View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14859_high_4 (Length: 261)

Name: NF14859_high_4
Description: NF14859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14859_high_4
NF14859_high_4
[»] chr1 (42 HSPs)
chr1 (10-261)||(5507772-5508022)
chr1 (40-118)||(17139507-17139585)
chr1 (41-118)||(48681923-48682000)
chr1 (41-92)||(27853349-27853400)
chr1 (41-91)||(8148382-8148432)
chr1 (41-91)||(12213987-12214037)
chr1 (41-91)||(21400040-21400090)
chr1 (41-91)||(37045163-37045213)
chr1 (41-118)||(8269358-8269435)
chr1 (41-86)||(17201228-17201273)
chr1 (41-86)||(30279642-30279687)
chr1 (41-90)||(35308179-35308228)
chr1 (41-86)||(44243867-44243912)
chr1 (41-86)||(44365970-44366015)
chr1 (42-86)||(24695554-24695598)
chr1 (41-84)||(11661402-11661445)
chr1 (44-86)||(3573346-3573388)
chr1 (41-91)||(5503782-5503832)
chr1 (41-91)||(19620570-19620620)
chr1 (41-91)||(27533237-27533287)
chr1 (41-91)||(30795695-30795745)
chr1 (41-87)||(35690206-35690252)
chr1 (41-75)||(37098514-37098548)
chr1 (41-75)||(39452454-39452488)
chr1 (41-91)||(42045389-42045439)
chr1 (41-91)||(49183167-49183217)
chr1 (41-118)||(1794590-1794667)
chr1 (41-74)||(3481554-3481587)
chr1 (41-86)||(6219884-6219929)
chr1 (41-86)||(7925358-7925403)
chr1 (38-67)||(17280125-17280154)
chr1 (41-90)||(26086923-26086972)
chr1 (41-118)||(29441871-29441948)
chr1 (41-86)||(30678835-30678880)
chr1 (41-86)||(36371062-36371107)
chr1 (41-86)||(40268204-40268249)
chr1 (41-118)||(41884795-41884872)
chr1 (40-92)||(7616842-7616894)
chr1 (41-69)||(29204642-29204670)
chr1 (42-86)||(32209860-32209904)
chr1 (46-86)||(41677612-41677652)
chr1 (41-69)||(41763194-41763222)
[»] chr8 (32 HSPs)
chr8 (41-117)||(11708980-11709056)
chr8 (41-91)||(33445564-33445614)
chr8 (41-91)||(27191752-27191802)
chr8 (41-91)||(39821878-39821928)
chr8 (35-91)||(37015853-37015909)
chr8 (40-91)||(7380037-7380088)
chr8 (36-91)||(13357458-13357513)
chr8 (40-118)||(6314313-6314391)
chr8 (41-91)||(10732792-10732842)
chr8 (49-91)||(11104766-11104808)
chr8 (40-118)||(11771700-11771777)
chr8 (45-91)||(29716717-29716763)
chr8 (40-86)||(35682714-35682760)
chr8 (41-91)||(39433404-39433454)
chr8 (41-91)||(43962041-43962091)
chr8 (41-107)||(44019543-44019609)
chr8 (41-74)||(8020304-8020337)
chr8 (41-118)||(13575283-13575360)
chr8 (41-114)||(14303159-14303232)
chr8 (42-91)||(17704008-17704057)
chr8 (41-118)||(19163526-19163603)
chr8 (42-71)||(28420467-28420496)
chr8 (41-86)||(32878655-32878700)
chr8 (40-69)||(45105692-45105721)
chr8 (48-88)||(7280683-7280723)
chr8 (41-73)||(14975898-14975930)
chr8 (41-117)||(27718885-27718961)
chr8 (41-85)||(36910967-36911011)
chr8 (40-92)||(37117540-37117592)
chr8 (42-86)||(39975485-39975529)
chr8 (47-91)||(40512647-40512691)
chr8 (47-91)||(40795377-40795421)
[»] chr7 (30 HSPs)
chr7 (141-201)||(23183676-23183736)
chr7 (40-91)||(5352322-5352373)
chr7 (39-118)||(580916-580995)
chr7 (40-118)||(39801699-39801777)
chr7 (40-85)||(4098642-4098687)
chr7 (45-118)||(28200375-28200448)
chr7 (41-90)||(48980481-48980530)
chr7 (42-86)||(2622320-2622364)
chr7 (40-92)||(5526718-5526770)
chr7 (39-91)||(16577877-16577929)
chr7 (39-91)||(16587733-16587785)
chr7 (41-92)||(7476720-7476771)
chr7 (40-91)||(10244720-10244771)
chr7 (46-92)||(2391006-2391052)
chr7 (42-92)||(9819565-9819615)
chr7 (42-92)||(10721490-10721540)
chr7 (41-75)||(14786117-14786151)
chr7 (41-91)||(38088034-38088084)
chr7 (41-75)||(46207754-46207788)
chr7 (41-75)||(47589586-47589620)
chr7 (41-86)||(1120053-1120098)
chr7 (41-118)||(36341055-36341132)
chr7 (41-86)||(36803832-36803877)
chr7 (41-86)||(40752861-40752906)
chr7 (41-86)||(43539126-43539171)
chr7 (41-69)||(13851979-13852007)
chr7 (39-91)||(16537553-16537605)
chr7 (39-91)||(16628057-16628109)
chr7 (44-92)||(18505673-18505721)
chr7 (48-92)||(45051698-45051742)
[»] chr4 (34 HSPs)
chr4 (41-92)||(10082396-10082447)
chr4 (42-90)||(11949681-11949729)
chr4 (40-91)||(3527383-3527434)
chr4 (41-92)||(9913893-9913944)
chr4 (41-91)||(20799411-20799461)
chr4 (40-114)||(40070962-40071036)
chr4 (41-91)||(50362156-50362206)
chr4 (41-118)||(24664981-24665058)
chr4 (50-118)||(836225-836293)
chr4 (47-118)||(3936627-3936698)
chr4 (41-92)||(8494981-8495032)
chr4 (40-91)||(12322666-12322717)
chr4 (39-86)||(13984664-13984711)
chr4 (47-118)||(19908692-19908763)
chr4 (41-92)||(23225859-23225910)
chr4 (39-86)||(43539807-43539854)
chr4 (41-92)||(50774567-50774618)
chr4 (41-91)||(2186350-2186400)
chr4 (44-74)||(3047200-3047230)
chr4 (41-91)||(7230274-7230324)
chr4 (41-91)||(13121538-13121588)
chr4 (41-91)||(23304033-23304083)
chr4 (41-75)||(35287540-35287574)
chr4 (42-92)||(45970723-45970773)
chr4 (44-78)||(51515097-51515131)
chr4 (41-91)||(52270047-52270097)
chr4 (41-118)||(9946421-9946498)
chr4 (41-118)||(11949753-11949830)
chr4 (41-86)||(22164291-22164336)
chr4 (41-118)||(24079830-24079906)
chr4 (38-86)||(2932114-2932162)
chr4 (23-91)||(21318270-21318338)
chr4 (44-91)||(32139336-32139384)
chr4 (50-118)||(34960147-34960215)
[»] chr2 (41 HSPs)
chr2 (41-92)||(27934873-27934924)
chr2 (41-92)||(9517025-9517076)
chr2 (40-91)||(11846390-11846441)
chr2 (40-91)||(30089042-30089093)
chr2 (40-91)||(30125646-30125697)
chr2 (40-86)||(15381626-15381672)
chr2 (41-91)||(22523029-22523079)
chr2 (38-91)||(24592863-24592916)
chr2 (42-87)||(36171523-36171568)
chr2 (40-92)||(7029407-7029459)
chr2 (39-75)||(9842235-9842271)
chr2 (44-92)||(44496716-44496764)
chr2 (36-91)||(2256960-2257015)
chr2 (40-91)||(9383226-9383277)
chr2 (40-91)||(10735848-10735899)
chr2 (44-91)||(20565092-20565139)
chr2 (40-91)||(30243243-30243294)
chr2 (40-75)||(35820334-35820369)
chr2 (44-115)||(40896502-40896573)
chr2 (41-92)||(45032687-45032738)
chr2 (41-91)||(3197096-3197146)
chr2 (38-92)||(7042783-7042837)
chr2 (41-91)||(7206119-7206169)
chr2 (40-90)||(13922650-13922700)
chr2 (41-75)||(17736787-17736821)
chr2 (41-91)||(27244651-27244701)
chr2 (44-118)||(31815877-31815951)
chr2 (41-75)||(35456854-35456888)
chr2 (41-86)||(7201501-7201546)
chr2 (46-91)||(7413206-7413251)
chr2 (41-86)||(8761586-8761631)
chr2 (41-86)||(8775264-8775309)
chr2 (41-86)||(8788316-8788361)
chr2 (46-91)||(10156016-10156061)
chr2 (45-86)||(11953944-11953985)
chr2 (41-118)||(33063980-33064057)
chr2 (40-85)||(44526121-44526166)
chr2 (39-91)||(13196692-13196744)
chr2 (42-86)||(20517017-20517061)
chr2 (44-92)||(32887356-32887404)
chr2 (39-71)||(41566757-41566789)
[»] chr6 (33 HSPs)
chr6 (45-91)||(135159-135205)
chr6 (41-86)||(5655329-5655374)
chr6 (41-90)||(9558442-9558491)
chr6 (42-84)||(4379509-4379551)
chr6 (46-92)||(10118916-10118962)
chr6 (41-91)||(21847188-21847238)
chr6 (41-118)||(2445293-2445370)
chr6 (42-118)||(5632129-5632205)
chr6 (32-91)||(8810625-8810684)
chr6 (44-91)||(9581963-9582010)
chr6 (44-91)||(10780124-10780171)
chr6 (40-91)||(14917792-14917843)
chr6 (40-91)||(17151229-17151280)
chr6 (40-75)||(20480664-20480699)
chr6 (44-91)||(33938696-33938743)
chr6 (41-91)||(8217377-8217427)
chr6 (41-91)||(8916491-8916541)
chr6 (41-111)||(9111041-9111111)
chr6 (41-75)||(9444951-9444985)
chr6 (41-75)||(11129643-11129677)
chr6 (40-114)||(13496109-13496183)
chr6 (41-91)||(32053782-32053832)
chr6 (41-91)||(34701141-34701191)
chr6 (41-118)||(788860-788937)
chr6 (41-86)||(9311952-9311997)
chr6 (41-86)||(16390423-16390468)
chr6 (38-91)||(18256874-18256927)
chr6 (42-91)||(20744133-20744182)
chr6 (47-92)||(26522472-26522517)
chr6 (42-91)||(28951394-28951443)
chr6 (39-91)||(331903-331955)
chr6 (39-91)||(9392685-9392737)
chr6 (39-75)||(10320464-10320500)
[»] chr5 (37 HSPs)
chr5 (41-86)||(27721697-27721742)
chr5 (43-117)||(5107236-5107310)
chr5 (41-91)||(6489001-6489051)
chr5 (44-118)||(13864341-13864415)
chr5 (41-91)||(15889405-15889455)
chr5 (41-91)||(20370147-20370197)
chr5 (42-92)||(22619869-22619919)
chr5 (41-91)||(34436845-34436895)
chr5 (41-86)||(5485180-5485225)
chr5 (41-90)||(42663222-42663271)
chr5 (41-76)||(3630653-3630688)
chr5 (40-91)||(18589884-18589935)
chr5 (45-92)||(20365488-20365535)
chr5 (44-91)||(22297382-22297429)
chr5 (44-75)||(31591570-31591601)
chr5 (40-75)||(33133632-33133667)
chr5 (41-75)||(7336348-7336382)
chr5 (41-87)||(10199013-10199059)
chr5 (41-91)||(17210726-17210776)
chr5 (41-91)||(19759923-19759973)
chr5 (42-92)||(20175720-20175770)
chr5 (41-91)||(20211274-20211324)
chr5 (47-97)||(20927639-20927689)
chr5 (41-91)||(36321511-36321561)
chr5 (41-91)||(37932324-37932374)
chr5 (41-118)||(6624770-6624847)
chr5 (41-90)||(14880406-14880455)
chr5 (42-75)||(16701614-16701647)
chr5 (41-118)||(28207126-28207203)
chr5 (41-78)||(33369443-33369480)
chr5 (41-74)||(36422491-36422524)
chr5 (47-92)||(41633633-41633678)
chr5 (41-90)||(41939280-41939329)
chr5 (41-81)||(9699922-9699962)
chr5 (42-86)||(17861974-17862018)
chr5 (60-92)||(31625549-31625581)
chr5 (39-87)||(40730216-40730264)
[»] chr3 (37 HSPs)
chr3 (38-91)||(33223859-33223912)
chr3 (39-74)||(10295184-10295219)
chr3 (40-91)||(18870742-18870793)
chr3 (44-91)||(27185474-27185521)
chr3 (41-91)||(43345024-43345074)
chr3 (41-86)||(1757691-1757736)
chr3 (41-86)||(7868716-7868761)
chr3 (41-118)||(22722396-22722473)
chr3 (40-91)||(35863830-35863881)
chr3 (44-91)||(43490434-43490481)
chr3 (41-92)||(47255753-47255804)
chr3 (41-91)||(1149086-1149136)
chr3 (45-91)||(7938722-7938768)
chr3 (41-91)||(10498712-10498762)
chr3 (41-91)||(16980371-16980421)
chr3 (44-86)||(34268606-34268647)
chr3 (41-91)||(36483670-36483720)
chr3 (52-118)||(38869508-38869574)
chr3 (41-83)||(44447186-44447228)
chr3 (39-69)||(44764717-44764747)
chr3 (42-87)||(2151055-2151100)
chr3 (38-87)||(2496546-2496595)
chr3 (41-86)||(7464513-7464558)
chr3 (49-86)||(17755123-17755160)
chr3 (49-86)||(19056443-19056480)
chr3 (45-118)||(24273621-24273694)
chr3 (41-118)||(28244094-28244171)
chr3 (41-86)||(28918912-28918957)
chr3 (41-118)||(51250223-51250300)
chr3 (47-75)||(6901487-6901515)
chr3 (46-118)||(8113552-8113624)
chr3 (44-92)||(8831361-8831409)
chr3 (46-118)||(10922298-10922370)
chr3 (47-91)||(13800667-13800711)
chr3 (41-117)||(34899091-34899167)
chr3 (40-92)||(38387965-38388017)
chr3 (38-86)||(47471612-47471660)
[»] scaffold0098 (1 HSPs)
scaffold0098 (40-92)||(5418-5470)
[»] scaffold0011 (1 HSPs)
scaffold0011 (40-92)||(223151-223203)
[»] scaffold0896 (1 HSPs)
