View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14862_low_1 (Length: 715)
Name: NF14862_low_1
Description: NF14862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14862_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 479; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 214 - 704
Target Start/End: Complemental strand, 21359747 - 21359257
Alignment:
| Q |
214 |
gtagtgagttgcttgcttgggtatgagtatgactactgctcttgtaaattcagaaattgattattcaatttgctggctttgtggagtggaggaagagtaa |
313 |
Q |
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| T |
21359747 |
gtagtgggttgcttgcttgggtatgagtatgactactgctcttgcaaattcagaaattgattattcaatttgctggctttgtggagtggaggaagagtaa |
21359648 |
T |
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| Q |
314 |
ttgaacaaaattgtacaaggaaatggtgagagaagtgttgaaattatattctcttaagcttaatagctgaagtgaaaatgaaaataggagaaattggaag |
413 |
Q |
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| T |
21359647 |
ttgaacaaaattgtacaaggaaatggtgagagaagtgttgaaattatattctcttaagcttaatagctgaagtgaaaatgaaaataggagaaattggaag |
21359548 |
T |
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| Q |
414 |
taaacaaacagcccttaatgttgtgtctgaagagttcgagtaagaaggttttgccgtgtagtgtgtattcgcagggtgggcagcaggaaagatgacgaca |
513 |
Q |
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| T |
21359547 |
taaacaaacagcccttaatgttgtgtctgaagagttcgagtaagaaggttttgccgtgtagtgtgtattcgcagggtgggcagcaggaaagatgacgaca |
21359448 |
T |
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| Q |
514 |
ctttgcagcagatggcgttgatgtttctctcgaaaacaatgatatcccaaatctgctgcagaagtgtgggaagctatcccaaactatggcttcgcatgag |
613 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21359447 |
ctttgcagcagatggcgttgatgtttctctcgaaaacaatgatatcccaaatctgctgcagaagtgtgggaagctatcccaaactatggcttcgcatgag |
21359348 |
T |
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| Q |
614 |
atggtgaaggggcttaattggagtggtaaattgttttggcggatggttttggagagtttctaagcttaagtcatcacctggatctgtgctg |
704 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
21359347 |
atggtgaaggggcttaattggagtggtaaattgttttggcggatggttttggagggtttctaagcttaagtcatcacctggatctgtgctg |
21359257 |
T |
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