View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14861_low_14 (Length: 335)

Name: NF14861_low_14
Description: NF14861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14861_low_14
NF14861_low_14
[»] chr2 (64 HSPs)
chr2 (143-321)||(4740041-4740220)
chr2 (4-142)||(11965839-11965977)
chr2 (1-142)||(36587358-36587497)
chr2 (1-142)||(31578477-31578618)
chr2 (1-142)||(37316702-37316843)
chr2 (5-142)||(26480977-26481114)
chr2 (6-139)||(30831802-30831935)
chr2 (1-70)||(34945050-34945119)
chr2 (5-143)||(44239083-44239221)
chr2 (5-146)||(37731083-37731224)
chr2 (1-73)||(18254166-18254238)
chr2 (38-138)||(14877069-14877169)
chr2 (1-70)||(6511293-6511362)
chr2 (1-70)||(9647174-9647243)
chr2 (88-152)||(2427876-2427940)
chr2 (1-76)||(32944457-32944532)
chr2 (1-140)||(18510718-18510857)
chr2 (2-139)||(8847531-8847669)
chr2 (1-70)||(9207632-9207701)
chr2 (1-70)||(43057107-43057176)
chr2 (1-73)||(41042296-41042368)
chr2 (5-73)||(41195630-41195698)
chr2 (38-138)||(14871951-14872051)
chr2 (1-64)||(29449254-29449317)
chr2 (1-63)||(7084681-7084743)
chr2 (1-63)||(9990733-9990795)
chr2 (2-67)||(2076612-2076677)
chr2 (1-54)||(9760060-9760113)
chr2 (5-70)||(19109053-19109118)
chr2 (1-70)||(43487421-43487490)
chr2 (4-64)||(9194286-9194346)
chr2 (1-114)||(37003653-37003766)
chr2 (1-64)||(19843527-19843590)
chr2 (2-69)||(22416256-22416323)
chr2 (1-60)||(36774581-36774640)
chr2 (1-67)||(14328424-14328490)
chr2 (1-67)||(40700238-40700304)
chr2 (1-70)||(42091464-42091533)
chr2 (1-64)||(6646866-6646929)
chr2 (1-69)||(19916698-19916766)
chr2 (1-65)||(27490695-27490759)
chr2 (1-63)||(8848664-8848724)
chr2 (1-60)||(10472117-10472176)
chr2 (1-64)||(12889798-12889860)
chr2 (1-64)||(36802939-36803001)
chr2 (19-69)||(3838841-3838891)
chr2 (5-67)||(5361840-5361902)
chr2 (5-67)||(7258524-7258586)
chr2 (33-75)||(7698245-7698287)
chr2 (1-67)||(17395039-17395104)
chr2 (1-67)||(34134734-34134799)
chr2 (1-67)||(39147808-39147874)
chr2 (2-60)||(40937034-40937091)
chr2 (1-59)||(42372522-42372580)
chr2 (5-67)||(44977462-44977524)
chr2 (1-70)||(1248728-1248797)
chr2 (2-59)||(2221037-2221093)
chr2 (1-54)||(4138161-4138214)
chr2 (1-74)||(13711322-13711395)
chr2 (34-67)||(19642673-19642706)
chr2 (2-70)||(21611620-21611686)
chr2 (35-67)||(14871715-14871747)
chr2 (15-63)||(32477388-32477436)
chr2 (1-65)||(34119617-34119680)
[»] chr7 (62 HSPs)
chr7 (1-142)||(12007073-12007214)
chr7 (1-143)||(29723811-29723955)
chr7 (2-142)||(27570387-27570527)
chr7 (1-149)||(13152635-13152784)
chr7 (1-142)||(34978339-34978480)
chr7 (1-142)||(45419948-45420089)
chr7 (1-143)||(32777593-32777735)
chr7 (9-143)||(37352161-37352295)
chr7 (30-142)||(15325527-15325639)
chr7 (2-139)||(28249460-28249597)
chr7 (38-144)||(2008717-2008823)
chr7 (1-142)||(33845085-33845226)
chr7 (1-70)||(44189270-44189339)
chr7 (1-142)||(26749047-26749188)
chr7 (9-144)||(43807698-43807833)
chr7 (1-63)||(43942679-43942741)
chr7 (5-144)||(46880949-46881088)
chr7 (1-139)||(21103055-21103193)
chr7 (1-139)||(43081780-43081918)
chr7 (5-64)||(40854620-40854679)
chr7 (1-67)||(31445360-31445426)
chr7 (1-140)||(33057422-33057561)
chr7 (1-67)||(35098666-35098732)
chr7 (1-67)||(41189506-41189572)
chr7 (6-63)||(4292475-4292532)
chr7 (1-74)||(17945110-17945183)
chr7 (5-70)||(24614276-24614341)
chr7 (1-67)||(30941428-30941498)
chr7 (9-70)||(38956578-38956639)
chr7 (1-70)||(41989702-41989771)
chr7 (1-73)||(43025382-43025454)
chr7 (30-114)||(3148798-3148882)
chr7 (1-64)||(35822940-35823003)
chr7 (9-64)||(46578101-46578156)
chr7 (1-76)||(47448869-47448944)
chr7 (1-67)||(10700148-10700214)
chr7 (9-67)||(24532905-24532963)
chr7 (1-67)||(35072325-35072391)
chr7 (1-67)||(42584845-42584911)
chr7 (1-74)||(33776402-33776475)
chr7 (1-70)||(44895532-44895601)
chr7 (1-60)||(7817680-7817737)
chr7 (1-64)||(35586738-35586801)
chr7 (1-65)||(41018706-41018770)
chr7 (1-60)||(1471261-1471319)
chr7 (33-72)||(19643392-19643431)
chr7 (1-60)||(46829522-46829580)
chr7 (2-60)||(11564937-11564994)
chr7 (9-67)||(34507168-34507226)
chr7 (1-59)||(35452544-35452601)
chr7 (9-75)||(36703826-36703892)
chr7 (1-67)||(41430114-41430180)
chr7 (1-67)||(48062099-48062165)
chr7 (2-67)||(17002380-17002445)
chr7 (1-73)||(22925241-22925311)
chr7 (5-70)||(40112914-40112979)
chr7 (1-64)||(3937089-3937150)
chr7 (1-76)||(22605402-22605475)
chr7 (1-64)||(33224866-33224929)
chr7 (7-67)||(36352547-36352607)
chr7 (1-64)||(37899178-37899241)
chr7 (1-64)||(37899366-37899429)
[»] chr4 (77 HSPs)
chr4 (1-142)||(51255789-51255930)
chr4 (1-142)||(38519836-38519977)
chr4 (1-142)||(18315980-18316121)
chr4 (1-142)||(39158148-39158289)
chr4 (1-142)||(5386415-5386556)
chr4 (1-138)||(54000741-54000878)
chr4 (2-142)||(29227130-29227270)
chr4 (1-142)||(51577657-51577798)
chr4 (5-140)||(41262234-41262369)
chr4 (5-73)||(40348840-40348908)
chr4 (1-76)||(5932717-5932792)
chr4 (5-140)||(52204897-52205032)
chr4 (1-70)||(10250475-10250544)
chr4 (5-70)||(37297095-37297160)
chr4 (5-70)||(39440530-39440595)
chr4 (1-70)||(46634142-46634211)
chr4 (1-70)||(51986084-51986153)
chr4 (5-143)||(55266072-55266210)
chr4 (5-142)||(14443245-14443382)
chr4 (9-142)||(22813609-22813742)
chr4 (1-76)||(149438-149513)
chr4 (5-75)||(1816630-1816700)
chr4 (5-144)||(26600084-26600223)
chr4 (9-67)||(37997304-37997362)
chr4 (2-136)||(2738161-2738295)
chr4 (1-73)||(2268464-2268536)
chr4 (9-69)||(11068738-11068798)
chr4 (2-70)||(43175027-43175095)
chr4 (1-64)||(19232099-19232162)
chr4 (5-142)||(50506440-50506572)
chr4 (1-64)||(50890039-50890102)
chr4 (1-67)||(50831718-50831784)
chr4 (1-70)||(23369292-23369361)
chr4 (1-70)||(31641525-31641594)
chr4 (1-114)||(36130268-36130381)
chr4 (1-73)||(50608581-50608653)
chr4 (1-64)||(5622500-5622563)
chr4 (5-64)||(7632427-7632486)
chr4 (38-138)||(10146980-10147080)
chr4 (1-67)||(24045287-24045351)
chr4 (2-73)||(27051043-27051114)
chr4 (1-64)||(36123425-36123488)
chr4 (1-64)||(38338888-38338950)
chr4 (1-63)||(38792858-38792918)
chr4 (1-64)||(39606009-39606072)
chr4 (1-64)||(49585037-49585100)
chr4 (1-67)||(5249911-5249977)
chr4 (13-67)||(16019531-16019585)
chr4 (1-67)||(28458340-28458405)
chr4 (5-63)||(31574906-31574964)
chr4 (5-63)||(36177952-36178010)
chr4 (44-138)||(19651810-19651904)
chr4 (88-141)||(21014127-21014180)
chr4 (1-70)||(26732267-26732336)
chr4 (1-70)||(26910244-26910313)
chr4 (1-70)||(29531566-29531635)
chr4 (2-67)||(50721707-50721772)
chr4 (1-142)||(2004076-2004217)
chr4 (1-64)||(32546324-32546385)
chr4 (1-69)||(38134395-38134463)
chr4 (1-65)||(44257694-44257758)
chr4 (1-64)||(336773-336836)
chr4 (5-64)||(24575817-24575876)
chr4 (1-64)||(25123237-25123300)
chr4 (1-67)||(29175269-29175333)
chr4 (1-60)||(37514102-37514160)
chr4 (1-52)||(42490951-42491002)
chr4 (1-60)||(42815447-42815505)
chr4 (5-63)||(38381043-38381101)
chr4 (30-76)||(43902641-43902687)
chr4 (1-74)||(24509343-24509416)
chr4 (13-70)||(27965041-27965098)
chr4 (1-66)||(29891887-29891952)
chr4 (1-74)||(52895270-52895343)
chr4 (5-65)||(31559585-31559645)
chr4 (1-65)||(31657689-31657752)
chr4 (1-64)||(40693590-40693651)
[»] chr1 (73 HSPs)
chr1 (1-142)||(48983555-48983696)
chr1 (1-142)||(47642494-47642635)
chr1 (1-145)||(48858866-48859010)
chr1 (1-142)||(4213115-4213256)
chr1 (1-138)||(7918953-7919090)
chr1 (1-143)||(5771630-5771776)
chr1 (1-142)||(40439727-40439868)
chr1 (1-142)||(42468635-42468776)
chr1 (1-70)||(649811-649880)
chr1 (1-70)||(33100850-33100919)
chr1 (1-143)||(38878787-38878929)
chr1 (1-70)||(8350158-8350225)
chr1 (1-70)||(37685373-37685440)
chr1 (1-70)||(37700078-37700145)
chr1 (1-70)||(27465017-27465086)
chr1 (1-70)||(35369742-35369811)
chr1 (2-66)||(12657265-12657329)
chr1 (1-70)||(51718586-51718655)
chr1 (2-70)||(31088224-31088292)
chr1 (2-70)||(37274993-37275061)
chr1 (1-64)||(9987994-9988057)
chr1 (1-64)||(34818010-34818073)
chr1 (1-64)||(37619586-37619649)
chr1 (1-64)||(44519117-44519180)
chr1 (5-67)||(8846020-8846082)
chr1 (1-67)||(9566923-9566989)
chr1 (1-108)||(17082664-17082771)
chr1 (1-67)||(50775119-50775185)
chr1 (1-70)||(23645453-23645522)
chr1 (1-76)||(24806177-24806250)
chr1 (1-64)||(29359681-29359742)
chr1 (1-64)||(12999788-12999851)
chr1 (1-67)||(45065864-45065930)
chr1 (1-64)||(49570039-49570102)
chr1 (1-60)||(52437537-52437596)
chr1 (5-67)||(15083013-15083075)
chr1 (1-67)||(17652671-17652737)
chr1 (1-70)||(3851200-3851269)
chr1 (1-70)||(4857953-4858022)
chr1 (1-62)||(15470024-15470085)
chr1 (1-70)||(50726208-50726277)
chr1 (1-73)||(14983815-14983887)
chr1 (1-73)||(19055716-19055788)
chr1 (1-60)||(10890016-10890074)
chr1 (1-64)||(33054054-33054116)
chr1 (1-64)||(35136887-35136949)
chr1 (33-76)||(41070897-41070940)
chr1 (1-60)||(46281479-46281537)
chr1 (11-70)||(46300657-46300715)
chr1 (1-60)||(47820470-47820529)
chr1 (1-64)||(48220110-48220172)
chr1 (1-60)||(48326010-48326069)
chr1 (1-64)||(49446763-49446826)
chr1 (9-67)||(50932356-50932412)
chr1 (1-67)||(4466737-4466803)
chr1 (1-67)||(14442302-14442368)
chr1 (1-67)||(30745029-30745095)
chr1 (1-67)||(30766480-30766546)
chr1 (6-70)||(2571681-2571746)
chr1 (9-74)||(6340776-6340840)
chr1 (1-70)||(26469401-26469470)
chr1 (13-74)||(33070657-33070718)
chr1 (1-70)||(37985346-37985415)
chr1 (1-74)||(43560247-43560320)
chr1 (1-70)||(44914532-44914601)
chr1 (33-70)||(45333785-45333822)
chr1 (2-67)||(49647113-49647177)
chr1 (1-74)||(49660222-49660295)
chr1 (1-73)||(26021033-26021104)
chr1 (94-142)||(27742745-27742793)
chr1 (1-64)||(30536034-30536095)
chr1 (5-73)||(48470685-48470753)
chr1 (1-65)||(51080055-51080119)
[»] chr3 (71 HSPs)
chr3 (1-142)||(29525907-29526047)
chr3 (1-142)||(4494124-4494265)
chr3 (1-143)||(34307427-34307569)
chr3 (21-142)||(32145873-32145994)
chr3 (33-139)||(39713927-39714033)
chr3 (2-134)||(9692769-9692901)
chr3 (1-139)||(27168572-27168710)
chr3 (2-142)||(31104708-31104848)
chr3 (1-70)||(5114120-5114189)
chr3 (1-70)||(38926670-38926739)
chr3 (1-70)||(41505533-41505602)
chr3 (1-73)||(288768-288840)
chr3 (1-67)||(42358601-42358667)
chr3 (5-142)||(41443078-41443215)
chr3 (5-67)||(6178388-6178450)
chr3 (2-145)||(34456834-34456977)
chr3 (1-70)||(5244271-5244340)
chr3 (1-70)||(16969526-16969595)
chr3 (5-70)||(20547950-20548015)
chr3 (5-70)||(27541462-27541527)
chr3 (1-70)||(35597204-35597273)
chr3 (1-70)||(52254098-52254167)
chr3 (9-70)||(52939701-52939762)
chr3 (1-64)||(26014854-26014917)
chr3 (1-59)||(26452693-26452751)
chr3 (1-63)||(48353039-48353101)
chr3 (5-67)||(50314671-50314733)
chr3 (2-64)||(52714777-52714839)
chr3 (1-67)||(55361196-55361262)
chr3 (1-70)||(36670974-36671043)
chr3 (1-73)||(44413879-44413949)
chr3 (1-70)||(44855995-44856064)
chr3 (1-70)||(46623949-46624018)
chr3 (5-73)||(7668144-7668212)
chr3 (2-70)||(19149033-19149101)
chr3 (1-70)||(33939278-33939349)
chr3 (1-64)||(26550280-26550343)
chr3 (1-64)||(28700503-28700566)
chr3 (1-64)||(35377047-35377110)
chr3 (1-64)||(52326061-52326124)
chr3 (1-67)||(19150282-19150347)
chr3 (1-75)||(34064060-34064134)
chr3 (1-67)||(39629801-39629867)
chr3 (9-70)||(42357044-42357103)
chr3 (5-67)||(45711402-45711464)
chr3 (1-70)||(13735171-13735240)
chr3 (1-70)||(37302588-37302657)
chr3 (33-70)||(41309191-41309228)
chr3 (1-65)||(6093843-6093907)
chr3 (5-73)||(7934021-7934088)
chr3 (33-138)||(33472310-33472415)
chr3 (1-73)||(37503704-37503776)
chr3 (1-60)||(29573326-29573384)
chr3 (1-60)||(45186521-45186580)
chr3 (1-64)||(49761152-49761215)
chr3 (1-64)||(49761350-49761412)
chr3 (2-64)||(8847153-8847215)
chr3 (1-67)||(10811178-10811244)
chr3 (2-64)||(36756016-36756078)
chr3 (2-72)||(44463400-44463470)
chr3 (1-63)||(50876329-50876391)
chr3 (1-55)||(53718090-53718143)
chr3 (1-62)||(32205637-32205698)
chr3 (1-138)||(32362976-32363111)
chr3 (1-66)||(46966064-46966129)
chr3 (1-70)||(47472371-47472440)
chr3 (89-142)||(53681182-53681235)
chr3 (1-69)||(34662049-34662117)
chr3 (7-67)||(44813410-44813470)
chr3 (5-61)||(50559180-50559236)
chr3 (1-61)||(54099325-54099385)
[»] chr8 (69 HSPs)
chr8 (1-138)||(44061760-44061897)
chr8 (1-138)||(25987678-25987815)
chr8 (1-142)||(26026939-26027080)
chr8 (9-113)||(5600903-5601007)
chr8 (9-113)||(5639613-5639717)
chr8 (1-142)||(33451452-33451591)
chr8 (5-142)||(44090933-44091070)
chr8 (1-142)||(1068649-1068790)
chr8 (1-70)||(27325800-27325869)
chr8 (1-142)||(15716863-15717004)
chr8 (5-142)||(34435624-34435761)
chr8 (1-141)||(2730849-2730989)
chr8 (2-142)||(28772013-28772151)
chr8 (1-142)||(33107754-33107895)
chr8 (9-133)||(45405880-45406004)
chr8 (1-145)||(37172102-37172247)
chr8 (1-73)||(43397823-43397895)
chr8 (1-64)||(10902747-10902810)
chr8 (30-142)||(12241144-12241256)
chr8 (1-64)||(35067203-35067266)
chr8 (1-67)||(6440124-6440190)
chr8 (1-67)||(10731588-10731654)
chr8 (1-67)||(11253505-11253571)
chr8 (1-67)||(36660413-36660479)
chr8 (1-70)||(5277459-5277528)
chr8 (1-70)||(10692481-10692550)
chr8 (5-70)||(32501156-32501221)
chr8 (1-73)||(12898886-12898958)
chr8 (1-61)||(24798326-24798386)
chr8 (5-64)||(22719486-22719545)
chr8 (1-64)||(25830211-25830274)
chr8 (6-65)||(36816581-36816640)
chr8 (1-64)||(37449391-37449454)
chr8 (6-64)||(10839448-10839506)
chr8 (9-63)||(31249491-31249545)
chr8 (1-63)||(34718158-34718219)
chr8 (1-67)||(37133825-37133891)
chr8 (2-144)||(42652639-42652779)
chr8 (1-63)||(43715917-43715979)
chr8 (9-63)||(44825493-44825547)
chr8 (1-66)||(5740749-5740814)
chr8 (1-70)||(34186649-34186718)
chr8 (1-69)||(42768248-42768314)
chr8 (1-64)||(3946283-3946346)
chr8 (2-70)||(4054246-4054314)
chr8 (1-65)||(7777144-7777208)
chr8 (87-143)||(11134712-11134768)
chr8 (1-61)||(43285931-43285991)
chr8 (1-64)||(16613677-16613739)
chr8 (1-60)||(30439476-30439534)
chr8 (1-67)||(32954883-32954949)
chr8 (1-64)||(38675646-38675709)
chr8 (1-67)||(44064400-44064466)
chr8 (1-67)||(10592243-10592309)
chr8 (1-67)||(39211084-39211150)
chr8 (36-74)||(39856115-39856153)
chr8 (1-67)||(45405574-45405640)
chr8 (1-74)||(157098-157170)
chr8 (7-64)||(3413158-3413215)
chr8 (1-73)||(7271894-7271964)
chr8 (2-63)||(8671522-8671583)
chr8 (1-65)||(34490123-34490185)
chr8 (3-67)||(36885451-36885513)
chr8 (9-67)||(41639760-41639820)
chr8 (2-74)||(6445220-6445292)
chr8 (3-67)||(7598753-7598817)
chr8 (1-64)||(13970962-13971022)
chr8 (2-67)||(32020426-32020493)
chr8 (1-64)||(37657032-37657095)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-144)||(8515-8658)
[»] chr6 (30 HSPs)
chr6 (1-143)||(8645351-8645493)
chr6 (1-139)||(18064980-18065118)
chr6 (1-142)||(5739651-5739792)
chr6 (1-142)||(33712363-33712504)
chr6 (1-134)||(11635430-11635563)
chr6 (1-69)||(25811799-25811867)
chr6 (1-67)||(22079526-22079592)
chr6 (1-142)||(8505660-8505802)
chr6 (38-142)||(1286993-1287097)
chr6 (8-143)||(14910227-14910360)
chr6 (32-143)||(17182172-17182283)
chr6 (1-70)||(552835-552904)
chr6 (1-70)||(5080527-5080596)
chr6 (9-70)||(8098557-8098618)
chr6 (1-70)||(15974650-15974719)
chr6 (2-73)||(3853264-3853335)
chr6 (1-64)||(28630141-28630204)
chr6 (4-67)||(32316891-32316954)
chr6 (1-67)||(17551341-17551407)
chr6 (9-67)||(26595399-26595457)
chr6 (1-67)||(31883266-31883332)
chr6 (1-74)||(10335593-10335666)
chr6 (1-64)||(28748155-28748218)
chr6 (10-74)||(30945865-30945929)
chr6 (1-73)||(34047429-34047501)
chr6 (1-60)||(13143352-13143410)
chr6 (1-60)||(18141271-18141329)
chr6 (1-70)||(14817974-14818043)
chr6 (44-76)||(3772441-3772473)
chr6 (1-49)||(13423011-13423059)
[»] chr5 (59 HSPs)
chr5 (1-139)||(13089672-13089810)
chr5 (5-138)||(17097694-17097826)
chr5 (1-142)||(11954474-11954615)
chr5 (1-76)||(611907-611982)
chr5 (1-143)||(16971986-16972128)
chr5 (1-70)||(19521963-19522032)
chr5 (1-70)||(33037562-33037631)
chr5 (1-70)||(36738990-36739059)
chr5 (1-141)||(21210861-21211001)
chr5 (1-140)||(42446180-42446319)
chr5 (1-70)||(5168225-5168294)
chr5 (34-143)||(31748412-31748521)
chr5 (1-64)||(40364611-40364674)
chr5 (1-70)||(26791204-26791273)
chr5 (1-70)||(14923113-14923184)
chr5 (33-142)||(32872785-32872894)
chr5 (2-70)||(35646426-35646494)
chr5 (1-67)||(2972365-2972432)
chr5 (2-61)||(38493668-38493727)
chr5 (1-67)||(41321297-41321363)
chr5 (1-70)||(7287149-7287218)
chr5 (30-139)||(19981876-19981985)
chr5 (1-64)||(884484-884547)
chr5 (5-64)||(18660805-18660864)
chr5 (1-64)||(22098298-22098361)
chr5 (2-73)||(33958216-33958287)
chr5 (1-64)||(39054629-39054692)
chr5 (1-67)||(20770174-20770239)
chr5 (38-141)||(39195824-39195927)
chr5 (1-70)||(1764266-1764335)
chr5 (5-70)||(22649621-22649686)
chr5 (1-70)||(28306092-28306161)
chr5 (2-67)||(35567544-35567609)
chr5 (90-143)||(36562939-36562992)
chr5 (1-62)||(39195760-39195821)
chr5 (1-70)||(42174963-42175032)
chr5 (1-73)||(1274400-1274472)
chr5 (1-64)||(8920121-8920184)
chr5 (1-64)||(21922110-21922173)
chr5 (1-64)||(41173295-41173358)
chr5 (1-60)||(3640167-3640225)
chr5 (9-64)||(4719701-4719756)
chr5 (1-60)||(6940120-6940178)
chr5 (5-64)||(7076534-7076593)
chr5 (1-64)||(16690542-16690605)
chr5 (1-60)||(18695361-18695419)
chr5 (5-67)||(1671588-1671650)
chr5 (1-67)||(14532547-14532613)
chr5 (30-76)||(32478449-32478495)
chr5 (7-64)||(29463044-29463101)
chr5 (1-61)||(5721786-5721846)
chr5 (1-60)||(11148554-11148611)
chr5 (4-64)||(21156033-21156093)
chr5 (5-73)||(21943652-21943720)
chr5 (1-69)||(28467414-28467482)
chr5 (1-76)||(35075531-35075604)
chr5 (1-73)||(35649945-35650016)
chr5 (90-134)||(38363491-38363535)
chr5 (1-57)||(41175679-41175734)
[»] scaffold0618 (1 HSPs)
scaffold0618 (5-142)||(8840-8977)
[»] scaffold0276 (1 HSPs)
scaffold0276 (5-142)||(1691-1828)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-142)||(6407-6548)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-142)||(10979-11118)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-140)||(101790-101934)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-70)||(49337-49406)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-70)||(76579-76648)
[»] scaffold0184 (2 HSPs)
scaffold0184 (30-142)||(13444-13556)
scaffold0184 (1-63)||(16755-16816)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-76)||(28280-28355)
[»] scaffold0078 (2 HSPs)
scaffold0078 (30-142)||(59288-59400)
scaffold0078 (1-63)||(56028-56089)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-70)||(8710-8779)
[»] scaffold0041 (1 HSPs)
scaffold0041 (5-70)||(10923-10988)
[»] scaffold0519 (1 HSPs)
scaffold0519 (1-67)||(11823-11890)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-63)||(44817-44879)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-67)||(34756-34822)
[»] scaffold0067 (1 HSPs)
scaffold0067 (7-70)||(35569-35634)


Alignment Details
Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 4740220 - 4740041
Alignment:
Q  143 aaaacttaaaggattaattcaaaataaaaggttttaaccaattattaaattctaaattggcttttaagttattttattgatgttcctt-nnnnnnnnnng 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |    
T  4740220 aaaacttaaaggattaattcaaaataaaaggttttaaccaattattaaattctaaattggcttttaagttattttattgatgttccttaaaaaaaaaaag 4740121  T
Q  242 ttattttattgatgtgtcgtcgtcaaatgggattaagttttttatgttggattaaaattgatctatgaactcaaatatct 321  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4740120 ttattttattgatgtgtcgtcgtcaaatgggattaagttttttaagttggattaaaattgatctatgaactcaaatatct 4740041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 11965839 - 11965977
Alignment:
Q  4 ctttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaac 103  Q
    ||||||||||||||| |||||  |  ||||||||||||| ||||||||||||||||||||| |||||||||||       ||| ||| ||||||||||||    
T  11965839 ctttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgccactatctaaatttctatgtataatgtggttgtccaac 11965938  T
Q  104 aagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||  ||| |||||| |||||||||||||||    
T  11965939 aagttgtcacataaaaaggttgttcaaataacattgctc 11965977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36587497 - 36587358
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| |||||| |||| |||||  |||||||||||||||||||| |||||||||||       ||| ||||| |||||||    
T  36587497 caactttctctctcatactcacattatcattttactctctct--ctattgctttgatttttgtgccactatctaaatttctttgtataatttagttgtcc 36587400  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || | ||||||| || |||||||||| |||||||||||||||    
T  36587399 aaaaggttgtcagaagaaatggttgttcaaataacattgctc 36587358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 31578477 - 31578618
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||| |||||||||||||||| ||  || |||||| ||| ||||||||||||||||||||||||||| |||||       ||| || || |||||||    
T  31578477 caactttttctctcatactcacattattcttttactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataagttagttgtcc 31578576  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||| ||||| |||| |||||| ||||||||    
T  31578577 aacaagttgtcacaagaaatgattgttcaaatatcattgctc 31578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 37316843 - 37316702
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||| |||||  |  ||||||||||||| |||||||||||||| |||||||||||| |||||       ||| ||| |||||||||    
T  37316843 caactttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgtcactacctaaatttctttgtataatgtggttgtcc 37316744  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||| |  ||| |||||| |||||||||||||||    
T  37316743 aacaagttgtcatagaaaaaggttgttcaaataacattgctc 37316702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 26481114 - 26480977
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||| |||||||||||| |  |  ||||||||||| | |||||| ||||||||||||||||||||||||||       ||| |||||||||||  || |    
T  26481114 tttctttctcatactcacgttgtttttctactttctttctctattactttgatttttgtgtcactatctaaatccctttgtataatttggttgtataaga 26481015  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  26481014 agttgtcacaataaagggttgttcaaataacattgctc 26480977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 30831802 - 30831935
Alignment:
Q  6 ttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaa 105  Q
    |||||||||||||||||||  |  ||||||||||||| |||||| |||||||||||||| |||||||||||       ||| |||||| ||||  || ||    
T  30831802 ttctctctcatactcacattgttcttctactttctctctctattactttgatttttgtgccactatctaaatccctttgtataatttgattgtataagaa 30831901  T
Q  106 gttgtcacaataaatggttgtacaaataacattg 139  Q
    |||||||||||||||| |||| ||||||||||||    
T  30831902 gttgtcacaataaatgattgttcaaataacattg 30831935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34945119 - 34945050
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  34945119 caactttctctctcatactcacatgatctttttactttctctctctattgctttgatttttgtgccacta 34945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 44239083 - 44239221
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||||| | ||| |||||| || ||| || ||| ||| ||||||||||||||||||||||||||  |||||       ||| ||||| ||||||||| |    
T  44239083 tttctcttttatattcacattattattttattttatctctctattgctttgatttttgtgtcactgcctaaatttctttgtataatttagttgtccaaaa 44239182  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctca 143  Q
    | |||||||||||||||||||| ||||||||||||||||    
T  44239183 aattgtcacaataaatggttgttcaaataacattgctca 44239221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 37731224 - 37731083
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||||||| |||||  |  |||||||||| || |||||||||||||| |||||| ||||| |||||       ||| ||| ||||||| |||||    
T  37731224 tttctctctcatacacacattgttcttctactttcgctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtgcaaca 37731125  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctcaaaa 146  Q
    ||||||||||  ||| |||||| |||||||||||||||||||    
T  37731124 agttgtcacataaaaaggttgttcaaataacattgctcaaaa 37731083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18254238 - 18254166
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||| ||||||||    