scaffold0896 (32-91)||(3126-3185)
[»] scaffold0417 (1 HSPs)
scaffold0417 (41-114)||(8167-8240)
[»] scaffold0045 (2 HSPs)
scaffold0045 (41-90)||(63856-63905)
scaffold0045 (41-90)||(71188-71237)
[»] scaffold0017 (1 HSPs)
scaffold0017 (38-86)||(35950-35998)


Alignment Details
Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 261
Target Start/End: Original strand, 5507772 - 5508022
Alignment:
Q  10 attattctaagtatcaaacacttgaatgtcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaacccc 109  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||    
T  5507772 attatactaagtatcagacatttgaatgtcagtcctcgtgagcttagctcagttagtaggaacaatacaaaatatatacaaga-ccgaagctcgaactcc 5507870  T
Q  110 gaccaccacnnnnnnnnngacacttatatgtcaacattttcacaaaactatcatgaattaaatataaatctagatcataatgatacaacatctttagnnn 209  Q
    |||||||||         |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  5507871 gaccaccacaaaaaaaaagacacttaaatgtcaacattttcacaaaactatcatgaattaaatataaatctagatcataatgatacaacatctttagaaa 5507970  T
Q  210 nnnntttaatgtgaggcttccttgattgtgtttatgatccatggttttctat 261  Q
        | ||||||||||||||||||||||||||||||||||||||||||||||    
T  5507971 aaaatgtaatgtgaggcttccttgattgtgtttatgatccatggttttctat 5508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 17139585 - 17139507
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||| ||||  |||  | || |||||||||||||||    
T  17139585 agtcctcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 48682000 - 48681923
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||| ||||   || ||||| ||| |||||||||||    
T  48682000 gtcctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggagctcaaactccgaccaccac 48681923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 27853349 - 27853400
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||| ||||||||||| ||||||| || |||||||||||||    
T  27853349 gtcctcgtgagcttaactcagttggtatgaacaatgcataatatatacaaga 27853400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 8148432 - 8148382
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||| ||||    
T  8148432 gtccccgtgagcttagctcagttggtaagaacaatacataatatatgcaag 8148382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 12213987 - 12214037
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||| ||||    
T  12213987 gtccttgtgagcttagctcagttgataggaacaatacataatatatgcaag 12214037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 21400090 - 21400040
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 21400040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 37045213 - 37045163
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||| ||||    
T  37045213 gtcctcgtgagctcagctcagttggtaggaacaatgcataatatatgcaag 37045163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 8269435 - 8269358
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||| |||||||||||||||| | |||||||| ||||||| ||||  |||  | || |||||||||||||||    
T  8269435 gtcctcgtgaacttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 8269358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 17201273 - 17201228
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||    
T  17201273 gtcctcgtgaacttagctcagttggtagggacaatacataatatat 17201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 30279687 - 30279642
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||    
T  30279687 gtcctcgtgagcttagctcagttgataggtacaatacataatatat 30279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 35308179 - 35308228
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    |||||||||||||||| |||||||||| ||||||| || |||||||||||    
T  35308179 gtcctcgtgagcttagttcagttggtatgaacaatgcataatatatacaa 35308228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 44243867 - 44243912
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||    
T  44243867 gtcctcgtgagtttagctcagttggtaggaacaatgcataatatat 44243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 44366015 - 44365970
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||    
T  44366015 gtcctcgtgagtttaactcagttggtaggaacaatacataatatat 44365970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 24695554 - 24695598
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||    
T  24695554 tcctcgtgagtttagctcagttggtatgaacaatacataatatat 24695598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 11661402 - 11661445
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatat 84  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||    
T  11661402 gtcctcgtgagcttaactcagttggtaggaacaacacataatat 11661445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 3573388 - 3573346
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||| ||||||||||||||||||| || |||||||    
T  3573388 ctcgtgagcttaactcagttggtaggaacaatgcataatatat 3573346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 5503832 - 5503782
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||| ||||||||||||||||||| |||||| || || |||||||||    
T  5503832 gtcctcgtaagcttagctcagttggtagaaacaatgcataaaatatacaag 5503782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 19620570 - 19620620
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||| |||||||||||||||||||||| | |||||||| ||||||| ||||    
T  19620570 gtccccgtgagcttagctcagttggtaaggacaatacataatatatgcaag 19620620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 27533237 - 27533287
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||| |||||||||||| ||||| || ||||||| ||||    
T  27533237 gtcctcgtgagcttagatcagttggtagggacaatgcataatatatgcaag 27533287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 30795695 - 30795745
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||| |||||||||||||||| ||||||| || ||||||| ||||    
T  30795695 gtcctcgtgaacttagctcagttggtaagaacaatgcataatatatgcaag 30795745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 35690206 - 35690252
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatata 87  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  35690206 gtccttgtgagcttaactcagttggtaggaataatacataatatata 35690252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 37098548 - 37098514
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||||| |||||    
T  37098548 gtcctcgtgagcttagctcagttggtagggacaat 37098514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 39452454 - 39452488
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  39452454 gtcctcgtgagcttagctcagttggtatgaacaat 39452488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 42045439 - 42045389
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  42045439 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 42045389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 49183167 - 49183217
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| ||||||||||||||| | |||||||| ||||||| ||||    
T  49183167 gtcctcgtgagtttagctcagttggtaaggacaatacataatatatgcaag 49183217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 1794590 - 1794667
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||| ||| | ||||| || ||||||| ||||| |||  | || |||| ||||||||||    
T  1794590 gtcctcgtgagcttagctcagttagtatggacaatgcataatatatgcaagatccggggttcaaacctcgaccaccac 1794667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 3481554 - 3481587
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaa 74  Q
    ||||||||||||||||||||||||||||| ||||    
T  3481554 gtcctcgtgagcttagctcagttggtagggacaa 3481587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 6219929 - 6219884
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||| ||| ||||||||| |||||||| |||||||    
T  6219929 gtcctcgtgagcttaactcggttggtagggacaatacataatatat 6219884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 7925358 - 7925403
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||    
T  7925358 gtcctcgtgagcttagctcagttggtagagacaatgcataatatat 7925403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 17280154 - 17280125
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggta 67  Q
    ||||||||||||||||||||||||||||||    
T  17280154 tcagtcctcgtgagcttagctcagttggta 17280125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 26086923 - 26086972
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||||||| ||||||||||| || |||| || |||||||||||    
T  26086923 gtcctcgtgagcttaactcagttggtatgatcaatgcataatatatacaa 26086972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 29441948 - 29441871
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||| |||||| ||||||||||| ||||||||||||||  |||||| ||||| ||||   || ||| |||||||||||    
T  29441948 gtccacgtgagtttagctcagttagtaggaacaatacatgatatatgcaagatccgagattcaaactccgaccaccac 29441871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 30678880 - 30678835
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||| ||||||||||||| ||||| || |||||||    
T  30678880 gtcctcgtgagcttaactcagttggtagggacaatgcataatatat 30678835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 36371107 - 36371062
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||    
T  36371107 gtcctcgtgagcttagctcagttggtagagacaatgcataatatat 36371062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 40268204 - 40268249
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||| | ||| |||| |||||||    
T  40268204 gtcctcgtgagcttagctcagttggtatggacagtacataatatat 40268249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 41884872 - 41884795
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||| ||||||||||| ||  | |||||||| ||||||||||||  |||  | |||||||||| |||||||    
T  41884872 gtcctcgtgagtttagctcagttagtttggacaatacataatatatacaaggtccggggttcgaaccccggccaccac 41884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 7616894 - 7616842
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||| ||| ||||||||||||||||||||  |||||||| || ||||||||||    
T  7616894 agtcatcgggagcttagctcagttggtagagacaatacataaaatatacaaga 7616842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 29204642 - 29204670
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtagg 69  Q
    |||||||||||||||||||||||||||||    
T  29204642 gtcctcgtgagcttagctcagttggtagg 29204670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 32209904 - 32209860
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||| ||||||||| |||||||| ||||||||||||| |||||||    
