365369  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  39365368 aagggttttggggtgtaaccaaaaaagaa 39365340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 26290545 - 26290768
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26290545 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcga 26290644  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  26290645 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaagga 26290744  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  26290745 ttttggggtgtaaccaaaaaagaa 26290768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 26303802 - 26304025
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26303802 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcga 26303901  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  26303902 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaagga 26304001  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  26304002 ttttggggtgtaaccaaaaaagaa 26304025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 42512481 - 42512253
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42512481 ctgtgaatggcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgc 42512382  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  42512381 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcggagaacacaatcgatcgattggagaattataattttggaag 42512282  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    | |||||||||||||||||||||||||||    
T  42512281 aggggttttggggtgtaaccaaaaaagaa 42512253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 26337157 - 26337380
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26337157 aatcgcagaacaaggaaaacacaaaatcagaactgagaatccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcga 26337256  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  26337257 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaagga 26337356  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  26337357 ttttggggtgtaaccaaaaaagaa 26337380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 43664092 - 43664314
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    |||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43664092 aatcgcagaactgtgaaaacacaaaatcagaactgagaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 43664191  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  43664192 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatc-atcaattggagaattatggttttggaagaaggg 43664290  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  43664291 ttttggggtgtaaccaaaaaagaa 43664314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 3032708 - 3032887
Alignment:
Q  66 aacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 165  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3032708 aacaaggaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgaacgtgagaaagtatggttttg 3032807  T
Q  166 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3032808 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 3032887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 78 - 245
Target Start/End: Complemental strand, 8656815 - 8656648
Alignment:
Q  78 acaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8656815 acaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgca 8656716  T
Q  178 gaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8656715 gaacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaa 8656648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 82 - 245
Target Start/End: Complemental strand, 17122347 - 17122184
Alignment:
Q  82 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaac 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17122347 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaac 17122248  T
Q  182 acaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17122247 acaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 17122184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 5988461 - 5988282
Alignment:
Q  66 aacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 165  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5988461 aacaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 5988362  T
Q  166 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  5988361 aaaatcttcgcagaacacaatcaatcgattggagaattatggttttggaagaggggttttgggatgtaaccaagaaagaa 5988282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 3137035 - 3137214
Alignment:
Q  66 aacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 165  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137035 aacaaggaaaacacaatcgattgaagaacaagacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 3137134  T
Q  166 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  3137135 aaaatcttcgcagaacacaatcgattgattggagaattatggttttcgaagaggggttttggggtgtaaccaagaaagaa 3137214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 86 - 245
Target Start/End: Complemental strand, 34917791 - 34917632
Alignment:
Q  86 ttgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaa 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34917791 ttgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaa 34917692  T
Q  186 tcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34917691 ttgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 34917632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 117 - 245
Target Start/End: Original strand, 22439467 - 22439595
Alignment:
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22439467 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 22439566  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  22439567 aagggttttggggtgtaaccaaaaaagaa 22439595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 2828154 - 2828232
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 136  Q
    |||||||| |||||||||||||||||||| ||||||||  ||||| |||||| ||||||||||||||||||||||||||    
T  2828154 gaacccatgacaagaaaaacacaatcgatcgaagaacacaacttgttaaccttatttgcttcgaattttctttgaaatc 2828232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 7969866 - 7969938
Alignment:
Q  64 ataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 136  Q
    ||||| ||||||||| ||||||||||||||||  |||| ||||||| || | |||||||||||||||||||||    
T  7969866 ataactagaaaaacataatcgattgaagaacacaacttactaacctcatctccttcgaattttctttgaaatc 7969938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 44695678 - 44695641
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaaca 95  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  44695678 gaacccatgacaagaaaaacataatcgattgaagaaca 44695641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 3032695 - 3032723
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaa 45  Q
    |||||||||||||||||||||||||||||    
T  3032695 ctgtgaatcgcagaacaaggaaaacacaa 3032723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 1520498 - 1520270
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1520498 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgc 1520399  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1520398 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 1520299  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  1520298 aagggttttggggtgtaaccaaaaaagaa 1520270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 25853195 - 25853423
