View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14861_low_27 (Length: 256)

Name: NF14861_low_27
Description: NF14861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14861_low_27
NF14861_low_27
[»] chr8 (1 HSPs)
chr8 (12-238)||(11487607-11487833)
[»] chr3 (19 HSPs)
chr3 (12-238)||(10129500-10129726)
chr3 (39-238)||(10531239-10531438)
chr3 (107-238)||(9841436-9841567)
chr3 (108-238)||(10034581-10034711)
chr3 (60-238)||(10263279-10263457)
chr3 (60-238)||(10666044-10666222)
chr3 (101-217)||(10520084-10520200)
chr3 (39-238)||(10680038-10680236)
chr3 (101-238)||(13852815-13852952)
chr3 (12-217)||(10373107-10373312)
chr3 (12-217)||(10583112-10583317)
chr3 (39-217)||(9852338-9852516)
chr3 (108-217)||(10431402-10431511)
chr3 (108-238)||(10361162-10361292)
chr3 (39-158)||(10503240-10503359)
chr3 (60-152)||(11771898-11771990)
chr3 (60-152)||(11779295-11779387)
chr3 (179-238)||(11021930-11021989)
chr3 (101-157)||(9980125-9980181)
[»] chr2 (1 HSPs)
chr2 (39-238)||(26909466-26909665)
[»] chr4 (1 HSPs)
chr4 (106-235)||(17850285-17850414)
[»] scaffold0083 (1 HSPs)
scaffold0083 (101-157)||(54956-55012)


Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 11487833 - 11487607
Alignment:
Q  12 atcatcacccattccaatagtcaaccgtgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaatt 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11487833 atcatcacccactccaatagtcaaccgtgaaagagcggtcagatctttgagaccccattccgtaacaggcggcgttgatctttccgacaaaatctcaatt 11487734  T
Q  112 gattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11487733 gattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatccgaagtt 11487634  T
Q  212 tgacttgaagtgatccaattgagtcat 238  Q
    |||||||||||||||||||||||||||    
T  11487633 tgacttgaagtgatccaattgagtcat 11487607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 10129726 - 10129500
Alignment:
Q  12 atcatcacccattccaatagtcaaccgtgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaatt 111  Q
    |||||||||| |||||||| |||| | |||||||||||||| |||||  |||||||||||||| |||||||| | || |||||  |||   |||||||||    
T  10129726 atcatcaccctttccaatactcaatcttgaaagagcggtcaaatcttgaagaccccattctgtcacaggcggtgctgttcttttggactgtatctcaatt 10129627  T
Q  112 gattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtt 211  Q
    |||| |||||||||||||||| ||||  ||||||||||||||||||||| ||| || |||  |||   ||||||||| ||||||||||| ||| |||| |    
T  10129626 gattgtaatttgggaggtagacaaactccttcacaaaatgacaactctgcacattttagattcaacctttcaagagctgtgagcatgtcaatcttaagct 10129527  T
Q  212 tgacttgaagtgatccaattgagtcat 238  Q
    |||||| || | || ||||||| ||||    
T  10129526 tgacttcaaataattcaattgaatcat 10129500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 10531438 - 10531239
Alignment:
Q  39 tgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaaca 138  Q
    |||||||||||||||  ||| ||||||||||||||| ||||||||||||| |||||   |  | ||| ||||||||| |||||||||||||||| |||      
T  10531438 tgaaagagcggtcaggccttggagaccccattctgttacaggcggcgttgctctttggaaagatatcacaattgattgtaatttgggaggtagacaaatt 10531339  T
Q  139 tcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtttgacttgaagtgatccaattgagtcat 238  Q
     ||||||||||| ||||||| |||||||  |||| |||   |||||||||||||||| ||||||||| ||| ||||||| |||  |||||||||| ||||    
T  10531338 ccttcacaaaataacaactcgggacaatctagagtcaattgttcaagagcagtgagcgtgtccatccgaagcttgactttaagcaatccaattgaatcat 10531239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 238
Target Start/End: Complemental strand, 9841567 - 9841436
Alignment:
Q  107 caattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcct 206  Q
    ||||||||| |||||||||||||||| ||||  ||||||||||||||||||||| ||| || |||  ||| | ||||||||| ||||||||||||||| |    