T  18254238 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactatct 18254166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 14877069 - 14877169
Alignment:
Q  38 tctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacat 137  Q
    ||||||| ||||| ||||||||||||| ||||| |||||       || ||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  14877069 tctctatatattgttttgatttttgtgccactacctaaatttctttgttaaatttggttgtctaacaagttgtcacaagaaatggttgttcaaataacat 14877168  T
Q  138 t 138  Q
    |    
T  14877169 t 14877169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6511293 - 6511362
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || || ||||||| |||||||||||| ||||||||||||||    
T  6511293 caactttctctctcatactcacattatctttttattttctctttctattgctttggtttttgtgtcacta 6511362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9647174 - 9647243
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||||||| || ||| || |||||||||| |||||||||||| ||||||||||||||    
T  9647174 caactttctctctcatactcatattatctttttactttctctctctattgctttggtttttgtgtcacta 9647243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 2427940 - 2427876
Alignment:
Q  88 aatttggttgtccaacaagttgtcacaataaatggttgtacaaataacattgctcaaaacttaaa 152  Q
    ||||| |||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||    
T  2427940 aatttagttgtccaacaaattgtcacaaaaaatggttgttcaaataacattgctcaaaaattaaa 2427876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32944532 - 32944457
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||||||||||||||| ||||||  || || |||||| ||| ||||||||||||||||||||||||||| |||||    
T  32944532 caactttctctctcatagtcacattctccttttactttttctctctattgctttgatttttgtgtcactacctaaa 32944457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 18510718 - 18510857
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||| ||||| |||||||||  || ||||||||||||| |||| | ||||||||||||||||| || |||||       |||  |||||||||||     
T  18510718 caactttccctctcttactcacattgtccttctactttctctctctacttctttgatttttgtgtcattacctaaatttctttgtattatttggttgtct 18510817  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgc 140  Q
    || | |||||||||| |||  ||||| |||||||||||||    
T  18510818 aataggttgtcacaagaaaatgttgttcaaataacattgc 18510857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 8847531 - 8847669
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    |||||||| |||||||| ||||| ||  ||||||||||||| |||||||||||||| ||| |  |||||||||||       ||| |||  |||||||||    
T  8847531 aactttctttctcatacacacattattcttctactttctctctctattgctttgatatttataccactatctaaatttctttgtataatgcggttgtcca 8847630  T
Q  102 acaagttgtcaca-ataaatggttgtacaaataacattg 139  Q
    ||||||||||||| | ||| | |||| ||||||||||||    
T  8847631 acaagttgtcacatagaaaagattgttcaaataacattg 8847669  T

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Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9207632 - 9207701
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||| |||||    
T  9207632 caactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccacta 9207701  T

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Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43057107 - 43057176
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||| |||||||||| |||||| || ||| | | |||||||||||||||||||||||||||    
T  43057107 caactttctctcttatactcacattatcattttattttttttctctattgctttgatttttgtgtcacta 43057176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41042296 - 41042368
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||| |||||||||||||||| ||| || |||||||||| |||||||||||| ||||| ||||| |||||    
T  41042296 caactttttctctcatactcacattatctttttactttctctctctattgctttggtttttatgtcaatatct 41042368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 41195630 - 41195698
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||| | | || |||||||||| |||||||||||| ||||||||||| |||||    
T  41195630 tttctctctcatactcacattacctttttactttctctctctattgctttggtttttgtgtcaatatct 41195698  T

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Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 14871951 - 14872051
Alignment:
Q  38 tctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacat 137  Q
    ||||| ||||||| ||||||||||||| ||||| |||||       ||| |||||| ||||| |||||||||| |||| |||||||||| ||||||||||    
T  14871951 tctctctctattgttttgatttttgtgccactacctaaatttctttgtataatttgattgtctaacaagttgttacaagaaatggttgttcaaataacat 14872050  T
Q  138 t 138  Q
    |    
T  14872051 t 14872051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29449254 - 29449317
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||||||||||||    
T  29449254 caactttctctctcatactcacattatatttttactttctctctctattactttgatttttgtg 29449317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7084743 - 7084681
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||||||||||||| || ||  || |||||||||| ||||||||||||||||||||    
T  7084743 caactttctctctcatactcatattatatttttactttctctttctattgctttgatttttgt 7084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9990733 - 9990795
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||||| |||||||||| ||| || |||||||||| |||||||||||| |||||||    
T  9990733 caactttctctcttatactcacattatctttttactttctctctctattgctttggtttttgt 9990795  T

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Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 2076612 - 2076677
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||| |||| ||||||||  ||| || |||||||||| ||||||||||||||||||||||||    
T  2076612 aactttctttctcctactcacactatctttttactttctctttctattgctttgatttttgtgtca 2076677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9760060 - 9760113
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgcttt 54  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||    
T  9760060 caactttctctctcatactcacattatctttttactttctctctctattgcttt 9760113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 19109118 - 19109053
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||| |||| ||| || || ||||||| ||||||||||||||||||||| |||||    
T  19109118 tttctctctcatacttacattatctttttattttctctctctattgctttgatttttgtgccacta 19109053  T

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Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43487421 - 43487490
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||| ||||||| ||  || |||||||| | |||||||||||| ||||||||||||||    
T  43487421 caactttctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtgtcacta 43487490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 9194286 - 9194346
Alignment:
Q  4 ctttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||||| ||| || |||||||||| ||||||| |||| ||||||||    
T  9194286 ctttctctctcatactcacattatctttttactttctctctctattgttttggtttttgtg 9194346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37003653 - 37003766
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||  |  |||||| |||||| | |||| ||||||||||| || |||||||||||       ||| |||||||||||      
T  37003653 caactttctctctcatactcacattgttcttctacattctctctttattactttgatttttatgccactatctaaacccctttgtataatttggttgtat 37003752  T
Q  101 aacaagttgtcaca 114  Q
    || |||||||||||    
T  37003753 aagaagttgtcaca 37003766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19843527 - 19843590
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||||| || ||  || | |||||||| |||||||||||||||||||||    
T  19843527 caactttctctctcatactcagattatatttttcctttctctctctattgctttgatttttgtg 19843590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 22416256 - 22416323
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    ||||||||||| |||||| |||| ||| || |||||||||| |||||||||||| |||||||| ||||    
T  22416256 aactttctctcccatacttacattatctttttactttctctctctattgctttggtttttgtgccact 22416323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36774581 - 36774640
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    ||||||||||||||||| |||||| ||  || |||||||||| |||||||||||||||||    
T  36774581 caactttctctctcatattcacattatatttttactttctctctctattgctttgatttt 36774640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14328424 - 14328490
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||| |||||||||||||||| ||  || |||||||||| ||| ||||||||||||| ||||||    
T  14328424 caactttttctctcatactcacattatatttttactttctctctctgttgctttgattttcgtgtca 14328490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40700238 - 40700304
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||| |||||||||| ||||||    
T  40700238 caactttctctctcatactcacattatatttttactttatctctctattactttgattttcgtgtca 40700304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42091533 - 42091464
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||| |||||||||| |||  | ||||||  || |||||||||||| ||||||||||||||    
T  42091533 caactttctctcttatactcacattatctctttacttttcctctctattgctttggtttttgtgtcacta 42091464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6646866 - 6646929
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || ||||| | ||||||| |||||||||||| ||||||||    
T  6646866 caactttctctctcatactcacatcat-attctcattttctctctctattgctttggtttttgtg 6646929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19916698 - 19916766
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    |||||||||||||||||| |||||  |  ||||||||||||| ||||||  |||||| |||||||||||    
T  19916698 caactttctctctcatacacacattgttcttctactttctctctctattattttgatatttgtgtcact 19916766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27490759 - 27490695
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    ||||||||||||||| ||||| || ||  || || ||||||| ||||||||||||||||||||||    
T  27490759 caactttctctctcacactcatattatgtttttaatttctctctctattgctttgatttttgtgt 27490695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8848724 - 8848664
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||||||| |||||||| ||  || |||||||||  ||||||||||||||||||||    
T  8848724 caactttctctctcacactcacatcatgtttttactttctc--tctattgctttgatttttgt 8848664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10472176 - 10472117
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||| ||||    
T  10472176 caactttctctctcatactcacattatatttttactttctctctctattactttgttttt 10472117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12889860 - 12889798
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || || ||| ||| |||||||||||||||||||||    
T  12889860 caactttctctctcatactcacattat-tttttaatttatctctctattgctttgatttttgtg 12889798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36802939 - 36803001
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||| ||||||||||||||    
T  36802939 caactttctctctcatactcacattat-tttttactttatctctctattactttgatttttgtg 36803001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 3838891 - 3838841
Alignment:
Q  19 tcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    |||||| ||| || |||||||||| ||||||| ||||||||||||||||||    
T  3838891 tcacattatctttttactttctctctctattgttttgatttttgtgtcact 3838841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 5361840 - 5361902
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||| ||  || |||||||| | ||||||| |||| |||||||||||    
T  5361840 tttctctctcatactcacattatatttttactttctttttctattgttttggtttttgtgtca 5361902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 7258586 - 7258524
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||| |||| ||   | |||||||||| |||||||||||||||||| |||||    
T  7258586 tttctctctcatacttacatcatgtctttactttctctctctattgctttgatttttatgtca 7258524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 7698245 - 7698287
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcactatctaa 75  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||    
T  7698245 tactttctctttctattgctttgatttttgtgccactacctaa 7698287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17395104 - 17395039
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||| | ||||||||||||||||| ||| |||||| ||| ||||||| ||||||||| ||||||    
T  17395104 caactttatttctcatactcacatgat-attttactttatctttctattgttttgattttcgtgtca 17395039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34134799 - 34134734
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||| |||| ||  || |||||| ||| ||||||||||||||||| ||||||    
T  34134799 caactttctctctcatactgacat-atgtttttactttatctctctattgctttgattttcgtgtca 34134734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39147808 - 39147874
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||| ||||| |||||| ||  || |||||||||| | ||||| ||||||||||||||||    
T  39147808 caactttctctttcatattcacattatgtttttactttctctttgtattgttttgatttttgtgtca 39147874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 40937091 - 40937034
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    ||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  40937091 aactttctctctcatactcacattat-tttttactttatctctctattgctttgatttt 40937034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42372522 - 42372580
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgattt 59  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||| |||||||||    
T  42372522 caactttctctctcatactcacattatttttttactttatctctctattcctttgattt 42372580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 44977524 - 44977462
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||| | |||| ||  || |||||||||| |||||||||||| |||||||||||    
T  44977524 tttctctctcatatttacattatgtttttactttctctctctattgctttggtttttgtgtca 44977462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1248728 - 1248797
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||| ||||||||| | || ||| || |||||| ||| |||||||||||| |||||||| |||||    
T  1248728 caactttctttctcatacttaaattatctttttactttatctctctattgctttggtttttgtgccacta 1248797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 2221037 - 2221093
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgattt 59  Q
    ||||||||||||||||||||||| ||  ||| ||||| ||| ||||||||||||||||    
T  2221037 aactttctctctcatactcacattatttttc-actttatctctctattgctttgattt 2221093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4138214 - 4138161
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgcttt 54  Q
    |||||||||||||||||||||||| || ||| |||||||| | |||||| ||||    
T  4138214 caactttctctctcatactcacattataattttactttctgtctctattacttt 4138161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13711395 - 13711322
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| ||||||||| |||||| ||  || |||||||||| |||||| ||||| |||  |||||||||||||    
T  13711395 caactttatctctcatattcacattatttttttactttctctctctattactttggtttccgtgtcactatcta 13711322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 19642673 - 19642706
Alignment:
Q  34 actttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||| ||||||||||||||||||||||||    
T  19642673 actttctctctctattgctttgatttttgtgtca 19642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 21611686 - 21611620
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||| ||||||| ||| || ||| || ||||||||||  |||||||||||||||||||| |||||    
T  21611686 aactttctttctcatattcatattatctttttactttctct--ctattgctttgatttttgtgccacta 21611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 14871715 - 14871747
Alignment:
Q  35 ctttctctatctattgctttgatttttgtgtca 67  Q
    |||||||| ||||||||||||||||||||||||    
T  14871715 ctttctctctctattgctttgatttttgtgtca 14871747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 32477388 - 32477436
Alignment:
Q  15 atactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||| ||| || |||||||||| | ||||||||||||||||||    
T  32477388 atactcacattatctttttactttctctctatattgctttgatttttgt 32477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34119680 - 34119617
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||| ||||||||| ||||    
T  34119680 caactttctctctcatactcacattat-tttttactttatctctctattgttttgattttcgtgt 34119617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 8e-55; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 12007214 - 12007073
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||       |||||||||||||||||    
T  12007214 caactttctctctcatactcacatgatcattctactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaatttggttgtcc 12007115  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  12007114 aacaagttgtcacaataaatagttgtacaaataacattgctc 12007073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29723955 - 29723811
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatct--attgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgt 98  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||  |||||||||||       |||||||||||||||    
T  29723955 caactttctctctcatactcacatgatcattctattttctctctctctattgctttgatttttgtaccactatctaaatttctttgtaaaatttggttgt 29723856  T
Q  99 ccaacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29723855 ccaacaagttgtcacaataaatggttgtacaaataacattgctca 29723811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 27570387 - 27570527
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||| |||       ||||||||||||||||||    
T  27570387 aactttctctctcatactcacatgatcattctactttttttctctattgctttgatttttgtgccactatcaaaatttctttgtaaaatttggttgtcca 27570486  T
Q  102 acaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    | ||||||||||||||||| |||||||| ||||||||||||    
T  27570487 ataagttgtcacaataaatagttgtacagataacattgctc 27570527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 13152635 - 13152784
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgc-tttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtc 99  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||| ||||||||||||| ||||| |||||       ||| ||||| ||||||    
T  13152635 caactttctctctcatactcacattatccttttactttctctctctattgcttttgatttttgtgccactacctaaatttctttgtataatttagttgtc 13152734  T
Q  100 caacaagttgtcacaataaatggttgtacaaataacattgctcaaaactt 149  Q
    ||| | ||||||| || |||||||||| |||||| |||||||||| ||||    
T  13152735 caaaaggttgtcataagaaatggttgttcaaatatcattgctcaatactt 13152784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34978339 - 34978480
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||| ||||| |||||       ||| ||||| |||||||    
T  34978339 caactttctctctcatactcacattatccttttactttctctctctattgctttgttttttgtgccactacctaaatttctttgtataatttagttgtcc 34978438  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || | |||||||||| ||||||||||  ||||| ||||||||    
T  34978439 aaaaggttgtcacaagaaatggttgttaaaatatcattgctc 34978480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 45420089 - 45419948
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||| |||||| |||||| |||||||||| ||||||| ||||||||||||| ||||| |||||       ||| ||||| |||||||    
T  45420089 caactttctctctcatattcacattatcattttactttctctctctattgttttgatttttgtgccactacctaaatttctttgtataatttagttgtcc 45419990  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || | ||||||| || |||||||||| ||||||| |||||||    
T  45419989 aaaaggttgtcaaaagaaatggttgttcaaataatattgctc 45419948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 32777735 - 32777593
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||   || ||||||||||||| || ||| |||||||||||||| ||||| |||||       ||| |||||||||||||    
T  32777735 caactttctctctcatactcacactgtccttctactttctctctccattactttgatttttgtgccactacctaaatttctttgtataatttggttgtcc 32777636  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    |||||||| | |||| ||| | |||| ||||||||||||||||    
T  32777635 aacaagttattacaagaaaagattgttcaaataacattgctca 32777593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 37352161 - 37352295
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagtt 108  Q
    ||||||||| ||||||   | ||||||||||||| |||| || ||||||||||||||||||| |||||       ||| |||||||||||||||||||||    
T  37352161 tctctcatattcacattgcccttctactttctctctctactgttttgatttttgtgtcactacctaaatttatttgtataatttggttgtccaacaagtt 37352260  T
Q  109 gtcacaataaatggttgtacaaataacattgctca 143  Q
    |  |||| |||||||||| ||||||||||||||||    
T  37352261 ggtacaagaaatggttgttcaaataacattgctca 37352295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 15325639 - 15325527
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtaca 129  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||       ||| ||| |||||||||||||||||||||||  ||| |||||| ||    
T  15325639 ttctactttctctctctattgtttttatttttgtgtcactatctaaatttttttgtataatgtggttgtccaacaagttgtcacataaaaaggttgttca 15325540  T
Q  130 aataacattgctc 142  Q
    |||||||||||||    
T  15325539 aataacattgctc 15325527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 28249597 - 28249460
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    |||||| ||||||||| |||||| || ||| || ||| ||| ||| |||||||||||||||||||||||  ||||       ||| ||||| ||||||||    
T  28249597 aactttttctctcatattcacattattattttattttatctctcttttgctttgatttttgtgtcactacttaaatttctttgtataatttagttgtcca 28249498  T
Q  102 acaagttgtcacaataaatggttgtacaaataacattg 139  Q
    | |||||||||||| |||||||||| ||||||||||||    
T  28249497 aaaagttgtcacaagaaatggttgttcaaataacattg 28249460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 2008823 - 2008717
Alignment:
Q  38 tctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacat 137  Q
    ||||| |||||||||||||| |||||| ||||| |||||       ||| ||| |||||||||||||||||||||||  |||||||||| ||||||||||    
T  2008823 tctctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtccaacaagttgtcacataaaatggttgttcaaataacat 2008724  T
Q  138 tgctcaa 144  Q
    |||||||    
T  2008723 tgctcaa 2008717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 33845085 - 33845226
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||| |||||| |||||  |  ||||||||| | | ||| ||||||||||||||||||||||| |||||       ||| ||| |||||||||    
T  33845085 caactttctctttcatacacacattgttcttctactttttttctctgttgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtcc 33845184  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||| ||||||||  ||| |||||| |||||||||||||||    
T  33845185 aacaaattgtcacatgaaaaggttgttcaaataacattgctc 33845226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44189339 - 44189270
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||| ||||| ||||||||||||||    
T  44189339 caactttctctctcatactcacattatctttttactttctctctctattactttggtttttgtgtcacta 44189270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26749047 - 26749188
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||| | ||  || |||||||| | ||||||||||||||| ||||| ||  | |||||       ||| ||||| |||||||    
T  26749047 caactttctctctcatactcactttatttttatactttctttctctattgctttgattgttgtgccataacctaaatctctttgtataatttagttgtcc 26749146  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || |  ||||||||| |||||||||| |||||||||||||||    
T  26749147 aaaagattgtcacaaaaaatggttgttcaaataacattgctc 26749188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 43807833 - 43807698
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagtt 108  Q
    ||||||||||||||||  |  || |||||||||| ||||||  |||||||||||||||||||  ||||       ||| ||||||||||| |||||| ||    
T  43807833 tctctcatactcacattgttcttttactttctctttctattaatttgatttttgtgtcactacttaaatgtctttgtataatttggttgtacaacaaatt 43807734  T
Q  109 gtcacaataaatggttgtacaaataacattgctcaa 144  Q
    |||| || ||| |||||| ||||||||| |||||||    
T  43807733 gtcataagaaagggttgttcaaataacactgctcaa 43807698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43942679 - 43942741
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||    
T  43942679 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgt 43942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 46880949 - 46881088
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||||||||||||||| ||  |  ||||||| ||||| |||||| |||||||||||  | |||||||||||       ||| |||||||||||  || |    
