View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14861_high_16 (Length: 326)
Name: NF14861_high_16
Description: NF14861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14861_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 32853463 - 32853743
Alignment:
| Q |
28 |
tattctctcaaattagatagctataatgtcataattgaatgtgttcttattcttctacattcaagaatgtttcacaaacagttacttcaacaagaattta |
127 |
Q |
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| T |
32853463 |
tattctctcaaaatagataactataatgtcataattgaatgtattcttattcttc---attcaagaatgtttcacaaacagttacttcaacaagaattta |
32853559 |
T |
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| Q |
128 |
tttaagaaaataaaaaagcattagtgaaagtataaaaagtaaagggtacatacccgagaaatgagatcatcagcaagggccaaatgagttctgcagaatt |
227 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32853560 |
tttaagaaaataaaaaagcattagtgaaagtataaaaagtaaagggtacatacccgagaaatgagatcatcagcaagggccaaatgagttctgcagaatt |
32853659 |
T |
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| Q |
228 |
tgcatctatagaacctgccctccagctcaaccacaaagattcttcccattttctctcacttcaaaagggaatggaagtttcaga |
311 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32853660 |
tgcatctataggacctgccctccagctcaaccacaaagattcttcccattttctctcacttcaaaagggaatggaagtttcaga |
32853743 |
T |
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