T  32209904 tccttgtgagcttacctcagttgataggaacaatacataatatat 32209860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 41677652 - 41677612
Alignment:
Q  46 cgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||||||||| | |||||||| |||||||    
T  41677652 cgtgagcttagctcagttggtaaggacaatacataatatat 41677612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 41763222 - 41763194
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtagg 69  Q
    |||||||||||||||||||||||||||||    
T  41763222 gtcctcgtgagcttagctcagttggtagg 41763194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 11708980 - 11709056
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccacca 117  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||  |||||| || ||||||||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 33445564 - 33445614
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  33445564 gtcctcgtgagcttagctcagttggtaggaacaatgcataatatatacaag 33445614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 27191752 - 27191802
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||| ||||    
T  27191752 gtcctcgtgagcttagctcagttggtaagaacaattcataatatatgcaag 27191802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 39821878 - 39821928
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  39821878 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 39821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 37015909 - 37015853
Alignment:
Q  35 atgtcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||| |||||||||||||||||||||||||||||  ||||| || ||||||| ||||    
T  37015909 atgttagtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 37015853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 7380037 - 7380088
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||| ||| || | |||||||| ||||||||||||    
T  7380037 agtcctcgtgagcttagctcaattgttatggacaatacataatatatacaag 7380088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 13357513 - 13357458
Alignment:
Q  36 tgtcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||| ||||||||||| | ||||| || ||||||| ||||    
T  13357513 tgtcagtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaag 13357458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 6314391 - 6314313
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||||| || | ||||| || || |||| ||||  |||||  |||||||||| |||||||    
T  6314391 agtcctcgtgagcttagctcagttgataaggacaatgcataaaatatgcaaggtccgaaattcgaaccccggccaccac 6314313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 10732842 - 10732792
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||| |||| |||||| ||||||| || ||||||||||||    
T  10732842 gtcctcgtgagcttaactcaattggtatgaacaatgcataatatatacaag 10732792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 11104766 - 11104808
Alignment:
Q  49 gagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||| ||||||||||||||||||| || ||||||||||||    
T  11104766 gagcttaactcagttggtaggaacaatgcataatatatacaag 11104808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 11771700 - 11771777
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||| ||||||||||||||| |||  |||||||| ||||||| ||||  ||| || ||||||| ||||||||||    
T  11771700 agtcctcgtaagcttagctcagttgatagagacaatacataatatatgcaaggtccg-agttcgaacctcgaccaccac 11771777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 29716763 - 29716717
Alignment:
Q  45 tcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| ||||||||||||||||||| || ||||||| ||||    
T  29716763 tcgtgagcttaactcagttggtaggaacaattcataatatatgcaag 29716717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 35682760 - 35682714
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||||||||||||||| | ||||| || |||||||    
T  35682760 agtcctcgtgagcttagctcagttggtacggacaatccataatatat 35682714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 39433404 - 39433454
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||| || |||||||||| || |||| ||||    
T  39433404 gtcctcgtgagcttagctcagttgatatgaacaatacataaaatatgcaag 39433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 43962091 - 43962041
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||| ||||||||||||||||| | |||||||| ||||||| ||||    
T  43962091 gtcctcgtgggcttagctcagttggtaaggacaatacataatatatgcaag 43962041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 44019543 - 44019609
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaacc 107  Q
    |||| ||||| |||||||||||||||| ||||||| || ||||||| ||||  |||||| |||||||    
T  44019543 gtccccgtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccgaagttcgaacc 44019609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 8020304 - 8020337
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaa 74  Q
    |||||||| |||||||||||||||||||||||||    
T  8020304 gtcctcgtaagcttagctcagttggtaggaacaa 8020337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 13575283 - 13575360
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||| ||||||||||||||||| ||||| || || |||| ||||  |||| | ||||||| || |||||||    
T  13575283 gtcctcgtgagtttagctcagttggtagggacaatgcataacatatgcaagttccgaggttcgaacctcggccaccac 13575360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 14303159 - 14303232
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgacca 114  Q
    ||||||||||| ||||||||||||||| | |||||  | ||||||||||||  || | | ||||||||||||||    
T  14303159 gtcctcgtgagtttagctcagttggtatggacaatgtataatatatacaaggtccaaggttcgaaccccgacca 14303232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 17704008 - 17704057
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  17704008 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 17704057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 19163603 - 19163526
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||||||| | ||||| || ||| ||| ||||  |||  | || |||||||||||||||    
T  19163603 gtcctcgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 28420496 - 28420467
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaa 71  Q
    ||||||||||||||||||||||||||||||    
T  28420496 tcctcgtgagcttagctcagttggtaggaa 28420467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 32878655 - 32878700
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||| |||||||||||||||||||||| ||||||| || |||||||    
T  32878655 gtccccgtgagcttagctcagttggtaagaacaatgcataatatat 32878700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 69
Target Start/End: Original strand, 45105692 - 45105721
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtagg 69  Q
    ||||||||||||||||||||||||||||||    
T  45105692 agtcctcgtgagcttagctcagttggtagg 45105721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 7280723 - 7280683
Alignment:
Q  48 tgagcttagctcagttggtaggaacaatacaaaatatatac 88  Q
    ||||||||||||||| |||||||||||| || |||||||||    
T  7280723 tgagcttagctcagtgggtaggaacaatgcataatatatac 7280683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 14975930 - 14975898
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaaca 73  Q
    ||||||||||||||||||||||||||| |||||    
T  14975930 gtcctcgtgagcttagctcagttggtatgaaca 14975898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 27718961 - 27718885
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccacca 117  Q
    |||||||||||||||||||||||| || | ||||| || ||||||| ||||  ||| || || ||| ||||||||||    
T  27718961 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 36910967 - 36911011
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatata 85  Q
    ||||| |||||||||||| ||||||||||||||| ||| ||||||    
T  36910967 gtccttgtgagcttagcttagttggtaggaacaacacataatata 36911011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 37117592 - 37117540
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||| ||| |||||| ||||||| || ||||||| |||||    
T  37117592 agtcctcgtgagcttagatcaattggtatgaacaatgcataatatattcaaga 37117540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 39975485 - 39975529
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||||    
T  39975485 tcctcgtaagcttagctcaattggtaagaacaatacataatatat 39975529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 40512691 - 40512647
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||| ||||||||||||  |||||||| ||||||||||||    
T  40512691 gtgagcttaactcagttggtagagacaatacataatatatacaag 40512647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 40795377 - 40795421
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||| ||||||||||| |||||||||| ||||||| ||||    
T  40795377 gtgagcttaactcagttggtatgaacaatacataatatatgcaag 40795421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 23183676 - 23183736
Alignment:
Q  141 caacattttcacaaaactatcatgaattaaatataaatctagatcataatgatacaacatc 201  Q
    ||||||||||| |||||| |||||||||||||| || |||| |||||||||||||||||||    
T  23183676 caacattttcagaaaactttcatgaattaaataaaactctacatcataatgatacaacatc 23183736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 5352322 - 5352373
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  5352322 agtcctcgtgagcttagctcagttggtaaggacaatacataatatatacaag 5352373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 580995 - 580916
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||| ||||||| | ||||| || || |||| ||||| |||  | ||||||||||||||||||    
T  580995 cagtcctcgtgagcttagctcggttggtatggacaatgcataaaatatgcaagatccggcgttcgaaccccgaccaccac 580916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 39801699 - 39801777
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||||||||||||||||| | ||||| || ||||||| ||||| |||  |  |||||||| ||||||||    
T  39801699 agtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggtacgaaccccaaccaccac 39801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 4098687 - 4098642
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatata 85  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||    
T  4098687 agtcctcgtgagtttagctcagttggtaggaacaatatataatata 4098642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 28200448 - 28200375
Alignment:
Q  45 tcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||| |  ||| | || ||| |||||||||||    
T  28200448 tcgtgagcttaactcagttggtaggaacaatacataatatatgcaaaattcgaggttcaaactccgaccaccac 28200375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 48980481 - 48980530
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||||||||||||||||||| | ||||| || |||||||||||    