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853195 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 25853294  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853295 ttcgaattttctttgaaatcatgaatggacgtgaaaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 25853394  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  25853395 aagggttttggggtgtaaccaaaaaagaa 25853423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 45505548 - 45505776
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45505548 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 45505647  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45505648 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttaaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 45505747  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  45505748 aagggttttggggtgtaaccaaaaaagaa 45505776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 1482133 - 1481905
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1482133 ctgtgaatcgcagaataaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 1482034  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1482033 ttcgaattttctttgaaatcatgaatggacgtgagaaaatatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 1481934  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  1481933 aagggttttggggtgtaaccaaaaaagaa 1481905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 37094410 - 37094182
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37094410 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 37094311  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37094310 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatctttgcagaacacaatcgatcgattggagaattatggttttggaag 37094211  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  37094210 aagggttttggggtgtaaccaaaaaagaa 37094182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 44143682 - 44143454
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44143682 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 44143583  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44143582 ttcaaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcataacacaatcgatcgattggagaattatggttttggaag 44143483  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  44143482 aagggttttggggtgtaaccaaaaaagaa 44143454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 34202601 - 34202373
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34202601 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 34202502  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  34202501 ttcgaattttctttgaaatcatgaatggacgtgagaaaatatggttttgaaaatcttcgcagaacacaatcaatcgattggagaattatggtttttgaag 34202402  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  34202401 aagggttttggggtgtaaccaaaaaagaa 34202373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 39697544 - 39697768
Alignment:
Q  21 gaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcg 120  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39697544 gaatcgcagaacaaggaaaatacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttct 39697643  T
Q  121 aattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39697644 aattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagg 39697743  T
Q  221 gttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||    
T  39697744 gttttggggtgtaaccaaaaaagaa 39697768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 2390455 - 2390677
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2390455 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcga 2390553  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2390554 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 2390653  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  2390654 ttttggggtgtaaccaaaaaagaa 2390677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 40811536 - 40811763
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40811536 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 40811634  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40811635 ttcaaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatctatcgattggagaattatggttttggaag 40811734  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  40811735 aagggttttggggtgtaaccaaaaaagaa 40811763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 21658243 - 21658021
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21658243 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcga 21658145  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21658144 attttctttgaaatcatgaatggacgtgagaaagtatagttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 21658045  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  21658044 ttttggggtgtaaccaaaaaagaa 21658021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 42343284 - 42343062
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42343284 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcga 42343186  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42343185 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgaaagaaggg 42343086  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  42343085 ttttggggtgtaaccaaaaaagaa 42343062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 245
Target Start/End: Complemental strand, 3178546 - 3178320
Alignment:
Q  18 tgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgct 117  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3178546 tgtgaatcgcagaataaggaaaacacaaaatcaaaactgagaacc-ataacaagaaaaacacaatcgattgaagaacaacacttgttaacctgatttgct 3178448  T
Q  118 tcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaga 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3178447 tcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggctttggaaga 3178348  T
Q  218 agggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||    
T  3178347 agggttttggggtgtaaccaaaaaagaa 3178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 13195901 - 13196128
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13195901 ctgtgaatcgcaaaacaaggaaaacacaaaatcagaactgagaactcataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgc 13195999  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13196000 ttcaaattttctttgaaatcatgaatagacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 13196099  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||| |||||||    
T  13196100 aagggttttggggtgtaaccacaaaagaa 13196128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 927366 - 927170
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  927366 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 927267  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  927266 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgg 927170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 53 - 245
Target Start/End: Complemental strand, 43577289 - 43577097
Alignment:
Q  53 actgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgaga 152  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577289 actgagaacccataacaagaaaaacacaatcgattcaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgaga 43577190  T