T  9841567 caattgattgtaatttgggaggtagacaaactccttcacaaaatgacaactctgcacattttagattcaacatttcaagagctgtgagcatgtccatctt 9841468  T
Q  207 aagtttgacttgaagtgatccaattgagtcat 238  Q
    ||| ||||||| || | || ||||||| ||||    
T  9841467 aagcttgacttcaaataattcaattgaatcat 9841436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 10034711 - 10034581
Alignment:
Q  108 aattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatccta 207  Q
    |||||||| |||||||||||||||| ||||  ||||||||||||||||||||| ||| || |||  |||   ||||||||| ||||||||||||||| ||    
T  10034711 aattgattgtaatttgggaggtagacaaactccttcacaaaatgacaactctgcacattttagattcaacctttcaagagctgtgagcatgtccatctta 10034612  T
Q  208 agtttgacttgaagtgatccaattgagtcat 238  Q
    || ||||||| || | || ||||||| ||||    
T  10034611 agcttgacttcaaataattcaattgaatcat 10034581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 238
Target Start/End: Complemental strand, 10263457 - 10263279
Alignment:
Q  60 gagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactct 159  Q
    |||||||||||| ||||| ||||| |||| | |||  |   ||||||||||||||| |||||||||||||||| ||||  ||||| ||||||||||||||    
T  10263457 gagaccccattccgtaaccggcggtgttgttttttgggtagaaatctcaattgattgtaatttgggaggtagacaaactccttcagaaaatgacaactct 10263358  T
Q  160 ggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtttgacttgaagtgatccaattgagtcat 238  Q
    | |||  | ||| ||||   ||||||||| |||||||| |||||| |||| ||||||| || | || ||||||| ||||    
T  10263357 gcacatgttagaaacaacctttcaagagcggtgagcatttccatcttaagcttgacttcaaataattcaattgaatcat 10263279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 238
Target Start/End: Complemental strand, 10666222 - 10666044
Alignment:
Q  60 gagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactct 159  Q
    |||||||||||| ||||| ||||| |||  |||||  ||  ||||| |||||| || |||||||||||||||| ||||  |||||||||||||||||| |    
T  10666222 gagaccccattccgtaaccggcggagttattctttgagatgaaatcacaattgtttgtaatttgggaggtagacaaactccttcacaaaatgacaactgt 10666123  T
Q  160 ggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtttgacttgaagtgatccaattgagtcat 238  Q
    | |||  | |||  |||   ||||||||||||||||||||||||| |||| ||||||| || | || ||||||| ||||    
T  10666122 gcacatcttagaatcaacttttcaagagcagtgagcatgtccatcttaagcttgacttcaaataattcaattgaatcat 10666044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 10520200 - 10520084
Alignment:
Q  101 aaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtc 200  Q
    |||||| ||||||||  ||||||||||||||| ||||  ||||||||||||||||||||  |||||  |||| |||   ||||||||| |||||||||||    
T  10520200 aaatcttaattgattgcaatttgggaggtagacaaactccttcacaaaatgacaactctacacaatctagagtcaacctttcaagagctgtgagcatgtc 10520101  T
Q  201 catcctaagtttgactt 217  Q
    |||| |||| |||||||    
T  10520100 catcttaagcttgactt 10520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 10680236 - 10680038
Alignment:
Q  39 tgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaa-atctcaattgattctaatttgggaggtagagaaac 137  Q
    |||||||||||||||  ||| |||| |||||||  | ||||||||||||| |||| | || | | ||| ||||||||| |||||||||||||||| ||||    
T  10680236 tgaaagagcggtcaggccttggagatcccattccattacaggcggcgttgctctt-cggaaagagatcacaattgattgtaatttgggaggtagacaaac 10680138  T
Q  138 atcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtttgacttgaagtgatccaattgagtca 237  Q
      ||||||||| | |||||||||||||||  |||| | |   |||||||||||||||| ||||||||| ||| ||||||| |||   ||||||||| |||    
T  10680137 tccttcacaaa-taacaactctggacaatctagagtctattgttcaagagcagtgagcgtgtccatccgaagcttgactttaagcagtccaattgaatca 10680039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 13852815 - 13852952
Alignment:
Q  101 aaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaac-ttcaagagcagtgagcatgt 199  Q
