View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1485_high_14 (Length: 265)
Name: NF1485_high_14
Description: NF1485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1485_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 33176259 - 33176022
Alignment:
| Q |
18 |
ttttgaatatgaaattctaattaattggaagcattgtttgtgcatccacaaatagttcattacacatttaatgtatagtgatctagnnnnnnntattaca |
117 |
Q |
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| T |
33176259 |
ttttgaatatgaaattctaattaattggaagcattgtttgtgcatccacaaatagttcattacacatttattgtatagtgatctagaaaaaaatattaca |
33176160 |
T |
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| Q |
118 |
ttgatttgcatcaaataaattaaacatgtgaacttacgttcattagcatctatcaaatgaagtcattcatggcacattgaagtggctaagattccaacaa |
217 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33176159 |
ttgagttgcatcaaataaattaaacatgtgaacttacgttcattagcatctatcaaatgaagtcattcatggcacattgaagtggctaagattccaacaa |
33176060 |
T |
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| Q |
218 |
attcatgtcacatgtacaatatactgcacttacctttg |
255 |
Q |
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||||||||||||||||||||||||| |||||||||||| |
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| T |
33176059 |
attcatgtcacatgtacaatatactacacttacctttg |
33176022 |
T |
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