View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14861_low_30 (Length: 214)
Name: NF14861_low_30
Description: NF14861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14861_low_30 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 38423060 - 38422860
Alignment:
| Q |
14 |
ataggtgatatgaataattttattcacgttaacaatagtttaataataaaaattgtccaagtaattgtaagctattttttattatagattaccaatagaa |
113 |
Q |
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| T |
38423060 |
ataggtgatatgaataattttattcacgttaacaatagtttaataataaaaattgtccaagtaattgtaagctatttttttttatagattaccaatagaa |
38422961 |
T |
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| Q |
114 |
attatatgtgtgtttaaactcctcaagaacattgtgaatctcatctaaagtgatgcggtagaaattttttatttgagagtaactctactgttgtttttgt |
213 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
38422960 |
attatatgtgtgtttaaactcctcaaaaacattgtgaatctcatctaaagtgatgcggtagaaattttttatttgagagtaactctcttgttgtttttgt |
38422861 |
T |
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| Q |
214 |
c |
214 |
Q |
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| T |
38422860 |
c |
38422860 |
T |
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