Q  153 aagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577189 aagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 43577097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 10639091 - 10638872
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatt 124  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10639091 cagaacaaggaaaacacaaaatcgcagaactgagaacccataagaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaatt 10638992  T
Q  125 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttt 224  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||    
T  10638991 ttctttaaaaccatgaatggacgtgagaaagtatggttttgaaaatcttcgcataacagaatcgatcgattggagaattatggttttggaag-aggggtt 10638893  T
Q  225 tggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||| ||||||    
T  10638892 tggggtgtaaccaagaaagaa 10638872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 875195 - 874985
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatca--gaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgattt 114  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  875195 ctgtgaatcgcagaacaaggaaaacacaaaatcacagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgattt 875096  T
Q  115 gcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgga 214  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||             |||||||||||| |||||| |||||||||||||||||||||||    
T  875095 gctttgaattttctttgaaatcgtgaatggacgtgagagagtat-------------ttcgcagaacacgatcgattgattggagaattatggttttgga 875009  T
Q  215 agaagggttttggggtgtaaccaa 238  Q
    ||| ||||||||||||||||||||    
T  875008 agaggggttttggggtgtaaccaa 874985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 15012002 - 15011913
Alignment:
Q  156 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15012002 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 15011913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 34270535 - 34270763
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34270535 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 34270634  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34270635 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggtttttaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 34270734  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  34270735 aagggttttggggtgtaaccaaaaaagaa 34270763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 52025047 - 52024819
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52025047 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 52024948  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52024947 ttcgaattttctttgaaatcatgaatggacatgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 52024848  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  52024847 aagggttttggggtgtaaccaaaaaagaa 52024819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 52044156 - 52044379
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52044156 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 52044255  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52044256 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 52044355  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  52044356 ttttggggtgtaaccaaaaaagaa 52044379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 44722193 - 44721965
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44722193 ctgtgaatcgcaaaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 44722094  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44722093 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattagagaattatggttttggaag 44721994  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  44721993 aagggttttggggtgtaaccaaaaaagaa 44721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 39569222 - 39569445
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39569222 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 39569321  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39569322 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacgatcgatcgattggagaattatggttttggaagaaggg 39569421  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  39569422 ttttggggtgtaaccaaaaaagaa 39569445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 42948512 - 42948283
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgatt-gaagaacaacacttgctaacctgatttg 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42948512 ctgtgaatcgcagaacaatgaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgatttgaagaacaacacttgctaacctgatttg 42948413  T
Q  116 cttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42948412 cttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaa 42948313  T
Q  216 gaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||    
T  42948312 gaagggttttggggtgtaaccaaaaaagaa 42948283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 26150927 - 26151155
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26150927 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 26151026  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26151027 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgaaag 26151126  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    ||| ||||| |||||||||||||||||||    
T  26151127 aagagttttagggtgtaaccaaaaaagaa 26151155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 51677010 - 51677238
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51677010 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgttaacctgatttgc 51677109  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  51677110 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaag 51677209  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    ||| |||||||||||||||||||||||||    
T  51677210 aagagttttggggtgtaaccaaaaaagaa 51677238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 18909532 - 18909309
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18909532 aatcgcagaacaaggaaaacacaaaatcaaaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 18909433  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18909432 attttctttgaaatcatgaatggacgtgagaaaatatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 18909333  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  18909332 ttttggggtgtaaccaaaaaagaa 18909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 2138007 - 2138235
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2138007 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgc 2138106  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  2138107 ttcgaattttctttgaaatcatgaatgaacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcaattggagaattatagttttggaag 2138206  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  2138207 aagggttttggggtgtaaccaaaaaagaa 2138235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 24317501 - 24317275
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  24317501 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cataatcgattgaagaacaacacttgctaacctgatttgc 24317403  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24317402 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatgg-tttggaag 24317304  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  24317303 aagggttttggggtgtaaccaaaaaagaa 24317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 50728119 - 50727894
