View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14862_low_2 (Length: 495)

Name: NF14862_low_2
Description: NF14862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14862_low_2
NF14862_low_2
[»] chr8 (56 HSPs)
chr8 (16-474)||(31128222-31128680)
chr8 (16-162)||(18806546-18806692)
chr8 (16-155)||(2603057-2603196)
chr8 (16-162)||(31226447-31226593)
chr8 (16-162)||(5535771-5535917)
chr8 (16-152)||(35973373-35973510)
chr8 (16-162)||(14426098-14426244)
chr8 (18-157)||(6519026-6519164)
chr8 (36-162)||(1155114-1155240)
chr8 (16-162)||(11777645-11777791)
chr8 (25-121)||(5978535-5978631)
chr8 (16-162)||(3628229-3628374)
chr8 (16-142)||(16531567-16531693)
chr8 (16-113)||(9134151-9134248)
chr8 (16-162)||(23982244-23982395)
chr8 (16-178)||(35468333-35468494)
chr8 (16-150)||(28540671-28540806)
chr8 (16-162)||(5139654-5139799)
chr8 (16-162)||(13629014-13629161)
chr8 (16-162)||(13729426-13729573)
chr8 (16-167)||(37673729-37673885)
chr8 (20-150)||(9604491-9604622)
chr8 (16-162)||(23036794-23036941)
chr8 (33-157)||(7288239-7288364)
chr8 (16-162)||(38937792-38937939)
chr8 (16-113)||(9133803-9133899)
chr8 (16-96)||(6427146-6427226)
chr8 (16-60)||(28567807-28567851)
chr8 (16-60)||(28575400-28575444)
chr8 (100-163)||(29811510-29811573)
chr8 (16-141)||(8673597-8673723)
chr8 (16-161)||(28557246-28557392)
chr8 (16-150)||(4797222-4797358)
chr8 (26-150)||(23812560-23812686)
chr8 (106-178)||(9135092-9135163)
chr8 (16-96)||(12734043-12734122)
chr8 (16-56)||(28562309-28562349)
chr8 (105-161)||(43976703-43976759)
chr8 (16-67)||(10954145-10954196)
chr8 (16-67)||(10962150-10962201)
chr8 (115-150)||(13079882-13079917)
chr8 (119-162)||(36317074-36317117)
chr8 (16-66)||(5569228-5569278)
chr8 (120-174)||(29416713-29416767)
chr8 (31-152)||(30714036-30714158)
chr8 (31-152)||(30721813-30721935)
chr8 (109-163)||(36815817-36815871)
chr8 (120-154)||(44104241-44104275)
chr8 (16-65)||(1737803-1737852)
chr8 (133-162)||(12795888-12795917)
chr8 (133-162)||(22800520-22800549)
chr8 (133-178)||(38230314-38230359)
chr8 (134-162)||(7177008-7177036)
chr8 (133-161)||(14523119-14523147)
chr8 (110-162)||(35893475-35893527)
chr8 (16-60)||(36316762-36316805)
[»] chr4 (48 HSPs)
chr4 (16-163)||(35331960-35332107)
chr4 (16-164)||(39629169-39629317)
chr4 (16-163)||(23359102-23359249)
chr4 (16-178)||(39055162-39055324)
chr4 (16-162)||(35382341-35382487)
chr4 (16-150)||(52199803-52199937)
chr4 (16-162)||(822357-822503)
chr4 (16-162)||(2396298-2396445)
chr4 (16-150)||(10180603-10180737)
chr4 (16-178)||(35144388-35144550)
chr4 (20-162)||(12447422-12447565)
chr4 (16-178)||(35308946-35309109)
chr4 (74-179)||(45833907-45834011)
chr4 (25-149)||(22628477-22628602)
chr4 (31-150)||(38864970-38865086)
chr4 (16-162)||(49211027-49211175)
chr4 (18-148)||(53096599-53096730)
chr4 (16-83)||(8824964-8825030)
chr4 (16-83)||(30865891-30865958)
chr4 (16-142)||(41915985-41916111)
chr4 (34-162)||(41115864-41115993)
chr4 (102-178)||(23607440-23607516)
chr4 (16-89)||(43968781-43968854)
chr4 (16-89)||(54018500-54018573)
chr4 (16-135)||(16461135-16461254)
chr4 (16-147)||(11346980-11347116)
chr4 (109-155)||(18743264-18743311)
chr4 (109-152)||(42426878-42426921)
chr4 (16-65)||(53779428-53779477)
chr4 (19-67)||(2574122-2574170)
chr4 (131-178)||(8489458-8489505)
chr4 (16-162)||(24030625-24030772)
chr4 (114-157)||(35547729-35547772)
chr4 (106-161)||(40047063-40047118)
chr4 (16-150)||(44500493-44500628)
chr4 (105-156)||(51788881-51788932)
chr4 (34-80)||(15839733-15839779)
chr4 (105-159)||(32409579-32409633)
chr4 (36-90)||(51655147-51655201)
chr4 (133-163)||(51968064-51968094)
chr4 (121-154)||(6077898-6077931)
chr4 (120-161)||(23928192-23928233)
chr4 (119-148)||(30865979-30866008)
chr4 (133-162)||(44516219-44516248)
chr4 (16-52)||(5036047-5036083)
chr4 (16-80)||(25435963-25436027)
chr4 (105-161)||(51175611-51175667)
chr4 (138-178)||(56397023-56397063)
[»] chr1 (46 HSPs)
chr1 (16-178)||(13984038-13984200)
chr1 (16-178)||(47783615-47783777)
chr1 (16-178)||(43822776-43822938)
chr1 (29-178)||(32451720-32451868)
chr1 (16-163)||(11120553-11120699)
chr1 (16-150)||(23333760-23333894)
chr1 (16-172)||(32851727-32851883)
chr1 (16-167)||(25813737-25813887)
chr1 (16-162)||(52353766-52353912)
chr1 (16-150)||(42831645-42831780)
chr1 (16-162)||(36166892-36167037)
chr1 (16-179)||(11241439-11241603)
chr1 (16-162)||(27544372-27544518)
chr1 (16-150)||(51263190-51263323)
chr1 (16-139)||(44665316-44665440)
chr1 (100-178)||(38902048-38902126)
chr1 (16-149)||(49003354-49003488)
chr1 (17-90)||(11569967-11570040)
chr1 (110-159)||(37073759-37073808)
chr1 (19-158)||(51061601-51061742)
chr1 (31-80)||(3623108-3623157)
chr1 (17-90)||(11566929-11567002)
chr1 (16-96)||(9505527-9505607)
chr1 (16-127)||(40287000-40287109)
chr1 (116-159)||(23655162-23655205)
chr1 (16-67)||(36297983-36298034)
chr1 (105-163)||(32913947-32914005)
chr1 (109-163)||(35988311-35988365)
chr1 (16-61)||(38902007-38902052)
chr1 (29-152)||(14775153-14775277)
chr1 (106-150)||(24555822-24555866)
chr1 (25-159)||(43506267-43506403)
chr1 (109-149)||(46487070-46487110)
chr1 (71-150)||(47364377-47364457)
chr1 (121-160)||(15726923-15726962)
chr1 (109-163)||(39864334-39864389)
chr1 (25-59)||(24555864-24555898)
chr1 (16-65)||(641831-641879)
chr1 (110-162)||(17349811-17349864)
chr1 (122-162)||(33041572-33041613)
chr1 (25-90)||(35839047-35839112)
chr1 (126-159)||(37524181-37524214)
chr1 (16-163)||(38600938-38601085)
chr1 (105-162)||(42401089-42401146)
chr1 (16-163)||(22680379-22680527)
chr1 (126-178)||(51504494-51504546)
[»] chr6 (16 HSPs)
chr6 (16-178)||(32658387-32658549)
chr6 (16-178)||(5002330-5002494)
chr6 (20-144)||(22281763-22281887)
chr6 (20-178)||(32977333-32977492)
chr6 (44-152)||(33755768-33755876)
chr6 (16-175)||(7693887-7694047)
chr6 (16-130)||(21940941-21941055)
chr6 (31-150)||(387740-387860)
chr6 (16-163)||(6988176-6988323)
chr6 (16-68)||(25099077-25099129)
chr6 (119-167)||(3705692-3705740)
chr6 (16-68)||(18804248-18804300)
chr6 (16-59)||(9491836-9491879)
chr6 (119-162)||(24072523-24072566)
chr6 (119-163)||(3436014-3436058)
chr6 (127-167)||(19069600-19069640)
[»] chr5 (31 HSPs)
chr5 (16-152)||(2375548-2375684)
chr5 (16-157)||(1309745-1309886)
chr5 (16-178)||(13420670-13420832)
chr5 (16-178)||(18396480-18396642)
chr5 (16-162)||(41520839-41520986)
chr5 (16-162)||(26675457-26675603)
chr5 (16-162)||(26947065-26947211)
chr5 (16-125)||(13486584-13486693)
chr5 (16-116)||(42951756-42951856)
chr5 (16-178)||(7293046-7293208)
chr5 (25-162)||(29558346-29558483)
chr5 (16-149)||(35463217-35463352)
chr5 (19-162)||(1666750-1666893)
chr5 (16-96)||(15468166-15468246)
chr5 (31-162)||(12593141-12593272)
chr5 (25-162)||(4432339-4432477)
chr5 (41-150)||(33133237-33133346)
chr5 (16-149)||(11200736-11200872)
chr5 (16-68)||(20420169-20420221)
chr5 (75-162)||(42551057-42551145)
chr5 (16-65)||(14642291-14642339)
chr5 (105-161)||(15958687-15958743)
chr5 (110-162)||(25324255-25324307)
chr5 (16-155)||(34382456-34382596)
chr5 (120-163)||(2970350-2970393)
chr5 (102-161)||(8516874-8516933)
chr5 (16-59)||(35982144-35982187)
chr5 (105-161)||(4277376-4277432)
chr5 (119-167)||(11200498-11200546)
chr5 (102-162)||(31051398-31051458)
chr5 (110-154)||(32080325-32080369)
[»] chr3 (33 HSPs)
chr3 (35-162)||(35539609-35539736)
chr3 (16-162)||(46006056-46006201)
chr3 (16-145)||(36902318-36902447)
chr3 (39-162)||(13755130-13755251)
chr3 (39-162)||(13768531-13768652)
chr3 (16-163)||(41211984-41212131)
chr3 (16-163)||(36277737-36277889)
chr3 (16-178)||(45603396-45603562)
chr3 (16-150)||(46048883-46049019)
chr3 (31-178)||(49109019-49109167)
chr3 (16-60)||(55272808-55272852)
chr3 (103-150)||(55272857-55272904)
chr3 (16-178)||(26085067-26085220)
chr3 (53-163)||(33290924-33291033)
chr3 (16-90)||(52995702-52995776)
chr3 (102-159)||(52393728-52393785)
chr3 (110-157)||(40242167-40242214)
chr3 (105-159)||(29950766-29950820)
chr3 (105-159)||(29999920-29999974)
chr3 (18-149)||(30595071-30595203)
chr3 (18-129)||(54422727-54422838)
chr3 (111-162)||(54043493-54043544)
chr3 (133-163)||(7325505-7325535)
chr3 (105-159)||(40485072-40485126)
chr3 (116-162)||(44110931-44110977)
chr3 (16-65)||(41211735-41211784)
chr3 (106-150)||(3973249-3973293)
chr3 (106-150)||(3993811-3993855)
chr3 (106-150)||(3996583-3996627)
chr3 (106-150)||(4010122-4010166)
chr3 (16-96)||(33831984-33832064)
chr3 (130-178)||(36619273-36619321)
chr3 (122-178)||(55222597-55222653)
[»] chr7 (41 HSPs)
chr7 (16-150)||(43302108-43302242)
chr7 (16-145)||(36482001-36482130)
chr7 (16-150)||(36657878-36658012)
chr7 (16-163)||(31330394-31330542)
chr7 (16-167)||(23156213-23156364)
chr7 (16-138)||(37698488-37698610)
chr7 (16-162)||(4958238-4958388)
chr7 (16-142)||(36901033-36901161)
chr7 (16-150)||(36656598-36656732)
chr7 (16-158)||(29914383-29914527)
chr7 (16-162)||(19987159-19987306)
chr7 (16-162)||(44441591-44441738)
chr7 (16-162)||(48767131-48767281)
chr7 (16-144)||(2008589-2008718)
chr7 (16-162)||(46282108-46282254)
chr7 (16-96)||(39853769-39853849)
chr7 (16-150)||(47841411-47841546)
chr7 (16-142)||(6068097-6068223)
chr7 (19-65)||(19594052-19594098)
chr7 (16-162)||(38223975-38224124)
chr7 (109-163)||(46748009-46748063)
chr7 (16-96)||(13057869-13057950)
chr7 (77-178)||(30859633-30859734)
chr7 (16-162)||(5513823-5513971)
chr7 (16-80)||(15018379-15018443)
chr7 (16-159)||(25307463-25307607)
chr7 (116-152)||(27334472-27334508)
chr7 (16-67)||(36039055-36039106)
chr7 (109-162)||(9429732-9429785)
chr7 (109-162)||(29770797-29770850)
chr7 (16-162)||(32724231-32724381)
chr7 (16-80)||(44441347-44441411)
chr7 (16-51)||(2888144-2888179)
chr7 (119-162)||(31322290-31322333)
chr7 (16-67)||(43095509-43095560)
chr7 (16-65)||(4874941-4874990)
chr7 (133-162)||(19735863-19735892)
chr7 (16-57)||(23802216-23802257)
chr7 (109-146)||(38360778-38360815)
chr7 (19-59)||(19753042-19753082)
chr7 (105-161)||(43788614-43788670)
[»] chr2 (34 HSPs)
chr2 (25-158)||(9583151-9583284)
chr2 (16-178)||(11921944-11922106)
chr2 (25-178)||(6710833-6710986)
chr2 (16-178)||(14772887-14773048)
chr2 (16-162)||(26312471-26312617)
chr2 (16-162)||(36887546-36887693)
chr2 (16-162)||(34375050-34375194)
chr2 (16-149)||(65383-65517)
chr2 (30-139)||(18970010-18970120)
chr2 (16-161)||(5038711-5038859)
chr2 (36-162)||(37347814-37347944)
chr2 (16-89)||(44887291-44887364)
chr2 (16-150)||(3668838-3668973)
chr2 (16-155)||(32887588-32887726)
chr2 (25-159)||(41068777-41068905)
chr2 (16-90)||(40999678-40999752)
chr2 (105-162)||(4634046-4634103)
chr2 (16-89)||(6459079-6459152)
chr2 (16-89)||(34234884-34234957)
chr2 (16-156)||(34820862-34821003)
chr2 (16-178)||(16117873-16118036)
chr2 (16-87)||(26297115-26297186)
chr2 (119-178)||(28857182-28857241)
chr2 (16-110)||(45135762-45135855)
chr2 (16-60)||(6562942-6562985)
chr2 (126-162)||(31050086-31050122)
chr2 (119-163)||(44887065-44887109)
chr2 (16-67)||(13022797-13022848)
chr2 (16-83)||(44583421-44583488)
chr2 (105-162)||(3703436-3703493)
chr2 (119-152)||(30465365-30465398)
chr2 (25-57)||(3949063-3949095)
chr2 (98-162)||(34178269-34178333)
chr2 (119-163)||(41000007-41000051)
[»] scaffold0017 (1 HSPs)
scaffold0017 (16-178)||(31764-31925)
[»] scaffold0991 (1 HSPs)
scaffold0991 (17-97)||(2926-3006)
[»] scaffold0036 (2 HSPs)
scaffold0036 (16-139)||(2073-2195)
scaffold0036 (101-150)||(63636-63685)
[»] scaffold0040 (2 HSPs)
scaffold0040 (116-162)||(59700-59746)
scaffold0040 (119-164)||(55753-55798)
[»] scaffold0712 (1 HSPs)
scaffold0712 (16-69)||(6131-6184)
[»] scaffold0709 (1 HSPs)
scaffold0709 (16-69)||(6149-6202)
[»] scaffold0528 (1 HSPs)
scaffold0528 (102-162)||(1483-1543)


Alignment Details
Target: chr8 (Bit Score: 382; Significance: 0; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 16 - 474
Target Start/End: Complemental strand, 31128680 - 31128222
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||     
T  31128680 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtaggtctcatttaagaactttgtgagagatttaggttagagtgattgaa 31128581  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccatttttaggttcttattaagaacccaaaaataagtatttct 215  Q
    || |||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31128580 tgcttattaggtactactattaaaaaattataaatgagtgatgtgtatgcgtgagacccatttttaggttcttattaagaacccaaaaataagtatttct 31128481  T
Q  216 attgtggatgctctaaaggttggtccaagatagctatgagattctagtttgaagagtatttacaaaattgatttgccctgttgagtcgacatgtttaact 315  Q
    |||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31128480 attgtggatgctctaaaggttggtccaagatagcaaaaagattctagtttaaagagtatttacaaaattgatttgccctgttgagtcgacatgtttaact 31128381  T
Q  316 tgttannnnnnngcatggcaagttggatttttaactcgtcactatgagacattctttttaggtccctcgatatgttttaggtctcttaaagttccgattt 415  Q
    |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31128380 tgttatttttttgcatggcaagttggatttttaactcgtcactatgagacattctttttaggtccctcgatatgttttaggtctcttaaagttccgattt 31128281  T
Q  416 tctgagattggtagatatctcttggatcgtttgttttataaaactaagcatggaactaa 474  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31128280 tctgtgattggtagatatctcttggatcgtttgttttataaaactaagcatggaactaa 31128222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 18806692 - 18806546
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| || |||||| |||||||  ||| ||||||| ||     
T  18806692 aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaaaaaatttgtgtgagatctaggtttgagtgatcgaa 18806593  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  18806592 tgtttattagatactactattaaaaaattataaataagtgatgtgta 18806546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 2603196 - 2603057
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||  || ||| |||||||    
T  2603196 aatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtggatctcatttaagaactttgtgtgagatctggattggagggattgag 2603097  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatg 155  Q
    |  ||||||| |||||||||||||||||||||||||||||    
T  2603096 tacttattagatactactattaaaaaattataaataaatg 2603057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 31226593 - 31226447
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| | |||| | || ||||||||||||||||| |||||||  ||| ||||| |||||    
T  31226593 aatattaaaaaattgaaatataatgatataaaattattgatagttgagtagtgggtcccatttaagaactttgtgtgagatctaggttggagtgtttgag 31226494  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    | ||||||||||||||||||||||||||||||||| | |||||||||    
T  31226493 tatttattaggtactactattaaaaaattataaatgagtgatgtgta 31226447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 5535917 - 5535771
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||| || | |  | ||||||||||||||| |||||||  ||| |||||||||||    
T  5535917 aatattaaaaaattgaaatataatgatataaagttattgaaagttgatttgtgggttccgtttaagaactttgtgtgagatctaggttggagtgattgag 5535818  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||| |||||||| |||||||||||||||||| | |||||||||    
T  5535817 tgcttataaggtactaatattaaaaaattataaatgagtgatgtgta 5535771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 35973510 - 35973373
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||||| |||||||||||||| |||||||||| || |||||||||||||||||||||| | |||| |||||  |||||| ||  |||| |    
T  35973510 aatattaaaaaattgatatataatgatataatgttattgataattgattagtagatctcatttaagaaatgtgtgtgagatattgagttggatggattaa 35973411  T
Q  115 gtgtttattaggtactactattaaaaaattataaataa 152  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  35973410 gtgtttattaggtacaactattaaaaaattataaataa 35973373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 14426244 - 14426098
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| ||||  ||||||||||| ||||||||| || | ||||   || ||||||||||||||||| |||||||||||| |||||||||||    
T  14426244 aatattaaaaaattaaaattaaatgatataaaattattgataattgagtagtgagtcccatttaagaactttgtgtgagatctgagttggagtgattgag 14426145  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||| | | |||||||||||||||| || |||||||||    
T  14426144 tgtttattaggtattgcaattaaaaaattataaagaagtgatgtgta 14426098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 6519164 - 6519026
Alignment:
Q  18 tattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtg 117  Q
    |||||| |||||||||| ||||||||||||||||||||||||| ||||||   ||||||||||||| |||||||||   ||| ||| ||| |||||| |     
T  6519164 tattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaatttgtgaga-tgctgggttggagagattgaatt 6519066  T
Q  118 tttattaggtactactattaaaaaattataaataaatgat 157  Q
     |||||||||||||||||||||||||||||||||| ||||    
T  6519065 cttattaggtactactattaaaaaattataaataagtgat 6519026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 162
Target Start/End: Complemental strand, 1155240 - 1155114
Alignment:
Q  36 taatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactactat 135  Q
    ||||||||||||||||||| ||||| |||| ||  ||||||||||||| |||||| |||||||| ||| ||| |||||| || ||||||| |||||||||    
T  1155240 taatgatataaagttattggtagttgattaatatgtctcatttaagaaatttgtgtgagatctgggttggagggattgaatgcttattagatactactat 1155141  T
Q  136 taaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||| | |||||||||    
T  1155140 taaaaaattataaatgagtgatgtgta 1155114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 11777791 - 11777645
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| || ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| || || ||  ||  || ||||||     