    ||||| ||||||||| |||||| ||||||||| ||||  |||||||||||||||||||| ||| ||||  || | || | ||||||||| || ||| |||    
T  13852815 aaatcacaattgattgtaatttaggaggtagacaaactccttcacaaaatgacaactctcgac-attccaagtccaaccgttcaagagcggtaagcgtgt 13852913  T
Q  200 ccatcctaagtttgacttgaagtgatccaattgagtcat 238  Q
    |||||| ||| || |||| ||||||||||||||||||||    
T  13852914 ccatccgaagcttcactttaagtgatccaattgagtcat 13852952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 10373107 - 10373312
Alignment:
Q  12 atcatcacccattccaatagtcaaccgtgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaatt 111  Q
    ||||||| || ||| |||| |||| | ||| ||||| || ||||||| |||||||||||| ||||| ||||| |||  ||||   ||  |||||  ||||    
T  10373107 atcatcatcctttctaatactcaagcttgacagagctgttagatcttggagaccccattccgtaaccggcggtgttattcttcgagatgaaatccaaatt 10373206  T
Q  112 gattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtt 211  Q
    |||| ||||||| |||||||| ||||  |||||||||||||||||||| ||||   || |  |||   ||||||||| ||||||||||||||| |||| |    
T  10373207 gattgtaatttgagaggtagacaaactccttcacaaaatgacaactctcgacatcccaaactcaacctttcaagagcggtgagcatgtccatcttaagct 10373306  T
Q  212 tgactt 217  Q
    ||||||    
T  10373307 tgactt 10373312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 10583317 - 10583112
Alignment:
Q  12 atcatcacccattccaatagtcaaccgtgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaatt 111  Q
    ||||||| || |||||||| || | | ||||||||| || |||||||||||||||||||| ||||| ||||| | || | |||  |  |||||| |||||    
T  10583317 atcatcatcctttccaatactccagcttgaaagagctgttagatctttgagaccccattccgtaaccggcggtgctgttttttgggtaaaaatcacaatt 10583218  T
Q  112 gattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtt 211  Q
    |||  ||||||| |||||||| ||||  ||||| |||||||||||| | | || |||| |  ||||  ||||||||| |||||||| |||||| |||  |    
T  10583217 gatcgtaatttgagaggtagacaaactccttcagaaaatgacaacttttggcatttcatatgcaaattttcaagagcggtgagcatttccatcttaaact 10583118  T
Q  212 tgactt 217  Q
    ||||||    
T  10583117 tgactt 10583112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 9852516 - 9852338
Alignment:
Q  39 tgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaaca 138  Q
    ||||||||| |||| || || |||||||||||| ||||| ||||| | || | |||  |   ||||| |||||| |  |||||||||||||||| ||||     
T  9852516 tgaaagagctgtcaaatattggagaccccattccgtaaccggcggtgctgtttttttggtagaaatcacaattgttcttaatttgggaggtagacaaact 9852417  T
Q  139 tcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtttgactt 217  Q
     ||||| |||||||||||| | | || |||| |  |||| |||||||||| ||||||||||||||| |||| |||||||    
T  9852416 ccttcagaaaatgacaacttttggcatttcatatgcaaatcttcaagagcggtgagcatgtccatcttaagcttgactt 9852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 10431402 - 10431511
Alignment:
Q  108 aattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatccta 207  Q
    |||||||| |||||||||||||||| ||||  ||||||||||||||| || | |||| |||| |  |||   ||||||||| ||||||||||||||| ||    
T  10431402 aattgattgtaatttgggaggtagacaaactccttcacaaaatgacagcttttgacatttcatatgcaacttttcaagagcggtgagcatgtccatctta 10431501  T
Q  208 agtttgactt 217  Q
    || |||||||    
T  10431502 agcttgactt 10431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 10361162 - 10361292
Alignment:
Q  108 aattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatccta 207  Q
    |||||||| |||||||||||||||| ||||  |||||||||| ||||||||||| ||||  |||| |||   ||||||||| |  ||| |||||||| ||    
T  10361162 aattgattgtaatttgggaggtagacaaactccttcacaaaacgacaactctggccaatctagagtcaaccgttcaagagcggcaagcgtgtccatctta 10361261  T
Q  208 agtttgacttgaagtgatccaattgagtcat 238  Q
    || ||||||| || | || ||||||| ||||    