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50728119 ctgtgaatcgcagaataaggaaaacacaaaatcagaactgagaacccacaacaagaaaaacacaatcaattgaagaacaacacttgctaacctgatttgc 50728020  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50728019 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatgattttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 50727920  T
Q  217 aagggttttggggtgtaaccaaaaaa 242  Q
    ||||||||||||||||||| ||||||    
T  50727919 aagggttttggggtgtaacaaaaaaa 50727894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 6653528 - 6653318
Alignment:
Q  35 ggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6653528 ggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaa 6653429  T
Q  135 tcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaa 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6653428 tcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatgattttggaagaagagttttggggtgtaa 6653329  T
Q  235 ccaaaaaagaa 245  Q
    |||||||||||    
T  6653328 ccaaaaaagaa 6653318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 2482396 - 2482622
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2482396 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 2482495  T
Q  122 attttctttgaaatcatgaat----ggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaga 217  Q
    | |||||||||||||||||||    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2482496 a-tttctttgaaatcatgaatggacggacgtgagaaagtatggttttgaaaatctttgcagaacacaatcgatcgattggagaattatggttttggaaga 2482594  T
Q  218 agggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||    
T  2482595 agggttttggggtgtaaccaaaaaagaa 2482622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 13942460 - 13942237
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  |    
T  13942460 aatcgcagaacaagaaaaacacaaaatcagaactgagaacccataataagaaaaacacaatcgagtgaagaacaacacttgctaacctgatttgctttaa 13942361  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |    
T  13942360 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgaaaaacacaatcgatcgattggagaattatggttttggaagaagag 13942261  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  13942260 ttttggggtgtaaccaaaaaagaa 13942237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 20581822 - 20581593
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgattt 114  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  20581822 ctgtgaatcacagaacaaggaaaacacaaaatcgcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacataattt 20581723  T
Q  115 gcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgga 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20581722 gcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgaagaacacaatcgatcgattggagaattatggttttgga 20581623  T
Q  215 agaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||| ||||||| |||||||||||||||||||    
T  20581622 agaggggtttt-gggtgtaaccaaaaaagaa 20581593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 33010603 - 33010776
Alignment:
Q  72 aaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatc 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33010603 aaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatc 33010702  T
Q  172 ttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33010703 ttcgcaaaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 33010776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 40400306 - 40400127
Alignment:
Q  66 aacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttg 165  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40400306 aacaaggaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcctgaatggacgtgagaaagtatggttttg 40400207  T
Q  166 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  40400206 aaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttgggatgtaaccaagaaagaa 40400127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 15933033 - 15932880
Alignment:
Q  92 aacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatc 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15933033 aacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggtttttaaaatcttcgcagaacacaatcgatc 15932934  T
Q  192 gattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15932933 gattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 15932880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 49823448 - 49823298
Alignment:
Q  95 aacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgat 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49823448 aacacttgctaacctgatttacttcgaattttctttgaaatcatgaatggacgtgaaaaagtatggttttgaaaatcttcgcagaacacaatcgatcgat 49823349  T
Q  195 tggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49823348 tggagaattatggtttcggaagaagggttttggggtgtaaccaaaaaagaa 49823298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 28852791 - 28852909
Alignment:
Q  127 ctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28852791 ctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatagttttggaagaagggttttg 28852890  T
Q  227 gggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||    
T  28852891 gggtgtaaccaaaaaagaa 28852909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 13240166 - 13240209
Alignment:
Q  98 acttgctaacctgatttgcttcgaattttctttgaaatcatgaa 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13240166 acttgctaacctgatttgcttcgaattttctttgaaatcatgaa 13240209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 13240110 - 13240158
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaat--cagaactgagaacccataac 68  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  13240110 aatcgcagaataaggaaaacacaaaatcgcagaactgagaacccataac 13240158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 13942557 - 13942525
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatc 49  Q
    |||||||||||||||||||||||||||||||||    
T  13942557 ctgtgaatcgcagaacaaggaaaacacaaaatc 13942525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 221; Significance: 1e-122; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 7141585 - 7141357
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7141585 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaaaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 7141486  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7141485 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaat 7141386  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  7141385 aagggttttggggtgtaaccaaaaaagaa 7141357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 6625680 - 6625452
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6625680 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatctattgaagaacaacacttgctaacctgatttgc 6625581  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6625580 ttcgaattttctttgaaatcatgaatgaacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaag 6625481  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  6625480 aagggttttggggtgtaaccaaaaaagaa 6625452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 18893997 - 18893769