T  46880949 tttctctctcatactcatattgttcttctactatctctctctattactttgattttttcgccactatctaaatgtcgttgtataatttggttgtataaaa 46881048  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctcaa 144  Q
    | |||||| |||||| |||||| |||||||||||||||||    
T  46881049 aattgtcataataaagggttgttcaaataacattgctcaa 46881088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 21103055 - 21103193
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||| ||| ||||| |||| ||  || |||||| ||| | |||||||||||||||| || |||||||||||       ||| || || |||||||    
T  21103055 caactttctatcttatacttacattatttttttactttatctctttattgctttgatttttatgccactatctaaatttctttgtataagttagttgtcc 21103154  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattg 139  Q
    |||||||| |||||| |||||||||| |||||| |||||    
T  21103155 aacaagttatcacaagaaatggttgttcaaatatcattg 21103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 43081918 - 43081780
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||| |||| |||||  |  ||||||||||||| ||||||||||| || |||||||||||| |||||       ||| ||| ||||||||     
T  43081918 caactttctctcttatacacacattgttcttctactttctctctctattgctttaatatttgtgtcactacctaaatttctttgtataatgtggttgtct 43081819  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattg 139  Q
    ||||| ||||||||  |||  ||||| ||||||||||||    
T  43081818 aacaaattgtcacataaaaatgttgttcaaataacattg 43081780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 40854679 - 40854620
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||| ||  || |||||||||| |||||||||||||||||||||    
T  40854679 tttctctctcatactcacattatatttttactttctctctctattgctttgatttttgtg 40854620  T

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Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31445360 - 31445426
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||| | |||||||||||| ||  || |||||||||| ||||||||||||||||||||||||    
T  31445360 caactttctttttcatactcacattatatttttactttctctctctattgctttgatttttgtgtca 31445426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33057422 - 33057561
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||| |||| |||||| ||  || | ||||||||||| |||||||||||||||||||||| | || |||||       |||  |||||||||||     
T  33057422 caactttctttctcttactcatattgtcttcctactttctctctctattgctttgatttttgtgttattacctaaatttctttgtattatttggttgtct 33057521  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgc 140  Q
    || | |||||||||| ||| | |||| |||||||||||||    
T  33057522 aataggttgtcacaagaaaagattgttcaaataacattgc 33057561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35098732 - 35098666
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||| ||||||||||||  |  || |||||||||| ||||||||||||||||||||||||    
T  35098732 caactttctctttcatactcacattctatttttactttctctttctattgctttgatttttgtgtca 35098666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41189572 - 41189506
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||| |||||||||||||| ||| || |||||||||| |||||||||||  |||||||||||    
T  41189572 caactttctttctcatactcacattatctttttactttctctctctattgctttagtttttgtgtca 41189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 4292475 - 4292532
Alignment:
Q  6 ttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||||||||||| ||  || |||||||||| ||||||||||||||||||||    
T  4292475 ttctctctcatactcacattatgtttttactttctctctctattgctttgatttttgt 4292532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17945110 - 17945183
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| |||||||||||||||| ||  || |||||||||| |||||||||||| |||  |||||||||||||    
T  17945110 caactttatctctcatactcacattattcttttactttctctctctattgctttggtttcggtgtcactatcta 17945183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 24614341 - 24614276
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||| |||||||||||||| |||||| || ||||||  |||||||||||| ||||||||||||||    
T  24614341 tttctttctcatactcacattatcattttattttctcactctattgctttggtttttgtgtcacta 24614276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30941428 - 30941498
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactt----tctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||| || |||||    ||||| ||||||||||||||||||||||||    
T  30941428 caactttctctctcatactcacattatctttttactttctctctctctctattgctttgatttttgtgtca 30941498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 38956639 - 38956578
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||| ||| || |||||||||| |||||||||||| |||||||| |||||    
T  38956639 tctctcatactcacattatctttttactttctctctctattgctttgttttttgtgccacta 38956578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41989771 - 41989702
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||  || |||||||||| | |||||||||| |||||||| |||||    
T  41989771 caactttctctctcatactcacattatatttttactttctctctttattgctttggtttttgtgccacta 41989702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43025382 - 43025454
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||| ||||||||||||| || ||| || |||||| ||| |||||||||||| |||||||| ||||||||    
T  43025382 caactttatctctcatactcatattatctttttactttttctctctattgctttggtttttgtgccactatct 43025454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 3148798 - 3148882
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcaca 114  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||||        || ||| ||||||| |||||||||||||||    
T  3148798 ttctactttctctctctattactttgatatttgtgtcactatctaaatttatttatataatgtggttgttcaacaagttgtcaca 3148882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35823003 - 35822940
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||| |||| ||| ||  || |||||||||| |||||||||||||||||||||    
T  35823003 caactttctctctcacactcgcattatatttttactttctctctctattgctttgatttttgtg 35822940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 46578156 - 46578101
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||| |||||| |||||| |||||||||| ||||||| |||||||||||||    
T  46578156 tctctcatattcacattatcattttactttctctctctattgatttgatttttgtg 46578101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47448869 - 47448944
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||||||||||||||||||||||  |  || |||||||| | |||||||||||| |||||||| ||||| |||||    
T  47448869 caactttctctctcatactcacattgtgtttttactttctttctctattgctttggtttttgtgccactacctaaa 47448944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10700214 - 10700148
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||  |||||||||||||| ||   | |||||||||| ||||||||||||||||||||||||    
T  10700214 caactttccttctcatactcacatcatgtctttactttctctctctattgctttgatttttgtgtca 10700148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 24532963 - 24532905
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||| ||  || |||||||||| |||||||||||| |||||||||||    
T  24532963 tctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtca 24532905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35072391 - 35072325
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||| ||||| ||||||  |  || |||||||||| ||||||||||||||||||||||||    
T  35072391 caactttctctttcatagtcacattctatttttactttctctttctattgctttgatttttgtgtca 35072325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42584845 - 42584911
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||||||||||| | ||||||    
T  42584845 caactttctctctcatactcacattatatttttactttatctctctattgctttgattctcgtgtca 42584911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33776402 - 33776475
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| |||||||||||||||| ||  ||  ||||||||| |||||| ||||| |||| |||||||||||||    
T  33776402 caactttatctctcatactcacattattttttaactttctctctctattactttggttttcgtgtcactatcta 33776475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44895601 - 44895532
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||| ||||||| |||| | ||| || |||||||||| |||||||||||| |||||||| |||||    
T  44895601 caactttctatctcatattcacgttatctttttactttctctctctattgctttggtttttgtgccacta 44895532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7817680 - 7817737
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  7817680 caactttctctctcatactcacattat--ttttactttatctctctattgctttgatttt 7817737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35586801 - 35586738
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || ||||| | ||||||| |||||||||||| ||||||||    
T  35586801 caactttctctctcatactcacatcat-attctcattttctctctctattgctttggtttttgtg 35586738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41018706 - 41018770
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    ||||||||| |||||||||||||| ||  || |||||||||| |||||| ||||| |||||||||    
T  41018706 caactttctatctcatactcacattatatttttactttctctctctattactttggtttttgtgt 41018770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1471319 - 1471261
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  1471319 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 1471261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 19643431 - 19643392
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcactatc 72  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  19643431 tactttatctctctattgctttgatttttgtgtcactatc 19643392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 46829522 - 46829580
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  46829522 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 46829580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 11564937 - 11564994
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    ||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  11564937 aactttctctctcatactcacattat-tttttactttatctctctattgctttgatttt 11564994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 34507226 - 34507168
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||| ||||||||||| ||  || |||||||||| ||||||||||||||||| ||||||    
T  34507226 tctcccatactcacattatatttttactttctctctctattgctttgattttcgtgtca 34507168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35452601 - 35452544
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgattt 59  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||||||||||||    
T  35452601 caactttctctctcatactcacataat-tttttactttatctctctattgctttgattt 35452544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 36703892 - 36703826
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaa 75  Q
    |||||||||||||||| ||  || |||||||||| |||||||||||  |||  ||||||||||||||    
T  36703892 tctctcatactcacattatttttttactttctctctctattgctttagtttccgtgtcactatctaa 36703826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41430180 - 41430114
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||| |||||||||| ||  || |||||| ||| |||||||||||| |||| ||||||    
T  41430180 caactttctctcttatactcacattatatttttactttatctctctattgctttggttttcgtgtca 41430114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48062099 - 48062165
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||| ||||||| || ||  || |||||||||| ||||||| |||| |||||||||||    
T  48062099 caactttctctcttatactcatattatgtttttactttctctctctattgttttggtttttgtgtca 48062165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 17002380 - 17002445
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||| |||||||||||| ||  || ||| |||||| |||||| ||||| |||||||||||    
T  17002380 aactttctctttcatactcacattatatttttaccttctctttctattactttggtttttgtgtca 17002445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22925311 - 22925241
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||| |||||||||||||||||| ||  || || |||||||||  |||||||| |||||||||||| |||||    
T  22925311 caactatctctctcatactcacattatgtttttaatttctctat--attgctttaatttttgtgtcaatatct 22925241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40112979 - 40112914
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||| | | || ||| || |||||||||| |||||||||||| |||||||| |||||    
T  40112979 tttctctctcatatttatattatctttttactttctctctctattgctttggtttttgtgccacta 40112914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3937150 - 3937089
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||| || |||||| ||  |||||| ||||| ||||||||    
T  3937150 caactttctctctcatactcacattatctttttactttatc--tctattactttggtttttgtg 3937089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22605402 - 22605475
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||| ||||||||| ||||||||  || || || |||||||  |||||| |||| ||||||||||||||||||||    
T  22605402 caactatctctctcaaactcacattctctttttattttctct--ctattgttttggtttttgtgtcactatctaaa 22605475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33224866 - 33224929
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || ||||| | ||||||| |||||| ||||| ||||||||    
T  33224866 caactttctctctcatactcacatcat-attctcattttctctctctattactttggtttttgtg 33224929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 36352607 - 36352547
Alignment:
Q  7 tctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||| |||| ||  || |||||| ||| ||||||||||||||||| ||||||    
T  36352607 tctctctcatacttacattatatttttactttatctctctattgctttgattttcgtgtca 36352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37899241 - 37899178
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||| |||| || ||||| | ||||||| |||||||||||| ||||||||    
T  37899241 caactttctctctcatacttacatcat-attctcattttctctctctattgctttggtttttgtg 37899178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37899366 - 37899429
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    ||||||| |||||||||||||||| || ||||| | ||||||| |||||||||||| ||||||||    
T  37899366 caactttatctctcatactcacatcat-attctcattttctctctctattgctttggtttttgtg 37899429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 51255789 - 51255930
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||       |||||||||||||||||    
T  51255789 caactttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaatttggttgtcc 51255888  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51255889 aacaagttgtcacaataaatggttgtacaaataacattgctc 51255930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 38519836 - 38519977
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||       |||||||||||||||||    
T  38519836 caactttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtgccactatttaaatttctttgtaaaatttggttgtcc 38519935  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  38519936 aacaagttgtcacaataaatggttatacaaataacattgctc 38519977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 18315980 - 18316121
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||       ||| |||||||||||||    
T  18315980 caactttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtcc 18316079  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||| || |||||||||| |||||||||||||||    
T  18316080 aacaagttgtcataagaaatggttgttcaaataacattgctc 18316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39158148 - 39158289
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| ||  ||||||||||||| ||||||| |||| |||||||| | ||| |||||       ||| |||||||||||||    
T  39158148 caactttctctctcatactcacattattcttctactttctctttctattgttttggtttttgtgccgctacctaaatttctttgtataatttggttgtcc 39158247  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || ||||||||||||||||||||||| |||||||||||||||    
T  39158248 aataagttgtcacaataaatggttgttcaaataacattgctc 39158289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 5386415 - 5386556
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||||||||||||||||||| ||||||||||       ||| ||||| ||||||     
T  5386415 caactttctctctcatactcacattattcttttactttctctctctattgctttgatttttgtgttactatctaaatttctttgtataatttagttgtct 5386514  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || |||||||||||| |||||||||| |||||| ||||||||    
T  5386515 aaaaagttgtcacaagaaatggttgttcaaatatcattgctc 5386556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 54000741 - 54000878
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| ||||| |||||       ||| ||||| |||||||    
T  54000741 caactttctctctcatactcacattatcattttactttctctctctattgcttaaatttgtgtgccactacctaaatttctttgtataatttagttgtcc 54000840  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacatt 138  Q
    || | ||||||||||||||| ||||| |||||||||||    
T  54000841 aaaaggttgtcacaataaatagttgttcaaataacatt 54000878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 29227270 - 29227130
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    ||||||||||||||||| |||||  |  ||||||||||||| |||||||||||||| |||||||||||| |||||       ||| ||| ||||||||||    
T  29227270 aactttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgtcactacctaaatttctttgtataatatggttgtcca 29227171  T
Q  102 acaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||| ||||||||  ||| |||||| |||||||||||||||    
T  29227170 acaaattgtcacataaaaaggttgttcaaataacattgctc 29227130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 51577657 - 51577798
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||| ||||| |||||        || ||||| |||||||    
T  51577657 caactttctctctcatactcatattatcattttactttctctctctattgctttgatttttgtgccactacctaaatttctttatataatttagttgtcc 51577756  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || | |||||||||| |||||||| | |||||| || |||||    
T  51577757 aaaaggttgtcacaagaaatggttattcaaatatcactgctc 51577798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 41262369 - 41262234
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||| |||||||||  || ||||||||||| | ||||||||||||||||||||| || ||||||||       |||  ||||||||||| || |    
T  41262369 tttctctctcttactcacattgtccttctactttctttctctattgctttgatttttgtgccattatctaaatttctttgtattatttggttgtctaata 41262270  T
Q  105 agttgtcacaataaatggttgtacaaataacattgc 140  Q
     |||||||||| ||| |||||| |||||||||||||    
T  41262269 ggttgtcacaagaaaaggttgttcaaataacattgc 41262234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 40348840 - 40348908
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||||||||||||    
T  40348840 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactatct 40348908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5932792 - 5932717
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    |||||||||||||||||||||||| ||| || || | ||||||||||||| ||||||||||||||||||| |||||    
T  5932792 caactttctctctcatactcacattatccttttagtgtctctatctattgttttgatttttgtgtcactacctaaa 5932717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 52204897 - 52205032
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||||| ||||||||||||  |  ||||||||||||| |||||||||||||||||||||||||||  ||||        || |||||||||||||||||    
T  52204897 tttctctttcatactcacattgtttttctactttctctctctattgctttgatttttgtgtcactacttaaatttctttttataatttggttgtccaaca 52204996  T
Q  105 agttgtcacaataaatggttgtacaaataacattgc 140  Q
    |||| ||| || ||| | |||| ||||||| |||||    
T  52204997 agttatcataagaaaagattgttcaaataatattgc 52205032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10250544 - 10250475
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||| |||||    
T  10250544 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccacta 10250475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 37297095 - 37297160
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||| ||| || |||||||||| |||||||||||| ||||||||||||||    
T  37297095 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcacta 37297160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 39440530 - 39440595
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| ||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||    
T  39440530 tttctctttcatactcacattttcattttactttctctctctattgctttgatttttgtgtcacta 39440595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46634142 - 46634211
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| || |||||||||| |||||| ||||||||||||||||||||    
T  46634142 caactttatctctcatactcacattatctttttactttctctttctattactttgatttttgtgtcacta 46634211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51986084 - 51986153
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||||| |||||    
T  51986084 caactttctctctcatactcacattatctttttactttctctatctatttctttggtttttgtgccacta 51986153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 55266072 - 55266210
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||||||||||| ||||||  || || |||||||||| | |||| ||||||||||||||||||||||||||        || ||||| |||||  || |    
T  55266072 tttctctctcatattcacattgtccttttactttctctctttattactttgatttttgtgtcactatctaaatccatttatataatttagttgtataaga 55266171  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctca 143  Q
    |||| |||||||||| | |||| ||||||||||||||||    
T  55266172 agttatcacaataaaggattgttcaaataacattgctca 55266210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 14443245 - 14443382
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||||||||||||| | || || ||| |||||||||| ||||||||||| ||||||  | ||||| |||||       ||| ||||| ||||||||| |    
T  14443245 tttctctctcatacttatattattattttactttctctctctattgctttaatttttacgccactacctaaattcctttgtataatttagttgtccaaaa 14443344  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
     |||||||||| |||||||||| |||||| ||||||||    
T  14443345 ggttgtcacaaaaaatggttgttcaaatatcattgctc 14443382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 22813742 - 22813609
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagtt 108  Q
    |||||| |||||| ||  ||||| |||||| ||| ||||||||||||||||||||||||||| |||||        || |||||  ||||||||||||||    
T  22813742 tctctcgtactcatattgtcattttactttttctttctattgctttgatttttgtgtcactacctaaatttctttatataatttaattgtccaacaagtt 22813643  T
Q  109 gtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||| |||  |||||  ||||||||||||||    
T  22813642 gtcacaagaaaaagttgtttaaataacattgctc 22813609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 149513 - 149438
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    |||||||||||||||||||||||| ||  ||| ||||||||| |||||||||||  |||||||||||||| |||||    
T  149513 caactttctctctcatactcacattatgtttcaactttctctctctattgctttagtttttgtgtcactacctaaa 149438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 1816700 - 1816630
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaa 75  Q
    ||||| ||||||||||| || |||||| |||||| ||| ||||||||||||||||||||||||||| ||||    
T  1816700 tttctttctcatactcatattatcattttactttatctctctattgctttgatttttgtgtcactacctaa 1816630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 26600223 - 26600084
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||||||| |||||  |  ||||||||||| | ||||||||||| ||| ||||| ||||||||||        ||| ||| |||||||||||||    
T  26600223 tttctctctcatacacacattgttcttctactttctttctctattgcttttattattgtgccactatctaattctttttgtataatgtggttgtccaaca 26600124  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctcaa 144  Q
    | ||||||||  |||  ||||| |||||||||||||||||    
T  26600123 aattgtcacataaaaatgttgttcaaataacattgctcaa 26600084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 37997304 - 37997362
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||||    
T  37997304 tctctcatactcacattatctttttactttctctctctattgctttgatttttgtgtca 37997362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 2738295 - 2738161
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    |||||||||||||||| |||||| ||| ||||||||||||| |||||| |||||||| ||||| ||| | |||||       ||| |||||  |||||||    
T  2738295 aactttctctctcatattcacattatctttctactttctctctctatttctttgattgttgtgccacaacctaaaattctttgtataatttaattgtcca 2738196  T
Q  102 acaagttgtcacaataaatggttgtacaaataaca 136  Q
    | | |||||||||| ||||| ||||  ||||||||    
T  2738195 aaaggttgtcacaagaaatgattgtttaaataaca 2738161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2268536 - 2268464
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||||||| ||| || |||||| ||| ||||||| |||| ||||||||||| |||||    