T  11777791 aatattaaaaagttgaaatgtaatgatataaagttattgatagttgattagtaggtctcatttaagaaatttgtgtgatatatggattgcagggattgaa 11777692  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || || ||||||||||||||||| ||||||||||| |||||| ||||    
T  11777691 tgcttgttaggtactactattaagaaattataaatgaatgatttgta 11777645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 5978631 - 5978535
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgttta 121  Q
    |||||||||||||||||||||||||||||||||||| |||||| | || |||||||||||||||||  ||||||| ||| |||||||||||||||||    
T  5978631 aaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtcagatctgggttggagtgattgagtgttta 5978535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 3628229 - 3628374
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||| || ||||||||||||||||||| ||||| |||| |  || ||||||||||| ||||||||| | ||||||| |||  ||| ||    
T  3628229 aatattaaaaaattgagatgtaatgatataaagttattgctagttgattaatgaatttcatttaagaaatttgtgagata-ctgagttggaggaatttag 3628327  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||||| | |||||||||||||||||||||||||||||| ||||    
T  3628328 tgcttattaagcactactattaaaaaattataaataaatgatatgta 3628374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 16531693 - 16531567
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||| |||||  |||||||  ||| || ||||||||    
T  16531693 aatattaaaaaattgaaatataatgatataaagttatgaatagttgattagtagatctcttttaagaattttgtatgagatctaggttggaatgattgag 16531594  T
Q  116 tgtttattaggtactactattaaaaaa 142  Q
    || ||||||  || |||||||||||||    
T  16531593 tgcttattaaatattactattaaaaaa 16531567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 9134151 - 9134248
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||| |||||||  ||| |||||||||    
T  9134151 aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgagtctcatttaagaactttgtgtgagatctaggtttgagtgattg 9134248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 23982244 - 23982395
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagta----gatctcatttaagaactttgtgagagatctgagttagagtgat 111  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  ||||||    |||| |||||||||||||||||  ||||||| ||| |||||||    
T  23982244 aatattaaaaaattgaaatataatgatataaagttattgatagttggttagtacgtggatcccatttaagaactttgtgtaagatctgggttggagtgat 23982343  T
Q  112 tgagtgtttattaggta-ctactattaaaaaattataaataaatgatgtgta 162  Q
    || ||  |||||| |||  |  |||||||||||||||||| | |||||||||    
T  23982344 tgggtcattattaagtattttttattaaaaaattataaatgagtgatgtgta 23982395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 35468333 - 35468494
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||| || ||  |||||||||||||||||| ||||||   |||||||||||||||||| | |||||| | ||| ||| |||||||    
T  35468333 aatattaaaaaattcaaatgtagtggcataaagttattgatagttaattagtgagtctcatttaagaactttgagtgagatcagtgttggagggattgag 35468432  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |  |||||| ||||| ||||| ||||||||||||| | ||||||||| |||| ||||||||||    
T  35468433 tacttattaagtactgctatt-aaaaattataaatgagtgatgtgtacgcgtgagacccattt 35468494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 28540671 - 28540806
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| |||||||||| ||||||||||||  ||||||||||| ||||||   |||| |||||||| |||||| ||||| ||| ||| |||| |||||    
T  28540671 aatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgagtctcttttaagaaatttgtgtgagatgctgggttggagtaattga 28540770  T
Q  115 gtgtttattaggtactactattaaaaaattataaat 150  Q
     |  |||||| |||||||||||||||||||||||||    
T  28540771 atacttattaagtactactattaaaaaattataaat 28540806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 5139799 - 5139654
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||  ||||||||||||||||| |||||||||||| ||||||   | |||||||||| ||||||| |||||||| ||| |||||||| ||    
T  5139799 aatattaaaaaatgaaaatataatgatataaaattattgatagttgattagtgagtttcatttaagagctttgtgtgagatctgggttggagtgattaag 5139700  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |  ||||||||||||||  | ||||||||||||| || | |||||||    
T  5139699 t-attattaggtactacattaaaaaaattataaacaagttatgtgta 5139654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 13629161 - 13629014
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatct-gagttagagtgattga 114  Q
    |||||||| ||||||| || ||||| ||||||||||||||||||| |||  | ||||  ||||||||| |||||  ||||| | | ||| ||| ||||||    
T  13629161 aatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggagggattga 13629062  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
     |  ||||||| |||||||||||||||||||||||| |||||||||||    
T  13629061 ctacttattagatactactattaaaaaattataaatgaatgatgtgta 13629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 13729573 - 13729426
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatct-gagttagagtgattga 114  Q
    |||||||| ||||||| || ||||| ||||||||||||||||||| |||  | ||||  ||||||||| |||||  ||||| | | ||| ||| ||||||    
T  13729573 aatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggagggattga 13729474  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
     |  ||||||| |||||||||||||||||||||||| |||||||||||    
T  13729473 ctacttattagatactactattaaaaaattataaatgaatgatgtgta 13729426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 37673885 - 37673729
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||  ||| || ||||||||| |||||||||||| |||||| | ||  |||||||||||||||| ||||||||  || ||| |||| ||    
T  37673885 aatattaaaaaattagaatgtagtgatataaaattattgatagttgattagtgggtccaatttaagaactttgtgtgagatctggattggagggattaag 37673786  T
Q  116 t---gt--ttattaggtactactattaaaaaattataaataaatgatgtgtatgcgt 167  Q
    |   ||  |||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  37673785 ttaagtacttattaggtactactattaaaaaattataaatgagtgatgtgtacgcgt 37673729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 9604622 - 9604491
Alignment:
Q  20 ttaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgt 118  Q
    |||| |||||||||| ||||||||||||||||||||||||| |||||| | |  |||||||||| ||| |  ||||| ||| ||| ||  ||||||||      
T  9604622 ttaaaaaattgaaatctaatgatataaagttattgatagttgattagtgggttccatttaagaaatttttatgagatgctgggttggatggattgagttc 9604523  T
Q  119 ttattaggtactactattaaaaaattataaat 150  Q
    ||||||| ||||| ||||||||||||||||||    
T  9604522 ttattagatactattattaaaaaattataaat 9604491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 23036794 - 23036941
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||||| || |||||||||||| |||||||||||| || ||| ||| ||  ||||||| |||||| ||||| ||| |||  || ||||||    
T  23036794 aatattaaaaaattgatatgtaatgatataaaattattgatagttgatcagtggatttctattaagaaatttgtgtgagatgctgggttgaagagattga 23036893  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||  ||||||| |||||||||| ||||||||||| | | |||||||||    
T  23036894 gttcttattagatactactattgaaaaattataattgagtgatgtgta 23036941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 7288239 - 7288364
Alignment:
Q  33 atataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggtacta 131  Q
    |||||||||||||||||||| ||||||| |||||||  ||||||||||||| ||| |  ||||| ||| ||| ||| |||| |||  ||||||| |||||    
T  7288239 atataatgatataaagttatcgatagttgattagtaagtctcatttaagaaatttctatgagatgctgggttggagggattaagttcttattagatacta 7288338  T
Q  132 ctattaaaaaattataaataaatgat 157  Q
    |||| ||| |||||||||||| ||||    
T  7288339 ctatgaaacaattataaataagtgat 7288364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 38937792 - 38937939
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| | || | ||||||||||||| ||||||||| ||| || ||||  |||||| ||||||||| |||||  || ||| ||| ||||||    
T  38937792 aatattaaaaaattaatatgtgatgatataaagttgttgatagttgatttgtggatcctatttaaaaactttgtgtgagatgttgtgttggagggattga 38937891  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||  |||||||||   |||||||||||||||||||||| |||| ||||    
T  38937892 gttcttattaggtgtcactattaaaaaattataaataagtgatatgta 38937939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 9133803 - 9133899
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattg 113  Q
    |||||||  |||||||||||||||||||||| ||| ||| ||||| ||||||   |||||||||||||||||||| |||||||  ||| |||||||||    
T  9133803 aatattagaaaattgaaatataatgatataa-gtttttggtagttgattagtgagtctcatttaagaactttgtgtgagatctaggtttgagtgattg 9133899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 6427226 - 6427146
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat 96  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||| ||  |||||| || |||||| |||||    
T  6427226 aatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtcctatttaaaaaatttgtgtgagat 6427146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 28567807 - 28567851
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtt 60  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  28567807 aatattaaaaaattgaaatataatgatataaagttattgatagtt 28567851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 28575400 - 28575444
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtt 60  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  28575400 aatattaaaaaattgaaatataatgatataaagttattgatagtt 28575444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 29811510 - 29811573
Alignment:
Q  100 agttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    |||| ||||||||||||||||||||  ||||| |||||||||||||||||||||| ||| ||||    
T  29811510 agtttgagtgattgagtgtttattatttactattattaaaaaattataaataaattatgagtat 29811573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 8673723 - 8673597
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||  |||| || |||||||||||| |||||| || |||||| | ||  |||||| || ||| || ||||| ||| ||| ||| ||||||    
T  8673723 aatattaaaaaatgaaaatgtagtgatataaagtttttgataattgattagtgggtcaaatttaaaaaatttatgtgagatgctgggttggagagattga 8673624  T
Q  115 gtgtttattaggtactactattaaaaa 141  Q
    ||| |||||||||||||||||||||||    
T  8673623 gtgcttattaggtactactattaaaaa 8673597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 28557246 - 28557392
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgag-ttagagtgattga 114  Q
    |||||||| |||||||||| |||| |||||||  | ||||||||| ||||||   |||| ||||| ||  || || ||||||  || || |||  |||||    
T  28557246 aatattaaaaaattgaaatgtaataatataaaagtgttgatagttgattagtgagtctcttttaaaaaaattatgtgagatcctaggttggaggaattga 28557345  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    ||  |||||||||||||||||||||||||||||||| | ||||||||    
T  28557346 gtagttattaggtactactattaaaaaattataaattagtgatgtgt 28557392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 4797358 - 4797222
Alignment:
Q  16 aatattaacaaattgaaatataatgatat-aaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattg 113  Q
    |||||||| ||||| |||| | ||||||| |||||||||||||||| |||| |   || |||||||||| |||||| ||||| ||||||| ||| ||||     
T  4797358 aatattaaaaaattaaaatgtgatgatattaaagttattgatagttgattaatgagtcacatttaagaaatttgtgtgagatgctgagttggagggatta 4797259  T
Q  114 agtgtttattaggtactactattaaaaaattataaat 150  Q
      | |||||||  | ||||||||||||||||||||||    
T  4797258 gatatttattaaatgctactattaaaaaattataaat 4797222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 23812686 - 23812560
Alignment:
Q  26 aattgaaatataatgatataaagttattgatagtttattagtagatctcattt-aagaactttgtgagagat-ctgagttagagtgattgagtgtttatt 123  Q
    |||||||||||||| |||||||||||||||||||| ||||||  ||  ||||| || || |||||| ||||| ||   || ||| ||||||||| |||||    
T  23812686 aattgaaatataattatataaagttattgatagttgattagtgaataccatttaaaaaattttgtgtgagatgctagattggagagattgagtgcttatt 23812587  T
Q  124 aggtactactattaaaaaattataaat 150  Q
    ||||||||  |||||||| ||| ||||    
T  23812586 aggtactataattaaaaacttaaaaat 23812560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 9135092 - 9135163
Alignment:
Q  106 agtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||| | |||| ||||  ||| ||||||||||    
T  9135092 agtgattgagtgcttattaggtactactatt-aaaaattgtaaatgagtgatatgtacacgtgagacccattt 9135163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 12734043 - 12734122
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat 96  Q
    |||||||| ||||| |||| |||||||||||||||   ||||||| |||||| | ||||||||||||| |||||| |||||    
T  12734043 aatattaaaaaattaaaatgtaatgatataaagttgaggatagttgattagt-ggtctcatttaagaaatttgtgtgagat 12734122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 28562309 - 28562349
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgat 56  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  28562309 aatattaaaaaattgaaatataataatataaagttattgat 28562349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 43976703 - 43976759
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    |||| |||||||  ||| ||||||||  |||||||||||||||||||||||||||||    
T  43976703 gagtcattgagtccttaataggtacttttattaaaaaattataaataaatgatgtgt 43976759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 10954196 - 10954145
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagt 67  Q
    |||||||| |||||||||| |||||||||||| | |||||||||| ||||||    
T  10954196 aatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagt 10954145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 10962201 - 10962150
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagt 67  Q
    |||||||| |||||||||| |||||||||||| | |||||||||| ||||||    
T  10962201 aatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagt 10962150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 13079882 - 13079917
Alignment:
Q  115 gtgtttattaggtactactattaaaaaattataaat 150  Q
    |||||||||||||||||||||| |||||||||||||    
T  13079882 gtgtttattaggtactactattcaaaaattataaat 13079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 36317074 - 36317117
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||||||||||| ||| || ||||||||||||||||||||||    
T  36317074 ttattaggtactacgattgaataattataaataaatgatgtgta 36317117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 5569228 - 5569278
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattag 66  Q
    |||||||| ||||| |||| ||||||||||| ||||||||||||| |||||    
T  5569228 aatattaaaaaattcaaatgtaatgatataatgttattgatagttgattag 5569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 29416713 - 29416767
Alignment:
Q  120 tattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagaccc 174  Q
    |||||||||||| ||||||||||| ||||| ||||||||||| |  |||||||||    
T  29416713 tattaggtactattattaaaaaataataaagaaatgatgtgtctatgtaagaccc 29416767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 30714158 - 30714036
Alignment:
Q  31 aaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggtac 129  Q
    |||| ||||||||||||||||||||||||| ||||||   || ||||||  || |||||| |||||  ||  || ||   ||| |||| |||||| ||||    
T  30714158 aaatgtaatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtac 30714059  T
Q  130 tactattaaaaaattataaataa 152  Q
    ||||||||||| |||||||||||    
T  30714058 tactattaaaatattataaataa 30714036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 30721935 - 30721813
Alignment:
Q  31 aaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggtac 129  Q
    |||| ||||||||||||||||||||||||| ||||||   || ||||||  || |||||| |||||  ||  || ||   ||| |||| |||||| ||||    
T  30721935 aaatgtaatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtac 30721836  T
Q  130 tactattaaaaaattataaataa 152  Q
    ||||||||||| |||||||||||    
T  30721835 tactattaaaatattataaataa 30721813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 36815871 - 36815817
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||| ||| ||||||| || ||||||||||||| |||||||||||||| |||||    
T  36815871 gattgcgtgcttattagatattactattaaaaaaatataaataaatgatatgtat 36815817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 44104241 - 44104275
Alignment:
Q  120 tattaggtactactattaaaaaattataaataaat 154  Q
    |||||||||||| ||||||||||||||||||||||    
T  44104241 tattaggtactattattaaaaaattataaataaat 44104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 1737852 - 1737803
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttatta 65  Q
    ||||| || |||||||||| |||| |||||||||||||||||||| ||||    
T  1737852 aatataaaaaaattgaaatgtaataatataaagttattgatagttgatta 1737803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 12795917 - 12795888
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||||||||||||||||||    
T  12795917 tattaaaaaattataaataaatgatgtgta 12795888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 22800549 - 22800520
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||||||||||||||||||    
T  22800549 tattaaaaaattataaataaatgatgtgta 22800520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 38230359 - 38230314
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||||||||||||||||||||| |||||||| |||| | ||||||||    
T  38230359 tattaaaaaattataaataaaagatgtgtacgcgtgaaacccattt 38230314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 7177036 - 7177008
Alignment:
Q  134 attaaaaaattataaataaatgatgtgta 162  Q
    |||||||||||||||||||||||||||||    
T  7177036 attaaaaaattataaataaatgatgtgta 7177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 161
Target Start/End: Complemental strand, 14523147 - 14523119
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgt 161  Q
    |||||||||||||||||||||||||||||    
T  14523147 tattaaaaaattataaataaatgatgtgt 14523119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 35893475 - 35893527
Alignment:
Q  110 attgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||| || ||||||  ||||||||||||||||||||||| |||| |||||||    
