View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1485_low_31 (Length: 215)
Name: NF1485_low_31
Description: NF1485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1485_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 41374527 - 41374359
Alignment:
| Q |
21 |
tgagtaaatgagaataaacaagccatttagcagtgaccacatcaatagttcatgaaaccagcaaaaagccaaaaactaataaagaacaatcatacagaga |
120 |
Q |
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| T |
41374527 |
tgagtaaatgagaataaacaagccatttagcagtgaccacatcaatagttcatgaaaccagcaaaaagccaaaaactaataaagaacaatcatacagaga |
41374428 |
T |
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| Q |
121 |
atcaaaaataaatactagttcctgaaacaaaactggaatctaatgccaaatactcgtaccggcccctaa |
189 |
Q |
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| T |
41374427 |
atcaaaaataaatacgagttcctgaaacaaaactggaatctaatgccaaatactcgtaccggcccctaa |
41374359 |
T |
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