T  10361262 agcttgacttcaaataattcaattgaatcat 10361292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 10503359 - 10503240
Alignment:
Q  39 tgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaaca 138  Q
    ||||||||||||||||||||  ||||||||||   | | ||| |  |||| |||||  ||| |||| |||||||||| |||||||||||| ||| ||||     
T  10503359 tgaaagagcggtcagatcttcaagaccccatttcattataggagttgttgttctttgggaccaaatatcaattgattgtaatttgggaggaagacaaact 10503260  T
Q  139 tcttcacaaaatgacaactc 158  Q
     ||||||||||||| |||||    
T  10503259 ccttcacaaaatgataactc 10503240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 11771990 - 11771898
Alignment:
Q  60 gagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatga 152  Q
    |||||||||||||||||| || || |||| | |||  || ||| || ||||||||| ||| |||||||||||| ||||  |||||||||||||    
T  11771990 gagaccccattctgtaactggtggtgttgttatttgggaaaaactcacaattgattgtaagttgggaggtagacaaactccttcacaaaatga 11771898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 11779295 - 11779387
Alignment:
Q  60 gagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatga 152  Q
    |||||||||||||||||| || || |||| | |||  || ||| || ||||||||| |||||||||||||||| ||||   ||||||||||||    
T  11779295 gagaccccattctgtaactggtggtgttgttatttgggaaaaactcacaattgattgtaatttgggaggtagacaaactctttcacaaaatga 11779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 11021989 - 11021930
Alignment:
Q  179 cttcaagagcagtgagcatgtccatcctaagtttgacttgaagtgatccaattgagtcat 238  Q
    ||||||||||||||||  ||||||||| ||  ||||||| ||||||| ||||||||||||    
T  11021989 cttcaagagcagtgagtgtgtccatccgaacattgactttaagtgattcaattgagtcat 11021930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 9980181 - 9980125
Alignment:
Q  101 aaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatgacaact 157  Q
    ||||| ||||||||| ||||||| |||||||| ||||  ||||| ||||||||||||    
T  9980181 aaatcacaattgattgtaatttgagaggtagacaaactccttcagaaaatgacaact 9980125  T

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Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 26909665 - 26909466
Alignment:
Q  39 tgaaagagcggtcagatctttgagaccccattctgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaaca 138  Q
    |||||||| ||| ||||||| ||||| |||||| ||||||| ||| |||| | |||  ||| |||  |||||||||| ||| |||||||||||| |||||    
T  26909665 tgaaagagtggttagatcttggagacaccattccgtaacagacggtgttgttatttgagaccaaaggtcaattgattgtaagttgggaggtagacaaaca 26909566  T
Q  139 tcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcctaagtttgacttgaagtgatccaattgagtcat 238  Q
     |||||||||||||||||||| |||| | |||| ||||   ||||||| | |||||| ||||||||| ||| || |||| || | || ||||||| ||||    
T  26909565 ccttcacaaaatgacaactctcgacagtccagatacaactgttcaagatctgtgagcgtgtccatccgaagcttcactttaaataattcaattgaatcat 26909466  T

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Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 17850285 - 17850414
Alignment:
Q  106 tcaattgattctaatttgggaggtagagaaacatcttcacaaaatgacaactctggacaattcagagacaaaacttcaagagcagtgagcatgtccatcc 205  Q
    |||||||||| ||| ||||||||||| |||||  || ||||||||||||||||| ||||    |||||||   ||||||||||||||||  ||||||| |    
T  17850285 tcaattgattgtaacttgggaggtagggaaactcctccacaaaatgacaactctcgacatcctagagacagttcttcaagagcagtgagtgtgtccattc 17850384  T
Q  206 taagtttgacttgaagtgatccaattgagt 235  Q
     ||| ||||||| ||| |||||||||||||    
T  17850385 gaagcttgactttaagagatccaattgagt 17850414  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 54956 - 55012
Alignment:
Q  101 aaatctcaattgattctaatttgggaggtagagaaacatcttcacaaaatgacaact 157  Q
    ||||| ||||||||| ||||||| |||||||| ||||  ||||| ||||||||||||    
T  54956 aaatcacaattgattgtaatttgagaggtagacaaactccttcagaaaatgacaact 55012  T

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