T  35893475 attgactgcttattaaatactactattaaaaaattataaagaaataatgtgta 35893527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 36316762 - 36316805
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtt 60  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||    
T  36316762 aatattaa-aaattgaaatgtaatgatataaaattattgatagtt 36316805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 35332107 - 35331960
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| |||||||| ||| |||||||||||    
T  35332107 aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaagaactttgtgtgagatctgggttggagtgattgag 35332008  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    || |||||| ||||||||||||||||| ||||||||| | ||||||||    
T  35332007 tgcttattatgtactactattaaaaaagtataaataagtaatgtgtat 35331960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 39629317 - 39629169
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||  ||||| |||||||||||||||||||||| | |||||| ||| |||||||| ||    
T  39629317 aatattaaaaaattgaaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgggttggagtgatttag 39629218  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatg 164  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  39629217 tgcttattagatactactattaaaaaattataaataaatgatgtgtatg 39629169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 23359102 - 23359249
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||||| || |||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||  ||| |||||||||||    
T  23359102 aatattaaaaaattgaaatattataatataaagttattgatagttgatttgtggatctcatttaagaactttgtgtgagatctaggttggagtgattgag 23359201  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    || ||||||| |||||||||||||||||||||||| ||||||||||||    
T  23359202 tgcttattagatactactattaaaaaattataaatgaatgatgtgtat 23359249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 39055162 - 39055324
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||| |||||| | | |||||||||||||||||| |||||||||||| ||| |||| |     
T  39055162 aatattaaaaaattaaaatgtaatgatataaagttattgatagttgattagtgggtttcatttaagaactttgtgtgagatctgagttggagggatttaa 39055261  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |  ||||||||||||| |||||||||||||||||| | ||||||||| |||| ||||||||||    
T  39055262 tacttattaggtactaatattaaaaaattataaatgagtgatgtgtacgcgtgagacccattt 39055324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 35382487 - 35382341
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||| | ||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||||||||||| || ||||| ||| ||||||||||     
T  35382487 aatatttaaaaattgaaatataatgatataaagttagtgatagttgattagtgtgtctcatttaagaactttgtgtgaaatctgggttggagtgattgaa 35382388  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||||| ||||||||||||||||||||||||| ||||| |||||    
T  35382387 tgcttattatgtactactattaaaaaattataaatgaatgaggtgta 35382341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 52199803 - 52199937
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||||||||| | |||||||||||  |||||| | || ||||||||||||||||| |||||||| ||| ||||||||||     
T  52199803 aatattaaaaaattgaaatataatgatatataattattgatagtggattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgaa 52199902  T
Q  116 tgtttattaggtactactattaaaaaattataaat 150  Q
    || ||||||||||||||||||||||||||||||||    
T  52199903 tgcttattaggtactactattaaaaaattataaat 52199937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 822503 - 822357
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| || |||||||| ||||||||||||| |||| |   |||||||||||||||||||| |||||||| ||| ||| |||||||    
T  822503 aatattaaaaaattgaaatgtagtgatataatgttattgatagttgattaatgtgtctcatttaagaactttgtgtgagatctgggttggagggattgag 822404  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |  ||||||| |||||||||||||||| |||||||||||||||||||    
T  822403 tacttattagatactactattaaaaaactataaataaatgatgtgta 822357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 2396298 - 2396445
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| || ||||||| || |||||||||||||||||||||| |||||| | |  |||||||||| ||| || ||||| ||||||| ||| ||||||    
T  2396298 aatattaaaaacttgaaatgtactgatataaagttattgatagttgattagtgggttccatttaagaaatttttgtgagatgctgagtttgagcgattga 2396397  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||  |||||||||||||||||||| ||||||||||||| |||||||||    
T  2396398 gttcttattaggtactactattaacaaattataaataagtgatgtgta 2396445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 10180737 - 10180603
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||||| || ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||  |||| ||  ||| |||  |||||    
T  10180737 aatattaaaaaattgatatgtaatgatataaagttattgatagttgatt-gtggatctcatttaagaaatttgtgtaagatgctaggttggaggcattga 10180639  T
Q  115 gtgtttattaggtactactattaaaaaattataaat 150  Q
    ||  ||||||||||||||||||||||||||||||||    
T  10180638 gttcttattaggtactactattaaaaaattataaat 10180603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 35144388 - 35144550
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| ||||| |||||| ||||| || |||||| ||| |||   ||||||||| |||||  |||||||| ||| ||| ||||||     
T  35144388 aatattaaaaaattgaaatgtaatggtataaaattattaatggtttatcagtggattctatttaagaaatttgtatgagatctgggttggagggattgaa 35144487  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    || ||||||| |||||||| ||||||||||||||||| |||| ||||  ||| ||||||||||    
T  35144488 tgcttattagatactactactaaaaaattataaataattgatatgtacacgtgagacccattt 35144550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 12447422 - 12447565
Alignment:
Q  20 ttaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgt 118  Q
    |||| |||||||||| ||||||||||||||||||||||||| |||||| | ||| ||||||||| ||| || ||||| ||| |||| |  ||||||||      
T  12447422 ttaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggtcttatttaagaaatttttgtgagatgctgggttaaaaggattgagttc 12447521  T
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||   ||||||||||||||||||||||||| |||| ||||    
T  12447522 ttattatagactactattaaaaaattataaataagtgatttgta 12447565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 35309109 - 35308946
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||||   || ||||||| ||  ||||| ||| | ||  | ||||| ||||||    
T  35309109 aatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgagtcccatttaaaaaaattgtgtgagttgctaggctagagggattga 35309010  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||  ||||||| || ||||||||||||||||||||||| ||| ||||| |||| |||| |||||    
T  35309009 gtacttattagatattactattaaaaaattataaataagtgacgtgtacgcgtgagactcattt 35308946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 45833907 - 45834011
Alignment:
Q  74 catttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacc 173  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||| ||||||  || ||||||||||||||||||||| | |||||||||  ||| |||||    
T  45833907 catttaagaactttgtgtgagatctgggttggagtgattgagtgcttatta-atattactattaaaaaattataaatgagtgatgtgtacacgtgagacc 45834005  T
Q  174 catttt 179  Q
    ||||||    
T  45834006 catttt 45834011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 22628477 - 22628602
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatct-gagttagagtgattgagtgtttatt 123  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||   || ||||||| || |||||| | ||| | | || |||| |||||||||||||||    
T  22628477 aaattaaaatgtaatgatataaagttattgatagttgattagtgagtcccatttaaaaaatttgtgtgtgatattgggtcagagagattgagtgtttatt 22628576  T
Q  124 aggtactactattaaaaaattataaa 149  Q
    | ||||| ||||||||||||||||||    
T  22628577 atgtactcctattaaaaaattataaa 22628602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 38865086 - 38864970
Alignment:
Q  31 aaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtact 130  Q
    |||||||| |||||||| || ||||||||| ||| || |||| |   ||||||||||||| |||||||| ||| |||||||| |||| || ||| |||||    
T  38865086 aaatataacgatataaaattgttgatagttgattggtggatccc---taagaactttgtgtgagatctgggttggagtgattaagtgctttttaagtact 38864990  T
Q  131 actattaaaaaattataaat 150  Q
    ||||||||||||||||||||    
T  38864989 actattaaaaaattataaat 38864970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 49211027 - 49211175
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| |||| |||||||||||||||||||||| || |||| | | ||||||||||| | ||| || ||||| ||  ||| ||| ||| ||    
T  49211027 aatattaaaaaattaaaatgtaatgatataaagttattgataattgattaatgggtctcatttaaggaatttttgtgagatgctaggttggagggataga 49211126  T
Q  115 gtgtttattaggtactactatt-aaaaaattataaataaatgatgtgta 162  Q
    ||  ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  49211127 gttcttattagatactactattaaaaaaattataaataaatgatatgta 49211175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 53096730 - 53096599
Alignment:
Q  18 tattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagt 116  Q
    |||||| || |||| || |||| |||||||||||||||||||| |||||| | || |||||||||| |||||| |||||  || |||| || ||||||||    
T  53096730 tattaaaaatttgatatgtaataatataaagttattgatagttgattagttggtcccatttaagaaatttgtgtgagatgttgggttaaagggattgagt 53096631  T
Q  117 gtttattaggtactactattaaaaaattataa 148  Q
      |||||| ||| |||||||||||||||||||    
T  53096630 tcttattaagtattactattaaaaaattataa 53096599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 8824964 - 8825030
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaa 83  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |  ||||||||||    
T  8824964 aatattaa-aaattgaaatataatgatataaagttattgatagttgattagtaggttccatttaagaa 8825030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 30865891 - 30865958
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaa 83  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||||   |||||||||||||    
T  30865891 aatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaa 30865958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 41916111 - 41915985
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||| || ||| |  | ||| |||||| || |||||  || || |||||||||| |||| ||    
T  41916111 aatattaaaaaattaaaatataatgatataaaattatttatacttgatttgagggtcttatttaataaatttgtatgaaatatgagttagagagattaag 41916012  T
Q  116 tgtttattaggtactactattaaaaaa 142  Q
    |||||||||  ||||||||||||||||    
T  41916011 tgtttattaaatactactattaaaaaa 41915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 41115864 - 41115993
Alignment:
Q  34 tataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctga-gttagagtgattgagtgtttattaggtactac 132  Q
    |||||| |||||||||||||||||| | | |||| |||||| |||||||| ||| || ||||| | | ||| | | |||||| |||||||||| ||||||    
T  41115864 tataataatataaagttattgatagatgagtagttgatctcgtttaagaagtttttgtgagatgttaggtttgtgggattgaatgtttattagatactac 41115963  T
Q  133 tattaaaaaattataaataaatgatgtgta 162  Q
    |||| ||||| ||||||||| |||| ||||    
T  41115964 tatttaaaaactataaataagtgatatgta 41115993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 23607440 - 23607516
Alignment:
Q  102 ttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||||| ||||||||  ||| ||| |||||||||||||||||||||||||| | |||||||| ||| ||||||||||    
T  23607440 ttagagagattgagttcttaatagatactactattaaaaaattataaataagtaatgtgtatacgtgagacccattt 23607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 43968781 - 43968854
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgt 89  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||| |||||| | ||  ||||||||| |||||    
T  43968781 aatattaaaaaattaaaatatagtgatataaagttattgatagttgattagtgggtcctatttaagaattttgt 43968854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 54018573 - 54018500
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgt 89  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||||||||||| | | |||||||| || |||||    
T  54018573 aatattaaaaaattgaaatataataatataaaattattgacagtttattagtgggtttcatttaaaaaatttgt 54018500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 16461135 - 16461254
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| || || ||||||||||||||||||||||||||| || |||| | ||| |||||||  ||  ||||| ||||| ||  ||||||| ||||||    
T  16461135 aatattaaaaacttaaaatataatgatataaagttattgataattgattaat-gatttcatttagaaatattgtgtgagatgctcggttagagggattga 16461233  T
Q  115 gtgtttattaggtactactat 135  Q
    ||| |||||||||| ||||||    
T  16461234 gtgcttattaggtattactat 16461254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 11346980 - 11347116
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctg----agttagagtga 110  Q
    |||||||  ||||| ||||||||||||||||| ||||| ||| || |||| |   ||||||||||||| |||||| ||||| |||     ||| ||| ||    
T  11346980 aatattataaaattaaaatataatgatataaaattattaataattgattaatgcgtctcatttaagaaatttgtgtgagatgctgggttggttggaggga 11347079  T
Q  111 ttgagtgtttattaggtactactattaaaaaattata 147  Q
    |||| |  |||||||||||||||||||||||||||||    
T  11347080 ttgaatacttattaggtactactattaaaaaattata 11347116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 18743311 - 18743264
Alignment:
Q  109 gattgagtgtttattaggtactactattaa-aaaattataaataaatg 155  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  18743311 gattgagtgcttattaggtactactattaaaaaaattataaataaatg 18743264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 42426921 - 42426878
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattataaataa 152  Q
    |||||||| |||||||| ||||||||||||||||||||||||||    
T  42426921 gattgagtttttattagatactactattaaaaaattataaataa 42426878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 53779477 - 53779428
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttatta 65  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  53779477 aatattaaaaaattaaaatataatgatattaagttattgatagttgatta 53779428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 2574170 - 2574122
Alignment:
Q  19 attaacaaattgaaatataatgatataaagttattgatagtttattagt 67  Q
    ||||| |||||||||| |||||||||||||||||| |||||| ||||||    
T  2574170 attaaaaaattgaaatgtaatgatataaagttattaatagttgattagt 2574122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 8489505 - 8489458
Alignment:
Q  131 actattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||||    
T  8489505 actattaaaaaattataaataagtgatgtatacacgtaagacccattt 8489458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 24030625 - 24030772
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| |||| |||| || ||||||||||||||||| |||||||||   |||| || |  |||||| |||||  | |||| ||  |||| |    
T  24030625 aatattaaaaaattaaaatgtaataatgtaaagttattgatagttgattagtagaatccattcaaaatatttgtgtgagatattaagtttgatggattaa 24030724  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||||| |||| |||| ||||||||||||||| || |||| ||||    
T  24030725 gtttttattgggtattacttttaaaaaattataaacaagtgatatgta 24030772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 35547772 - 35547729
Alignment:
Q  114 agtgtttattaggtactactattaaaaaattataaataaatgat 157  Q
    |||||||||||  ||||||| |||||||||||||||||||||||    
T  35547772 agtgtttattaaatactactgttaaaaaattataaataaatgat 35547729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 40047063 - 40047118
Alignment:
Q  106 agtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    |||| |||||| | |||||||||||| |||||||||||||| || |||||||||||    
T  40047063 agtggttgagtatctattaggtactattattaaaaaattattaaaaaatgatgtgt 40047118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 44500493 - 44500628
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagaga-tctgagttagagtgattga 114  Q
    |||||||| |||||||||| ||||| ||||||  ||||||||||| ||||||  |||| |||| | ||  ||||| ||||  |||||||  || |||| |    
T  44500493 aatattaaaaaattgaaatgtaatgttataaaactattgatagttgattagtgaatctaatttgaaaaaattgtgtgagaggctgagtttcagggattaa 44500592  T
Q  115 gtgtttattaggtactactattaaaaaattataaat 150  Q
    ||| ||||||  ||||| |||||||| |||||||||    
T  44500593 gtgcttattaaatactattattaaaatattataaat 44500628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 51788932 - 51788881
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatga 156  Q
    |||||||||| ||||||| || ||||  ||||||||||||||||||||||||    
T  51788932 gagtgattgaatgtttataagttactgttattaaaaaattataaataaatga 51788881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 15839779 - 15839733
Alignment:
Q  34 tataatgatataaagttattgatagtttattagtagatctcatttaa 80  Q
    ||||||||||||||||||||||||| | |||| || |||||||||||    
T  15839779 tataatgatataaagttattgatagatgattaatatatctcatttaa 15839733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 32409579 - 32409633
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
    |||| ||||||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  32409579 gagtcattgagtctttaataggtacttttattaaaaaattataaataagtgatgt 32409633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 51655147 - 51655201
Alignment:
Q  36 taatgatataaagttattgatagtttattagtagatctcatttaagaactttgtg 90  Q
    |||||||||||| |||||||||||| |||||| | |||||||||| || ||||||    
T  51655147 taatgatataaaattattgatagttgattagttggtctcatttaataaatttgtg 51655201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 163
Target Start/End: Complemental strand, 51968094 - 51968064
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgtat 163  Q
    |||||||||||||||||||||||||||||||    
T  51968094 tattaaaaaattataaataaatgatgtgtat 51968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 6077931 - 6077898
Alignment:
Q  121 attaggtactactattaaaaaattataaataaat 154  Q
    ||||||||||| ||||||||||||||||||||||    