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18893997 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 18893898  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  18893897 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcaatcggttggagaattatggttctggaag 18893798  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  18893797 aagggttttggggtgtaaccaaaaaagaa 18893769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 29122116 - 29122344
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29122116 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataataagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 29122215  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29122216 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcataacacaatcgatcgattgaagaattatggttttggaag 29122315  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||| ||||||||||||||||||    
T  29122316 aagggttttgaggtgtaaccaaaaaagaa 29122344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 6167698 - 6167926
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6167698 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaaccgaccacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 6167797  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6167798 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatgggtttgaaaatcttcgcagaacacaatcgatcgattggagaattatggatttggaag 6167897  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  6167898 aagggttttggggtgtaaccaaaaaagaa 6167926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 29630267 - 29630486
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatt 124  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  29630267 cagaacaaggaaaacacaaaatcgcagaactgagaacccataagaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgctttgaatt 29630365  T
Q  125 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29630366 ttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttt 29630465  T
Q  225 tggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||| ||||||    
T  29630466 tggggtgtaaccaagaaagaa 29630486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 28 - 245
Target Start/End: Complemental strand, 3094901 - 3094682
Alignment:
Q  28 agaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattt 125  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3094901 agaacaaggaaaacacaaaatcgcagaactgagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacatgatttgcttcgaattt 3094802  T
Q  126 tctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggtttt 225  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||    
T  3094801 tatttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacataatcgatcgattggagaattatggttttggaagagaggtttt 3094702  T
Q  226 ggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||| ||||||    
T  3094701 ggggtgtaaccaagaaagaa 3094682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 25335003 - 25335128
Alignment:
Q  120 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaag 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25335003 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaag 25335102  T
Q  220 ggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||| |||||||||    
T  25335103 ggttttggggtgtaacaaaaaaagaa 25335128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 13889848 - 13889948
Alignment:
Q  145 acgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaaga 244  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13889848 acgtgagaaagtatggttttgaaaatcttcgtagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaaga 13889947  T
Q  245 a 245  Q
    |    
T  13889948 a 13889948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 13889791 - 13889849
Alignment:
Q  36 gaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13889791 gaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaac 13889849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 7081232 - 7081155
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 135  Q
    ||||||||||||||||||||| ||| |||||||||| |  ||||| |||||| |||||||||||| ||||||||||||    
T  7081232 gaacccataacaagaaaaacataattgattgaagaatacaacttgttaaccttatttgcttcgaaatttctttgaaat 7081155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 8811127 - 8811204
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 135  Q
    ||||||||||||||||||||| ||| |||||||||| |  |||||||||||| |||||||| ||| ||||||||||||    
T  8811127 gaacccataacaagaaaaacataattgattgaagaatacaacttgctaaccttatttgctttgaaatttctttgaaat 8811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 9066015 - 9065792
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9066015 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 9065916  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9065915 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcaattggagaattatggttttggaagaaggg 9065816  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  9065815 ttttggggtgtaaccaaaaaagaa 9065792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 33281131 - 33280903
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33281131 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgc 33281032  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  33281031 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcggttggaaaattatggttttggaag 33280932  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  33280931 aagggttttggggtgtaaccaaaaaagaa 33280903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 19034484 - 19034712
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19034484 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaatccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 19034583  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19034584 ttcgaattttctttgaaatcataaatagacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 19034683  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||| ||||||||||||||||    
T  19034684 aagggttttgggatgtaaccaaaaaagaa 19034712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 24559390 - 24559162
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24559390 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 24559291  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||    
T  24559290 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacagtcgatcgattagagaattatggttttgtaag 24559191  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    || ||||||||||||||||||||||||||    
T  24559190 aaaggttttggggtgtaaccaaaaaagaa 24559162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 24600422 - 24600194
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24600422 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 24600323  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||    
T  24600322 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacagtcgatcgattagagaattatggttttgtaag 24600223  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    || ||||||||||||||||||||||||||    
T  24600222 aaaggttttggggtgtaaccaaaaaagaa 24600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 43293421 - 43293649