T  48980481 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatacaa 48980530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 2622320 - 2622364
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||    
T  2622320 tcctcgtgagcttagcttagttgataggaacaatacataatatat 2622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 5526718 - 5526770
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||||||||| | ||||| || |||||||| ||||    
T  5526718 agtcctcgtgagcttagctcagttggtatggacaatgcataatatatataaga 5526770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 16577929 - 16577877
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| | ||||||||||||||||| |||||||| ||||||| ||||    
T  16577929 cagtcctcgtgggtttagctcagttggtagggacaatacataatatatgcaag 16577877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 16587733 - 16587785
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| | ||||||||||||||||| |||||||| ||||||| ||||    
T  16587733 cagtcctcgtgggtttagctcagttggtagggacaatacataatatatgcaag 16587785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 7476720 - 7476771
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||| |||||||||||| ||||| || ||||||| |||||    
T  7476720 gtcctcgtgagcttagatcagttggtagggacaatgcacaatatatgcaaga 7476771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 10244720 - 10244771
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  10244720 agtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 10244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 2391006 - 2391052
Alignment:
Q  46 cgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||| |||||||||||||||| ||||||| || |||||||||||||    
T  2391006 cgtgaacttagctcagttggtaagaacaatgcataatatatacaaga 2391052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 9819615 - 9819565
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||| ||| ||||||||||||||||||| || ||||||| |||||    
T  9819615 tcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaaga 9819565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 10721540 - 10721490
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||| ||| ||||||||||||||||||| || ||||||| |||||    
T  10721540 tcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaaga 10721490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 14786117 - 14786151
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  14786117 gtcctcgtgagcttagctcagttggtatgaacaat 14786151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 38088084 - 38088034
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | |||| ||| ||||||| ||||    
T  38088084 gtcctcgtgagcttagctcagttggtaaggacaaaacataatatatgcaag 38088034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 46207754 - 46207788
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  46207754 gtcctcgtgagcttagctcagttggtatgaacaat 46207788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 47589620 - 47589586
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  47589620 gtcctcgtgagcttagctcagttggtatgaacaat 47589586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 1120098 - 1120053
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||  | |||||||| |||||||    
T  1120098 gtcctcgtgagcttagctcagttggtgaggacaatacataatatat 1120053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 36341132 - 36341055
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||| |||||||| ||||||||||| ||||||| || || |||||||||  ||| || || |||| ||||||||||    
T  36341132 gtcctcttgagcttaactcagttggtatgaacaatgcataaaatatacaaggtccggagttcaaacctcgaccaccac 36341055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 36803832 - 36803877
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||    
T  36803832 gtcctcgtgagcttagctcagttggtagagacaatgcataatatat 36803877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 40752906 - 40752861
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||| ||| | |||||||| |||||||    
T  40752906 gtcctcgtgagcttagctcagttagtatggacaatacataatatat 40752861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 43539171 - 43539126
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||    
T  43539171 gtccttgtgagcttagctcagttgataggaacaatgcataatatat 43539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 13852007 - 13851979
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtagg 69  Q
    |||||||||||||||||||||||||||||    
T  13852007 gtcctcgtgagcttagctcagttggtagg 13851979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 16537605 - 16537553
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||| ||||||| ||||||||||||||||| | ||| || ||||||||||||    
T  16537605 cagtcatcgtgagtttagctcagttggtagggataatgcataatatatacaag 16537553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 16628057 - 16628109
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||| ||||||| ||||||||||||||||| | ||| || ||||||||||||    
T  16628057 cagtcatcgtgagtttagctcagttggtagggataatgcataatatatacaag 16628109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 18505721 - 18505673
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||||||| ||||| || || |||| |||||    
T  18505721 ctcgtgagcttagctcagttggtagggacaatgcataaaatatgcaaga 18505673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 45051698 - 45051742
Alignment:
Q  48 tgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||| ||||||| || ||| |||||||||    
T  45051698 tgagcttagctcagttggtatgaacaatgcataatgtatacaaga 45051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 10082396 - 10082447
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  10082396 gtcctcgtgaacttagctcagttggtagggacaatacataatatatacaaga 10082447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 11949729 - 11949681
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||    
T  11949729 tcctcgtgagcttagctcagttgataagaacaatacataatatatacaa 11949681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 3527383 - 3527434
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| |||||||||||| ||||| |||||||| ||||||||||||    
T  3527383 agtcctcgtgaacttagctcagttagtagggacaatacataatatatacaag 3527434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 9913893 - 9913944
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||||||||||||| ||||||| || || ||||||||||    
T  9913893 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatacaaga 9913944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 20799461 - 20799411
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 20799411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 40071036 - 40070962
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgacca 114  Q
    |||| ||||||||||| ||||||||||| ||||||| || ||||||| ||||  |||||| || |||||||||||    
T  40071036 agtcatcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccgacca 40070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 50362206 - 50362156
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  50362206 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 50362156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 24665058 - 24664981
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||||||| | | ||| || ||||||| ||||  |||  | ||||||||||||||||||    
T  24665058 gtcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 836293 - 836225
Alignment:
Q  50 agcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||||||||| ||||| |||||||||| ||||  |||| | || ||| |||||||||||    
T  836293 agcttagctcagttggtagggacaatgcaaaatatatgcaaggtccgaggttcaaactccgaccaccac 836225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 3936627 - 3936698
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||| ||||||| || ||||||| ||||  |||  | |||||||||| |||||||    
T  3936627 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaaccccggccaccac 3936698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 8494981 - 8495032
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||| |||||    
T  8494981 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaaga 8495032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 12322666 - 12322717
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  12322666 agtcctcgtgagcttagctcagttggtacggacaatgcataatatatgcaag 12322717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 13984711 - 13984664
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||| |||||||||| ||||||||||||||||||| || |||||||    
T  13984711 cagtccccgtgagcttaactcagttggtaggaacaatgcataatatat 13984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 19908692 - 19908763
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||| ||||||||||| | ||||| || ||||||| ||||  |||| | ||||||||||||||||||    
T  19908692 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccgaggttcgaaccccgaccaccac 19908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 23225859 - 23225910
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||| |||| ||||||||||||||||||| || ||||||| |||||    
T  23225859 gtcctcgtgaacttaactcagttggtaggaacaattcataatatatgcaaga 23225910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 43539807 - 43539854
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||| ||||||||||| |||||||||||| |||||||| |||||||    
T  43539807 cagtccccgtgagcttagttcagttggtagggacaatacataatatat 43539854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 50774567 - 50774618
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||| ||||||  ||||||||| || ||||||||||    
T  50774567 gtcctcgtgagcttagctcaattggtataaacaatacataaaatatacaaga 50774618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 2186400 - 2186350
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  2186400 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 2186350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 74
Target Start/End: Original strand, 3047200 - 3047230
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaa 74  Q
    |||||||||||||||||||||||||||||||    
T  3047200 ctcgtgagcttagctcagttggtaggaacaa 3047230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 7230274 - 7230324
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  7230274 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 7230324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 13121538 - 13121588