T  6077931 attaggtactattattaaaaaattataaataaat 6077898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 23928233 - 23928192
Alignment:
Q  120 tattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    |||||||||||| ||||||||||||||||| || ||||||||    
T  23928233 tattaggtactattattaaaaaattataaaaaagtgatgtgt 23928192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 148
Target Start/End: Original strand, 30865979 - 30866008
Alignment:
Q  119 ttattaggtactactattaaaaaattataa 148  Q
    ||||||||||||||||||||||||||||||    
T  30865979 ttattaggtactactattaaaaaattataa 30866008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 44516248 - 44516219
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||||||||||||||||||    
T  44516248 tattaaaaaattataaataaatgatgtgta 44516219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 5036083 - 5036047
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttat 52  Q
    |||||||| |||||||||| |||||||||||||||||    
T  5036083 aatattaaaaaattgaaatgtaatgatataaagttat 5036047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 25436027 - 25435963
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaa 80  Q
    |||||||  |||||||||| ||||| |||||||||||||||| |  |||||| |||| |||||||    
T  25436027 aatattataaaattgaaatgtaatgctataaagttattgataatggattagtcgatcccatttaa 25435963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 51175611 - 51175667
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    |||| |||||||  ||| ||||||||  |||||||||||||||||||| ||||||||    
T  51175611 gagtcattgagtccttaataggtacttttattaaaaaattataaataagtgatgtgt 51175667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 56397063 - 56397023
Alignment:
Q  138 aaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  56397063 aaaaattataaataagtgatgtgtatacgtaagatccattt 56397023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 13984038 - 13984200
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| || |||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||| ||||||| |||||||    
T  13984038 aatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtaggtctcatttaagaattttgtgtgagatctgggttagagagattgag 13984137  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |  ||||||| ||||||||||||||||||||||||   ||||||||||||||  |||||||||    
T  13984138 tacttattagatactactattaaaaaattataaatgtgtgatgtgtatgcgtgggacccattt 13984200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 47783777 - 47783615
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| |||| ||| |  ||||||||||||||||| ||||| |||||| |||||||||||    
T  47783777 aatattaaaaaattgaaatataatgatataaaattattgatagttgattaataggttccatttaagaactttgtgtgagatttgagttggagtgattgag 47783678  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||||||||  ||||| ||||||||||||||||| ||||||||||||  ||| ||||||||||    
T  47783677 tgtttattaaatactattattaaaaaattataaacaaatgatgtgtacacgtgagacccattt 47783615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 43822776 - 43822938
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| || |||||||||||||||||||||| |||||| | || ||||||||||||||||| |||||||| ||| |||  ||||||    
T  43822776 aatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttggaggaattgag 43822875  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    || ||||||| |||||||||||||||||||||||| | ||||||||| ||||  |||||||||    
T  43822876 tgcttattagatactactattaaaaaattataaatgagtgatgtgtacgcgtgggacccattt 43822938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 32451868 - 32451720
Alignment:
Q  29 tgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggta 128  Q
    ||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||| || |||||||||||| |||||||||| || ||||||||||    
T  32451868 tgaaatacaatgatataaagttattgataatttattagtgggtctcatttaagaacttt-tgtgagatctgagttggagtgattgaatgcttattaggta 32451770  T
Q  129 ctactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
     ||||||||||||||||||||| | |||||||||  ||| ||||||||||    
T  32451769 ttactattaaaaaattataaattagtgatgtgtaaacgtgagacccattt 32451720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 11120553 - 11120699
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||   |||||||||||||||| |||||||| ||| |||| ||||||    
T  11120553 aatattaa-aaattaaaatataatgatataaagttattgatagttgattagtggattgtatttaagaactttgtgtgagatctgcgttggagtaattgag 11120651  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    |||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  11120652 tgtttattagatactactattaaagaattataaatgagtgatgtgtat 11120699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 23333760 - 23333894
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||| ||||||||||||||||| || || |||   ||||||||||||||| |||| |||||||| ||| |||||||||||    
T  23333760 aatattaaaaaattgaaatataataatataaagttattgatatttgatcagtgagtctcatttaagaactgtgtgtgagatctgggttggagtgattgag 23333859  T
Q  116 tgtttattaggtactactattaaaaaattataaat 150  Q
    || |||||| |||||| ||||||||||||||||||    
T  23333860 tgcttattaagtactattattaaaaaattataaat 23333894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 32851883 - 32851727
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| || ||||||||| |||||||||||| ||||||   || ||||||||||||| ||| |||||||| | | |||  |||||     
T  32851883 aatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtgtgtcccatttaagaacttcgtgggagatctgggatggaggaattgat 32851784  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagac 172  Q
    || ||||||| |||||||||||||||||| ||||| | ||||||||| |||| ||||    
T  32851783 tgcttattagatactactattaaaaaattgtaaatgagtgatgtgtacgcgtgagac 32851727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 25813737 - 25813887
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||| || ||||||||| |||||||||||| |||||| | |||||||||||||||||| | |||||||| ||| ||| ||  |||    
T  25813737 aatattaa-aaatttaaatgtagtgatataaaattattgatagttgattagtgggtctcatttaagaactttgcgtgagatctgggttggagggaccgag 25813835  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgt 167  Q
    |  |||||| ||||| ||||||||||||||||||| | ||||||||| ||||    
T  25813836 tacttattatgtacttctattaaaaaattataaatgagtgatgtgtacgcgt 25813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 52353912 - 52353766
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| |||||| | |   ||||||||| |||||| ||||| |||  || ||| ||| ||    
T  52353912 aatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggttctatttaagaaatttgtgtgagatgctg-cttggagggatcga 52353814  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||| |||||||||||| ||||||||||||||||||| | |||||||||    
T  52353813 gtgcttattaggtactgctattaaaaaattataaattagtgatgtgta 52353766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 42831645 - 42831780
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| |||| |||||||||||| |||||||||||| |||| | ||||||||||||||| ||| || ||||| ||  ||| |||  ||| |    
T  42831645 aatattaaaaaattaaaatgtaatgatataaaattattgatagttgattaatggatctcatttaagaaatttttgtgagatgctaggttggaggaattta 42831744  T
Q  115 gtgtttattaggtactactattaaaaaattataaat 150  Q
    ||  ||||||||||||||||||||||||||||||||    
T  42831745 gttcttattaggtactactattaaaaaattataaat 42831780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 36166892 - 36167037
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    ||||| || ||||| |||| || |||||||||||||||||||||||||||||   ||  ||||||||| |||||| || || |  ||| |||  ||||||    
T  36166892 aatatgaaaaaattaaaatgtagtgatataaagttattgatagtttattagtgagtccaatttaagaattttgtgtgacatttaggttggaggaattgag 36166991  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |  |||||||||||||| |||||||||||||||||||||||||||||    
T  36166992 taattattaggtactac-attaaaaaattataaataaatgatgtgta 36167037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 11241603 - 11241439
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagaga-tctgagttagagtgattga 114  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||||| |||  | ||||| || |||||| || | | ||  || |||  ||||     
T  11241603 aatattataaaattgaaatataatgatataaagttattgatagttgattagtggataccttttaaaaaatttgtgtgaaattatggattggaggaattgg 11241504  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccatttt 179  Q
    |||||||||| |||||| |||||||||||||||||| | || ||||||| ||| ||| |||||||    
T  11241503 gtgtttattatgtactaatattaaaaaattataaatgagtggtgtgtatacgtgagatccatttt 11241439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 27544372 - 27544518
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| || ||||||| ||||||  |||||||| ||||| ||  ||| | | ||||||||||||||| ||||  ||||||| ||| ||| |||||||    
T  27544372 aatattaaaaagttgaaatgtaatgacttaaagttagtgataattgtttaatgggtctcatttaagaactgtgtgtcagatctgggttggagggattgag 27544471  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || ||||||| | ||| |||||||||||||||||| | |||||||||    
T  27544472 tgcttattagatgctattattaaaaaattataaatgagtgatgtgta 27544518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 51263190 - 51263323
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||| ||||||   | ||||||||||| |||||||||   |||| ||  | ||||||||    
T  51263190 aatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtttcatttaagaaatttgtgaga-tgctgaattgaaatgattgag 51263288  T
Q  116 tgtttattaggtactactattaaaaaattataaat 150  Q
    || | ||||||||||| |||| |||| ||||||||    
T  51263289 tgctcattaggtactattattgaaaatttataaat 51263323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 44665440 - 44665316
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| ||||||  || ||||||||||  |||||  ||||| |||  || ||| ||||||    
T  44665440 aatattaaaaaattgaaatataatgatataaaattattgatagttgattagtgtatttcatttaagagatttgtatgagatactggattggagcgattga 44665341  T
Q  115 gtgtttattaggtactactattaaa 139  Q
    ||  ||||||| || ||||||||||    
T  44665340 gtacttattagatattactattaaa 44665316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 38902048 - 38902126
Alignment:
Q  100 agttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||||| | |||| ||||  ||| ||||||||||    
T  38902048 agtttgagtgatcgagtgcttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagacccattt 38902126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 49003488 - 49003354
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||||  || ||||  ||||||||||||||||||| ||| || | ||| ||||||||| |||||| ||||| ||  ||| ||| ||||||    
T  49003488 aatattaaaaaattgttatgtaattgtataaagttattgatagttgatttgtgggtctaatttaagaattttgtgtgagatgctcggttggagagattga 49003389  T
Q  115 gtgtttattaggtactactattaaaaaattataaa 149  Q
     |  |||||||||| ||||||||||||||||||||    
T  49003388 atacttattaggtattactattaaaaaattataaa 49003354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 11570040 - 11569967
Alignment:
Q  17 atattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtg 90  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||| ||  |||||||| |||| ||||||    
T  11570040 atattaaaaaattgaaatgtaatgatataaagttattgatagttgattaataagtctcatttgagaaatttgtg 11569967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 37073759 - 37073808
Alignment:
Q  110 attgagtgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  37073759 attgagtgtttattagatactagtattaaaaaattataaataaatgatgt 37073808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 51061742 - 51061601
Alignment:
Q  19 attaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtg 117  Q
    ||||| |||||||||| |||||||| |||||||||||||||  |||||  | || |||||||||| ||||||  | || ||  ||| ||| ||||||||     
T  51061742 attaaaaaattgaaatgtaatgatagaaagttattgatagtagattagcgggtcccatttaagaaatttgtgtaaaatactaggttggagagattgagta 51061643  T
Q  118 tttattaggtactactatt-aaaaaattataaataaatgatg 158  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||    
T  51061642 tttattaagtactactattaaaaaaattatatataagtgatg 51061601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 3623157 - 3623108
Alignment:
Q  31 aaatataatgatataaagttattgatagtttattagtagatctcatttaa 80  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  3623157 aaatataatgatctaaagttattgatagttgattagtaaatctcatttaa 3623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 11567002 - 11566929
Alignment:
Q  17 atattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtg 90  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||| |||| ||  |||||||| |||| ||||||    
T  11567002 atattaaaaaaatgaaatgtaatgatataaagttattgatagttgattaataagtctcatttgagaaatttgtg 11566929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 9505607 - 9505527
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat 96  Q
    |||||||| ||||| | || |||| |||||||||||||||||||| |||||||| |||| |||||||| ||| || |||||    
T  9505607 aatattaaaaaatttatatgtaataatataaagttattgatagttgattagtaggtctcgtttaagaaatttatgcgagat 9505527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 40287109 - 40287000
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||| |||||||| ||  |||||||||||| |||||  | || ||||||| ||||||||| |||||||| ||| ||| |||| ||    
T  40287109 aatattaaaaaattaaaatgtaatgataaaa--ttattgatagttgattagcgggtcccatttaataactttgtgtgagatctgggttggagggatttag 40287012  T
Q  116 tgtttattaggt 127  Q
    || |||||||||    
T  40287011 tgcttattaggt 40287000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 23655205 - 23655162
Alignment:
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  23655205 tgtttattaagtactattattaaaaaattataaataaatgatgt 23655162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 36297983 - 36298034
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagt 67  Q
    |||||||| |||||||||| |||||||||||| |||||||||||| ||||||    
T  36297983 aatattaaaaaattgaaatgtaatgatataaaattattgatagttgattagt 36298034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 32913947 - 32914005
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||||||||||   |||||| ||||| ||||||||||||||||| |||||||||||||    
T  32913947 gagtgattgagtacctattagatactattattaaaaaattataaaaaaatgatgtgtat 32914005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 35988311 - 35988365
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||||||||| |||||||| || |||||||||||||||||||| |||| |||||    
T  35988311 gattgagtgttaattaggtaatattattaaaaaattataaataattgatttgtat 35988365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 38902007 - 38902052
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagttt 61  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||    
T  38902007 aatattaaaaaattaaaatataatgatataaagttattaatagttt 38902052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 14775277 - 14775153
Alignment:
Q  29 tgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatct-gagttagagtgattgagtgtttattaggt 127  Q
    |||||| |||||||| | |||||||||||| | | |  ||||| || |||||||  ||||||  |||| | || || ||| |||||||| |||||||| |    
T  14775277 tgaaatgtaatgatacagagttattgatagatgagtgatagatttcgtttaagagatttgtgtaagatattgaatttgagggattgagtatttattagtt 14775178  T
Q  128 actactattaaaaaattataaataa 152  Q
    |||||||||| ||||||||||||||    
T  14775177 actactattagaaaattataaataa 14775153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 24555866 - 24555822
Alignment:
Q  106 agtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||    
T  24555866 agtgattgaatgcttattagatactactattaaaaaattataaat 24555822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 43506267 - 43506403
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttatt 123  Q
    |||||||||| |||| |||||||||||||||||||| ||||||   ||  |||||| || |||||| || ||  |  ||| ||| ||||||||| ||| |    
T  43506267 aaattgaaatgtaataatataaagttattgatagttgattagtgagtcaaatttaataaatttgtgtgaaatgtttggttggagggattgagtgcttact 43506366  T
Q  124 aggtactactatt-aaaaaattataaataaatgatgt 159  Q
    | |||||| |||| |||||||||||||| ||||||||    
T  43506367 aagtactaatattaaaaaaattataaatgaatgatgt 43506403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 46487070 - 46487110
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattataaa 149  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  46487070 gattgagtgtttattaggtattattattaaaaaattataaa 46487110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 47364377 - 47364457
Alignment:
Q  71 tctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    ||||||||||||| |||||| ||||| || ||||  ||||||| ||| |||||||  |||||||||| |||||||||||||    
T  47364377 tctcatttaagaaatttgtgtgagatgctcagttgaagtgattaagtatttattatatactactatttaaaaattataaat 47364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 15726962 - 15726923
Alignment:
Q  121 attaggtactactattaaaaaattataaataaatgatgtg 160  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  15726962 attagatactactattaaaaaattataaataaattatgtg 15726923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 39864389 - 39864334
Alignment:
Q  109 gattgagtgtttattaggtactactattaa-aaaattataaataaatgatgtgtat 163  Q
    |||| ||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  39864389 gattaagtgtttattaggtacttctattaaaaaaattataaatgaatgatatgtat 39864334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 24555898 - 24555864
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagt 59  Q
    ||||||||||||||||||||||| |||||||||||    
T  24555898 aaattgaaatataatgatataaaattattgatagt 24555864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 641879 - 641831
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttatta 65  Q
    |||||||| ||||||| || ||||||||||||||||||||||||| ||||    
T  641879 aatattaa-aaattgatatgtaatgatataaagttattgatagttgatta 641831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 17349864 - 17349811