T  2268536 caactttctctctcatactcacattatctttttactttttctttctattgttttggtttttgtgtcaatatct 2268464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 11068738 - 11068798
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    ||||||||| |||||| ||| || |||||||||| ||||||||||||||||||||||||||    
T  11068738 tctctcatattcacattatctttttactttctctctctattgctttgatttttgtgtcact 11068798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 43175027 - 43175095
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||||||||| ||  || |||||||||| ||||| |||||| ||||||||||||||    
T  43175027 aactttctctctcatactcacattatttttttactttctctctctatggctttggtttttgtgtcacta 43175095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19232162 - 19232099
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||| ||||||||||||||||||| ||  || |||||||||| |||||||||||||||||||||    
T  19232162 caaccttctctctcatactcacattatatttttactttctctctctattgctttgatttttgtg 19232099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 50506440 - 50506572
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||||||||||| |||||| ||||||||||| || ||||    |||||||||||| ||| ||||| |||||       ||| ||||| ||||||||| |    
T  50506440 tttctctctcatattcacattatcattctactctccctat----tgctttgatttt-gtgccactacctaaatttctttgtataatttagttgtccaaaa 50506534  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
     |||||||||| |||| ||||| |||||||||||||||    
T  50506535 ggttgtcacaagaaatagttgttcaaataacattgctc 50506572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 50890102 - 50890039
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || | |||||||| |||||||||||||||||||||    
T  50890102 caactttctctctcatactcacattatatttttgctttctctctctattgctttgatttttgtg 50890039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50831784 - 50831718
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||| ||||||||||||||| ||   | |||||||||| ||||||||||||||||||||||||    
T  50831784 caactttccctctcatactcacatcatgtctttactttctctctctattgctttgatttttgtgtca 50831718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23369361 - 23369292
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||| ||||||||| ||| || |||||| ||| |||||||||||| |||||||| |||||    
T  23369361 caactttctctctcttactcacattatctttttactttatctctctattgctttggtttttgtgccacta 23369292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31641594 - 31641525
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||| |||||||| ||  || |||||||| | || ||||||||||||||||||||||||    
T  31641594 caactttctctctcacactcacattatatttttactttctgtctccattgctttgatttttgtgtcacta 31641525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 36130381 - 36130268
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||| |||||||||| |||||  |  ||||||||| ||| |||||||| ||||||||||||||| || |||||       ||| ||| || ||||||    
T  36130381 caactttatctctcatacacacattgttcttctactttttctctctattgccttgatttttgtgtcattacctaaatttctttgtataatgtgattgtcc 36130282  T
Q  101 aacaagttgtcaca 114  Q
    ||||||||||||||    
T  36130281 aacaagttgtcaca 36130268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50608653 - 50608581
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||||||| |||||||||||| ||  || ||||| |||| |||||| ||||||||||||||||| |||||    
T  50608653 caactttctctttcatactcacattatttttttacttcctctctctattactttgatttttgtgtcaatatct 50608581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5622500 - 5622563
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||| |||||||||||| ||| || |||||| ||| |||||||||||| ||||||||    
T  5622500 caactttctctttcatactcacattatctttttactttttctctctattgctttggtttttgtg 5622563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 7632486 - 7632427
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||| |||||||||||| ||  || |||||||||| |||||||||||||||||||||    
T  7632486 tttctctttcatactcacattatatttttactttctctctctattgctttgatttttgtg 7632427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 10147080 - 10146980
Alignment:
Q  38 tctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacat 137  Q
    ||||| ||| ||||||| ||||||||||||||| |||||       ||| |||||| |||||||||||||| |||||| ||||| ||||  |||||||||    
T  10147080 tctctctcttttgcttttatttttgtgtcactacctaaatttctttgtataatttgattgtccaacaagttatcacaagaaatgattgtttaaataacat 10146981  T
Q  138 t 138  Q
    |    
T  10146980 t 10146980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24045287 - 24045351
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||| ||||||||||||||||||| ||  || ||||||||||  |||||||||||||||||||||||    
T  24045287 caaccttctctctcatactcacattatgtttttactttctct--ctattgctttgatttttgtgtca 24045351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 27051114 - 27051043
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||||||||||||||||||| ||| || ||| |||||| | ||||| |||| ||||||||||| |||||    
T  27051114 aactttctctctcatactcacattatctttttaccttctctctttattgttttggtttttgtgtcaatatct 27051043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36123488 - 36123425
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||| |||| ||  || |||||||||| |||||| ||||||||||||||    
T  36123488 caactttctctctcatacttacattatatttttactttctctctctattactttgatttttgtg 36123425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38338950 - 38338888
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| | | || |||||| ||| |||||||||||||||||||||    
T  38338950 caactttctctctcatactcacatta-ctttttactttatctctctattgctttgatttttgtg 38338888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38792918 - 38792858
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| ||  || |||||||||  ||||||||||||||||||||    
T  38792918 caactttctctctcatactcacattatatttttactttctc--tctattgctttgatttttgt 38792858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39606009 - 39606072
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||| || || |||| || ||||||||||| |||||||||    
T  39606009 caactttctctctcatactcacattatctttttattttccctctctattgctttaatttttgtg 39606072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49585037 - 49585100
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||||| ||||||    
T  49585037 caactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtg 49585100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5249911 - 5249977
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||||||| ||||||| |||| |||| ||||||    
T  5249911 caactttctctctcatactcacattatgtttttactttctctctctattgttttggttttcgtgtca 5249977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 16019531 - 16019585
Alignment:
Q  13 tcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||| ||  || |||||||||| ||||||||||||||||||||||||    
T  16019531 tcatactcacattatatttttactttctctctctattgctttgatttttgtgtca 16019585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28458405 - 28458340
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||||||||||||| ||||||    
T  28458405 caactttctctctcatactcacattat-tttttactttatctctctattgctttgattttcgtgtca 28458340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 31574964 - 31574906
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||| ||  || || ||||||| ||||||||||||||||||||    
T  31574964 tttctctctcatactcacattatatttttattttctctctctattgctttgatttttgt 31574906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 36177952 - 36178010
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||| ||| || |||||||| | |||||||||||| |||||||    
T  36177952 tttctctctcatactcacattatctttttactttctttctctattgctttggtttttgt 36178010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 19651904 - 19651810
Alignment:
Q  44 tctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacatt 138  Q
    |||||| ||||||||||| |||||||| |||||       ||| ||||| ||||||||| | |||||||||| |||||||||| |||||| ||||    
T  19651904 tctattactttgatttttatgtcactacctaaatttctttgtataatttagttgtccaaaaggttgtcacaaaaaatggttgttcaaatatcatt 19651810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 21014127 - 21014180
Alignment:
Q  88 aatttggttgtccaacaagttgtcacaataaatggttgtacaaataacattgct 141  Q
    |||||||||||  || |||||||||||||||| |||||| ||||||||||||||    
T  21014127 aatttggttgtataagaagttgtcacaataaaaggttgttcaaataacattgct 21014180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26732267 - 26732336
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| || || ||||||| ||||||| |||| |||||||| |||||    
T  26732267 caactttatctctcatactcacattatctttttattttctctctctattgttttggtttttgtgccacta 26732336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26910244 - 26910313
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||| || ||| || ||  || |||||||||| ||||||||||||||||||||| |||||    
T  26910244 caactttctctctcgtattcatattatttttttactttctctctctattgctttgatttttgtgccacta 26910313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29531635 - 29531566
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||||||| || ||| || || ||| ||| ||||||| |||| ||||||||||||||    
T  29531635 caactttctctctcatactcatattatctttttattttttctttctattgttttggtttttgtgtcacta 29531566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 50721772 - 50721707
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||| |||||||||||| ||  || |||||||||| |||| ||||||| |||||||||||    
T  50721772 aactttctctttcatactcacattatatttttactttctctctctactgctttggtttttgtgtca 50721707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 2004217 - 2004076
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||| |||| |||||||||   | ||||||||||||| |  ||||||||||||||||| |||||| |||||        ||  ||||| |||||     
T  2004217 caactttctatctcttactcacattgcccttctactttctctctacattgctttgatttttgtatcactacctaaatttctttatattatttgattgtct 2004118  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || | ||| |||||| ||| |||||| |||||||||||||||    
T  2004117 aataggttatcacaagaaaaggttgttcaaataacattgctc 2004076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32546385 - 32546324
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||| |||||||||||||||| ||  || |||||| ||| |||||||||||||||||||||    
T  32546385 caactttttctctcatactcacattat--ttttactttatctttctattgctttgatttttgtg 32546324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38134395 - 38134463
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    ||||||||| ||||||||| |||| ||| || |||||||| | ||||||| |||| |||||||||||||    
T  38134395 caactttctttctcatacttacattatctttttactttctttctctattgttttggtttttgtgtcact 38134463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44257758 - 44257694
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    |||||||||||||||||||||||| ||  || |||||||||| ||||||  |||||| |||||||    
T  44257758 caactttctctctcatactcacattatatttttactttctctctctattattttgatatttgtgt 44257694  T

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Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 336836 - 336773
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||| ||||||  |  || | |||||||| |||||||||||||||||||||    
T  336836 caactttctctctcatattcacattgtatttttgctttctctctctattgctttgatttttgtg 336773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 24575876 - 24575817
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||| ||||  || || |||||||||| |||||||||||| ||||||||    
T  24575876 tttctctctcatacttacattgtctttttactttctctctctattgctttggtttttgtg 24575817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25123300 - 25123237
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||| |||||||||||| |||||| ||| || |||||||||| |||||||||| | ||||||||    
T  25123300 caacgttctctctcatagtcacattatctttttactttctctctctattgcttaggtttttgtg 25123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29175269 - 29175333
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||| |||||||||||||||| ||| || |||||||||  ||| |||||||| |||||||||||    
T  29175269 caactttttctctcatactcacattatctttttactttctc--tctcttgctttggtttttgtgtca 29175333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37514160 - 37514102
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  37514160 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 37514102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42490951 - 42491002
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgct 52  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||||||    
T  42490951 caactttctctctcatactcacattatgtttttactttctctctctattgct 42491002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42815447 - 42815505
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  42815447 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 42815505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 38381101 - 38381043
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||||||| |||| ||  || || ||||||| ||||||||||||||||||||    
T  38381101 tttctctctcatacttacattatgtttttattttctctctctattgctttgatttttgt 38381043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 43902687 - 43902641
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||||||||||| |||||||||||||| ||| ||||| ||||||||    
T  43902687 ttctactttctctctctattgctttgatatttatgtcattatctaaa 43902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24509416 - 24509343
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| |||||||||||||||| ||  || |||||||||| ||||||  |||| |||  |||||||||||||    
T  24509416 caactttatctctcatactcacattatttttttactttctctctctattattttggtttccgtgtcactatcta 24509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 27965041 - 27965098
Alignment:
Q  13 tcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||| ||| || |||||||| |  ||||||||||| ||||||||||||||    
T  27965041 tcatactcacattatctttttactttctttccctattgctttggtttttgtgtcacta 27965098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29891887 - 29891952
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtc 66  Q
    |||||||||||||||||||||||| ||  || || ||||||| ||||||| |||| ||||| ||||    
T  29891887 caactttctctctcatactcacattatgtttttagtttctctttctattgttttggtttttatgtc 29891952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52895270 - 52895343
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| ||||||||| |||||| ||  || || ||| ||| ||||||||||||||||| |||||| ||||||    
T  52895270 caactttatctctcataatcacattatgtttttattttatctctctattgctttgattttcgtgtcaatatcta 52895343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 31559585 - 31559645
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    |||||||||||||||||||| ||  || |||||||||| ||||||| |||| |||| ||||    
T  31559585 tttctctctcatactcacattatatttttactttctctctctattgttttggttttcgtgt 31559645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31657689 - 31657752
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    |||||||||||||||||||||||| | | || |||||| ||| |||||||||||| |||| ||||    
T  31657689 caactttctctctcatactcacatta-ctttttactttatctctctattgctttggttttcgtgt 31657752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40693651 - 40693590
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||| ||||||||||||||||||| ||  || |||||||||  ||||||||||| |||||||||    
T  40693651 caaccttctctctcatactcacattatgtttttactttctc--tctattgctttaatttttgtg 40693590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 5e-50; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 48983696 - 48983555
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||       |||||||||||||||||    
T  48983696 caactttctctctcatactcacatgattattctactttctctttctattgctttgatttttgtgccattatctaaatttctttgtaaaatttggttgtcc 48983597  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  48983596 aacaagttgtcacaataaatggttgtaccaataacattgctc 48983555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 47642635 - 47642494
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| |||||  |||||||||| ||||||||||| |||||||||||||||||||||       ||| |||||||||||||    
T  47642635 caactttctctctcatactcacattatcatattactttctctttctattgctttaatttttgtgtcactatctaaatttctttgtataatttggttgtcc 47642536  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||| ||| |||||||||| |||||||||||||||    
T  47642535 aacaagttgtcccaaaaaatggttgttcaaataacattgctc 47642494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 48858866 - 48859010
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||       ||| ||||| |||||||    
T  48858866 caactttctctctcatactcacattatcattttacttcctctctctattgctttgatttttgtgtcactatctaaatttctttgtataatttagttgtcc 48858965  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctcaaa 145  Q
    || | |||||||||| |||||||||| || |||||||||||||||    
T  48858966 aaaaggttgtcacaagaaatggttgttcatataacattgctcaaa 48859010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 4213115 - 4213256
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||  |  |||||| |||||| |||||| ||||||||||||||||||||||||||        || |||||||||||      
T  4213115 caactttctctctcatactcacattgttcttctaccttctctctctattactttgatttttgtgtcactatctaaatctttttatataatttggttgtat 4213214  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || |||||||||||||||| |||||| |||||||||||||||    
T  4213215 aagaagttgtcacaataaagggttgttcaaataacattgctc 4213256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7919090 - 7918953
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||| ||  || ||||||||| ||| |||||| |||||||||||||| ||||| |||||       ||| ||||||||||||     
T  7919090 caactttctctctcatactcatattgtccttctactttatctctctattactttgatttttgtgccactacctaaatttctttgtataatttggttgtct 7918991  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacatt 138  Q
    ||||||||||||||| ||| |||||| |||||||||||    
T  7918990 aacaagttgtcacaagaaagggttgttcaaataacatt 7918953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 5771776 - 5771630
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactt----tctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggtt 96  Q
    |||||||||||||||||||||||| |||||| |||||    |||||||||||||||||||||||| || ||||| |||||       ||| ||||| |||    
T  5771776 caactttctctctcatactcacattatcattttactttctctctctatctattgctttgatttttctgccactacctaaatttctttgtataatttagtt 5771677  T
Q  97 gtccaacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    ||| || | |||||||||| ||||| |||| ||||||||||||||||    
T  5771676 gtctaaaaggttgtcacaagaaatgattgttcaaataacattgctca 5771630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 40439868 - 40439727
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||| |||||  |  ||||||||||||| |||||||||||||| |||||| ||||| |||||       ||| ||| |||||||||    
T  40439868 caactttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgacactacctaaatttctttgtataatgtggttgtcc 40439769  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||| ||||||||  ||| |||||| |||||||||||||||    
T  40439768 aacaaattgtcacataaaaaggttgttcaaataacattgctc 40439727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 42468635 - 42468776
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||| |||| || ||| |||||| ||| | ||||| ||| ||||||||||||||| |||||       ||| || || |||||||    
T  42468635 caactttctctctcatacttacattattattttactttatctctttattgttttaatttttgtgtcactacctaaatttctttgtataagttagttgtcc 42468734  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||| ||||||||| |||||||||| |||||| ||||||||    
T  42468735 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 42468776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 649811 - 649880
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| ||||||||||||||    
T  649811 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcacta 649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33100850 - 33100919
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| ||||||| |||||||||||||||||||    
T  33100850 caactttctctctcatactcacattatctttttactttctctctctattgttttgatttttgtgtcacta 33100919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 38878929 - 38878787
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||  |||||  |  ||||||||| ||| ||||||||||||||||||||||||||| |||||        || ||| | |||||||    
T  38878929 caactttctctctcatatacacattgttcttctactttttctttctattgctttgatttttgtgtcactacctaaatttctttatataatatagttgtcc 38878830  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    ||||||||||||||  |||  ||||| ||||||||||||||||    
T  38878829 aacaagttgtcacataaaaatgttgttcaaataacattgctca 38878787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8350225 - 8350158
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||||||| || |||||||||  |||||||||||| ||||||||||||||    
T  8350225 caactttctctctcatactcacatgatctttttactttctc--tctattgctttggtttttgtgtcacta 8350158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37685373 - 37685440
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||  |||||||||||||||||||||||||||    
T  37685373 caactttctctctcatactcacattatctttttactttctc--tctattgctttgatttttgtgtcacta 37685440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37700145 - 37700078
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||  |||||||||||||||||||||||||||    
T  37700145 caactttctctctcatactcacattatctttttactttctc--tctattgctttgatttttgtgtcacta 37700078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27465086 - 27465017
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||||||| || |||||| ||| |||||||||||| |||||||| |||||    
T  27465086 caactttctctctcatactcacatgatctttttactttgtctctctattgctttggtttttgtgccacta 27465017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35369742 - 35369811
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||| ||||||||||||||  || || |||||||||| |||||||||||||||||||||||||||    
T  35369742 caactttctatctcatactcacattgtctttttactttctctctctattgctttgatttttgtgtcacta 35369811  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12657265 - 12657329
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtc 66  Q
    ||||||||||||||||||||||| ||| || |||||||||| |||||||||||| ||||||||||    
T  12657265 aactttctctctcatactcacattatctttttactttctctttctattgctttggtttttgtgtc 12657329  T

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Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 51718655 - 51718586
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || ||| |||||| ||||||  |||||||||||||||||||    
T  51718655 caactttctctctcatactcacattatctttttaccttctctctctattattttgatttttgtgtcacta 51718586  T

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Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 31088224 - 31088292
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||| |||||||||||||||| ||| || |||||||||| |||||||||||| |||||||| |||||    
T  31088224 aactttttctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccacta 31088292  T

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Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 37275061 - 37274993
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||| |||||||||||| ||| || |||||||| | |||||||||||| ||||||||||||||    
T  37275061 aactttctctttcatactcacattatctttttactttctttctctattgctttggtttttgtgtcacta 37274993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9987994 - 9988057
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||| |||||||||||| ||  || |||||||||| |||||||||||||||||||||    
T  9987994 caactttctctttcatactcacattatatttttactttctctctctattgctttgatttttgtg 9988057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34818073 - 34818010
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||||| || ||  || |||||||||| |||||||||||||||||||||    
T  34818073 caactttctctctcatactcatattatatttttactttctctttctattgctttgatttttgtg 34818010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37619586 - 37619649
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||| || || ||||||| |||||||| ||||||||||||    
T  37619586 caactttctctctcatactcacattatctttttaatttctctctctattgcgttgatttttgtg 37619649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 44519180 - 44519117