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||| |||||||||| ||||| || ||||||| ||||    
T  13121538 gtcctcgtgagcttagcttagttggtagggacaatgcataatatatgcaag 13121588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 23304083 - 23304033
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||  || ||||||| ||||    
T  23304083 gtcctcgtgagcttagctcagttggtagggacaaggcataatatatgcaag 23304033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 35287574 - 35287540
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  35287574 gtcctcgtgagcttagctcagttggtatgaacaat 35287540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 45970773 - 45970723
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||| |||||||||||| |||||| || ||||||| |||||    
T  45970773 tcctcgtgagcttaactcagttggtagaaacaatgcataatatatgcaaga 45970723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 51515131 - 51515097
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaataca 78  Q
    |||||||||||||||||||||| ||||||||||||    
T  51515131 ctcgtgagcttagctcagttggcaggaacaataca 51515097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 52270097 - 52270047
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  52270097 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 52270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 9946421 - 9946498
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||||||| | ||||| || || |||| ||||  |||  | || |||||||||||||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccac 9946498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 11949830 - 11949753
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||| |||||||||||||||||||| | ||||| || ||||||| ||||  |||  | || |||||||||||||||    
T  11949830 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 22164336 - 22164291
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||| |||||| |||||||||||||||| || |||||||    
T  22164336 gtcctcgtgagtttagcttagttggtaggaacaatgcataatatat 22164291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 24079906 - 24079830
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||||||| |||||||||| ||||| || || |||| ||||  ||| || || |||||||||||||||    
T  24079906 gtcctcgtgagcttagcttagttggtagg-acaatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 24079830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 2932114 - 2932162
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||||||||| |||| |||| ||||| || |||||||    
T  2932114 tcagtcctcgtgagcttagctctgttgatagggacaatgcataatatat 2932162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 21318338 - 21318270
Alignment:
Q  23 tcaaacacttgaatgtcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||| ||||| ||  ||||||| ||||||| ||||||||||||| ||||| || ||||||| ||||    
T  21318338 tcaaacaattgaaagtatgtcctcgcgagcttaactcagttggtagggacaatgcataatatatgcaag 21318270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 32139336 - 32139384
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaataca-aaatatatacaag 91  Q
    ||||||||||||||||||||| |||| |||||||| |||||||| ||||    
T  32139336 ctcgtgagcttagctcagttgatagggacaatacataaatatatgcaag 32139384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 34960215 - 34960147
Alignment:
Q  50 agcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||| |||||||||||  |||||| || |||||||| ||||  ||| | ||||||||||||||||||    
T  34960215 agcttaactcagttggtataaacaatgcataatatatataagattcgaggttcgaaccccgaccaccac 34960147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 27934924 - 27934873
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  27934924 gtcctcgtgagcttagctcagttggtaaggacaatacataatatatacaaga 27934873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 9517076 - 9517025
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||| ||||||||||||||| ||||||| || |||||||||||||    
T  9517076 gtcctcgtgagattagctcagttggtatgaacaatgcataatatatacaaga 9517025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 11846390 - 11846441
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||| ||||||| ||||||||||||||| |||||| ||||||||||||    
T  11846390 agtcctcgcgagcttaactcagttggtaggaataatacataatatatacaag 11846441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 30089042 - 30089093
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| |||||||||||||||||| ||||| || ||||||||||||    
T  30089042 agtcctcgtgaacttagctcagttggtagggacaatgcataatatatacaag 30089093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 30125646 - 30125697
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| |||||||||||||||||| ||||| || ||||||||||||    
T  30125646 agtcctcgtgaacttagctcagttggtagggacaatgcataatatatacaag 30125697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 15381626 - 15381672
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||    
T  15381626 agtcctcgtgagcttagctcagttagtagggacaatacataatatat 15381672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 22523079 - 22523029
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||| ||||    
T  22523079 gtcctcgtgagcttagctcagttggtatggacaatacataatatatgcaag 22523029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 24592916 - 24592863
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||| |||||||||||||||||| ||||| || ||||||| ||||    
T  24592916 tcagtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaag 24592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 36171523 - 36171568
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatata 87  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||    
T  36171523 tcctcgtgagcttaactcagttggtagggacaatacataatatata 36171568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 7029459 - 7029407
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||| |||||||||||||||  ||||||||| ||||||| |||||    
T  7029459 agtcctcgtgagattagctcagttggtaaaaacaatacataatatatgcaaga 7029407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 9842271 - 9842235
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9842271 cagtcctcgtgagcttagctcagttggtagggacaat 9842235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 44496764 - 44496716
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||||| | |||||||| ||||||| |||||    
T  44496764 ctcgtgagcttagctcagttggtaaggacaatacataatatatgcaaga 44496716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 2256960 - 2257015
Alignment:
Q  36 tgtcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||| ||||||||||| | ||||| || ||||||| ||||    
T  2256960 tgtcagtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaag 2257015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 9383277 - 9383226
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  9383277 agtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 9383226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 10735899 - 10735848
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||||||| || || || ||||||| ||||    
T  10735899 agtcctcgtgagcttagctcagttggtagggacgatgcataatatatgcaag 10735848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 20565139 - 20565092
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  20565139 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 20565092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 30243243 - 30243294
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| |||||||||||||||||  ||||| || ||||||||||||    
T  30243243 agtcctcgtgaacttagctcagttggtagagacaatgcataatatatacaag 30243294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 35820369 - 35820334
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    |||||||||||||||||||||||||||||| |||||    
T  35820369 agtcctcgtgagcttagctcagttggtagggacaat 35820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 40896573 - 40896502
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccac 115  Q
    ||||||||||||||||||||||||   ||||| || |||||||||||   | |||| |||||||||||||||    
T  40896573 ctcgtgagcttagctcagttggtatagacaatgcataatatatacaaagtctgaagttcgaaccccgaccac 40896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 45032687 - 45032738
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||| |||||    
T  45032687 gtcctcgtgagcttacctcagttggtagggacaatgcataatatatgcaaga 45032738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 3197146 - 3197096
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||| ||||    
T  3197146 gtcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaag 3197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 7042837 - 7042783
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||| |||||||||||||||  | ||||||| ||||||| |||||    
T  7042837 tcagtcctcgtgagattagctcagttggtaaaatcaatacataatatatgcaaga 7042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 7206119 - 7206169
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||  ||||| || ||||||| ||||    
T  7206119 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 7206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 13922700 - 13922650
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    |||| ||||||||||| ||||||||||||| ||||| || |||||||||||    
T  13922700 agtcatcgtgagcttaactcagttggtagggacaatgcataatatatacaa 13922650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 17736787 - 17736821
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  17736787 gtcctcgtgagcttagctcagttggtatgaacaat 17736821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 27244651 - 27244701
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||| |||| ||||| || ||||||| ||||    
T  27244651 gtcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaag 27244701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 31815951 - 31815877
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||| ||||||||||||| ||||| || ||||||| ||||  |||  | || |||||||||||||||    
T  31815951 ctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 35456888 - 35456854
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  35456888 gtcctcgtgagcttagctcagttggtaagaacaat 35456854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 7201501 - 7201546
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||  ||||||| || |||||||    
T  7201501 gtcctcgtgagcttagctcagttggtttgaacaatgcataatatat 7201546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 7413251 - 7413206
Alignment:
Q  46 cgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||| | ||||| || ||||||||||||    
T  7413251 cgtgagcttagctcagttggtaaggacaatgcataatatatacaag 7413206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 8761631 - 8761586
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||| ||||||||||| | |||||||| |||||||    
T  8761631 gtcctcgtgagcttaactcagttggtatggacaatacataatatat 8761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 8775264 - 8775309
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||| ||||||| |||||| |||||| |||||||    
T  8775264 gtcctcgtgagcttaggtcagttgataggaataatacataatatat 8775309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 8788361 - 8788316
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||| ||||||| ||||||| ||||||||||||| |||||||    
T  8788361 gtcctcgtaagcttaggtcagttgataggaacaatacataatatat 8788316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 10156016 - 10156061
Alignment:
Q  46 cgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||| | |||||||| ||||||| ||||    
T  10156016 cgtgagcttagctcagttggtaaggacaatacataatatatgcaag 10156061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 11953944 - 11953985
Alignment:
Q  45 tcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  11953944 tcgtgagctaagctcagttggtagggacaatacataatatat 11953985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 33063980 - 33064057
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||||||||||||| || | ||||| || ||||||| ||||  ||| || |||||| ||| |||||||    
T  33063980 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcgaactccggccaccac 33064057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 44526121 - 44526166
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatata 85  Q
    |||||||||||||||||||||||||||| | ||||| || ||||||    
T  44526121 agtcctcgtgagcttagctcagttggtatggacaatgcataatata 44526166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 13196692 - 13196744
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||| |||| ||||||||||| ||||||| || ||||||| ||||    
T  13196692 cagtcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaag 13196744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 20517017 - 20517061
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||| ||||||||||||||| ||||||| || |||||||    
T  20517017 tcctcgtgagtttagctcagttggtaagaacaatgcataatatat 20517061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 32887356 - 32887404
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||||||| | ||||||||||| || |||| |||||    
T  32887356 ctcgtgagcttagctcagttgattggaacaatacataaaatatgcaaga 32887404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 41566757 - 41566789
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaa 71  Q
    |||||| ||||||||||||||||||||||||||    
T  41566757 cagtccccgtgagcttagctcagttggtaggaa 41566789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 135159 - 135205
Alignment:
Q  45 tcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  135159 tcgtgagcttagctcagttggtaggaacaatacatattatatacaag 135205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 5655374 - 5655329
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  5655374 gtcctcgtgagcttagctcagttggtagggacaatacataatatat 5655329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 9558442 - 9558491
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  9558442 gtcctcgtgagcttagctcggttggtatgaacaatacataatatatacaa 9558491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 4379551 - 4379509
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatat 84  Q
    |||||||||||||| |||||||||||||||||||||| |||||    
T  4379551 tcctcgtgagcttaactcagttggtaggaacaatacataatat 4379509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 10118916 - 10118962
Alignment:
Q  46 cgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||    
T  10118916 cgtgagcttagctcagttggtaagaacaatacataatatatgcaaga 10118962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 21847188 - 21847238
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||| ||||    
T  21847188 gtcctcttgagcttagctcagttggtagggacaatacataatatatgcaag 21847238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 2445293 - 2445370
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||| |||||| |||||||| || ||||||| || |||||||||||||  ||  | ||||||||||||||||||    
T  2445293 gtcctcgtaagcttaactcagttgatatgaacaatgcataatatatacaagattcggggttcgaaccccgaccaccac 2445370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 5632129 - 5632205
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||| |||| ||||||||||||||  | |||||||| ||||  ||  | ||||||||||||||||||    
T  5632129 tcctcgtgagcttaactcaattggtaggaacaatgtataatatatataagattcggcgttcgaaccccgaccaccac 5632205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 8810625 - 8810684
Alignment:
Q  32 tgaatgtcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||| | |||||||||||||||||||||||||||   |||||||| ||||||| ||||    
T  8810625 tgaatgacggtcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaag 8810684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 9581963 - 9582010
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||| |||||||| || || |||||||||    
T  9581963 ctcgtgagcttagctcagttggttggaacaatgcataaaatatacaag 9582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 10780171 - 10780124
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  10780171 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 10780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 14917843 - 14917792
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||| |||||||||||||||||||||| || ||||| ||||||| ||||    
T  14917843 agtcctcatgagcttagctcagttggtagggacgatacataatatatgcaag 14917792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 17151229 - 17151280
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||| |||||||||  |||||||| ||||||| ||||    
T  17151229 agtcctcgtgagcttagctaagttggtagtgacaatacataatatatgcaag 17151280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 20480699 - 20480664
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    |||||||||||||||| |||||||||||||||||||    
T  20480699 agtcctcgtgagcttaactcagttggtaggaacaat 20480664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 33938743 - 33938696
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||| ||||||| || ||||||| ||||    
T  33938743 ctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaag 33938696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 8217377 - 8217427
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||| ||||    
T  8217377 gtcctcgtgagcttagctcagctggtagacacaatacataatatatgcaag 8217427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 8916541 - 8916491
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||| | ||||||||||||| |||||||| ||||||| ||||    
T  8916541 gtcctcgtgagctaaactcagttggtagggacaatacataatatatgcaag 8916491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 9111041 - 9111111
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccga 111  Q
    |||||||||||||||| |||||||||| ||||||| || ||||||| ||||  |||  | |||||||||||    
T  9111041 gtcctcgtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaaccccga 9111111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 9444951 - 9444985
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  9444951 gtcctcgtgagcttagctcagttggtatgaacaat 9444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 11129677 - 11129643
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    |||||| ||||||||||||||||||||||||||||    
T  11129677 gtcctcatgagcttagctcagttggtaggaacaat 11129643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 13496109 - 13496183
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgacca 114  Q
    |||||||||||||||| |||||||| || ||||||| || ||||||| ||||  ||| || || |||||||||||    
T  13496109 agtcctcgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccggagttcaaaccccgacca 13496183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 32053782 - 32053832
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  32053782 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 32053832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 34701141 - 34701191
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||| ||||| |||||||||||||||||| || ||||||| ||||    
T  34701141 gtcctcgtgaacttagttcagttggtaggaacaatgcataatatatgcaag 34701191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 788860 - 788937
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||| ||||||||||| | ||||| || ||||||| ||||   || || || |||||||||||||||    
T  788860 gtcctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggttcggagttcaaaccccgaccaccac 788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 9311997 - 9311952
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||| ||||||||||| ||| |||||| |||||||    
T  9311997 gtcctcgtgagcttaactcagttggtatgaataatacataatatat 9311952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 16390423 - 16390468
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||| ||||||||||||| ||||| || |||||||    
T  16390423 gtcctcgtgagcttacctcagttggtagggacaatgcataatatat 16390468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 18256874 - 18256927
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| || | ||||| || ||||||| ||||    
T  18256874 tcagtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaag 18256927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 20744133 - 20744182
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 20744182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 26522472 - 26522517
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||||||| | ||||| || |||||||||||||    
T  26522472 gtgagcttagctcagttggtaaggacaatgcataatatatacaaga 26522517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 28951394 - 28951443
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||| ||||    
T  28951394 tcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaag 28951443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 331955 - 331903
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||| ||||||||||||  ||||| || ||||||| ||||    
T  331955 cagtcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaag 331903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 9392737 - 9392685