Alignment:
Q  110 attgagtgtttattaggtactactattaaaaaattat-aaataaatgatgtgta 162  Q
    |||||||| |||||||||| |  |||||||||||||| ||||||||||||||||    
T  17349864 attgagtgattattaggtattgatattaaaaaattataaaataaatgatgtgta 17349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 33041572 - 33041613
Alignment:
Q  122 ttaggtactactattaaaa-aattataaataaatgatgtgta 162  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  33041572 ttaggtactactactaaaaaaattataaataaatgatgtgta 33041613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 35839047 - 35839112
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtg 90  Q
    ||||||| |||| || |||||||||||||||||||| |||| || || | ||||||||| ||||||    
T  35839047 aaattgatatatgataatataaagttattgatagttaattaataaattttatttaagaaatttgtg 35839112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 37524214 - 37524181
Alignment:
Q  126 gtactactattaaaaaattataaataaatgatgt 159  Q
    ||||||||||||||||||||||||| ||||||||    
T  37524214 gtactactattaaaaaattataaatgaatgatgt 37524181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 38601085 - 38600938
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| |||| |||||||||||||||||||||| || |||||| | || ||||||| || |||||| ||||| ||   ||  || ||||||    
T  38601085 aatattaa-aaattaaaatgtaatgatataaagttattgataattgattagtgggtc-catttaaaaaatttgtgtgagatgcttgattgaagggattga 38600988  T
Q  115 gtgtttattaggtactactattaaaaa-attataaataaatgatgtgtat 163  Q
    ||  ||||||| || ||||||||||||  |||||||| | ||||||||||    
T  38600987 gtacttattagatattactattaaaaattttataaatgagtgatgtgtat 38600938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 42401089 - 42401146
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||| |||||| ||||||||||||  |||||||||||||||||  | |||||||||    
T  42401089 gagtgactgagtgcttattaggtactgttattaaaaaattataaaagagtgatgtgta 42401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 22680379 - 22680527
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||| | |||| |||||||||||| |||||| ||| | ||||   | || | ||| |||| |||||| |||||  |||||| ||| |||| |    
T  22680379 aatattaaaaaaatcaaatgtaatgatataaaattattggtagatgattaacggttcccgtttcagaaatttgtgtgagatattgagttggagggattaa 22680478  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    || |||||| ||||||||| |||||| | ||||||| | ||||||||||    
T  22680479 gtatttattcggtactacttttaaaatactataaatgagtgatgtgtat 22680527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 51504546 - 51504494
Alignment:
Q  126 gtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||||||||||||||||||||||||| | |||||| ||  ||| ||||||||||    
T  51504546 gtactactattaaaaaattataaatgagtgatgtatacacgtgagacccattt 51504494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 7e-44; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 32658549 - 32658387
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||| |||||| |||  ||||||||||||||||| ||||| || ||| |||||||| ||    
T  32658549 aatattaaaaaattaaaatatactgatataaagttattgatagttgattagtggattccatttaagaactttgtgtgagatatgggttggagtgatttag 32658450  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||   ||| ||||||||||    
T  32658449 tgtttattaggtactactattaaaaaattataaatgagtgatgtgtccacgtgagacccattt 32658387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 5002494 - 5002330
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||| | ||||||||||||||| |||||||||||||||||||| |||||| | || ||||||||||||||||| |||||||  ||| |||||||||||    
T  5002494 aatatttaaaaattgaaatataataatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctcggttggagtgattgag 5002395  T
Q  116 tgtttattaggtactact--attaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    || ||||||| |||||||  |  |||||||||||||||| |||||||||  ||||||||||||||    
T  5002394 tgcttattagatactactacaaaaaaaaattataaataagtgatgtgtacacgtaagacccattt 5002330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 22281887 - 22281763
Alignment:
Q  20 ttaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtt 119  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||  ||| ||||||||||||||||| ||||||   ||| ||||||||||||| |    
T  22281887 ttaaaaaattgaaatataatgatataaagttattgatggttgattagtgaatcccatttaagaactttgtgggagatcaaggttggagtgattgagtgct 22281788  T
Q  120 tattaggtactactattaaaaaatt 144  Q
    |||||||||||||||||||||||||    
T  22281787 tattaggtactactattaaaaaatt 22281763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 32977492 - 32977333
Alignment:
Q  20 ttaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtt 119  Q
    |||| |||||||||| || || ||||||||||||||||||| |||||| | || ||||||||||||||||| |||||||| ||| ||| ||||||||| |    
T  32977492 ttaaaaaattgaaatgtagtggtataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttggagggattgagtgct 32977393  T
Q  120 tattaggtactactattaa-aaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||||||||||||||||||| ||||| |||||| | ||||||||| ||||  |||||||||    
T  32977392 tattaggtactactattaaaaaaatcataaatgagtgatgtgtacgcgtgggacccattt 32977333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 33755768 - 33755876
Alignment:
Q  44 taaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactactattaaaaaat 143  Q
    ||||||||||||||||| |||||| ||| ||||||||||| |||||| ||||| || ||| |||||||||| |  |||||||||||||||||||||||||    
T  33755768 taaagttattgatagttgattagtggatttcatttaagaattttgtgtgagatttgtgttggagtgattgaatacttattaggtactactattaaaaaat 33755867  T
Q  144 tataaataa 152  Q
     ||||||||    
T  33755868 aataaataa 33755876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 7694047 - 7693887
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatc-tgagttagagtgattga 114  Q
    |||||||| |||||||||| || |||||| ||||||||||||||| |||||| | |  ||||||| || |||||| |||||  || ||| ||| ||||||    
T  7694047 aatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtgggttccatttaaaaaatttgtgtgagattatgggttggagggattga 7693948  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagaccca 175  Q
    ||  ||||||||||||| || ||||||||||||||| | |||||||||| ||| |||||||    
T  7693947 gtacttattaggtactattactaaaaaattataaatgagtgatgtgtatacgtgagaccca 7693887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 21941055 - 21940941
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||| | | ||||||||||||||||||||||||| |  | |||||||||  |||||| ||||| || ||| ||| |||||||    
T  21941055 aatattaaaaaattgaaatatagtaacataaagttattgatagtttattagtgggacccatttaagacttttgtgtgagatatgggttggagggattgag 21940956  T
Q  116 tgtttattaggtact 130  Q
    |||||||||||||||    
T  21940955 tgtttattaggtact 21940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 387740 - 387860
Alignment:
Q  31 aaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtg-attgagtgtttattaggtac 129  Q
    ||||||||| |||||||||||||||||||| |||||| | ||| ||||||||| |||||| || || |  | | || || ||||||||  ||| || |||    
T  387740 aaatataataatataaagttattgatagttgattagtgggtcttatttaagaaatttgtgtgaaatgttggattgaatgaattgagtgcctatcagatac 387839  T
Q  130 tactattaaaaaattataaat 150  Q
    |||||||||||||||||||||    
T  387840 tactattaaaaaattataaat 387860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 6988176 - 6988323
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgag-ttagagtgattga 114  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||  ||||||| | |||||||| || || ||  |||||   || ||| ||||||| |    
T  6988176 aatattaaaaaattaaaatgtgatgatataaaattattgatagttgtttagtaggtttcatttaaaaaatt-gtatgagatactagattaaagtgattaa 6988274  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    || |||||||||||| ||||||| ||||||||||| || | ||||||||    
T  6988275 gtttttattaggtaccactattataaaattataaacaagtaatgtgtat 6988323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 25099077 - 25099129
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagta 68  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  25099077 aatattaaaaaattaaaatataatgatataaaattattgatagttgattagta 25099129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 3705740 - 3705692
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgtatgcgt 167  Q
    ||||||||||||||||||||||||||  |||||| ||||||||| ||||    
T  3705740 ttattaggtactactattaaaaaattccaaataagtgatgtgtacgcgt 3705692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 18804300 - 18804248
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagta 68  Q
    |||||||| |||||||||| |||| ||||||| |||||||||||| |||||||    
T  18804300 aatattaataaattgaaatgtaataatataaaattattgatagttgattagta 18804248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 9491879 - 9491836
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagt 59  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  9491879 aatattaaaaaattaaaatgtaatgatataaagttattgatagt 9491836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 24072566 - 24072523
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||||||| || ||||||||||||||||| ||||||||||||    
T  24072566 ttattaggtattaatattaaaaaattataaagaaatgatgtgta 24072523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 3436058 - 3436014
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||||| || |||||||||||||||| |||| ||||||||||||    
T  3436058 ttattagatattactattaaaaaattacaaatgaatgatgtgtat 3436014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 19069600 - 19069640
Alignment:
Q  127 tactactattaaaaaattataaataaatgatgtgtatgcgt 167  Q
    ||||| |||||||||||||||||||| ||||||| ||||||    
T  19069600 tactaatattaaaaaattataaataattgatgtgcatgcgt 19069640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 2375548 - 2375684
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||| |||||| | || ||||||||||||||||| ||||| |||| | ||||||||||     
T  2375548 aatattaaaaaattaaaatataattatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatttgaggttgagtgattgaa 2375647  T
Q  116 tgtttattaggtactactattaaaaaattataaataa 152  Q
    |||||||||||||||||||||||||||||||||||||    
T  2375648 tgtttattaggtactactattaaaaaattataaataa 2375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 1309886 - 1309745
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| ||||||||||||||||| ||||||||| || ||||||  |||  |||||||||||||||| ||||| ||  || |||||||||||    
T  1309886 aatattaaaaaattaaaatataatgatataaaattattgataattgattagtgtatccaatttaagaactttgtgtgagatttggattggagtgattgag 1309787  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgat 157  Q
    || ||||||| ||||| |||||||||||||||||||||||||    
T  1309786 tgcttattagatactattattaaaaaattataaataaatgat 1309745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 13420832 - 13420670
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||||||   || ||||||| ||||||||| ||||||| |||| ||||||| |||    
T  13420832 aatattaaaaaattgaaatataattatataaagttattgatagttgattagtgagtcccatttaacaactttgtgtgagatctaagttggagtgatcgag 13420733  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgt-aagacccattt 178  Q
    || |||||| |||| ||||||| ||||||| |||||| |||||| ||| ||| |||||||||||    
T  13420732 tgattattaagtaccactatta-aaaattacaaataagtgatgtatatacgtgaagacccattt 13420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 18396642 - 18396480
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||  ||||||||||||||| |||||| ||| || | || |||||||||  |||||| ||||||  ||||||||  ||||||    
T  18396642 aatattaaaaaattgaaatattgtgatataaagttatttatagttgattggtgggtcccatttaagatttttgtgtgagatccaagttagaggaattgag 18396543  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    | |||||||||||||| |||||||||||||||||| |  |||||||| ||||  |||||||||    
T  18396542 tatttattaggtactattattaaaaaattataaatgagggatgtgtacgcgtgtgacccattt 18396480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 41520986 - 41520839
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||| ||| ||||||| || ||||| ||||||||||||||||||| ||| || | || |||||| |||||||||| ||||| ||| ||| ||| ||||||    
T  41520986 aatagtaaaaaattgatatgtaatggtataaagttattgatagttaatttgtgggtcccatttaggaactttgtgtgagatgctgggttggagggattga 41520887  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||  ||||||||||| |||||||||||||||||||||| |||||||||    
T  41520886 gttcttattaggtaccactattaaaaaattataaataagtgatgtgta 41520839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 26675603 - 26675457
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||| | | |||||||||||||||||||| || |||||| | ||| ||||||||| ||| || |||||||||||| ||  |||| ||    
T  26675603 aatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggattaag 26675504  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||| || |||||||||||||||||||||||| | |||||||||    
T  26675503 tgcttataagatactactattaaaaaattataaatgagtgatgtgta 26675457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 26947211 - 26947065
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||| | | |||||||||||||||||||| || |||||| | ||| ||||||||| ||| || |||||||||||| ||  |||| ||    
T  26947211 aatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggattaag 26947112  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||| || |||||||||||||||||||||||| | |||||||||    
T  26947111 tgcttataagatactactattaaaaaattataaatgagtgatgtgta 26947065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 13486584 - 13486693
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||||||||||||||||||||||||||| | |||||| | |  ||||||| |||||||||||||||||  ||| |||||||||||    
T  13486584 aatattaaaaaattgaaatataatgatataaagttattgatagctgattagtgggttccatttaaaaactttgtgagagatctaggttggagtgattgag 13486683  T
Q  116 tgtttattag 125  Q
    || |||||||    
T  13486684 tgcttattag 13486693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 42951856 - 42951756
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| || ||||||||| ||||||||| || |||||| | |||||||||||||||||||| |||||||||||| ||| |||||||    
T  42951856 aatattaaaaaattgaaatgtagtgatataaaattattgataattgattagtgggtctcatttaagaactttgtgtgagatctgagttggagggattgag 42951757  T
Q  116 t 116  Q
    |    
T  42951756 t 42951756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 7293046 - 7293208
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||||||   ||  |||||| ||||||||| ||||| || ||  ||| || |||     
T  7293046 aatattaaaaaattgaaatgtaatgatataatgttattgatagttaattagtgagtcctatttaaaaactttgtgtgagatttgggtcggagggaatgaa 7293145  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |  |||| ||||| ||||||||||||||||||||| ||||||||| | ||||  |||||||||    
T  7293146 tacttataaggtattactattaaaaaattataaatgaatgatgtgcacgcgtgggacccattt 7293208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 29558346 - 29558483
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttatt 123  Q
    ||||| |||| |||||||||||| |||||||||||| |||| ||||||| ||||||||| |||||| ||||| |||||||  || |||| |||| |||||    
T  29558346 aaattaaaatgtaatgatataaaattattgatagttgattattagatcttatttaagaaatttgtgtgagatgctgagttgaagagattaagtgcttatt 29558445  T
Q  124 aggtactactattaaaaaattataaataaatgatgtgta 162  Q
    | |||||| |||||||||||| ||||| | |||||||||    
T  29558446 a-gtactattattaaaaaattgtaaatgagtgatgtgta 29558483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 35463352 - 35463217
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttag-agtgattg 113  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||| |||  |  || ||||||||||| |||||| |||||  || ||| | |  |||||    
T  35463352 aatattaaaaaattgaaacataatgatataaaattattgatagttgatttatgaatttcatttaagaaatttgtgtgagatgttgggtttgaaaggattg 35463253  T
Q  114 agtgtttattaggtactactattaaaaaattataaa 149  Q
    |||  |||||||||||||||||||||||||||||||    
T  35463252 agtacttattaggtactactattaaaaaattataaa 35463217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 1666893 - 1666750
Alignment:
Q  19 attaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtg 117  Q
    ||||| ||||||| |||||| ||||||||||||||||||||| |||| |||||  |||||||||| || |||  | || ||| ||| ||| |||||||||    
T  1666893 attaaaaaattgagatataacgatataaagttattgatagttgattattagattccatttaagaaattcgtgtaaaatgctgggttggagagattgagtg 1666794  T
Q  118 tttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
     |||| | ||||||  | | ||||||||||| |||||||||||||    
T  1666793 cttataaagtacta-gagttaaaaattataagtaaatgatgtgta 1666750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 15468246 - 15468166
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat 96  Q
    |||||||| |||||||||| |||||||||||| |||||||||  | |||||| |||| |||||||||| |||||| |||||    
T  15468246 aatattaaaaaattgaaatttaatgatataaaattattgataaatgattagtggatcccatttaagaaatttgtgtgagat 15468166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 12593141 - 12593272
Alignment:
Q  31 aaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtact 130  Q
    |||| |||||||||||||||||||||| || |||||| | ||||||||||||| |||||  ||||  || |   | | || |||||  ||||||| ||||    
T  12593141 aaatgtaatgatataaagttattgataattgattagttggtctcatttaagaaatttgtttgagacgtggggatgggggaatgagtacttattagatact 12593240  T
Q  131 actattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||| |||||||| | |||||||||    
T  12593241 actattaaaaagttataaatgagtgatgtgta 12593272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 4432339 - 4432477
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttatt 123  Q
    |||||||||| |||| |||||||||||||||||| | || | |  |||||||||||||| ||| || ||||| ||| |||  || |||||| |  || ||    
T  4432339 aaattgaaatgtaattatataaagttattgatagctgatcaatgaatctcatttaagaaatttttgtgagatgctgcgtttaagggattgaattcttttt 4432438  T
Q  124 aggtactactattaaaaaattataaataaatgatgtgta 162  Q