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||| ||||| |||| ||| || |||||||||| |||||||||||||||||||||    
T  44519180 caactttctctcttatacttacattatctttttactttctctctctattgctttgatttttgtg 44519117  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 8846020 - 8846082
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||  || |||||| ||| |||||||||||| |||||||||||    
T  8846020 tttctctctcatactcacatgatgtttttactttttctttctattgctttggtttttgtgtca 8846082  T

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Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9566989 - 9566923
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||||||  |||||||||||| |||||||||||    
T  9566989 caactttctctctcatactcacattatgtttttactttctcactctattgctttggtttttgtgtca 9566923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17082771 - 17082664
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||| ||||| ||  ||||| ||||||| |||||| ||||||| |||||| ||||| |||||       ||| ||| |||||||||    
T  17082771 caactttctctctcatacacacattattcttctattttctctctctattactttgatatttgtgccactacctaaatttctttgtataatatggttgtcc 17082672  T
Q  101 aacaagtt 108  Q
    ||||||||    
T  17082671 aacaagtt 17082664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50775185 - 50775119
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||| |||||||||||    
T  50775185 caactttctctctcatactcacattatgtttttactttatctctctattgctttggtttttgtgtca 50775119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23645453 - 23645522
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| || |||||||||| ||||||| |||| |||||||| |||||    
T  23645453 caactttatctctcatactcacattatctttttactttctctctctattgttttggtttttgtgccacta 23645522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24806250 - 24806177
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||||||||||||||||||| || |||||| |||||| ||  ||  |||||||||||||||||||||| ||||||    
T  24806250 caactttctctctcatactcatattatcattttactttatc--tcgtttgctttgatttttgtgtcactgtctaaa 24806177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29359681 - 29359742
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||| || |||||||||  |||||||||||| ||||||||    
T  29359681 caactttctctctcatactcacattatctttttactttctc--tctattgctttggtttttgtg 29359742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12999851 - 12999788
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||||| ||||||    
T  12999851 caactttctctctcatactcacattatatttttactttctctttctattactttgatatttgtg 12999788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45065930 - 45065864
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| || ||||| | ||||||| |||||||||||| |||||||||||    
T  45065930 caactttctctctcatactcacatcat-attctcattttctctctctattgctttggtttttgtgtca 45065864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49570039 - 49570102
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||| |||||| ||  || |||||||||| ||||||| |||||||||||||    
T  49570039 caactttctctctcatattcacattatatttttactttctctctctattgttttgatttttgtg 49570102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52437537 - 52437596
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  52437537 caactttctctctcatactcacattatatttttactttatctttctattgctttgatttt 52437596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 15083075 - 15083013
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||| || | ||| || |||||||||| |||||||||||| |||||||||||    
T  15083075 tttctctctcatacttactttatctttttactttctctctctattgctttggtttttgtgtca 15083013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17652671 - 17652737
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||| ||||||||||||| ||  || |||||||| | |||||| |||||||||||||||||    
T  17652671 caactttctcgctcatactcacattatatttatactttctttctctattactttgatttttgtgtca 17652737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3851200 - 3851269
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||  ||| ||||||| |||| ||||| ||||||||    
T  3851200 caactttctctctcatactcacattatctttttacttgatctctctattgttttggtttttctgtcacta 3851269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4857953 - 4858022
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||| | |||||  |  ||||||||||||| |||||||||||||| |||||| |||||    
T  4857953 caactttctctctcatgcacacattgttcttctactttctctctctattgctttgatatttgtgccacta 4858022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15470085 - 15470024
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttg 62  Q
    |||||||||||||||||||||||| ||| || || ||||||| ||||||| |||| ||||||    
T  15470085 caactttctctctcatactcacattatctttttattttctctctctattgttttggtttttg 15470024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50726277 - 50726208
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||| | | |||| ||| || |||||||||| ||||||| ||||||||||||| |||||    
T  50726277 caactttctctctcacatttacattatctttttactttctctctctattgttttgatttttgtgccacta 50726208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14983815 - 14983887
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||||||||||||| |||||| ||  || |||||||||| ||||||| |||  ||||||||||| |||||    
T  14983815 caactttctctctcatattcacattatgtttttactttctctctctattgttttagtttttgtgtcaatatct 14983887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19055788 - 19055716
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||||||||| |||||||||| | | || |||||||||| ||||||| |||| |||||||| || |||||    
T  19055788 caactttctctcttatactcacattacctttttactttctctctctattgttttggtttttgtgacaatatct 19055716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10890074 - 10890016
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| | | || |||||| ||| |||||||||||||||||    
T  10890074 caactttctctctcatactcacatta-ctttttactttatctctctattgctttgatttt 10890016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33054116 - 33054054
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||| |||||||||||||||    
T  33054116 caactttctctctcatactcacattat-tttttactttatctctctatggctttgatttttgtg 33054054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35136887 - 35136949
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||| |||||||||||||| | | || |||||| ||| |||||||||||||||||||||    
T  35136887 caactttctttctcatactcacatta-ctttttactttatctctctattgctttgatttttgtg 35136949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 41070897 - 41070940
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||||||||||||||||||||||||||| ||||| || |||||    
T  41070897 tactttctctatctattgctttgatttttatgtcaatacctaaa 41070940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 46281479 - 46281537
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  46281479 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 46281537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 46300715 - 46300657
Alignment:
Q  11 tctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||| |||||||| ||||||||||||||||| ||||||| |||| |||||||| |||||    
T  46300715 tctcacactcacattatcattctactttctctttctattgttttg-tttttgtgccacta 46300657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47820529 - 47820470
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    ||||||||||| |||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  47820529 caactttctctttcatactcacatcatttttttactttatctctctattgctttgatttt 47820470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48220172 - 48220110
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||| ||||||||||||||    
T  48220172 caactttctctctcatactcacattat-tttttactttatctctctatttctttgatttttgtg 48220110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48326010 - 48326069
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    ||||||||||||||||||| |||| ||  || |||||| ||| |||||||||||||||||    
T  48326010 caactttctctctcatacttacattatttttttactttatctctctattgctttgatttt 48326069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49446826 - 49446763
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||| |||| ||  || |||||||||| |||||| ||||||| ||||||    
T  49446826 caactttctctctcatacttacattatatttttactttctctctctattactttgatatttgtg 49446763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 50932356 - 50932412
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||| ||| || ||||  |||| ||||||||||||||||||||||||    
T  50932356 tctctcatactcacataatctttttact--ctctttctattgctttgatttttgtgtca 50932412  T

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Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4466737 - 4466803
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||| ||||||| | |||| ||  || |||||||||| | ||||||||||||||||||||||    
T  4466737 caactttctgtctcatatttacattatgtttttactttctctttttattgctttgatttttgtgtca 4466803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14442302 - 14442368
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||| ||| ||| || ||  || |||||| ||||||| ||||||||||||||||||||    
T  14442302 caactttctctctgatattcatatcatgtttttactttatctatctgttgctttgatttttgtgtca 14442368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30745029 - 30745095
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||| ||||||||| || || ||| |||||| ||| ||||||| |||| |||||||||||    
T  30745029 caactttctctatcatactcatattataattttactttatctctctattgttttggtttttgtgtca 30745095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30766480 - 30766546
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||| ||||||||| || || ||| |||||| ||| ||||||| |||| |||||||||||    
T  30766480 caactttctctatcatactcatattataattttactttatctctctattgttttggtttttgtgtca 30766546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 2571681 - 2571746
Alignment:
Q  6 ttctctctcatactcacatgatcattctactttctctatctattgctttg-atttttgtgtcacta 70  Q
    |||||||||||| |||||| ||| || |||||| ||| ||||||| |||| |||||||||||||||    
T  2571681 ttctctctcatagtcacattatccttttactttttctctctattgttttgtatttttgtgtcacta 2571746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6340776 - 6340840
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||||||||| ||||| ||| |||||| ||| || |||||||||||||| |||||| ||||||    
T  6340776 tctctcatactcatatgat-attttactttatctctcaattgctttgattttcgtgtcaatatcta 6340840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26469401 - 26469470
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||| ||| | |||| ||| || || ||||||| |||||||||| | ||||||||||||||    
T  26469401 caactttctctcttatatttacattatctttttattttctctctctattgcttcggtttttgtgtcacta 26469470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 33070657 - 33070718
Alignment:
Q  13 tcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    |||||||||||| ||  || |||||||||| |||||| |||||||||  |||||||||||||    
T  33070657 tcatactcacataatttttttactttctctctctattactttgatttccgtgtcactatcta 33070718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37985415 - 37985346
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||| |||||||| | | || ||| || |||||||||| ||||||||||| ||||||||| |||||    
T  37985415 caactttcactctcatatttatattatctttttactttctctttctattgctttaatttttgtgacacta 37985346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43560247 - 43560320
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| |||||||||||||||| |   || |||||||||| |||||| ||||| |||  |||||||||||||    
T  43560247 caactttatctctcatactcacattaattttttactttctctctctattactttgttttccgtgtcactatcta 43560320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44914601 - 44914532
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||  |||| |||||||| ||| || || ||||||| |||||||||||  ||||||||||||||    
T  44914601 caactttctgcctcagactcacattatctttttattttctctctctattgctttagtttttgtgtcacta 44914532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 45333785 - 45333822
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||| | |||||||||||||||||||||||||    
T  45333785 tactttctctctttattgctttgatttttgtgtcacta 45333822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 49647177 - 49647113
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||| ||||||||| |||||| || ||| |||||||||| ||||||| |||| |||||||||||    
T  49647177 aactttatctctcatattcacattat-attttactttctctctctattgttttggtttttgtgtca 49647113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 49660222 - 49660295
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| |||||||||||||||| ||  || |||||||||| |||||| ||||| |||  |||||||| ||||    
T  49660222 caactttatctctcatactcacattatttttttactttctctctctattactttggtttccgtgtcactgtcta 49660295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26021104 - 26021033
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||||||| ||  || |||||| | | ||||||| ||||||| |||||||| |||||    
T  26021104 caactttctctctcatactcacat-atgtttttactttatatctctattgatttgattattgtgtcaatatct 26021033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 27742745 - 27742793
Alignment:
Q  94 gttgtccaacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||||| |||  ||| |||||| |||||||||||||||    
T  27742745 gttgtccaacaagttgttacataaaaaggttgttcaaataacattgctc 27742793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30536034 - 30536095
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||||||  |||||| ||||||| ||||||    
T  30536034 caactttctctctcatactcacattatatttttactttctc--tctattactttgatatttgtg 30536095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 48470685 - 48470753
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||| | | || |||||||||| ||||||| |||| ||| |||| || |||||    
T  48470685 tttctctctcatactcacattacctttttactttctctctctattgttttggtttctgtgccaatatct 48470753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51080119 - 51080055
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    ||||||||||||| || || |||| ||  || |||||||||| |||||||||||| |||||||||    
T  51080119 caactttctctctaatgcttacattatatttttactttctctctctattgctttggtttttgtgt 51080055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29525907 - 29526047
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||       |||||||||||||||||    
T  29525907 caactttctctctcatacttacatgatcattctactt-ctctctctattgttttgatttttgtgccactatctaaatttttttgtaaaatttggttgtcc 29526005  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29526006 aacaagttgtcacaataaatggttgtacaaataacattgctc 29526047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4494265 - 4494124
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||       ||| |||||||||||||    
T  4494265 caactttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtcc 4494166  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||| || |||||||||| |||||||||||||||    
T  4494165 aacaagttgtcataagaaatggttgttcaaataacattgctc 4494124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34307569 - 34307427
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||| ||||||||||||  |  ||||||||||||| |||||||||||| ||||||| |||||| |||||       ||| |||||||||||||    
T  34307569 caactttctctttcatactcacattgttcttctactttctctttctattgctttggtttttgtatcactacctaaatttctttgtataatttggttgtcc 34307470  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    || |||||||||||| ||| | |||| ||||||||||||||||    
T  34307469 aataagttgtcacaagaaaggattgttcaaataacattgctca 34307427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 32145994 - 32145873
Alignment:
Q  21 acatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaat 120  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||       |||||||||  || |||||||||||||| |  |||||    
T  32145994 acatgatcattctactttctctctctattgttttgatttttgtgtcactacctaaatttctttgtaaaatttaattatccaacaagttgtccccgtaaat 32145895  T
Q  121 ggttgtacaaataacattgctc 142  Q
    |||||| |||||||||||||||    
T  32145894 ggttgttcaaataacattgctc 32145873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 39714033 - 39713927
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaat 132  Q
    |||||||||| |||||||||||||||||||||| ||||||||||       ||| |||||||||||||||||| || |||||| |||||||||| |||||    
T  39714033 tactttctctctctattgctttgatttttgtgttactatctaaaattttttgtataatttggttgtccaacaaattatcacaaaaaatggttgttcaaat 39713934  T
Q  133 aacattg 139  Q
    |||||||    
T  39713933 aacattg 39713927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 9692769 - 9692901
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    |||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||  ||||        ||| ||||| |||||| |    
T  9692769 aactttctctctcatattcacattatcattttactttctctctctattgctttgatttttgtgtcactgcctaactttctttgtataatttagttgtcta 9692868  T
Q  102 acaagttgtcacaataaatggttgtacaaataa 134  Q
    | | |||||||||| |||||||||| |||||||    
T  9692869 aaaggttgtcacaagaaatggttgttcaaataa 9692901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 27168710 - 27168572
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||| || ||  |||||||| |||| |||||| |||||||||||||| |||||| ||||       ||| |||||||||||      
T  27168710 caactttctctctcatactcatattattcttctacttcctctctctattactttgatttttgtgccactatttaaatccctttgtataatttggttgtat 27168611  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattg 139  Q
    || ||||||||| |||||| |||||| ||||||||||||    
T  27168610 aagaagttgtcataataaagggttgttcaaataacattg 27168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 31104708 - 31104848
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    |||||||||| ||||| | ||||  || ||||||||||||| ||||||| ||||||||||||||||||| |||||       ||| ||||| |||||| |    
T  31104708 aactttctctttcatattaacattgtccttctactttctctctctattgttttgatttttgtgtcactacctaaatttcttcgtataatttagttgtcaa 31104807  T
Q  102 acaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||| ||||||||| |||  ||||| |||||||||||||||    
T  31104808 acaaattgtcacaagaaaaagttgttcaaataacattgctc 31104848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5114120 - 5114189
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||| |||||||| ||| || |||||||||| |||||||||||||||||||||||||||    
T  5114120 caactttctctctcacactcacattatctttttactttctctctctattgctttgatttttgtgtcacta 5114189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38926670 - 38926739
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| ||||||||||||||    
T  38926670 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcacta 38926739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41505533 - 41505602
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| ||||||||||||||    
T  41505533 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcacta 41505602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 288768 - 288840
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||||||||||||    
T  288768 caactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgtcactatct 288840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42358667 - 42358601
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||| || |||||| ||| ||||||||||||||||||||||||    
T  42358667 caactttctctctcatactcacattatctttttactttatctctctattgctttgatttttgtgtca 42358601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 41443215 - 41443078
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||||||||||||| ||  || |||||||||| ||||||| |||||||||||||  | || |||||       ||| ||||| ||||||||| |    
T  41443215 tttctctctcatactcacattattcttttactttctctctctattgttttgatttttgtgcaaatacctaaatttctttgtataatttagttgtccaaaa 41443116  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
     |||||||||| ||||| |||| |||||| ||||||||    
T  41443115 ggttgtcacaagaaatgattgttcaaatatcattgctc 41443078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 6178450 - 6178388
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||| ||  || |||||||||| ||||||||||||||||||||||||    
T  6178450 tttctctctcatactcacattatgtttttactttctctctctattgctttgatttttgtgtca 6178388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 34456834 - 34456977
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    |||||||||||||||||||| || ||| || |||||||||| ||||||||||| ||||||||| || || |||||       ||| ||||| |||||| |    
T  34456834 aactttctctctcatactcatattatctttttactttctctctctattgctttaatttttgtgccaatacctaaatttctttgtataatttagttgtcta 34456933  T
Q  102 acaagttgtcacaataaatggttgtacaaataacattgctcaaa 145  Q
    | |  ||||||||| ||||  |||| |||||| |||||||||||    
T  34456934 aaagattgtcacaagaaataattgttcaaatatcattgctcaaa 34456977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5244271 - 5244340
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||| |||||    
T  5244271 caactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccacta 5244340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16969595 - 16969526
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| ||||||| |||||||||| || |||||    
T  16969595 caactttctctctcatactcacattatctttttactttctctttctattgttttgatttttatgccacta 16969526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 20548015 - 20547950
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||| | ||| || |||||||||| ||||||||||||||||||||| |||||    
T  20548015 tttctctctcatactcacgttatctttttactttctctctctattgctttgatttttgtgccacta 20547950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 27541527 - 27541462
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||| |||||    
T  27541527 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccacta 27541462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35597204 - 35597273
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||  || |||||||||| ||||||| |||| ||||||||||||||    
T  35597204 caactttctctctcatactcacattatttttttactttctctctctattgttttggtttttgtgtcacta 35597273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52254167 - 52254098
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||| |||  || || |||||||||| |||||||||||| ||||||||||||||    
T  52254167 caactttctctctcatactcgcattgtctttttactttctctctctattgctttggtttttgtgtcacta 52254098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 52939701 - 52939762
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||| || |||||||||| |||||||||||| |||||||| |||||    
T  52939701 tctctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccacta 52939762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26014854 - 26014917
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||| || |||||||||| ||||||| |||| ||||||||    
T  26014854 caactttctctctcatactcacattatctttttactttctctctctattgttttggtttttgtg 26014917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26452751 - 26452693
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgattt 59  Q
    |||||||||||||||||||||||| ||  || |||||||||| ||||||||||||||||    
T  26452751 caactttctctctcatactcacattatatttttactttctctctctattgctttgattt 26452693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48353039 - 48353101
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||||||||||||| || ||  || |||||||||| ||||||||||||||||||||    
T  48353039 caactttctctctcatactcatattatatttttactttctctctctattgctttgatttttgt 48353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 50314671 - 50314733
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||| ||  || |||||||||| |||||| |||||||||||||||||    
T  50314671 tttctctctcatactcacattatgtttttactttctctctctattactttgatttttgtgtca 50314733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 52714777 - 52714839
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||| |||| ||  || |||||||||| |||||||||||||||||||||    
T  52714777 aactttctctctcatacttacattatatttttactttctctctctattgctttgatttttgtg 52714839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55361262 - 55361196
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||| |||||||||| ||  || |||||||||| |||||||||||| |||||||||||    
T  55361262 caactttctctcttatactcacattatttttttactttctctctctattgctttggtttttgtgtca 55361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36671043 - 36670974