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||| || ||| ||| || ||||||| ||||    
T  9392737 cagtcctcgtgagcttagctcagttgttatgaaaaatgcataatatatgcaag 9392685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 10320500 - 10320464
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  10320500 cagtcctcgtgagcttaactcagttggtaagaacaat 10320464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 27721742 - 27721697
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||||||||||| || |||||||    
T  27721742 gtcctcgtgagcttagctcagttggtaggaacaatgcataatatat 27721697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 5107310 - 5107236
Alignment:
Q  43 cctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccacca 117  Q
    ||||||||||||| ||||||||||| ||| ||| || ||||||| ||||  |||| | |||||||||||||||||    
T  5107310 cctcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccacca 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 6489001 - 6489051
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 6489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 13864341 - 13864415
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||| ||||||||||| |||||||||| ||||||| ||||  |||  | || |||||||||||||||    
T  13864341 ctcgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 15889405 - 15889455
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 15889455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 20370197 - 20370147
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| | ||| || ||||||||||||    
T  20370197 gtcctcgtgagcttagctcagttggtagggataatgcataatatatacaag 20370147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 22619869 - 22619919
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||||||| ||||||| || || ||||||||||    
T  22619869 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatatacaaga 22619919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 34436845 - 34436895
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  34436845 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 34436895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 5485180 - 5485225
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||||| ||||| || |||||||    
T  5485180 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 5485225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 42663271 - 42663222
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||| ||| |||||||| ||||||||||||| |||||||||||    
T  42663271 gtcctcgtgagtttaactcagttgttaggaacaatacataatatatacaa 42663222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 3630653 - 3630688
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaata 76  Q
    |||||||||||||||||||||||||| |||||||||    
T  3630653 gtcctcgtgagcttagctcagttggttggaacaata 3630688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 18589935 - 18589884
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||||| ||||    
T  18589935 agtcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaag 18589884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 20365535 - 20365488
Alignment:
Q  45 tcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||| |||||||||||||| |||||||| || |||||||||||||    
T  20365535 tcgtgagtttagctcagttggtcggaacaatgcataatatatacaaga 20365488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 22297382 - 22297429
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||| |||||||||||||||| |||||||||| ||||||| ||||    
T  22297382 ctcgtgaccttagctcagttggtaagaacaatacataatatatgcaag 22297429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 75
Target Start/End: Complemental strand, 31591601 - 31591570
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaat 75  Q
    ||||||||||||||||||||||||||||||||    
T  31591601 ctcgtgagcttagctcagttggtaggaacaat 31591570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 75
Target Start/End: Original strand, 33133632 - 33133667
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    |||||||||||||||||||||||||||||| |||||    
T  33133632 agtcctcgtgagcttagctcagttggtagggacaat 33133667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 7336382 - 7336348
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaat 75  Q
    |||||||||||||||||||||||| ||||||||||    
T  7336382 gtcctcgtgagcttagctcagttgataggaacaat 7336348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 10199013 - 10199059
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatata 87  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||||    
T  10199013 gtcctcgtgagcttagctcagttggtatggacaatgcataatatata 10199059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 17210776 - 17210726
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||| ||||    
T  17210776 gtcctcgtgagcttagctcagttggtagggacagtgcataatatatgcaag 17210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 19759923 - 19759973
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||| |||||||| ||||| || ||||||| ||||    
T  19759923 gtcctcgtgagcttagctcaattggtaggtacaatgcataatatatgcaag 19759973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 20175720 - 20175770
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||||||| | |||||  | |||||||||||||    
T  20175720 tcctcgtgagcttagctcagttggtatggacaatgtataatatatacaaga 20175770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 20211274 - 20211324
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||| ||||||||||||| | |||||| ||||||| ||||    
T  20211274 gtcctcgtgagcttatctcagttggtagggataatacataatatatgcaag 20211324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 20927639 - 20927689
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccga 97  Q
    ||||||||||||||||||||| | |||||||| ||||||| ||||| ||||    
T  20927639 gtgagcttagctcagttggtatggacaatacataatatatgcaagatccga 20927689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 36321561 - 36321511
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  36321561 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 36321511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 37932324 - 37932374
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  37932324 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 37932374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 6624770 - 6624847
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||||| | | ||||| || ||||||| ||||  |||  | |||||||||| |||||||    
T  6624770 gtcctcgtgagcttagctcagttggcatggacaatgcataatatatgcaaggtccggggttcgaaccccggccaccac 6624847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 14880406 - 14880455
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||||||| ||||||||||| ||||||| || || ||||||||    
T  14880406 gtcctcgtgagcttaactcagttggtatgaacaatgcagaaaatatacaa 14880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 16701647 - 16701614
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaat 75  Q
    |||||||||||||||||||||||||||| |||||    
T  16701647 tcctcgtgagcttagctcagttggtagggacaat 16701614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 28207126 - 28207203
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||||||| | ||||| || || |||| ||||  |||| | ||||| |||| |||||||    
T  28207126 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccgaggttcgaatcccggccaccac 28207203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 33369480 - 33369443
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaataca 78  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  33369480 gtcctcgtgagcttaactcagttggtatgaacaataca 33369443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 36422491 - 36422524
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaa 74  Q
    |||| |||||||||||||||||||||||||||||    
T  36422491 gtccccgtgagcttagctcagttggtaggaacaa 36422524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 41633678 - 41633633
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||| |||||||||||||| |||||||||| || ||||||||||    
T  41633678 gtgagcatagctcagttggtatgaacaatacataaaatatacaaga 41633633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 41939329 - 41939280
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    |||||||||||||||||||| |||||| ||| ||| || |||||||||||    
T  41939329 gtcctcgtgagcttagctcaattggtatgaataatgcataatatatacaa 41939280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 9699922 - 9699962
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaa 81  Q
    ||||||||||||||| |||||||| |||||||||| |||||    
T  9699922 gtcctcgtgagcttaactcagttgataggaacaatgcaaaa 9699962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 17861974 - 17862018
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||| ||||||||||||||||| ||||| || |||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatatat 17862018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 31625581 - 31625549
Alignment:
Q  60 agttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||||| |||||||||||||    
T  31625581 agttggtaggaacaatacacaatatatacaaga 31625549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 40730264 - 40730216
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatata 87  Q
    |||||||||||||||||||| ||||| || ||||||| || ||||||||    
T  40730264 cagtcctcgtgagcttagctaagttgatatgaacaatgcataatatata 40730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 33223859 - 33223912
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||| ||||    
T  33223859 tcagtcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaag 33223912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 10295184 - 10295219
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtaggaacaa 74  Q
    ||||||||||||||||||||||||||||||||||||    
T  10295184 cagtcctcgtgagcttagctcagttggtaggaacaa 10295219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 18870793 - 18870742
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||| ||||    
T  18870793 agtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 18870742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 27185474 - 27185521
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  27185474 ctcgtgagcttagctcagttggtagggacaatacataatatatgcaag 27185521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 43345074 - 43345024