    | ||| ||||||||||| ||||||||||||||| |||||    
T  4432439 aagtattactattaaaatattataaataaatgaggtgta 4432477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 33133346 - 33133237
Alignment:
Q  41 atataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggtactactattaaa 139  Q
    |||||||||||||||||||| ||||||   ||| ||||||||| |||||| ||||| ||||||| ||| ||||||||| ||| ||  || ||||||||||    
T  33133346 atataaagttattgatagttgattagtgagtcttatttaagaaatttgtgtgagatgctgagtttgagagattgagtgctta-taaatattactattaaa 33133248  T
Q  140 aaattataaat 150  Q
    || ||||||||    
T  33133247 aatttataaat 33133237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 11200736 - 11200872
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgag-ttagagtgattga 114  Q
    |||||||| ||||| | || |||| ||||||| |||||||||||| || | ||| ||| ||| ||||| |||||| ||||| | || ||||||  |||||    
T  11200736 aatattaaaaaattaatatgtaataatataaaattattgatagttgatcaataggtcttattcaagaattttgtgtgagatgttagattagaggaattga 11200835  T
Q  115 gtgtttattag--gtactactattaaaaaattataaa 149  Q
    |||||||||||  || |||| ||||||||||||||||    
T  11200836 gtgtttattaggagtgctacaattaaaaaattataaa 11200872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 20420169 - 20420221
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagta 68  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  20420169 aataataaaaaattgatatataatgatataaagttattgatagttgattagta 20420221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 42551145 - 42551057
Alignment:
Q  75 atttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||| |||||| ||||| ||  ||| ||| |||||| || |||||| |||||| |||||||||||||||||| |||||||||||    
T  42551145 atttaagaaatttgtgtgagatgctaggtttgagggattgattgcttattatgtactattattaaaaaattataaatgaatgatgtgta 42551057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 14642339 - 14642291
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttatta 65  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  14642339 aatattaa-aaattaaaatataatgatataaagttattgatagttgatta 14642291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 15958743 - 15958687
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    |||| ||||||| |||| |||||| |  |||||||||||||||||||||||||||||    
T  15958743 gagttattgagtctttaataggtaattttattaaaaaattataaataaatgatgtgt 15958687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 25324255 - 25324307
Alignment:
Q  110 attgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||| |||||| || ||||||||||||||||||||| |||||| ||||    
T  25324255 attgagtgtatattagatattactattaaaaaattataaatgaatgatttgta 25324307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 34382596 - 34382456
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| | ||| |||| |||||||||||| |||||||||| | |||| |||| ||  |||||||  | |||| ||| | ||| ||| ||| |||| |    
T  34382596 aatattaaaatattaaaatgtaatgatataaaattattgatagatgattaatagaccttgtttaagatatctgtgtgagttgctgggttggagagattaa 34382497  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatg 155  Q
    || ||||||| |||| ||| |||||||||||| ||||||||    
T  34382496 gtttttattatgtaccacttttaaaaaattattaataaatg 34382456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 2970393 - 2970350
Alignment:
Q  120 tattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||    
T  2970393 tattatgtactactattaaaaaattataaatgagtgatgtgtat 2970350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 8516933 - 8516874
Alignment:
Q  102 ttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    ||||||| |||||||  ||| || |||||  |||||||||||||||||||||||||||||    
T  8516933 ttagagtcattgagtccttaataagtacttttattaaaaaattataaataaatgatgtgt 8516874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 35982144 - 35982187
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagt 59  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||    
T  35982144 aatattaaaaaattgaaatataattatataaagttatttatagt 35982187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 4277432 - 4277376
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    ||||| ||||||  ||||||||||||| |||||||||||||| || || ||||||||    
T  4277432 gagtggttgagtagttattaggtactattattaaaaaattattaaaaagtgatgtgt 4277376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 11200498 - 11200546
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgtatgcgt 167  Q
    |||||||||| || |||||||||||||||||| | ||||||||| ||||    
T  11200498 ttattaggtattattattaaaaaattataaatgagtgatgtgtacgcgt 11200546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 31051458 - 31051398
Alignment:
Q  102 ttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||| ||||| | |||| ||| ||||  |||||||||||||||||||||| |||||||    
T  31051458 ttagagtcattgaatctttaatagatacttttattaaaaaattataaataaataatgtgta 31051398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 32080325 - 32080369
Alignment:
Q  110 attgagtgtttattaggtactactattaaaaaattataaataaat 154  Q
    ||||| |||||||||||||||| |||||||| |||| ||||||||    
T  32080325 attgaatgtttattaggtactattattaaaatattaaaaataaat 32080369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 35539609 - 35539736
Alignment:
Q  35 ataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactacta 134  Q
    |||| ||||||||||||||||||||| |||| | | || ||||||||||||||||| |||||||  ||| ||||||| ||||||||||||||||||||||    
T  35539609 ataacgatataaagttattgatagttgattaatgggtcccatttaagaactttgtgtgagatcttggttggagtgatcgagtgtttattaggtactacta 35539708  T
Q  135 ttaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||||||||||||||||    
T  35539709 ttaaaaaattataaataaatgatgtgta 35539736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 46006201 - 46006056
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||| | | ||  ||||||||||||||||  ||||||| ||| ||||||||||     
T  46006201 aatattaaaaaattaaaatataatgatataaagttattgatagttgattactgggtcaaatttaagaactttgtgtaagatctgggttggagtgattgaa 46006102  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||||||||||||||||||||||||||||||| | |||||||||    
T  46006101 tg-ttattaggtactactattaaaaaattataaatgagtgatgtgta 46006056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 36902447 - 36902318
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagtt-agagtgattga 114  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  || ||||||||||| |||||  |||||||||||| | ||| |||||    
T  36902447 aatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgaatttcatttaagaaatttgtttgagatctgagttgaaagt-attga 36902349  T
Q  115 gtgtttattaggtactactattaaaaaatta 145  Q
    || |||||||| || |||| |||||||||||    
T  36902348 gtatttattagatattactgttaaaaaatta 36902318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 13755251 - 13755130
Alignment:
Q  39 tgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactactattaa 138  Q
    |||||||||||||||||||||| |||  | | || |||||||||| |||||| |||  | | ||||||| ||||||||  |||||| |||||||||||||    
T  13755251 tgatataaagttattgatagttgatttttgggtcccatttaagaaatttgtgtgag--cagggttagagggattgagttcttattaagtactactattaa 13755154  T
Q  139 aaaattataaataaatgatgtgta 162  Q
    |||||||||||| | |||||||||    
T  13755153 aaaattataaatgagtgatgtgta 13755130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 13768652 - 13768531
Alignment:
Q  39 tgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactactattaa 138  Q
    |||||||||||||||||||||| ||| || | || |||||||||| ||||||  ||  | | ||||||| ||||||||  |||||| |||||||||||||    
T  13768652 tgatataaagttattgatagttgatttgtgggtcccatttaagaaatttgtgtaag--cagtgttagagggattgagttcttattaagtactactattaa 13768555  T
Q  139 aaaattataaataaatgatgtgta 162  Q
    |||||||||||| | |||||||||    
T  13768554 aaaattataaatgagtgatgtgta 13768531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 41211984 - 41212131
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgag-ttagagtgattga 114  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||| |||||||  |||||||||||||  ||||  ||||| |  | || ||| |||| |    
T  41211984 aatattaa-aaattaaaatgtaatgatataaagttattgatagttgattagtatgtctcatttaagaaacttgtatgagatgttcgattggagggattta 41212082  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
     || ||||||||||||||||||| |||||||||||| | | ||||||||    
T  41212083 ctgcttattaggtactactattacaaaattataaatgagttatgtgtat 41212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 36277889 - 36277737
Alignment:
Q  16 aatattaacaaattgaaat---ataatgatataaagttattgatagtttattagtagatctcattt-aagaactttgtgagagat-ctgagttagagtga 110  Q
    |||||||| ||||||||||   ||||||||||||||||||||||| ||||||||| | | | |||| || || |||||| ||||| ||||||| |||  |    
T  36277889 aatattaaaaaattgaaatgtaataatgatataaagttattgatattttattagtgggtttaatttaaaaaaatttgtgtgagatgctgagttggaggaa 36277790  T
Q  111 ttgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    |||| |  ||||||| || ||||||||||||||||||||| | || |||||||    
T  36277789 ttgaatacttattagatattactattaaaaaattataaattagtgctgtgtat 36277737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 45603562 - 45603396
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttatt---gatagtttattagtagatctcatttaagaactttgtgagagatct--gagttagagtga 110  Q
    |||||||| |||||||||| ||  |||||||||||| |   |||| || |||||| | || ||||||| || |||||| ||||| |  || ||| || ||    
T  45603562 aatattaaaaaattgaaatgtagggatataaagttaataatgatatttgattagtgggtcacatttaaaaaatttgtgtgagatgttggattta-aggga 45603464  T
Q  111 ttgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||||||||||| ||| |||| |||||    
T  45603463 ttgagtgtttattaagtactattattataaaattataaatgaatgatgtgtatacgtgagactcattt 45603396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 46048883 - 46049019
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagt-agatctcatttaagaactttgtgagagat-ctgagttagagtgattg 113  Q
    |||||||| ||||||  || ||||| ||||||||||||||||||| ||| || || || ||||||||||||||||| ||||| ||||||| ||| |||||    
T  46048883 aatattaaaaaattgttatgtaatggtataaagttattgatagttgatttgtgagttc-catttaagaactttgtgtgagatgctgagttggagggattg 46048981  T
Q  114 agtgtttattaggtactactatt-aaaaaattataaat 150  Q
      |  ||||||||||||| |||| ||||||||||||||    
T  46048982 gatacttattaggtactaatattaaaaaaattataaat 46049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 178
Target Start/End: Complemental strand, 49109167 - 49109019
Alignment:
Q  31 aaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggtac 129  Q
    |||| |||||||||||| ||||||||||||  ||||| |||  ||||||| || | |||  ||||| ||  ||| ||| ||||||||| |||||||||||    
T  49109167 aaatgtaatgatataaatttattgatagttggttagtggattccatttaaaaaatatgtatgagatgctcggtttgagagattgagtgcttattaggtac 49109068  T
Q  130 tactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||||| | |||| |||||||||||| || |||| |||| |||| |||||    
T  49109067 tactaatgaaaagttataaataaataatttgtacgcgtgagactcattt 49109019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 55272808 - 55272852
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtt 60  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  55272808 aatattaaaaaattgaaatataatgatataaagttattgatagtt 55272852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 55272857 - 55272904
Alignment:
Q  103 tagagtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  55272857 tagagtgattgagtgtttattatgtactattattaaaaaattataaat 55272904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 26085067 - 26085220
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| || |||   || |||||||||| ||| || || ||||| ||| ||| |||| ||    
T  26085067 aatattaaaaaattgaaatataatggtataaagttattgatggttgataagtgtgtcccatttaagaaatttatgtgaaatctgggttggagggattaag 26085166  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    | |||         ||| ||||||||||||||||| |||||||||||  ||| ||||||||||    
T  26085167 tattt---------tacaattaaaaaattataaatgaatgatgtgtacacgtgagacccattt 26085220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 33291033 - 33290924
Alignment:
Q  53 tgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactactattaaaaaattataaataa 152  Q
    |||||||| ||| || ||||||||||||||| |||||| || || |  ||| |||  ||| ||||| |||||||||||||| ||||||  ||||||||||    
T  33291033 tgatagttaattcgtggatctcatttaagaaatttgtgtgatatattggtttgaggtattaagtgtatattaggtactactgttaaaat-ttataaataa 33290935  T
Q  153 atgatgtgtat 163  Q
    |||||||||||    
T  33290934 atgatgtgtat 33290924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 52995776 - 52995702
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtg 90  Q
    |||||||| ||| | ||| |||||||||||||||||||||||||| |||||||  |||||||||| || ||||||    
T  52995776 aatattaaaaaaattaaagataatgatataaagttattgatagttgattagtatgtctcatttaacaaatttgtg 52995702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 52393728 - 52393785
Alignment:
Q  102 ttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
    ||||||||||||| |||||||||| || |  |||||||||||||||||||||||||||    
T  52393728 ttagagtgattgaatgtttattagatattgttattaaaaaattataaataaatgatgt 52393785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 40242214 - 40242167
Alignment:
Q  110 attgagtgtttattaggtactactattaaaaaattataaataaatgat 157  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  40242214 attgagtgcttattaggtattactattaaaaaattataaataagtgat 40242167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 29950820 - 29950766
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||| | ||||||    
T  29950820 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29950766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 29999974 - 29999920
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||| | ||||||    
T  29999974 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 30595203 - 30595071
Alignment:
Q  18 tattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagt 116  Q
    |||||| ||||| |||| |||||||||||| |||||||||||| ||||||   ||||||||||    ||| || || ||  |||||| ||| |||||| |    
T  30595203 tattaaaaaatttaaatgtaatgatataaaattattgatagttgattagtgagtctcatttaaattttttttgtgaaatgttgagttggagagattgaat 30595104  T
Q  117 gtttattaggtactactattaaaaaattataaa 149  Q
      ||||||| ||||| |||||||||||||||||    
T  30595103 tcttattagatactattattaaaaaattataaa 30595071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 54422727 - 54422838
Alignment:
Q  18 tattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagt 116  Q
    |||||| |||||||| | |||||||||||| ||||||||| || |||||| | ||||||||||||| |||| |  |||| ||  ||| ||| ||||||||    
T  54422727 tattaaaaaattgaa-tgtaatgatataaaattattgataattgattagtgggtctcatttaagaaatttgcgttagatactaggttggagagattgagt 54422825  T
Q  117 gtttattaggtac 129  Q
    |||| ||||||||    
T  54422826 gttttttaggtac 54422838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 54043544 - 54043493
Alignment:
Q  111 ttgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||    
T  54043544 ttgagtggttattagttactactattaaaaaattattgataaaagatgtgta 54043493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 163
Target Start/End: Complemental strand, 7325535 - 7325505
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgtat 163  Q
    |||||||||||||||||||||||||||||||    
T  7325535 tattaaaaaattataaataaatgatgtgtat 7325505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 40485126 - 40485072
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
    ||||| |||| || ||||||||||||| |||||||||||||||||  ||||||||    
T  40485126 gagtggttgaatgcttattaggtactattattaaaaaattataaaagaatgatgt 40485072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 44110931 - 44110977
Alignment:
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||| ||||||| ||||||||||||||||||||| ||| |||||||    
T  44110931 tgtttgttaggtaatactattaaaaaattataaatgaattatgtgta 44110977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 41211735 - 41211784
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttatta 65  Q
    |||||||| |||||||||  |||||||||||||||| ||||| |||||||    
T  41211735 aatattaaaaaattgaaacgtaatgatataaagttaatgataatttatta 41211784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 3973293 - 3973249
Alignment:
Q  106 agtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||    
T  3973293 agtgattgagtgtttactaagtattactattaaaaatttataaat 3973249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 3993811 - 3993855
Alignment:
Q  106 agtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||    
T  3993811 agtgattgagtgtttactaagtattactattaaaaatttataaat 3993855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 3996583 - 3996627
Alignment:
Q  106 agtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||    
T  3996583 agtgattgagtgtttactaagtattactattaaaaatttataaat 3996627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 4010122 - 4010166
Alignment:
Q  106 agtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||    
T  4010122 agtgattgagtgtttactaagtattactattaaaaatttataaat 4010166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 33832064 - 33831984
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat 96  Q
    |||||||| ||||| || | ||||||||| || |||||||||||| |||||| |||  |||| ||||| |||||| |||||    
T  33832064 aatattaaaaaattaaattgtaatgatatgaaattattgatagttgattagtggattccattaaagaaatttgtgtgagat 33831984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 36619273 - 36619321
Alignment:
Q  130 tactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||||||||||||||||||||| | |||||||||  ||| ||||||||||    
T  36619273 tactattaaaaaattataaatcagtgatgtgtacacgtgagacccattt 36619321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 55222597 - 55222653