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| || |||||| ||| |||||||||||| |||||||| |||||    
T  36671043 caactttttctctcatactcacattatctttttactttttctctctattgctttggtttttgtgccacta 36670974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44413949 - 44413879
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||||||| ||| || ||| |||||  |||||||||||| ||||||||||| |||||    
T  44413949 caactttctctctcatactcacattatctttttaccttctc--tctattgctttggtttttgtgtcaatatct 44413879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44855995 - 44856064
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||| ||||||||||||| | | || |||||||||| |||||| |||||||||||||| |||||    
T  44855995 caactttctcactcatactcacattacctttttactttctctctctatttctttgatttttgtgccacta 44856064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46623949 - 46624018
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||| ||| |||||| ||| || |||||||||| ||||||| |||| ||||||||||||||    
T  46623949 caactttctctctgatattcacattatctttttactttctctttctattgttttggtttttgtgtcacta 46624018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 7668212 - 7668144
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||||| |||||||||| ||| || |||||||||| |||||||||||| ||||| || ||||||||    
T  7668212 tttctctcttatactcacattatctttttactttctctctctattgctttggtttttatgccactatct 7668144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 19149033 - 19149101
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||||||||| ||| || |||||||||| | ||||| |||| |||||||| |||||    
T  19149033 aactttctctctcatactcacattatctttttactttctctctttattgttttggtttttgtgccacta 19149101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33939278 - 33939349
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactt--tctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||| |||||| ||| || |||||  ||||| |||||||||||| ||||||||||||||    
T  33939278 caactttctctctcatattcacattatctttttactttctctctctctattgctttggtttttgtgtcacta 33939349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26550280 - 26550343
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||| |||||| || ||| |||||||||| |||||| |||| |||||||||    
T  26550280 caactttctctctcatattcacattataattttactttctctctctattactttaatttttgtg 26550343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28700503 - 28700566
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||| |||||||||||||||| ||  || |||||||||| |||||||||||| ||||||||    
T  28700503 caactttatctctcatactcacattatgtttttactttctctctctattgctttggtttttgtg 28700566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35377110 - 35377047
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||| |||||||| ||  || |||||||| | |||||||||||||||||||||    
T  35377110 caactttctctctcacactcacattatgtttttactttctttctctattgctttgatttttgtg 35377047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 52326061 - 52326124
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||| ||||||| ||| || |||||||||| ||||||| |||| ||||||||    
T  52326061 caactttctctctcatgctcacattatctttttactttctctctctattgttttggtttttgtg 52326124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19150347 - 19150282
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||| | |||| || ||| |||||||||| ||||||| ||||||||||||||||    
T  19150347 caactttctctctcatatttacattat-attttactttctctctctattgttttgatttttgtgtca 19150282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34064134 - 34064060
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaa 75  Q
    ||||||| |||||||||||||||| ||  ||||||||||| | |||||| ||||||||||| | |||||| ||||    
T  34064134 caactttatctctcatactcacattatttttctactttctttctctattactttgatttttatatcactacctaa 34064060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39629867 - 39629801
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||| ||||||||||||||||||| ||  || |||||||||| ||||||| |||||||||| |||||    
T  39629867 caaccttctctctcatactcacattatgtttttactttctctctctattgttttgatttttatgtca 39629801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 42357103 - 42357044
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||| || |||| |||||  ||||||||||| ||||||||||||||    
T  42357103 tctctcatactcacatgatctttttactctctct--ctattgctttggtttttgtgtcacta 42357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 45711464 - 45711402
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||| ||| || |||||||||| ||||||| |||| || ||||||||    
T  45711464 tttctctctcatactcacattatctttttactttctctctctattgttttggttattgtgtca 45711402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13735171 - 13735240
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||| ||||||||||| || ||| || || ||||| | |||||||||||| ||||||||||||||    
T  13735171 caactttctttctcatactcatattatctttttattttctttctctattgctttggtttttgtgtcacta 13735240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37302588 - 37302657
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||| |||||| | | || |||||||||| |||||| ||||| |||||||| |||||    
T  37302588 caactttctctctcatattcacattacctttttactttctctctctattactttggtttttgtgccacta 37302657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 41309191 - 41309228
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41309191 tactttctctctctattgctttgatttttgtgtcacta 41309228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6093907 - 6093843
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    ||||||| |||||||||||| ||| ||| || |||||||||| |||||||||||| ||| |||||    
T  6093907 caactttatctctcatactcgcattatctttttactttctctctctattgctttggtttctgtgt 6093843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 7934021 - 7934088
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||| ||| |  |||||||||| | |||||||||| ||||| |||||||||||    
T  7934021 tttctctctcatactcacattatcttcttactttctctttttattgctttggttttt-tgtcactatct 7934088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 33472415 - 33472310
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaat 132  Q
    |||||||| | |||||| ||||||||||||| ||||||||||||       ||| |||||| ||||  || ||||||||| |||||| ||||||  ||||    
T  33472415 tactttctttttctattactttgatttttgtatcactatctaaatctctttgtataatttgattgtataagaagttgtcataataaagggttgtttaaat 33472316  T
Q  133 aacatt 138  Q
    ||||||    
T  33472315 aacatt 33472310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37503776 - 37503704
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||| ||| |||||||||||| |   || |||||||| | |||||||||||||||||||||||| |||||    
T  37503776 caactttatctttcatactcacattacttttttactttctttttctattgctttgatttttgtgtcaatatct 37503704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29573384 - 29573326
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  29573384 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 29573326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45186580 - 45186521
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||| ||||||| ||  || |||||||||| |||||| ||||||||||    
T  45186580 caactttctctctcatgctcacattatatttttactttctctctctattactttgatttt 45186521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49761215 - 49761152
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||| |||||||| ||  || |||||||||| |||||| ||||||| ||||||    
T  49761215 caactttctctctcacactcacattatatttttactttctctttctattactttgatatttgtg 49761152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49761350 - 49761412
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||| ||||||||    
T  49761350 caactttctctctcatactcacattat-tttttactttatctctctattgctttggtttttgtg 49761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 8847153 - 8847215
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||||||| ||  || |||||| ||| ||||||| |||| ||||||||    
T  8847153 aactttctctctcatactcacattatttttttactttttctttctattgttttggtttttgtg 8847215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10811178 - 10811244
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||||||||  |  || ||| |||||| |||||||||||| | |||||||||    
T  10811178 caactttctctctcatactcacattgtgtttttaccttctctctctattgctttggtatttgtgtca 10811244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 36756078 - 36756016
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||| |||||||||||| ||| ||  || || ||||||| |||||||||||||||||||||    
T  36756078 aactttttctctcatactcgcattatatttttattttctctctctattgctttgatttttgtg 36756016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 44463400 - 44463470
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatc 72  Q
    ||||||||||||||||||||||| ||  || || ||||||| ||| || ||||||||||||| ||| ||||    
T  44463400 aactttctctctcatactcacattatatttttattttctctttctgttactttgatttttgtatcaatatc 44463470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50876391 - 50876329
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||| ||||||||| || ||  || || ||||||| ||||||||||||||||||||    
T  50876391 caactttctctatcatactcatattatgtttttattttctctttctattgctttgatttttgt 50876329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53718090 - 53718143
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttg 55  Q
    ||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||    
T  53718090 caactttctctctcatactcatatgat-attttactttatctctctattgctttg 53718143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32205637 - 32205698
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttg 62  Q
    ||||||| |||||||||| ||||| ||| || || ||||||| |||||||||||| ||||||    
T  32205637 caactttatctctcatacccacattatctttttattttctctctctattgctttggtttttg 32205698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32362976 - 32363111
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||| |||||||||| |||||  |  || ||||||||||  ||||||||||||| ||| || ||||| |||||       ||| ||| |||||||||    
T  32362976 caactttatctctcatacacacattgttcttttactttctct--ctattgctttgatatttatgccactacctaaatctctttgtataatgtggttgtcc 32363073  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacatt 138  Q
    || || ||||||||  ||| |||||| |||||||||||    
T  32363074 aataaattgtcacatgaaaaggttgttcaaataacatt 32363111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46966129 - 46966064
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtc 66  Q
    ||||||||| |||||||||||| | ||  || |||||||||||||||||| |||| |||| |||||    
T  46966129 caactttctttctcatactcacgttatgtttttactttctctatctattgttttggttttcgtgtc 46966064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47472371 - 47472440
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||||||| || ||| || |||||||||| ||| ||| |||  |||||||| |||||    
T  47472371 caactttctctctcatactcatattatctttttactttctctctctgttgttttagtttttgtgccacta 47472440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 53681182 - 53681235
Alignment:
Q  89 atttggttgtccaacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||| ||||||||| | |||||||||| |||||||||| || ||||||||||||    
T  53681182 atttagttgtccaaaaggttgtcacaaaaaatggttgttcatataacattgctc 53681235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34662049 - 34662117
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    ||||||| |||||||||||||||| ||  || |||||| ||||| ||||  ||||||||| ||||||||    
T  34662049 caactttatctctcatactcacattatatttttactttatctatttattattttgattttcgtgtcact 34662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 44813470 - 44813410
Alignment:
Q  7 tctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||| ||  || |||||| ||| |||||||||||| |||| ||||||    
T  44813470 tctctctcatactcacattatatttttactttatctctctattgctttggttttcgtgtca 44813410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 50559236 - 50559180
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgattttt 61  Q
    ||||||||||||||| |||| ||  || |||||||||| ||||||| ||||||||||    
T  50559236 tttctctctcatacttacattatgtttttactttctctctctattgttttgattttt 50559180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 54099385 - 54099325
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgattttt 61  Q
    ||||||||||||| || |||| || ||  || |||||||||| ||||||||||||||||||    
T  54099385 caactttctctcttatgctcatattatatttttactttctctctctattgctttgattttt 54099325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 44061760 - 44061897
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||| |||||||||||||||||||||||||||||       ||| |||||||||||||    
T  44061760 caactttctctctcatactcacattatcattttactttctctttctgttgctttgatttttgtgtcactatctaaatttctttgtataatttggttgtcc 44061859  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacatt 138  Q
    ||||| || |||||| |||| ||||| |||||||||||    
T  44061860 aacaaattatcacaagaaatagttgttcaaataacatt 44061897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25987815 - 25987678
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| |||||       ||| ||||| ||||| |    
T  25987815 caactttatctctcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttagttgttc 25987716  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacatt 138  Q
    || | |||||||||| |||||||||| |||||||||||    
T  25987715 aaaaggttgtcacaagaaatggttgttcaaataacatt 25987678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26026939 - 26027080
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||| |||||||||||||| |||||| || ||||||| ||||||||||| |||||||| ||||||||||||       ||| |||||||||| ||    
T  26026939 caactttctttctcatactcacattatcattttattttctctttctattgctttaatttttgtatcactatctaaatttctttgtataatttggttggcc 26027038  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||| |||| | ||| |||||||||||||||    
T  26027039 aacaagttgtcacaagaaatagctgttcaaataacattgctc 26027080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 5601007 - 5600903
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagtt 108  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||    
T  5601007 tctctcatactcacatgattattctactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaatttggttgtccaacaagtt 5600908  T
Q  109 gtcac 113  Q
     ||||    
T  5600907 atcac 5600903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 5639613 - 5639717
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagtt 108  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||    
T  5639613 tctctcatactcacatgattattctactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaatttggttgtccaacaagtt 5639712  T
Q  109 gtcac 113  Q
     ||||    
T  5639713 atcac 5639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33451591 - 33451452
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||||| ||||| || ||       ||| |||||| |||||     
T  33451591 caactttctctctcatactcacattgtc-ttctactttctctctctattgctttgatttttgtgccactacct-aatttctttgtataatttgattgtct 33451494  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||| ||| |||||| |||||||||||||||    
T  33451493 aacaagttgtcacaagaaagggttgttcaaataacattgctc 33451452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 44090933 - 44091070
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||||||| |||||  |  ||||||||||||| ||||||||||||||||||||||||||| |||||       ||| ||| ||||||||||| |    
T  44090933 tttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaaaa 44091032  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||  ||| |||||| |||||||||||||||    
T  44091033 agttgtcacatgaaaaggttgttcaaataacattgctc 44091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1068649 - 1068790
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||| |||||  |  ||||||||||||| |||||||||||||| |||||  ||||| |||||       ||| ||| |||||||||    
T  1068649 caactttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtaacactacctaaatttctttgtataatgtggttgtcc 1068748  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||  ||| |||||| |||||||||||||||    
T  1068749 aacaagttgtcacataaaaaggttgttcaaataacattgctc 1068790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27325800 - 27325869
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||||||||| |||||||| |||||    
T  27325800 caactttctctctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccacta 27325869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15717004 - 15716863
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||| ||||||||||  ||||  |  ||||||||||||| |||||||||||||| ||||| |||||| |||||       ||| ||| |||||||||    
T  15717004 caactttttctctcatacatacattgttcttctactttctctctctattgctttgatatttgtatcactacctaaatttctttgtataatgtggttgtcc 15716905  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||||||  |||  ||||| |||||||||||||||    
T  15716904 aacaagttgtcacataaaaaagttgttcaaataacattgctc 15716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 34435761 - 34435624
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||||||| |||||  |  |||||||||| || |||||||||||||| |||||| ||||| |||||       ||| ||| ||||||| |||||    
T  34435761 tttctctctcatacacacattgttcttctactttcgctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtgcaaca 34435662  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||  ||| |||||| |||||||||||||||    
T  34435661 agttgtcacataaaaaggttgttcaaataacattgctc 34435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2730989 - 2730849
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||| |||||| ||| || |||||||||| || | |||||||||||||||| |||||||||||       ||| ||||| ||| | |    
T  2730989 caactttctctctcatattcacattatctttttactttctctctcaactgctttgatttttgtgccactatctaaatttatttgtataatttagttattc 2730890  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgct 141  Q
    || | |||||||||| |||| ||||| |||||| |||||||    
T  2730889 aaaaggttgtcacaagaaattgttgttcaaatatcattgct 2730849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 28772151 - 28772013
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    ||||||||||||||||| ||| | |||||| |||  ||||| | ||||| ||||||||||||| ||||| |||||       ||| ||||| ||||||||    
T  28772151 aactttctctctcatacccactttatcattttac--tctctctttattgttttgatttttgtgccactacctaaatttctttgtataatttagttgtcca 28772054  T
Q  102 acaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    | | |||||||||| |||||||||| |||||| ||||||||    
T  28772053 aaaggttgtcacaagaaatggttgttcaaatatcattgctc 28772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33107895 - 33107754
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||| ||||||| |||||  |  ||||||||||||| ||| |||||||||| ||||||  |||| |||||       ||| ||| |||||||||    
T  33107895 caactttctccctcatacacacattgttcttctactttctctctctgttgctttgatatttgtgcaactacctaaatttctttgtataatgtggttgtcc 33107796  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||| ||||||||  ||| |||||| |||||||||||||||    
T  33107795 aacaaattgtcacataaaaaggttgttcaaataacattgctc 33107754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 45406004 - 45405880
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagtt 108  Q
    ||||||||||||||||   | ||||||||||||| ||||||| |||||||||||||| | ||| ||||       ||| |||||||||||||||||||||    
T  45406004 tctctcatactcacattgcccttctactttctctctctattgttttgatttttgtgttattatataaatttatttgtataatttggttgtccaacaagtt 45405905  T
Q  109 gtcacaataaatggttgtacaaata 133  Q
     ||| || |||||||| | ||||||    
T  45405904 ctcataagaaatggttattcaaata 45405880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 37172102 - 37172247
Alignment:
Q  1 caactttctc-tctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtc 99  Q
    |||||||||| ||||||||| |||   || ||||| ||||||| || ||| ||||||||||||||||| || |||||       ||| ||||||||||||    
T  37172102 caactttctcctctcatacttacactgtccttctattttctctttccattactttgatttttgtgtcattacctaaatttctttgtataatttggttgtc 37172201  T
Q  100 caacaagttgtcacaataaatggttgtacaaataacattgctcaaa 145  Q
    |||||| |||| |||| |||   |||| ||||||||||||||||||    
T  37172202 caacaaattgttacaagaaaaaattgttcaaataacattgctcaaa 37172247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43397823 - 43397895
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||| |||||||| ||||||||    
T  43397823 caactttctctctcatactcacattatttttttactttctctttctattactttggtttttgtgccactatct 43397895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10902747 - 10902810
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||| |||||||| ||  || |||||||||| |||||||||||||||||||||    
T  10902747 caactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtg 10902810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 12241144 - 12241256
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtaca 129  Q
    |||||| || ||| |||||||||||||||||| ||||||||||||||       ||| ||| |||||||||||||| || |||||  |||  ||||| ||    
T  12241144 ttctacattatctctctattgctttgatttttatgtcactatctaaatttctttgtataatgtggttgtccaacaaattatcacataaaaaagttgttca 12241243  T
Q  130 aataacattgctc 142  Q
    |||||||||||||    
T  12241244 aataacattgctc 12241256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35067203 - 35067266
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||||||||| ||||||||    
T  35067203 caactttctctctcatactcacattatatttttactttctctctctattgctttggtttttgtg 35067266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6440124 - 6440190
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||||||| | | ||||||||||||||||||||    
T  6440124 caactttctctctcatactcacattatatttttactttctctctttcttgctttgatttttgtgtca 6440190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10731588 - 10731654
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||| | ||||||| || ||| || |||||||||| ||||||||||||||||||||||||    
T  10731588 caactttctcttttatactcatattatctttttactttctctctctattgctttgatttttgtgtca 10731654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11253571 - 11253505
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||| |||| ||| || || ||||||| |||||||||||| |||||||||||    
T  11253571 caactttctctctcatacttacattatctttttattttctctctctattgctttggtttttgtgtca 11253505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36660479 - 36660413
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||| |||| ||| || |||||||||| |||||||||||| || ||||||||    
T  36660479 caactttctctctcatacttacattatctttttactttctctctctattgctttggttattgtgtca 36660413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5277528 - 5277459
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| || |||||||||| ||||||||||   ||||||||||||||    
T  5277528 caactttatctctcatactcacattatctttttactttctctctctattgcttaagtttttgtgtcacta 5277459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10692481 - 10692550
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| || |||||||||| ||||||| |||| |||||||| |||||    
T  10692481 caactttatctctcatactcacattatctttttactttctctctctattgttttggtttttgtgccacta 10692550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 32501221 - 32501156
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||| ||  || ||| |||||| |||||| ||||||||||||||||||||    
T  32501221 tttctctctcatactcacattatttttttacgttctctctctattactttgatttttgtgtcacta 32501156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12898958 - 12898886
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||| |||||||||||||||| ||| || |||||| ||| |||||||||||| |||||| | ||||||||    
T  12898958 caactttttctctcatactcacattatctttttactttatctctctattgctttggtttttgcgccactatct 12898886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24798386 - 24798326
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgattttt 61  Q
    |||||||||||||||||||||||| ||  || |||||||||| ||||||| ||||||||||    
T  24798386 caactttctctctcatactcacattatatttttactttctctttctattgttttgattttt 24798326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 22719486 - 22719545
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||| ||||||| ||| || |||||||||| |||||||||||| ||||||||    
T  22719486 tttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtg 22719545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25830274 - 25830211