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  43345074 gtcctcgtgagtttagctcagttggtatgaacaatacataatatatgcaag 43345024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 1757736 - 1757691
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||    
T  1757736 gtcctcgtgagcttaactcagttggtaggaacaatgcataatatat 1757691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 7868716 - 7868761
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||    
T  7868716 gtcctcgtgagcttagctcagttggtaagaacaatgcataatatat 7868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 22722396 - 22722473
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||||||| ||| ||||||| || || |||| ||||  |||| | || |||||||||||||||    
T  22722396 gtcctcgtgagcttagctcagttagtatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccaccac 22722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 35863881 - 35863830
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||| |||||||||||||||||| | |||||||| ||||||| ||||    
T  35863881 agtcctcgtaagcttagctcagttggtaaggacaatacataatatatgcaag 35863830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 43490481 - 43490434
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||||||||||||| ||||||| || ||||||| ||||    
T  43490481 ctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaag 43490434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 47255753 - 47255804
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||||||| ||||| |||||||| | ||||||| |||||    
T  47255753 gtcctcgtgagcttagctcagctggtatgaacaatatataatatatgcaaga 47255804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 1149136 - 1149086
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  1149136 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 1149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 7938722 - 7938768
Alignment:
Q  45 tcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||| |||||||||| ||||||| || ||||||||||||    
T  7938722 tcgtgagcttagttcagttggtatgaacaatgcataatatatacaag 7938768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 10498762 - 10498712
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  10498762 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 10498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 16980421 - 16980371
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||| ||||    
T  16980421 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 16980371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 34268647 - 34268606
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  34268647 ctcgtgagctt-gctcagttggtaggaacaatacataatatat 34268606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 36483670 - 36483720
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||||||||||| |||||||||| ||| ||||| || ||||||||||||    
T  36483670 gtcctcgtgagctttgctcagttggcagggacaatgcataatatatacaag 36483720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 38869574 - 38869508
Alignment:
Q  52 cttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||||| ||||||| || ||||||||||||| |||| | ||||| | ||| ||||||    
T  38869574 cttagctcagttggtaagaacaatgcataatatatacaagatccgaggttcgaaactcgaacaccac 38869508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 44447228 - 44447186
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaata 83  Q
    |||||||||||||||||| |||||||| ||||||| |||||||    
T  44447228 gtcctcgtgagcttagcttagttggtatgaacaatgcaaaata 44447186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 69
Target Start/End: Original strand, 44764717 - 44764747
Alignment:
Q  39 cagtcctcgtgagcttagctcagttggtagg 69  Q
    |||||||||||||||||||||||||||||||    
T  44764717 cagtcctcgtgagcttagctcagttggtagg 44764747  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 2151055 - 2151100
Alignment:
Q  42 tcctcgtgagcttagctcagttggtaggaacaatacaaaatatata 87  Q
    ||||||||||| |||||||||||||||| ||||| || ||||||||    
T  2151055 tcctcgtgagcgtagctcagttggtagggacaatgcataatatata 2151100  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 2496546 - 2496595
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatata 87  Q
    ||||||||||||||||||| ||||||| || ||||||| || ||||||||    
T  2496546 tcagtcctcgtgagcttagttcagttgctatgaacaatgcataatatata 2496595  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 7464558 - 7464513
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||| ||||||||||||| ||||| || |||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatat 7464513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 17755123 - 17755160
Alignment:
Q  49 gagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  17755123 gagcttagctcagttgataggaacaatacataatatat 17755160  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 19056443 - 19056480
Alignment:
Q  49 gagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  19056443 gagcttagctcagttgataggaacaatacataatatat 19056480  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 24273621 - 24273694
Alignment:
Q  45 tcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||||||| | ||||||||| || ||||||| ||||  | || | | ||||||||||||||||    
T  24273621 tcgtgagcttagctcagtttggaggaacaattcataatatatgcaaggtctgaggtttgaaccccgaccaccac 24273694  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 28244171 - 28244094
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||| ||||||||||| ||||||| || || |||| ||||  |||  | ||||||||||| ||||||    
T  28244171 gtcctcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggggttcgaaccccgatcaccac 28244094  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 28918957 - 28918912
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||||||||||||| ||||||||| ||||| || |||||||    
T  28918957 gtcctcgtgagcttagctcggttggtaggtacaatgcataatatat 28918912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 51250300 - 51250223
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    ||||||||||||||| ||||||||||| | |||||  | ||||||| |||| || |||| || |||||||| ||||||    
T  51250300 gtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaaggcctgaagttcaaaccccgatcaccac 51250223  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 6901515 - 6901487
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaat 75  Q
    |||||||||||||||||||||||||||||    
T  6901515 gtgagcttagctcagttggtaggaacaat 6901487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 8113624 - 8113552
Alignment:
Q  46 cgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||||||||||||||| | ||||| || ||||||| ||||| |||  | ||||| |||| |||||||    
T  8113624 cgtgagcttagctcagttggtaaggacaatgcataatatatgcaagatccgcggttcgaatcccggccaccac 8113552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 8831409 - 8831361
Alignment:
Q  44 ctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||| |||||||||||||||||| | |||||||| ||||||| |||||    
T  8831409 ctcgtaagcttagctcagttggtatgtacaatacataatatatgcaaga 8831361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 10922370 - 10922298
Alignment:
Q  46 cgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccaccac 118  Q
    |||||||||| ||||||||||||| ||||| || ||||||| ||||| |||  | || ||||||||| |||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatatatgcaagatccggggttcaaaccccgactaccac 10922298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 13800667 - 13800711
Alignment:
Q  47 gtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    ||||||||||||||||||||| ||||||| || ||||||| ||||    
T  13800667 gtgagcttagctcagttggtaagaacaatgcataatatatgcaag 13800711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 34899091 - 34899167
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgaccacca 117  Q
    |||||||||| |||||||||||| ||||| ||||| || ||||||| ||||  |||  | || ||||||||||||||    
T  34899091 gtcctcgtgatcttagctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 38387965 - 38388017
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    ||||||||||||||||||||||||| |||  ||||| || ||||||| |||||    
T  38387965 agtcctcgtgagcttagctcagttgatagtgacaatgcataatatatgcaaga 38388017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 47471660 - 47471612
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||||||| |||||||||||||||||||| | ||||| ||||| ||||    
T  47471660 tcagtcctcatgagcttagctcagttggtatgtacaatgcaaaaaatat 47471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 5418 - 5470
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||| |||||    
T  5418 agtcctcgtgagcttagctcagttggtaagaacaatgcataatatatccaaga 5470  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 223151 - 223203
Alignment:
Q  40 agtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaaga 92  Q
    |||||||||||||||||||||||||||| | |||||||| || |||| |||||    
T  223151 agtcctcgtgagcttagctcagttggtatggacaatacataaaatatgcaaga 223203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 3126 - 3185
Alignment:
Q  32 tgaatgtcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaag 91  Q
    |||||| | |||||||||||||||||||||||||||   |||||||| ||||||| ||||    
T  3126 tgaatgacggtcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaag 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 8240 - 8167
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaagacccgaagctcgaaccccgacca 114  Q
    ||||| ||||||||||||| ||||||| | |||||| | ||||||||||||| |||  | || |||||||||||    
T  8240 gtcctagtgagcttagctcggttggtaaggacaatagataatatatacaagatccggcgttcaaaccccgacca 8167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 63856 - 63905
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||| ||||||||||||||||| |||||  | |||||||||||    
T  63856 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaa 63905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 71188 - 71237
Alignment:
Q  41 gtcctcgtgagcttagctcagttggtaggaacaatacaaaatatatacaa 90  Q
    ||||||||||| ||||||||||||||||| |||||  | |||||||||||    
T  71188 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaa 71237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 35998 - 35950
Alignment:
Q  38 tcagtcctcgtgagcttagctcagttggtaggaacaatacaaaatatat 86  Q
    ||||| ||||||||||||||||||||| |||| ||||| || |||||||    
T  35998 tcagttctcgtgagcttagctcagttgatagggacaatgcacaatatat 35950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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