Alignment:
Q  122 ttaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||| |||||||||||||||||||||||| | |||| ||||  ||| ||||||||||    
T  55222597 ttagatactactattaaaaaattataaatgactgatatgtacacgtgagacccattt 55222653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 43302242 - 43302108
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| | || |||||||||| | |||| |||||||   || |||||||||||    
T  43302242 aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaattatgtgtgagatctagattggagtgattgag 43302143  T
Q  116 tgtttattaggtactactattaaaaaattataaat 150  Q
    | |||||||||||||||||||||||||||||||||    
T  43302142 tatttattaggtactactattaaaaaattataaat 43302108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 36482130 - 36482001
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||||||||||| || ||||| |||||||||||||||    
T  36482130 aatattaaaaaattgaaatataattatataaagttattgatagttgattagtgaatctcatttaagaactttgtgtgatatctgggttagagtgattgag 36482031  T
Q  116 tgtttattaggtactactattaaaaaatta 145  Q
    || ||||||  |||||||||||||| ||||    
T  36482030 tgcttattaaatactactattaaaatatta 36482001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 36658012 - 36657878
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| | ||| |||||||||| |||||| |||||||||||| |||||| | || ||||||||||||||||| |||||||| ||| |||||||||||    
T  36658012 aatattaaaatattaaaatataatggtataaaattattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgag 36657913  T
Q  116 tgtttattaggtactactattaaaaaattataaat 150  Q
    || ||||||| || |||||||||||||||||||||    
T  36657912 tgcttattagatagtactattaaaaaattataaat 36657878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 31330394 - 31330542
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| |||||||||| |||||||||| | |||||||||||| |||||||  ||||||||||||| |||||| || ||  || ||| ||| ||||||    
T  31330394 aatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcatttaagaaatttgtgtgaaatgttgggttggagggattga 31330493  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||| |||||||||||||| ||||||||||||||||| | ||||||||||    
T  31330494 gtgcttattaggtactaccattaaaaaattataaatgagtgatgtgtat 31330542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 23156364 - 23156213
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||| || |||||||||||||||||||||| |||| | | |||||||||||||||||||| |||||||  ||| ||| |||| ||    
T  23156364 aatattaaaaaattaaaatgtagtgatataaagttattgatagttgattaatgggtctcatttaagaactttgtgtgagatctaggttggagggattaag 23156265  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgt 167  Q
    || ||||||| ||||||||||| |||| |||||||  |||||||||| ||||    
T  23156264 tgcttattagctactactattataaaactataaattgatgatgtgtacgcgt 23156213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 37698488 - 37698610
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||| || |||||||||||| |||||||||||||||| | | ||||||||||| |||||| ||||| || ||| ||| |||||||    
T  37698488 aatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcatttaagaattttgtgtgagatttgggttggagggattgag 37698587  T
Q  116 tgtttattaggtactactattaa 138  Q
    || ||||||||||||||||||||    
T  37698588 tgcttattaggtactactattaa 37698610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 4958238 - 4958388
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctga----gttagagtgat 111  Q
    |||||||| ||||||| || ||||||||||||||| ||||||||| ||| || | | |||||||||||  ||||| ||||| |      ||| ||| |||    
T  4958238 aatattaaaaaattgatatgtaatgatataaagttgttgatagttgatttgtgggtttcatttaagaaagttgtgtgagatgttgttcggttggagggat 4958337  T
Q  112 tgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  4958338 tgagtgtttattagatactactattaaaaaattataaatgaatgatgtgta 4958388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 36901161 - 36901033
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattg- 113  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||| ||||||||||||| ||| || ||||| ||  ||| ||| |||||     
T  36901161 aatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtctcatttaagaaatttttgtgagatactcggttggagggattga 36901062  T
Q  114 agtgtttattaggtactactattaaaaaa 142  Q
    | | |||||||||||||||||||||||||    
T  36901061 attctttattaggtactactattaaaaaa 36901033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 36656732 - 36656598
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||| || |||||||||||||||||| |||||| |||  | | |||||||||||||||||||  |||||   | || ||| |||||||    
T  36656732 aatattaaaaaattgatatgtaatgatataaagttattaatagttgatttatgggtctcatttaagaactttgtatgagatactaattggagggattgag 36656633  T
Q  116 tgtttattaggtactactattaaaaaattataaat 150  Q
    | |||||||| ||| ||||||||||||||||||||    
T  36656632 tatttattagataccactattaaaaaattataaat 36656598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 29914527 - 29914383
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| |||||||||| |||| |||||||||||||||||||| |||||    || |||||| ||| |||||| |||||  | |||| ||| |||| |    
T  29914527 aatattaaaaaattgaaatgtaataatataaagttattgatagttgattagcgagtcccatttatgaaatttgtgtgagatgttaagttggagggattaa 29914428  T
Q  115 gtgtttattaggtactactatta-aaaaattataaataaatgatg 158  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||    
T  29914427 gtgtttattaggtattactattataaaaattataaataagtgatg 29914383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 19987159 - 19987306
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||||  || ||||||| ||||||||||||||||  ||| |||| || ||||||||||||||||| |||||  || ||| ||| |||       
T  19987159 aatattaaaaaattgttatgtaatgatttaaagttattgatagtcgatttgtaggtcccatttaagaactttgtgtgagatgttgggttggagggatcat 19987258  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||  |||||| ||||||||||||||||||||||||| |||||||||||    
T  19987259 gtacttattatgtactactattaaaaaattataaatgaatgatgtgta 19987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 44441591 - 44441738
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| |||||||| | |||||||||  |||| ||||||||| |||||| | ||||||||||||| ||| || ||||| ||| ||| |||  |||||    
T  44441591 aatattaaaaaattgaagtgtaatgatatccagttgttgatagttgattagtgggtctcatttaagaaatttttgtgagatgctgggttggagatattga 44441690  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||  ||||||||||||||  |||||||||||||||| | |||||||||    
T  44441691 gttcttattaggtactaccgttaaaaaattataaatgagtgatgtgta 44441738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 48767281 - 48767131
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactt-tgtgagagat-ctgagttagagtgattg 113  Q
    |||| ||| ||||||||||  |||||||||||||||||||||||| |||||| | ||||||||||||| || | || ||||| ||  |||||||  ||||    
T  48767281 aataataaaaaattgaaatgcaatgatataaagttattgatagttgattagtgggtctcatttaagaaattatttgtgagatactaggttagaggtattg 48767182  T
Q  114 agt-gtttattaggtactactatt-aaaaaattataaataaatgatgtgta 162  Q
    ||| | |||||||||||||||||| |||||||||||||| | |||||||||    
T  48767181 agtggcttattaggtactactattaaaaaaattataaatgagtgatgtgta 48767131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 2008589 - 2008718
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| ||||| |||||| |||||||||||| ||||   | |  |||||||||| |||||| |||||||| ||||||| |||||||    
T  2008589 aatattaaaaaattgaaatgtaatggtataaaattattgatagttgattaacgggttccatttaagaaatttgtgtgagatctgggttagagggattgag 2008688  T
Q  116 t-gtttattaggtactactattaaaaaatt 144  Q
    |  ||||||| ||||||||| |||||||||    
T  2008689 tactttattaagtactactactaaaaaatt 2008718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 46282254 - 46282108
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||| | ||||| ||| ||||||||||||| |||||||||||| |||||| | ||||||||||||| ||||   ||||| ||| ||| ||| |||  |    
T  46282254 aatattcaaaaattaaaacataatgatataaaattattgatagttgattagtgggtctcatttaagaaatttgaatgagatgctg-gttggagggatcta 46282156  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||   ||||||||||||||||||| || ||||||||    
T  46282155 gtgtttattaggtatcgctattaaaaaattataaattaacgatgtgta 46282108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 39853769 - 39853849
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat 96  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |||||| | || |||||||||| ||| || |||||    
T  39853769 aatattaaaaaattgaaatataatggtataaagttattgatagttgattagtgggtcccatttaagaaatttttgtgagat 39853849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 47841546 - 47841411
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||||| || | ||| ||||||||||||||||||| ||| ||   ||||||||||||||||| || ||||| ||  ||| ||| ||||||    
T  47841546 aatattaaaaaattgatatgtgatggtataaagttattgatagttgatttgtgagtctcatttaagaactttatgtgagatgcttggttggagggattga 47841447  T
Q  115 gtgtttattaggtactactattaaaaaattataaat 150  Q
    ||  ||||||  ||||||||||| ||||||||||||    
T  47841446 gtacttattaaatactactattacaaaattataaat 47841411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 6068097 - 6068223
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||||||| |||||||| ||| |||||| ||||| |||||| ||| | |||||| || |||||  ||||||| ||||  ||  ||| ||    
T  6068097 aatattaaaaaattgaaatgtaatgatagaaaattattggtagttgattagtggattttatttaaaaaatttgtatgagatcttagttgaaggaattaag 6068196  T
Q  116 tgtttattaggtactactattaaaaaa 142  Q
    |  ||||||| ||||||||||||||||    
T  6068197 tacttattagatactactattaaaaaa 6068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 19594052 - 19594098
Alignment:
Q  19 attaacaaattgaaatataatgatataaagttattgatagtttatta 65  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  19594052 attaaaaaattgaaatataatgatataaagttattgatagttaatta 19594098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 38223975 - 38224124
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcattt--aagaactttgtgagagat-ctgagttagagtgatt 112  Q
    |||||||| ||||| | || ||||||||||| ||||||||||||| |||  |   ||||||||  |||||||||||  ||||| ||| |||  || ||||    
T  38223975 aatattaaaaaatttatatgtaatgatataatgttattgatagttgatttttgagtctcatttttaagaactttgtttgagatactgggttgaagggatt 38224074  T
Q  113 gagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||  |||||||||||||| || |||||||| ||||||||| |||||||    
T  38224075 gagtacttattaggtactaccatcaaaaaattctaaataaatcatgtgta 38224124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 46748063 - 46748009
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||||||  ||||||||| |||||||||||||||||||||||| ||||||||||    
T  46748063 gattgagttcttattaggtgctactattaaaaaattataaataagtgatgtgtat 46748009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 13057869 - 13057950
Alignment:
Q  16 aatattaacaaatt-gaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat 96  Q
    |||||||| ||||| ||||| | ||||||||||||||||||||||| |||||||  || |||||||||| |||||| |||||    
T  13057869 aatattaaaaaatttgaaatgttatgatataaagttattgatagttgattagtaagtcacatttaagaaatttgtgtgagat 13057950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 30859633 - 30859734
Alignment:
Q  77 ttaagaactttgtgagagatctgagttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccat 176  Q
    ||||||| ||| || |||||||| ||| |||  |||||||  ||||| |||||||||||||||||||||||||| | |||| | ||  ||||||||||||    
T  30859633 ttaagaaatttttgtgagatctgggttggaggaattgagtacttattgggtactactattaaaaaattataaatgagtgatatatacacgtaagacccat 30859732  T
Q  177 tt 178  Q
    ||    
T  30859733 tt 30859734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 5513971 - 5513823
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    ||||| || |||||||||| |||| |||||||||||||||| ||  ||||||   |||||||||| || |||| | ||||| | | ||| ||| ||||||    
T  5513971 aatataaaaaaattgaaatgtaattatataaagttattgatggtcgattagtgagtctcatttaaaaaatttgcgtgagatacggggttggagggattga 5513872  T
Q  115 gtgtttattaggtactactatt-aaaaaattataaataaatgatgtgta 162  Q
    |   ||||||| || ||||||| |||||||||||||||| |||||||||    
T  5513871 gaacttattagatattactattaaaaaaattataaataagtgatgtgta 5513823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 15018379 - 15018443
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaa 80  Q
    |||||| | ||||| |||| |||| ||||||||||||||||| || |||||||||||||||||||    
T  15018379 aatattcaaaaattaaaatgtaataatataaagttattgataattgattagtagatctcatttaa 15018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 25307607 - 25307463
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatct-gagttagagtgattga 114  Q
    |||||||| ||||||| || |||||||||||  |||||||| ||| ||| || ||||||||||||||| ||||||    || | |  |||||| ||||||    
T  25307607 aatattaaaaaattgagatgtaatgatataagtttattgattgttgatttgtggatctcatttaagaaatttgtgtcgaatgtaggtttagagagattga 25307508  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgt 159  Q
     || || |||| ||| ||||||||||||||||||| || ||||||    
T  25307507 atgcttgttagatacaactattaaaaaattataaaaaagtgatgt 25307463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 27334472 - 27334508
Alignment:
Q  116 tgtttattaggtactactattaaaaaattataaataa 152  Q
    |||||||||||||||||||||||||||||||||||||    
T  27334472 tgtttattaggtactactattaaaaaattataaataa 27334508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 36039055 - 36039106
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagt 67  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||| ||||||    
T  36039055 aatattaaaaaaatgaaatataatgatataaagttatcgatagttgattagt 36039106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 9429732 - 9429785
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||| | ||||||||||||||| ||||||||||||||||| |||| ||||||    
T  9429732 gattgaatatttattaggtactacaattaaaaaattataaatgaatgttgtgta 9429785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 29770850 - 29770797
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||||||||||  || ||||||||||||||| ||||||||||||||| ||||    
T  29770850 gattgagtgtttacaagttactactattaaaaatttataaataaatgatttgta 29770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 32724231 - 32724381
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattga---tagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgat 111  Q
    |||||||| ||||||| || ||||||||||||||||||||   ||||| |||||| | |  |||||||||| |||||  |||||  || ||| |||  ||    
T  32724231 aatattaaaaaattgatatgtaatgatataaagttattgatactagttaattagtgggttccatttaagaaatttgtttgagatgttgggttggagaaat 32724330  T
Q  112 tgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |  ||  |||||||| || |||||||||||||||||||| |||||| ||||    
T  32724331 ttggttcttattaggcaccactattaaaaaattataaatgaatgatatgta 32724381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 44441411 - 44441347
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaa 80  Q
    |||||||| ||||| |||| || |||||||||||||||||||||| |||||| | || |||||||    
T  44441411 aatattaaaaaattaaaatgtagtgatataaagttattgatagttgattagtgggtcccatttaa 44441347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 2888144 - 2888179
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagtta 51  Q
    |||||||| |||||||||||||||||||||||||||    
T  2888144 aatattaaaaaattgaaatataatgatataaagtta 2888179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 31322333 - 31322290
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||| |||||||||||||||| | |||||||||    
T  31322333 ttattaggtactactgttaaaaaattataaatgagtgatgtgta 31322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 43095509 - 43095560
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagt 67  Q
    |||||||| |||||||||||||||||||| ||||||| |||| || ||||||    
T  43095509 aatattaaaaaattgaaatataatgatatgaagttatcgataattaattagt 43095560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 4874990 - 4874941
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttatta 65  Q
    |||||| | ||||| |||| ||||||||||||||||||||||||| ||||    
T  4874990 aatatttaaaaattaaaatgtaatgatataaagttattgatagttgatta 4874941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 19735892 - 19735863
Alignment:
Q  133 tattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||||||||||||||||||    
T  19735892 tattaaaaaattataaataaatgatgtgta 19735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 23802257 - 23802216
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgata 57  Q
    |||||||| |||||||||| |||||||||||||| |||||||    
T  23802257 aatattaaaaaattgaaatgtaatgatataaagtaattgata 23802216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 38360815 - 38360778
Alignment:
Q  109 gattgagtgtttattaggtactactattaaaaaattat 146  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  38360815 gattgagtgcttattagatactactattaaaaaattat 38360778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 19753082 - 19753042
Alignment:
Q  19 attaacaaattgaaatataatgatataaagttattgatagt 59  Q
    ||||| |||||||||| |||||||||||| |||||||||||    
T  19753082 attaaaaaattgaaatgtaatgatataaaattattgatagt 19753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 43788614 - 43788670
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    |||| |||||||  ||| ||||||||  |||||||||||||||||||| ||||||||    
T  43788614 gagtcattgagtccttaataggtacttttattaaaaaattataaataagtgatgtgt 43788670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 9583151 - 9583284
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttatta 124  Q
    |||||||||||||||||| |||||||||||| | || |||||| | ||  |||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  9583151 aaattgaaatataatgatgtaaagttattgacaattgattagtgggtccaatttaagaactttgtgtgagatctgagtttgagtgattgagtgcttatta 9583250  T
Q  125 ggtactactattaaaaaattataaataaatgatg 158  Q
    | |||||||||||||||||||||||||| |||||    