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||||| ||||||    
T  25830274 caactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtg 25830211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 36816640 - 36816581
Alignment:
Q  6 ttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    |||||| |||||||||||| ||| || |||||| ||| ||||||||||||||||||||||    
T  36816640 ttctctatcatactcacattatctttttactttttctctctattgctttgatttttgtgt 36816581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37449454 - 37449391
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||| |||||||||||||||| ||| || |||||||| | |||||||||||| ||||||||    
T  37449454 caactttttctctcatactcacattatctttttactttctgtctctattgctttggtttttgtg 37449391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 10839506 - 10839448
Alignment:
Q  6 ttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||| |||| ||  || ||||||||||||||||||||||| ||||||||    
T  10839506 ttctctctcatacttacattatgtttttactttctctatctattgctttggtttttgtg 10839448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 31249545 - 31249491
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||| ||| || |||||||||| |||||||||||| |||||||    
T  31249545 tctctcatactcacattatctttttactttctctctctattgctttggtttttgt 31249491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34718158 - 34718219
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||||||||||||||||    
T  34718158 caactttctctctcatactcacattat-tttttactttatctctctattgctttgatttttgt 34718219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37133891 - 37133825
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||| ||||||| ||||| || ||  || |||||||||| ||||||||||||||||||||||||    
T  37133891 caactttttctctcacactcatattatgtttttactttctctttctattgctttgatttttgtgtca 37133825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 42652639 - 42652779
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcca 101  Q
    |||||||||||| ||||||||||  |  |||||| ||||||  ||||| |||| ||||| ||| |||||||||||        || ||||| |||||  |    
T  42652639 aactttctctctgatactcacattgttcttctacattctct--ctattactttaattttcgtgccactatctaaatccatttatataatttagttgtata 42652736  T
Q  102 acaagttgtcacaataaatggttgtacaaataacattgctcaa 144  Q
    | ||||||||||||||||  ||||| |||||||||||||||||    
T  42652737 aaaagttgtcacaataaagagttgttcaaataacattgctcaa 42652779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43715917 - 43715979
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||||| |||||    
T  43715917 caactttctctctcatactcacattatatttttactttctctctctattactttgatatttgt 43715979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 44825493 - 44825547
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||| ||   |||||||||||| ||||||||||||||||||||    
T  44825493 tctctcatactcacattatttatctactttctctctctattgctttgatttttgt 44825547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5740814 - 5740749
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtc 66  Q
    ||||||| |||||||||||||||| ||  || |||||||||| ||||||| |||| ||||||||||    
T  5740814 caactttttctctcatactcacattatgtttttactttctctctctattgttttggtttttgtgtc 5740749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34186649 - 34186718
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||| | |||||||||| ||| || || ||||||| |||||| ||||| ||||||||||||||    
T  34186649 caactttctcttttatactcacattatctttttattttctctctctattactttggtttttgtgtcacta 34186718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42768248 - 42768314
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    ||||||| |||||||||||||||| ||  || |||||||||  |||||||||||| |||||||||||||    
T  42768248 caactttttctctcatactcacattatttttttactttctc--tctattgctttggtttttgtgtcact 42768314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3946283 - 3946346
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || ||||| | ||||||| |||||||||||| ||||||||    
T  3946283 caactttctctctcatactcacatcat-attctcattttctctctctattgctttggtttttgtg 3946346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 4054314 - 4054246
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||| ||| ||||| |||||| ||| || |||||||||| | |||||||||| ||||||||||||||    
T  4054314 aactttatctttcatattcacattatctttttactttctctctttattgctttggtttttgtgtcacta 4054246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7777208 - 7777144
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    ||||||||||||| |||||||||| ||  || |||||||||| |||||| ||||||| |||||||    
T  7777208 caactttctctcttatactcacattatatttttactttctctctctattactttgatatttgtgt 7777144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 11134712 - 11134768
Alignment:
Q  87 aaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    ||||||| |||||||||||||| |||||| ||||  |||| ||||||||||||||||    
T  11134712 aaatttgtttgtccaacaagttatcacaagaaatatttgttcaaataacattgctca 11134768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43285991 - 43285931
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgattttt 61  Q
    |||||||||||||||||||||||| ||  || |||||||||| | |||||||||| |||||    
T  43285991 caactttctctctcatactcacattatatttttactttctctctttattgctttggttttt 43285931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16613677 - 16613739
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||| |||||||||||||||| ||  || |||||| ||| |||||||||||||||||||||    
T  16613677 caactttttctctcatactcacattattttt-tactttatctctctattgctttgatttttgtg 16613739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30439534 - 30439476
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  30439534 caactttctctctcatactcacattat-tttttactttatctctctattgctttgatttt 30439476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32954883 - 32954949
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||| |||||||||| || ||||| | ||||||| |||||||||||| |||||||||||    
T  32954883 caactttctctctgatactcacatcat-attctcattttctctctctattgctttggtttttgtgtca 32954949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38675646 - 38675709
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||| ||||| ||  || |||||||||| |||||| ||||| ||||||||    
T  38675646 caactttctctctcatacccacattatatttttactttctctctctatttctttggtttttgtg 38675709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44064400 - 44064466
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtgtca 67  Q
    |||| |||||| |||||||||||| || ||||| | ||||||| ||||||||||||||||||||||||    
T  44064400 caaccttctctttcatactcacatcat-attctcattttctctctctattgctttgatttttgtgtca 44064466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10592309 - 10592243
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||| | | || ||  || |||||||||| |||||||||||| |||||||||||    
T  10592309 caactttctctctcatatttatattatgtttttactttctctctctattgctttggtttttgtgtca 10592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39211084 - 39211150
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||||||||  |  || |||||| ||| ||||||| |||| |||||||||||    
T  39211084 caactttctctctcatactcacattttgtttttactttttctctctattgttttggtttttgtgtca 39211150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 39856115 - 39856153
Alignment:
Q  36 tttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  39856115 tttctctctctattgctttgatttttgtgtcaatatcta 39856153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45405574 - 45405640
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||| ||| ||||| |||||| ||  || |||||||||| ||||||||||||||||| ||||||    
T  45405574 caactttttctttcatattcacattatatttttactttctctctctattgctttgattttcgtgtca 45405640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 157098 - 157170
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||||||||||||||| |||| ||  || |||||| ||| || |||||||||||||| |||||| ||||||    
T  157098 caactttctctctcatacttacattatatttttactttatct-tcgattgctttgattttcgtgtcaatatcta 157170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 3413215 - 3413158
Alignment:
Q  7 tctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||| ||  || |||||||| | |||||||||||| ||||||||    
T  3413215 tctctctcatactcacattatatttttactttctttttctattgctttggtttttgtg 3413158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7271894 - 7271964
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||| |||||||||||||||| |   || |||  ||||| |||||||||||| |||||||||||||||||    
T  7271894 caactttatctctcatactcacattaattttttac--tctctctctattgctttggtttttgtgtcactatct 7271964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 8671583 - 8671522
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    ||||||||||||||||||| ||| ||  || |||||| ||| |||||| |||||||||||||    
T  8671583 aactttctctctcatactcgcattatatttttactttatctctctattactttgatttttgt 8671522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34490185 - 34490123
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgt 65  Q
    ||||||||||||| |||||||||| ||  || |||||| ||| ||||||||||||||||| ||||    
T  34490185 caactttctctcttatactcacattat--ttttactttatctttctattgctttgattttcgtgt 34490123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 36885513 - 36885451
Alignment:
Q  3 actttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||| ||  || |||||| ||| | ||||||||||||||| ||||||    
T  36885513 actttctctctcatactcacattat--ttttactttatctctttattgctttgattttcgtgtca 36885451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 41639820 - 41639760
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatct--attgctttgatttttgtgtca 67  Q
    |||||||||||||||| ||  || |||||||||| |||  |||||||||||||||||||||    
T  41639820 tctctcatactcacattatatttttactttctctctctctattgctttgatttttgtgtca 41639760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 6445220 - 6445292
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    |||||||||| | |||||||||| ||  || |||||| ||| ||||||| |||||||||||||| | ||||||    
T  6445220 aactttctcttttatactcacataatgtttttactttatctctctattgttttgatttttgtgttaatatcta 6445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 7598753 - 7598817
Alignment:
Q  3 actttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||| ||  || ||||||||| || ||||| |||| ||||| |||||    
T  7598753 actttctctctcatactcacattatgtttttactttctcaatatattgttttggtttttatgtca 7598817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13970962 - 13971022
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||||| || || ||| || ||||||  |||||||||||||||||||||    
T  13970962 caactttctctctcatactcatattat-attttattttctc--tctattgctttgatttttgtg 13971022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 32020493 - 32020426
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctat--ctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||| ||| ||  || |||||||||| |  |||||||||||||||| ||||||    
T  32020493 aactttctctctcatactcgcattatgtttttactttctctctcgctattgctttgattttcgtgtca 32020426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37657032 - 37657095
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || ||||| | ||||||| ||| |||||||| ||||||||    
T  37657032 caactttctctctcatactcacatcat-attctcattttctctctctgttgctttggtttttgtg 37657095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8515 - 8658
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||| | |||||        || ||||| ||||||     
T  8515 caactttctctctcatactcacattgtccttctactttctctttctattgctttgatttttgtgtcaccaactaaatttctttatataatttagttgtct 8614  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctcaa 144  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||    
T  8615 aacaagttgtcacaagaaatagttgttcaaataacattgctcaa 8658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 8645351 - 8645493
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||| || ||||||| |||||       ||| ||||| |||||||    
T  8645351 caactttctctctcatactcacattatccttttactttctctctctattgctttgatttatgcgtcactacctaaatttctttgtataatttagttgtcc 8645450  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    || | |||||||||| |||||||||| |||||| |||||||||    
T  8645451 aaaaggttgtcacaagaaatggttgttcaaatatcattgctca 8645493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 18065118 - 18064980
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||| |||||||||| |||||  |  ||||||||||||| |||||||||||||| |||||| ||||| |||||       ||| ||| |||||||||    
T  18065118 caactttttctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtcc 18065019  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattg 139  Q
    ||||||||||||||  |||  ||||| ||||||||||||    
T  18065018 aacaagttgtcacataaaaaagttgttcaaataacattg 18064980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5739792 - 5739651
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||| ||| ||||||| ||  || ||||| ||||||| ||||||||||||||||||||||||||| ||||         |  |||||| ||||||    
T  5739792 caactttctttcttatactcatattgtccttctaatttctctttctattgctttgatttttgtgtcactacctaattttctttatttaatttgattgtcc 5739693  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||||| || |||||| ||| |||||||||||||||    
T  5739692 aacaagttgtcataagaaatggatgttcaaataacattgctc 5739651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 33712363 - 33712504
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||| |||||  |  ||||||||||||| ||| |||||||||| ||||||  |||| |||||       ||| ||| |||||||||    
T  33712363 caactttctctctcatacacacattgttcttctactttctctctctgttgctttgatatttgtgcaactacctaaatttctttgtataatgtggttgtcc 33712462  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    |||||||||| |||  ||| |||||| |||||||||||||||    
T  33712463 aacaagttgttacataaaaaggttgttcaaataacattgctc 33712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11635563 - 11635430
Alignment:
Q  1 caactttctctctcatactcacat-gatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtc 99  Q
    ||||||||||||||||| |||||| | || ||||| ||||||| |||||| |||||||||||||| |||||||||||       ||| |||||||||||     
T  11635563 caactttctctctcatattcacattgctc-ttctattttctctctctattactttgatttttgtgccactatctaaatctctttgtataatttggttgta 11635465  T
Q  100 caacaagttgtcacaataaatggttgtacaaataa 134  Q
     || || ||||||||||||| |||||| |||||||    
T  11635464 taagaaattgtcacaataaagggttgttcaaataa 11635430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25811867 - 25811799
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||| ||||    
T  25811867 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccact 25811799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22079592 - 22079526
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||| |||||||| ||  || |||||||||| ||||||||||||||||||||||||    
T  22079592 caactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgtca 22079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 8505802 - 8505660
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaattt-ggttgtc 99  Q
    ||||||||||||||||| |||||| ||| || |||||| ||| ||||||||||||||||||||   |||| |||||       ||| |||||  ||||||    
T  8505802 caactttctctctcatattcacattatccttttactttttctctctattgctttgatttttgtacaactacctaaatttctttgtataatttaagttgtc 8505703  T
Q  100 caacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||| || ||||||||| ||||| |||| |||||| ||||||||    
T  8505702 caaaaaattgtcacaagaaatgattgttcaaatatcattgctc 8505660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 1286993 - 1287097
Alignment:
Q  38 tctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacat 137  Q
    ||||| || ||| ||||||||||||||||||||||||||       ||| ||||| |||||  || |||||||||||||||| | |||| ||||||||||    
T  1286993 tctctctcgattactttgatttttgtgtcactatctaaattcttttgtataatttagttgtataagaagttgtcacaataaaggattgttcaaataacat 1287092  T
Q  138 tgctc 142  Q
    |||||    
T  1287093 tgctc 1287097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 14910227 - 14910360
Alignment:
Q  8 ctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagt 107  Q
    ||||||||||||| ||| |||||| || ||| ||| ||||||||||||||||||||||||||| |||||       ||| ||||| ||||||||| | ||    
T  14910227 ctctctcatactc-cattatcattgtattttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttagttgtccaaaaggt 14910325  T
Q  108 tgtcacaataaatggttgtacaaataacattgctca 143  Q
    | ||| || |||| ||||| |||||||| |||||||    
T  14910326 tctcaaaagaaat-gttgttcaaataacgttgctca 14910360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 17182172 - 17182283
Alignment:
Q  32 ctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaa 131  Q
    ||||||| ||| |||||| ||||||||||| || |||||||||||       ||| |||||| ||||  || ||||||||| |||||| |||||| ||||    
T  17182172 ctactttttctctctattactttgatttttatgccactatctaaatccctttgtataatttgattgtataagaagttgtcataataaagggttgttcaaa 17182271  T
Q  132 taacattgctca 143  Q
    ||||||||||||    
T  17182272 taacattgctca 17182283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 552835 - 552904
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| ||||||||| |||||| ||| || |||||||||| |||||||||||| |||||||| |||||    
T  552835 caactttgtctctcatattcacattatctttttactttctctctctattgctttggtttttgtgccacta 552904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5080596 - 5080527
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||| |||||||||||| ||  || |||||||||| |||||||||||  ||||||||||||||    
T  5080596 caactttctctttcatactcacattatttttttactttctctctctattgctttagtttttgtgtcacta 5080527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 8098618 - 8098557
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||  || || |||||||||| |||||||||||| ||||||||||||||    
T  8098618 tctctcatactcacattttctttttactttctctctctattgctttggtttttgtgtcacta 8098557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15974650 - 15974719
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||| |||||| ||| || || ||||||| |||||||||||| ||||||||| ||||    
T  15974650 caactttctctctcatattcacattatctttttattttctctctctattgctttggtttttgtgttacta 15974719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 3853335 - 3853264
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||| |||| | ||  ||  ||||||||| |||||||||||||||||||||||| |||||    
T  3853335 aactttctctctcataatcaccttatgttttaactttctctctctattgctttgatttttgtgtcaatatct 3853264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28630141 - 28630204
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||   | |||||||||| |||||| ||||||||||||||    
T  28630141 caactttctctctcatactcacattatatatttactttctctttctattactttgatttttgtg 28630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 32316954 - 32316891
Alignment:
Q  4 ctttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||| |||||||||||| ||| || |||||| ||| |||||||||||| |||||||||||    
T  32316954 ctttctctttcatactcacattatctttttactttatctctctattgctttggtttttgtgtca 32316891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17551407 - 17551341
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||| |||| |||||||||||    
T  17551407 caactttctctctcatactcacattatgtttttactttatctctctattgttttggtttttgtgtca 17551341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 26595399 - 26595457
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||| ||  || |||||||||| |||||||||||| |||||||||||    
T  26595399 tctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtca 26595457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31883332 - 31883266
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||  ||||||||||||||| ||   | |||||||||| ||||||||||||||||||||||||    
T  31883332 caacttttcctctcatactcacatcatgtatttactttctctctctattgctttgatttttgtgtca 31883266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10335593 - 10335666
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||| |||||||||||||||| ||  || |||||||||| |||||| ||||| |||  |||||||||||||    
T  10335593 caactttatctctcatactcacattatttttttactttctctctctattactttggtttccgtgtcactatcta 10335666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28748155 - 28748218
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||||| || || ||||| | ||||||| |||||||||||||||||||||    
T  28748155 caactttctctctcatactcatatcat-attctcattttctctctctattgctttgatttttgtg 28748218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 30945865 - 30945929
Alignment:
Q  10 ctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatcta 74  Q
    ||||||||||||||| || ||| |||||| ||||||||||| ||||||||| ||| || ||||||    
T  30945865 ctctcatactcacattatgattttactttatctatctattgatttgattttcgtgccaatatcta 30945929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34047429 - 34047501
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||||||||||||||||||| ||| || ||  || ||| |||||||||||| |||||||| || |||||    
T  34047429 caactttctctctcatactcacattatctttttatcttatctctctattgctttggtttttgtgccaatatct 34047501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13143410 - 13143352
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| | | || |||||| ||| |||||||||||||||||    
T  13143410 caactttctctctcatactcacatta-ctttttactttatctctctattgctttgatttt 13143352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18141329 - 18141271
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| | | || |||||| ||| |||||||||||||||||    
T  18141329 caactttctctctcatactcacatta-ctttttactttatctctctattgctttgatttt 18141271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14817974 - 14818043
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||| |  || || |||||||||| | ||||| |||| |||||||| |||||    
T  14817974 caactttctctctcatactcactttttctttttactttctctctttattgttttggtttttgtgccacta 14818043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 3772441 - 3772473
Alignment:
Q  44 tctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||||| |||||||||||||||||||||||||    
T  3772441 tctattgatttgatttttgtgtcactatctaaa 3772473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13423011 - 13423059
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctatt 49  Q
    |||||||||||||||||||||||| ||  || |||||||||| ||||||    
T  13423011 caactttctctctcatactcacattatatttttactttctctctctatt 13423059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 9e-27; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 13089810 - 13089672
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| |||||       ||| |||||  |||| |    
T  13089810 caactttctctttcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttaattgttc 13089711  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattg 139  Q
    || | ||||||| || |||||||||| ||||||||||||    
T  13089710 aaaaggttgtcataagaaatggttgttcaaataacattg 13089672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 17097826 - 17097694
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    ||||| ||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||| ||||        ||| ||||| |||||||||||    
T  17097826 tttctatctcatactcacattgtcattctactttctctttctattactttgatttttgtgtcactacctaattttctttgtataatttagttgtccaaca 17097727  T
Q  105 agttgtcacaataaatggttgtacaaataacatt 138  Q
    | ||||||||| |||||| ||| |||||||||||    
T  17097726 aattgtcacaagaaatgg-tgttcaaataacatt 17097694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11954474 - 11954615
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||||||||||||||||||||  | ||| || ||||| | |||||| |||||||||||||| ||||||||||        ||| ||||| |||||      
T  11954474 caactttctctctcatactcacattgttattttattttctttctctattactttgatttttgtgccactatctaagtcactttgtataatttagttgtat 11954573  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || ||||||||| ||||||||||||| |||||||||||||||    
T  11954574 aagaagttgtcaaaataaatggttgttcaaataacattgctc 11954615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 611907 - 611982
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    |||||||||||||||||||||||| |||||| || ||||||| |||| |||||||||||||||||||||| |||||    
T  611907 caactttctctctcatactcacattatcattttattttctctctctactgctttgatttttgtgtcactacctaaa 611982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 16972128 - 16971986