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43293421 ctgtgactcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgc 43293520  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  43293521 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatctgttggagaattatggttttggaag 43293620  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  43293621 aagggttttggggtgtaaccaaaaaagaa 43293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 4155932 - 4156160
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4155932 ctgtgaatcgtagaacaatgaaaacacaaaatcagaactgagaacccgtaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 4156031  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4156032 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatgattttgaaaatcttcgcagaacacaatcgatcgattggagaattatgattttggaag 4156131  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  4156132 aagggttttggggtgtaaccaaaaaagaa 4156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 37866197 - 37865969
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37866197 ctgtgaatcgcagaacaaggaaagcacaaaatcagaactgagaacccataataagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 37866098  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37866097 ttcgaattttctttgaaatcatgaatagacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgattgattggagaattatggttttggaag 37865998  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    || ||||||||||||||||||||||||||    
T  37865997 aatggttttggggtgtaaccaaaaaagaa 37865969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 13145645 - 13145872
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  13145645 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacatgatttgc 13145743  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  13145744 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatctttgcagaacacaatcgatcgatttgagaattatggttttggaag 13145843  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||| ||||||||||    
T  13145844 aagggttttggggtgtaatcaaaaaagaa 13145872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 43518062 - 43518283
Alignment:
Q  27 cagaacaaggaaaacacaaaatc--agaactgagaacccataacaagaaaa-acacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 123  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43518062 cagaacaaggaaaacacaaaatcgcagaactgagaacccataagaagaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaat 43518161  T
Q  124 tttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggtt 223  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  43518162 tttctttgaaatcattaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattgtagaattatggttttggaagaggggtt 43518261  T
Q  224 ttggggtgtaaccaaaaaagaa 245  Q
    |||| |||||||||| ||||||    
T  43518262 ttggagtgtaaccaagaaagaa 43518283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 69 - 245
Target Start/End: Original strand, 31527393 - 31527569
Alignment:
Q  69 aagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31527393 aagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgaacgtgagaaagtatggttttgaaa 31527492  T
Q  169 atcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31527493 atcttcgcagaacacaatcgatcgattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 31527569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 31511149 - 31511205
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaa 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31511149 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaa 31511205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 12189146 - 12189224
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 136  Q
    |||||||| |||||||||||| ||| ||| |||||||| ||||||||||||| |||||||||||| |||||||||||||    
T  12189146 gaacccatgacaagaaaaacataattgatcgaagaacaccacttgctaacctcatttgcttcgaactttctttgaaatc 12189224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 14185 - 13956
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgatt-gaagaacaacacttgctaacctgatttg 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14185 ctgtgaatcgcagaacaatgaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgatttgaagaacaacacttgctaacctgatttg 14086  T
Q  116 cttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14085 cttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaa 13986  T
Q  216 gaagggttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||||||||    
T  13985 gaagggttttggggtgtaaccaaaaaagaa 13956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 22 - 245
Target Start/End: Original strand, 1882 - 2105
Alignment:
Q  22 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  1882 aatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcga 1981  T
Q  122 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  1982 attttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaagga 2081  T
Q  222 ttttggggtgtaaccaaaaaagaa 245  Q
    ||||||||||||||||||||||||    
T  2082 ttttggggtgtaaccaaaaaagaa 2105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 13812 - 14039
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13812 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaa-aaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 13910  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| |||||||||     
T  13911 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatgcttttgaaaatcttcgcagaacacaatcgatggattgaagaattatcgttttggaaa 14010  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  14011 aagggttttggggtgtaaccaaaaaagaa 14039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 12770 - 12614
Alignment:
Q  89 aagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12770 aagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatgcttttgaaaatcttcgcagaacacaatcg 12671  T
Q  189 atcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 245  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12670 atggattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 12614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 156878 - 157105
Alignment:
Q  17 ctgtgaatcgcagaacaaggaaaacacaaaatcagaactgagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgc 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  156878 ctgtgaatcgcagaacaaggaaaacacaaaattagaactgagaacccataacaagaaaa-cgcaatcgattgaagaacaacacttgctaacctgatttgc 156976  T
Q  117 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 216  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  156977 ttcgaattttcttgaaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaattgatcgattggagaattatggttttggaag 157076  T
Q  217 aagggttttggggtgtaaccaaaaaagaa 245  Q
    |||||||||||||||||||||||||||||    
T  157077 aagggttttggggtgtaaccaaaaaagaa 157105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 2909 - 3006
Alignment:
Q  140 aatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaacca 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2909 aatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaacca 3006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 3575 - 3651
Alignment:
Q  58 gaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 135  Q
    ||||||||||||||||||||| ||| |||||||||| |  |||||||||||| |||||||| |||  |||||||||||    
T  3575 gaacccataacaagaaaaacataattgattgaagaatacaacttgctaaccttatttgctttgaa-attctttgaaat 3651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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