T  9583251 gatactactattaaaaaattataaataagtgatg 9583284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 11921944 - 11922106
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||||  ||| ||||||||||||||||||| ||||| |||||||| || |||||||||| |||||| ||||| || ||| |||  ||||||    
T  11921944 aatattaaaaaattagaatctaatgatataaagttattggtagttgattagtaggtcccatttaagaaatttgtgtgagatttgggttggaggaattgag 11922043  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    || || ||||||||||||||||||||||||||||| | | |||||||  ||| ||||||||||    
T  11922044 tgctttttaggtactactattaaaaaattataaatgagtaatgtgtacacgtgagacccattt 11922106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 178
Target Start/End: Complemental strand, 6710986 - 6710833
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgtttatta 124  Q
    ||||| |||| ||||||||||||||||||||||||| |||| | |||   |||||||||||||||| |||||||  ||| |||||| |||||| ||||||    
T  6710986 aaattaaaatgtaatgatataaagttattgatagttgattaattgattctatttaagaactttgtgtgagatctaggttggagtgactgagtgcttatta 6710887  T
Q  125 ggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    | |||||||||||||||||||||||| | |||| ||||  ||| ||||||||||    
T  6710886 gatactactattaaaaaattataaatgagtgatctgtacacgtgagacccattt 6710833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 14773048 - 14772887
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||  | || ||||||||||||||||||| |||| |   || ||||||||||||||||| |||||||| ||| |||  ||||||    
T  14773048 aatattaaaaaattgaaatgcagtg-tataaagttattgatagttgattaatgagtcccatttaagaactttgtgtgagatctgtgttggaggaattgag 14772950  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |  ||||||||||||| | |||||||||||||||| ||||||||||| |||| ||||||||||    
T  14772949 tacttattaggtactattgttaaaaaattataaatgaatgatgtgtacgcgtgagacccattt 14772887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 26312471 - 26312617
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| |||| ||||| |||||| |||||||||||| ||||| |||||| | |   |||||| || |||||| |||||||||||| |||  ||||||    
T  26312471 aatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtgggttctatttaataaatttgtgtgagatctgagttggaggaattgag 26312570  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    || |||||||||||||||||||||||||||||||| | |||||||||    
T  26312571 tgcttattaggtactactattaaaaaattataaatgagtgatgtgta 26312617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 36887693 - 36887546
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagaga-tctgagttagagtgattga 114  Q
    |||||||| ||||||||||  ||||||||||| |||||||||||| |||||| ||||||||||||||| ||| || |||| |||| | |  || || |||    
T  36887693 aatattaaaaaattgaaatgcaatgatataaatttattgatagttgattagtggatctcatttaagaattttttgtgagactctgcgctgaagggactga 36887594  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||  ||||||| ||||| ||||||||| |||||||||| |||||||||    
T  36887593 gttattattagatactattattaaaaatttataaataagtgatgtgta 36887546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 34375050 - 34375194
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgag-ttagagtgattga 114  Q
    |||||||| |||||||||| |||| |||||||||||||||||||| |||| | | || |||||||||  ||| |||||  ||| || || ||| ||||||    
T  34375050 aatattaa-aaattgaaatgtaataatataaagttattgatagttgattaatgggtcccatttaagatttttttgaga--tcttaggttggagggattga 34375146  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
     |  |||||||||||||||||||||||||||||||||| |||||||||    
T  34375147 attcttattaggtactactattaaaaaattataaataagtgatgtgta 34375194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 65517 - 65383
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    ||||| || |||||||||| |||||||| ||| |||||||||||| |||| | | |||||||||| || |||||| |||||  ||  || ||| |||| |    
T  65517 aatataaaaaaattgaaatgtaatgatacaaacttattgatagttgattaatggttctcatttaataaatttgtgtgagatgttggattggagggattaa 65418  T
Q  115 gtgtttattaggtactactattaaaaaattataaa 149  Q
    |||||||||| ||||||| ||||||||||||||||    
T  65417 gtgtttattatgtactacaattaaaaaattataaa 65383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 18970010 - 18970120
Alignment:
Q  30 gaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattgagtgtttattaggta 128  Q
    ||||| |||| ||||||||||||| |||||| ||||||   | ||||||||||| |||||| ||||  |||||||  || ||||||||||||||||||||    
T  18970010 gaaatgtaattatataaagttattaatagttgattagtgagtttcatttaagaaatttgtgtgagaggctgagttgaagagattgagtgtttattaggta 18970109  T
Q  129 ctactattaaa 139  Q
    |||||||||||    
T  18970110 ctactattaaa 18970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 5038711 - 5038859
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagat--ctcatttaagaactttgtgagagat-ctgagttagagtgatt 112  Q
    |||||||| ||||| ||||||||| ||||||| |||||||||||| |||||| | |  | || ||||||| |||||| ||||| | | ||| ||| ||||    
T  5038711 aatattaaaaaattaaaatataataatataaaattattgatagttgattagtgggtcacacaattaagaaatttgtgtgagatgccgggttggagagatt 5038810  T
Q  113 gagtgtttattaggtactactattaaaaaattataaataaatgatgtgt 161  Q
    || || ||||||  ||||| |||||||||||||||||||||||| ||||    
T  5038811 gaatgcttattaattactattattaaaaaattataaataaatgaggtgt 5038859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 162
Target Start/End: Complemental strand, 37347944 - 37347814
Alignment:
Q  36 taatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat----ctgagttagagtgattgagtgtttattaggtacta 131  Q
    ||||| |||||||||||||| | || ||| |||| ||  |||||||||||||||| |||||    ||| ||| ||| |||||| |  ||||||| || ||    
T  37347944 taatggtataaagttattgacacttgatttgtaggtcatatttaagaactttgtgtgagatgatgctgggttggagggattgaattcttattagatatta 37347845  T
Q  132 ctattaaaaaattataaataaatgatgtgta 162  Q
    |||||||||||||||||||||||||||||||    
T  37347844 ctattaaaaaattataaataaatgatgtgta 37347814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 44887364 - 44887291
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgt 89  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| |||| | |||||||||||| || |||||    
T  44887364 aatattaaaaaattgaaatataatgatataaatttattgatagttgattattggatctcatttaaaaaatttgt 44887291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 3668838 - 3668973
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| |||  |||||||||||| |||| ||||||| |||||| | ||| ||||||||| |||||| || ||  |||||| ||  ||||||    
T  3668838 aatattaaaaaattaaaacgtaatgatataaaattatcgatagttaattagtggttcttatttaagaaatttgtgtgatatattgagttggacggattga 3668937  T
Q  115 gtgtttattaggtactactattaaaaaattataaat 150  Q
    ||  ||||||  ||||||||||||||||||||||||    
T  3668938 gtacttattaattactactattaaaaaattataaat 3668973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 32887726 - 32887588
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| |||| |||| ||||||||||||| |||||| |||||| ||| | |||||| || ||| || || |||||  || ||| ||||||     
T  32887726 aatattaaaaaattaaaatgtaataatataaagttatttatagttgattagtggat-ttatttaaaaaatttatgtgatatctggattggagagattgaa 32887628  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatg 155  Q
    || |||||||| || |||||||||||||||||||| ||||    
T  32887627 tgcttattaggcaccactattaaaaaattataaatgaatg 32887588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 41068905 - 41068777
Alignment:
Q  25 aaattgaaatataatgatataaagttattgatagttta-ttagtagatctcatttaagaactttgtgagagatctgagttagagtgattgagtgttta-t 122  Q
    |||||||||||||||||||||||||||||||||||| | ||||| | |||||||||| || ||||||       ||||  ||| |||||||||| ||| |    
T  41068905 aaattgaaatataatgatataaagttattgatagttgatttagt-ggtctcatttaaaaattttgtg-------tgagagagaatgattgagtgcttatt 41068814  T
Q  123 taggtactactattaaaaaattataaataaatgatgt 159  Q
    || ||||||||||| ||||||||||||| ||||||||    
T  41068813 taagtactactatttaaaaattataaatgaatgatgt 41068777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 40999678 - 40999752
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtg 90  Q
    |||||||| | |||||||||||||||||||||||||||||| ||| |||||| | |  |||||||||| ||||||    
T  40999678 aatattaaaagattgaaatataatgatataaagttattgatggttgattagtgggttccatttaagaaatttgtg 40999752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 4634046 - 4634103
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||  ||||||||||||| ||||||||||||||| | ||||||||||||    
T  4634046 gagtgattgagttcttattaggtactattattaaaaaattatacaaaaatgatgtgta 4634103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6459079 - 6459152
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgt 89  Q
    |||||||| ||||| ||||||||||||| ||| |||||||||||| |||||||  ||||||||| ||| |||||    
T  6459079 aatattaaaaaattaaaatataatgatagaaaattattgatagttgattagtaagtctcatttacgaaatttgt 6459152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 34234884 - 34234957
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgt 89  Q
    |||||||| |||||||||| |||||||||||||||||||||| || |||||| | ||| |||||| || |||||    
T  34234884 aatattaaaaaattgaaatgtaatgatataaagttattgataattgattagtgggtctaatttaataaatttgt 34234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 34821003 - 34820862
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| ||||| |||| |||||||||||||||| |||||||| |||  ||  |  | |||||||| |||||| || || ||||||| ||| |||| |    
T  34821003 aatattaaaaaattaaaatgtaatgatataaagttactgatagttgattgataagttccgtttaagaaatttgtgtgaaatgctgagttggagggattaa 34820904  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatga 156  Q
    ||||||| ||  || ||||||| ||||||||||||| |||||    
T  34820903 gtgtttaatatatattactatttaaaaattataaattaatga 34820862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 16118036 - 16117873
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagat-ctgagttagagtgattga 114  Q
    |||||||| |||| |  |||||||||||||||||||||||||||| ||| || |||  |||||| | | | |||| ||||| |   ||| |||  |||||    
T  16118036 aatattaaaaaatggttatataatgatataaagttattgatagttgatttgtggataccatttatggaatatgtgtgagatgcatggttggaggaattga 16117937  T
Q  115 gtgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    ||| |||||||||| |  |||||||||||||||||| | |||| ||||  ||| ||||||||||    
T  16117936 gtgcttattaggtattgatattaaaaaattataaatgagtgatatgtacacgtgagacccattt 16117873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 26297115 - 26297186
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaacttt 87  Q
    |||||||| |||||||||| |  |||||||||||||||||||||| ||||   |||| ||||||||||||||    
T  26297115 aatattaaaaaattgaaatgtggtgatataaagttattgatagttgattatcggatcccatttaagaacttt 26297186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 28857182 - 28857241
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    |||||| ||| ||||| ||||||||||||||||||| ||||||||  |||||||||||||    
T  28857182 ttattaagtattactactaaaaaattataaataaattatgtgtataagtaagacccattt 28857241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 45135762 - 45135855
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtga 110  Q
    ||||||||  || |||||||||||||||||||||||||||||||| ||| || | || ||||||| ||||||||  || ||||| ||| ||||||    
T  45135762 aatattaaataactgaaatataatgatataaagttattgatagttgatttgtgggtc-catttaaaaactttgtatgatatctgggttggagtga 45135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 6562942 - 6562985
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtt 60  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  6562942 aatattaa-aaattgaaatgtaatgatataaagttattgatagtt 6562985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 31050122 - 31050086
Alignment:
Q  126 gtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||||||||||||||||||| |||||||||    
T  31050122 gtactactattaaaaaattataaataagtgatgtgta 31050086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 44887109 - 44887065
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||    
T  44887109 ttattagatactattattaaaaaattataaataaatgatatgtat 44887065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 13022848 - 13022797
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagt 67  Q
    |||||||| |||||||||| |||| ||||||| |||||||||||| ||||||    
T  13022848 aatattaaaaaattgaaatgtaataatataaatttattgatagttgattagt 13022797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 44583488 - 44583421
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaa 83  Q
    |||||||| |||||||||| | |||||||||| |||| |||| || ||||||| || |||||||||||    
T  44583488 aatattaaaaaattgaaatgtgatgatataaatttatggatatttgattagtaaatttcatttaagaa 44583421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 3703493 - 3703436
Alignment:
Q  105 gagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||| |||||||  ||| ||||||||  |||||||| |||||||||||||||||||||    
T  3703493 gagtcattgagtccttaataggtacttttattaaaatattataaataaatgatgtgta 3703436  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 30465365 - 30465398
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataa 152  Q
    ||||||| ||||||||||||||||||||||||||    
T  30465365 ttattagatactactattaaaaaattataaataa 30465398  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 3949095 - 3949063
Alignment:
Q  25 aaattgaaatataatgatataaagttattgata 57  Q
    |||||||||| ||||||||||||||||||||||    
T  3949095 aaattgaaatgtaatgatataaagttattgata 3949063  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 34178333 - 34178269
Alignment:
Q  98 tgagttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||||||  |||||||||||| || |||||| |||||||||  |||||||||| || |||||    
T  34178333 tgagttagagaaattgagtgtttaataagtactattattaaaaagatataaataaaagaagtgta 34178269  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 41000007 - 41000051
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgtat 163  Q
    ||||||| |||| || |||||||| ||||||||||||||||||||    
T  41000007 ttattagatactgcttttaaaaaactataaataaatgatgtgtat 41000051  T

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Target: scaffold0017 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 31925 - 31764
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||| ||||||||| |||||||||||||| ||||| |||| |   ||  |||||||||||||||| || ||||| ||| |||| |||||     
T  31925 aatattaa-aaatttaaatataatcatataaagttattgttagttgattacttagtcctatttaagaactttgtgtgaaatctgggttggagtaattgaa 31827  T
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgtatgcgtaagacccattt 178  Q
    || ||||| | |||||||||||| ||||||||||| | ||||||| || | | ||||||||||    
T  31826 tgcttatttgatactactattaagaaattataaatgagtgatgtgaatacatgagacccattt 31764  T

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Target: scaffold0991 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 3006 - 2926
Alignment:
Q  17 atattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatc 97  Q
    ||||||| ||||||||||||||||||||||| |||||||||||  ||||||   ||  ||||||||| |||||||||||||    
T  3006 atattaaaaaattgaaatataatgatataaaattattgatagtggattagtgtgtcctatttaagaaatttgtgagagatc 2926  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 2195 - 2073
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtagatctcatttaagaactttgtgagagatctgagttagagtgattgag 115  Q
    |||||||| ||||||||||  | ||||||||||||||| |||||| ||||||  |||  |||||||||||||||| ||||||| ||||  || ||||||     
T  2195 aatattaa-aaattgaaattcagtgatataaagttattaatagttgattagtgaatcctatttaagaactttgtgtgagatctaagtttaagggattgaa 2097  T
Q  116 tgtttattaggtactactattaaa 139  Q
    |  ||||||| || ||||||||||    
T  2096 tacttattagctattactattaaa 2073  T

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Target: scaffold0036; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 63636 - 63685
Alignment:
Q  101 gttagagtgattgagtgtttattaggtactactattaaaaaattataaat 150  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  63636 gttagagagattgagtccttattaggtactactattaaaaaattataaat 63685  T

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Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 59700 - 59746
Alignment:
Q  116 tgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    |||||||||| || | |||||||||||||||||||||||||||||||    
T  59700 tgtttattagatattgctattaaaaaattataaataaatgatgtgta 59746  T

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Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 55798 - 55753
Alignment:
Q  119 ttattaggtactactattaaaaaattataaataaatgatgtgtatg 164  Q
    ||||||| ||||| |||||||||||||||||| | |||||||||||    
T  55798 ttattagctactaatattaaaaaattataaatgagtgatgtgtatg 55753  T

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Target: scaffold0712 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 6184 - 6131
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtag 69  Q
    |||||||| ||||||| ||||||| ||||||| |||||||||||| ||||||||    
T  6184 aatattaaaaaattgatatataataatataaaattattgatagttgattagtag 6131  T

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Target: scaffold0709 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 6202 - 6149
Alignment:
Q  16 aatattaacaaattgaaatataatgatataaagttattgatagtttattagtag 69  Q
    |||||||| ||||||| ||||||| ||||||| |||||||||||| ||||||||    
T  6202 aatattaaaaaattgatatataataatataaaattattgatagttgattagtag 6149  T

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Target: scaffold0528 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 1483 - 1543
Alignment:
Q  102 ttagagtgattgagtgtttattaggtactactattaaaaaattataaataaatgatgtgta 162  Q
    ||||||| ||||| | |||| ||| ||||  |||||||||||||||||||||| |||||||    
T  1483 ttagagtcattgaatctttaatagatacttttattaaaaaattataaataaataatgtgta 1543  T

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