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||| |||||||||||| | ||||  |  ||||||||||||| |||||| ||||||||||||||||| | ||||||       ||| |||||| ||||      
T  16972128 caaccttctctctcatatttacattgttcttctactttctctctctattactttgatttttgtgtcagtctctaaatccctttgtataatttgattgtat 16972029  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    || |||||||||||||||||| |||| ||||||||||||||||    
T  16972028 aagaagttgtcacaataaatgattgttcaaataacattgctca 16971986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19522032 - 19521963
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||| |||||||||||| ||| || |||||||||| |||||||||||||||||||||||||||    
T  19522032 caactttctctttcatactcacattatctttttactttctctctctattgctttgatttttgtgtcacta 19521963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33037562 - 33037631
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||| ||| |||||||||||||||||||||||||||    
T  33037562 caactttctctctcatactcacattatctttttactttttctctctattgctttgatttttgtgtcacta 33037631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36738990 - 36739059
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||| |||||||||||| ||||||||||||||    
T  36738990 caactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcacta 36739059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 21210861 - 21211001
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||| ||||| ||  ||||||||||||| ||||||||||| ||||||||   |||| |||||       ||| ||| ||||||| |    
T  21210861 caactttctctctcatacacacattattcttctactttctctctctattgctttaatttttgtactactacctaaatttctttgtataatgtggttgttc 21210960  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgct 141  Q
    || |||||||||||  ||| |||||| ||||||||||||||    
T  21210961 aataagttgtcacataaaaaggttgttcaaataacattgct 21211001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42446319 - 42446180
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||| |||||||||  || ||||||||| ||| ||||||||||||||||||||| || || |||||       |||  |||||||||||     
T  42446319 caactttctctctcttactcacattgtccttctactttttctctctattgctttgatttttgtgccattacctaaatttctttgtattatttggttgtct 42446220  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgc 140  Q
    || | |||||||||| |||  ||||| |||||||||||||    
T  42446219 aataggttgtcacaagaaaatgttgttcaaataacattgc 42446180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5168225 - 5168294
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| || |||||||||| ||||||||||||||||||||| |||||    
T  5168225 caactttatctctcatactcacattatctttttactttctctctctattgctttgatttttgtgccacta 5168294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 31748412 - 31748521
Alignment:
Q  34 actttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaata 133  Q
    |||||||||||||||||||||||||||||||  || | |||||       ||| |||||| |||||||| |||||||||||| ||||| |||| ||||||    
T  31748412 actttctctatctattgctttgatttttgtgctacaacctaaatttctttgtataatttgattgtccaataagttgtcacaaaaaatgattgttcaaata 31748511  T
Q  134 acattgctca 143  Q
    |||| |||||    
T  31748512 acatcgctca 31748521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40364611 - 40364674
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  ||||||||||||| |||||| ||||||||||||||    
T  40364611 caactttctctctcatactcacattatatttctactttctctctctattactttgatttttgtg 40364674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26791273 - 26791204
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||| ||||||| ||| || |||||||||| |||||||||||| |||||||| |||||    
T  26791273 caactttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtgccacta 26791204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14923113 - 14923184
Alignment:
Q  1 caactttctctctcatactcaca--tgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||||||||| |||||||| |||||    
T  14923113 caactttctctctcatactcacacatgatctttttactttctctctctattgctttggtttttgtgccacta 14923184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 32872894 - 32872785
Alignment:
Q  33 tactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaat 132  Q
    |||||||| | ||||||||||||| |||||||| |||| |||||        || | |||| ||||||||||||||||||||| ||| |||||| |||||    
T  32872894 tactttctttttctattgctttgacttttgtgttactacctaaatttctttttatattttgattgtccaacaagttgtcacaagaaagggttgttcaaat 32872795  T
Q  133 aacattgctc 142  Q
    ||||||||||    
T  32872794 aacattgctc 32872785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 35646426 - 35646494
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||||||||| ||  || |||||||||| | |||||||||| ||||||||||||||    
T  35646426 aactttctctctcatactcacattatttttttactttctctctatattgctttggtttttgtgtcacta 35646494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2972365 - 2972432
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||| |||||||||||||| ||| || | ||||||||| ||||||||||||||||||||||||    
T  2972365 caactttctttctcatactcacattatcgtttttactttctctctctattgctttgatttttgtgtca 2972432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 38493668 - 38493727
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgattttt 61  Q
    ||||||||||||||||||||||| || ||| |||||| ||| ||||||||||||||||||    
T  38493668 aactttctctctcatactcacattataattttactttatctctctattgctttgattttt 38493727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41321297 - 41321363
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||| |||||||||||||| ||| || |||||||||| |||||| ||||| |||||||||||    
T  41321297 caactttctttctcatactcacattatctttgtactttctctctctattactttggtttttgtgtca 41321363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7287218 - 7287149
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||| |||||||||||| ||  || |||||||||| ||||||| |||| ||||||||||||||    
T  7287218 caactttctctttcatactcacattatatttttactttctctctctattgttttggtttttgtgtcacta 7287149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 19981985 - 19981876
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtaca 129  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||       ||| |||||  ||||||||||| |||||| || |||  |||||  |    
T  19981985 ttctactttctctttctattactttgatttttgtgccactatctaaatttttttgtataatttaattgtccaacaaattgtcataagaaaatgttgttta 19981886  T
Q  130 aataacattg 139  Q
    ||||||||||    
T  19981885 aataacattg 19981876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 884484 - 884547
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||| |||||||||||||||| ||  || |||||||||| ||||||| |||||||||||||    
T  884484 caactttatctctcatactcacattatatttttactttctctttctattgttttgatttttgtg 884547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 18660805 - 18660864
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||| | ||| || |||||||||| |||||||||||| ||||||||    
T  18660805 tttctctctcatactcacgttatctttttactttctctctctattgctttggtttttgtg 18660864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22098298 - 22098361
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| ||  || |||||||||| |||||| ||||||| ||||||    
T  22098298 caactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtg 22098361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 33958287 - 33958216
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    |||||||| | |||||||||||| ||  || |||||||||| |||||||||||| ||||||||||| |||||    
T  33958287 aactttctatatcatactcacattatatttttactttctctctctattgctttggtttttgtgtcaatatct 33958216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39054629 - 39054692
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||| ||| |||||||| ||  || |||||||||| |||||||||||||||||||||    
T  39054629 caactttctctttcacactcacattatgtttttactttctctctctattgctttgatttttgtg 39054692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20770174 - 20770239
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||||||||||||| ||||||    
T  20770174 caactttctctctcatactcacattat-tttttactttatctctctattgctttgattttcgtgtca 20770239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 39195824 - 39195927
Alignment:
Q  38 tctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacat 137  Q
    ||||| |||||||||||||||||||| |||||| |||||       ||| ||| |||||||||||||| ||||||||  |||   |||| ||||||||||    
T  39195824 tctctctctattgctttgatttttgtatcactacctaaatttctttgtataatgtggttgtccaacaaattgtcacataaaaaaattgttcaaataacat 39195923  T
Q  138 tgct 141  Q
    ||||    
T  39195924 tgct 39195927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1764266 - 1764335
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||||||||||  || || |||||||||| | |||||||||| ||||| || |||||    
T  1764266 caactttctctctcatactcacattttctttttactttctctctttattgctttggtttttatgccacta 1764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 22649686 - 22649621
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||| ||| || ||||||||||   |||||||||  ||||||||||||||    
T  22649686 tttctctctcatactcacattatctttttactttctctccatattgctttagtttttgtgtcacta 22649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28306161 - 28306092
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||| |||||||||||||||| ||| |  |||||||||| |||||||||||| | |||||| |||||    
T  28306161 caactttatctctcatactcacattatcttcttactttctctctctattgctttggtctttgtgccacta 28306092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 35567544 - 35567609
Alignment:
Q  2 aactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||| | |||| ||  || |||||||||| ||||||||||||| ||||||||||    
T  35567544 aactttctctctcatatttacattatatttttactttctctctctattgctttgaattttgtgtca 35567609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 36562992 - 36562939
Alignment:
Q  90 tttggttgtccaacaagttgtcacaataaatggttgtacaaataacattgctca 143  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||| ||||    
T  36562992 tttggttgtccaacaagttgtcccaacaaagggttgttcaaataacattcctca 36562939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39195760 - 39195821
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttg 62  Q
    ||||||||||||||||||  ||||  |  ||||||||||||| |||||||||||||||||||    
T  39195760 caactttctctctcatacagacattgttcttctactttctctctctattgctttgatttttg 39195821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42174963 - 42175032
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||||||||| | |||| ||| || |||||| ||| |||||| ||||||| ||||||||||||    
T  42174963 caactttctctctcatatttacattatctttttactttttctctctattcctttgatctttgtgtcacta 42175032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1274400 - 1274472
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||| ||| |||||||||||| | | || ||||| |||| |||||||||||| ||||||||||| |||||    
T  1274400 caactttatctttcatactcacattacctttttacttcctctctctattgctttggtttttgtgtcaatatct 1274472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8920121 - 8920184
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || ||||| | ||||||| |||||||||||| ||||||||    
T  8920121 caactttctctctcatactcacatcat-attctcattttctctctctattgctttggtttttgtg 8920184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21922173 - 21922110
Alignment:
Q  1 caactttctctctcatactcacatgatcattc-tactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || |||| || ||||||| |||||||||||| ||||||||    
T  21922173 caactttctctctcatactcacatcat-attcttattttctctctctattgctttggtttttgtg 21922110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41173295 - 41173358
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||||||||||| || ||||| | ||||||| |||||||||||| ||||||||    
T  41173295 caactttctctctcatactcacatcat-attctcattttctctctctattgctttggtttttgtg 41173358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3640225 - 3640167
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  3640225 caactttctctctcatactcacattat-tttttactttatctttctattgctttgatttt 3640167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 4719701 - 4719756
Alignment:
Q  9 tctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||||||||||| ||  || |||||| ||| |||||||||||||||||||||    
T  4719701 tctctcatactcacattatgtttttactttttctctctattgctttgatttttgtg 4719756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6940178 - 6940120
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  6940178 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 6940120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 7076593 - 7076534
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||| || ||  || |||||||||| |||||||||||| ||||||||    
T  7076593 tttctctctcatactcatattatttttttactttctctctctattgctttggtttttgtg 7076534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16690542 - 16690605
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||| |||||||||||| ||  || |||||||| | |||||||||||| ||||||||    
T  16690542 caactttctctttcatactcacattatatttttactttctttctctattgctttggtttttgtg 16690605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18695361 - 18695419
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||  || |||||| ||| |||||||||||||||||    
T  18695361 caactttctctctcatactcacat-atgtttttactttatctctctattgctttgatttt 18695419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 1671588 - 1671650
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||| ||||||||| || ||| || |||||||||| ||||||| |||| |||||||||||    
T  1671588 tttctctgtcatactcatattatctttttactttctctttctattgttttggtttttgtgtca 1671650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14532547 - 14532613
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||||||||  |  || |||||||| | |||||||||||| || ||||||||    
T  14532547 caactttctctctcatactcacattttgtttttactttctttctctattgctttggttcttgtgtca 14532613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 32478495 - 32478449
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||| ||||||| |||||||||||||||||| |||||||| |||||    
T  32478495 ttctattttctctctctattgctttgatttttatgtcactacctaaa 32478449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 29463044 - 29463101
Alignment:
Q  7 tctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    ||||||||||||||||||  |  || || ||||||| |||||||||||||||||||||    
T  29463044 tctctctcatactcacattttgtttttattttctctctctattgctttgatttttgtg 29463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5721846 - 5721786
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgattttt 61  Q
    ||||||| ||||||||||| |||| ||| || ||||||||||  ||||||||||| |||||    
T  5721846 caactttatctctcatactgacattatctttttactttctctccctattgctttggttttt 5721786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11148554 - 11148611
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttt 60  Q
    |||| ||||||||||||||||||| ||  || |||||||||  |||||||||||||||||    
T  11148554 caacattctctctcatactcacattatgtttttactttctc--tctattgctttgatttt 11148611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 21156033 - 21156093
Alignment:
Q  4 ctttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtg 64  Q
    |||||||| |||||||||||| ||  ||  ||||||||| |||||||||||| ||||||||    
T  21156033 ctttctctttcatactcacattatattttcactttctctttctattgctttggtttttgtg 21156093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 21943720 - 21943652
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||||||||| |||||| ||  || || ||||||| | |||||||||||||||| ||||| |||||    
T  21943720 tttctctctcatattcacattatgtttttattttctctctttattgctttgatttttctgtcaatatct 21943652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28467482 - 28467414
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcact 69  Q
    ||||||||| | | |||||||||| ||| || |||||||||  ||||||| |||| |||||||||||||    
T  28467482 caactttcttttttatactcacattatctttttactttctcactctattgttttggtttttgtgtcact 28467414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35075604 - 35075531
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    ||||||| |||||||||||||||| ||  || || |||||||  |||||||||||||||||||  || ||||||||    
T  35075604 caactttttctctcatactcacattatatttttattttctct--ctattgctttgatttttgtaccaatatctaaa 35075531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35650016 - 35649945
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatct 73  Q
    ||||||| |||||||||||||||| ||  || |||||||||| |||||||| || | |||||||||| |||||    
T  35650016 caactttttctctcatactcacattatgtttttactttctctctctattgcatt-aattttgtgtcaatatct 35649945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 38363491 - 38363535
Alignment:
Q  90 tttggttgtccaacaagttgtcacaataaatggttgtacaaataa 134  Q
    ||||||||||| |||||||||||||  |||||||||| |||||||    
T  38363491 tttggttgtcccacaagttgtcacataaaatggttgttcaaataa 38363535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41175734 - 41175679
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgat 57  Q
    |||||||||||||||||||||||| ||  || |||||| ||| ||||||||||||||    
T  41175734 caactttctctctcatactcacattat-tttttactttatctctctattgctttgat 41175679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 8977 - 8840
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||||||| |||||  |  ||||||||||||| ||||||||||||||||||||||||||| |||||       ||| ||| ||||||||||| |    
T  8977 tttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaaaa 8878  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
    ||||||||||  ||| |||||| |||||||||||||||    
T  8877 agttgtcacatgaaaaggttgttcaaataacattgctc 8840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 1691 - 1828
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaaca 104  Q
    |||||||||||||||| ||| |||||| |||||||||| | ||||||||||||||||||| |||||||||||       ||| ||||| ||||||||| |    
T  1691 tttctctctcatactctcattatcattttactttctctctttattgctttgatttttgtgccactatctaaatttctttgtataatttagttgtccaaaa 1790  T
Q  105 agttgtcacaataaatggttgtacaaataacattgctc 142  Q
     |||||| ||| |||||||||| || ||||||||||||    
T  1791 ggttgtcgcaagaaatggttgttcacataacattgctc 1828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6548 - 6407
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    ||||||| ||||||||||||||||  |  ||||||||||||| |||||| ||||||||||||||||||||||||||       ||| | |||||||||      
T  6548 caactttatctctcatactcacattgttcttctactttctctctctattactttgatttttgtgtcactatctaaatccctttgtatagtttggttgtat 6449  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || ||||||| |||||||| |||||| |||||| ||||||||    
T  6448 aagaagttgtaacaataaaaggttgttcaaatagcattgctc 6407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 10979 - 11118
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtcc 100  Q
    |||||||||||||||||||||||| |||||| |||  ||||| ||||||||||||||||||||| ||||| |||||       ||| ||||| ||||||     
T  10979 caactttctctctcatactcacattatcattttac--tctctctctattgctttgatttttgtgccactaactaaatttctttgtataatttagttgtcg 11076  T
Q  101 aacaagttgtcacaataaatggttgtacaaataacattgctc 142  Q
    || | ||| ||| || ||| |||||| |||||||||||||||    
T  11077 aaaaggttttcaaaagaaagggttgttcaaataacattgctc 11118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 101934 - 101790
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatct------attgctttgatttttgtgtcactatctaaannnnnnngtaaaatttgg 94  Q
    ||||||||||||||||||||||||  || ||||| ||||||| |||      ||||||||||||||| |||||||| |||||       ||| |||||||    
T  101934 caactttctctctcatactcacattgtccttctattttctctctctctctctattgctttgatttttatgtcactacctaaatttctttgtataatttgg 101835  T
Q  95 ttgtccaacaagttgtcacaataaatggttgtacaaataacattgc 140  Q
    ||||| ||||||||||||||| ||| |||||| |||||||||||||    
T  101834 ttgtc-aacaagttgtcacaagaaagggttgtgcaaataacattgc 101790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49337 - 49406
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||||||||| ||| || |||||||||  ||||||  |||| ||||||||||||||    
T  49337 caactttctctctcatactcacattatctttttactttctcactctattattttggtttttgtgtcacta 49406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 76648 - 76579
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||||||||||||||| ||||| ||| ||  ||||||||| |||||||||||| |||||||| |||||    
T  76648 caactttctctctcatacccacattatcttttcactttctctctctattgctttggtttttgtgccacta 76579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 13556 - 13444
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtaca 129  Q
    ||||||||||||| |||||| ||| ||||||||| |||||  |||||       ||| ||||| ||||||||| |||||||||||| |||  |||||  |    
T  13556 ttctactttctctttctattacttcgatttttgtatcactgcctaaatttctttgtataatttagttgtccaataagttgtcacaaaaaagagttgttta 13457  T
Q  130 aataacattgctc 142  Q
    |||||||||||||    
T  13456 aataacattgctc 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16816 - 16755
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| ||| || |||||||||| | |||||||||  |||||||    
T  16816 caactttctctctcatactcacattatctttatactttctctct-tattgctttagtttttgt 16755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28355 - 28280
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcactatctaaa 76  Q
    |||||||||||||||||| |||||  |  ||||||||||||| |||||| ||||||||||| || |||||| ||||    
T  28355 caactttctctctcatacacacattgttcttctactttctctctctattactttgatttttatgccactatataaa 28280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 59288 - 59400
Alignment:
Q  30 ttctactttctctatctattgctttgatttttgtgtcactatctaaannnnnnngtaaaatttggttgtccaacaagttgtcacaataaatggttgtaca 129  Q
    ||||||||||||| |||||| ||| ||||||||| |||||  |||||       ||| ||||| ||||||||| |||||||||||| |||  |||||  |    
T  59288 ttctactttctctttctattacttcgatttttgtatcactgcctaaatttctttgtataatttagttgtccaataagttgtcacaaaaaagagttgttta 59387  T
Q  130 aataacattgctc 142  Q
    |||||||||||||    
T  59388 aataacattgctc 59400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 56028 - 56089
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| ||| || |||||||||| | |||||||||  |||||||    
T  56028 caactttctctctcatactcacattatctttatactttctctct-tattgctttagtttttgt 56089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8710 - 8779
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    ||||||||||| ||||||||| || ||| || ||| |||||| ||| |||||||| ||||||||||||||    
T  8710 caactttctctttcatactcatattatctttttacgttctctctctgttgctttggtttttgtgtcacta 8779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 10988 - 10923
Alignment:
Q  5 tttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtcacta 70  Q
    |||||| ||||||||||||| ||| || |||||||||| ||||||  |||||||||||||| ||||    
T  10988 tttctccctcatactcacattatctttttactttctctctctattattttgatttttgtgttacta 10923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11823 - 11890
Alignment:
Q  1 caactttctctctcatactcacatgat-cattctactttctctatctattgctttgatttttgtgtca 67  Q
    ||||||||||||||||||| |||| || | || || ||||||| |||||||||||| |||||||||||    
T  11823 caactttctctctcatacttacattattctttttattttctctctctattgctttggtttttgtgtca 11890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44817 - 44879
Alignment:
Q  1 caactttctctctcatactcacatgatcattct-actttctctatctattgctttgatttttgt 63  Q
    ||||||||||||||||||| |||| || ||||| | ||||||| ||||||||||||||||||||    
T  44817 caactttctctctcatacttacatcat-attctcattttctctctctattgctttgatttttgt 44879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34822 - 34756
Alignment:
Q  1 caactttctctctcatactcacatgatcattctactttctctatctattgctttgatttttgtgtca 67  Q
    |||||||||||||||||||||||| ||  || |||||||| | | |||||||||| |||| ||||||    
T  34822 caactttctctctcatactcacattatgtttttactttctttttttattgctttggttttcgtgtca 34756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 35569 - 35634
Alignment:
Q  7 tctctctcatactcacatgatcattctactttctctatct--attgctttgatttttgtgtcacta 70  Q
    ||||||||||||||| || ||| || |||||||||| |||  ||||||||| ||||||||||||||    
T  35569 tctctctcatactcatattatctttttactttctctctctctattgctttggtttttgtgtcacta 35634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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