View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14864_low_6 (Length: 453)
Name: NF14864_low_6
Description: NF14864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14864_low_6 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-150; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 152 - 453
Target Start/End: Complemental strand, 10983075 - 10982775
Alignment:
| Q |
152 |
cataaagaaatagtatcgctgagcacttttaaaataatttgtgtagaaaaggataattgtgcaaatatttatgaattaaaccacctatttattacaaaaa |
251 |
Q |
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| T |
10983075 |
cataaagaaatagtatcgctgagcacttttaaaataatttgtatggaaaaggataattgtgcaaatatttatgaattaaaccacctatttattacaaaaa |
10982976 |
T |
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| Q |
252 |
caaataaattaaaggagcccaatttatccgaatcacaatttcaacaccattttattcataaattttattttatgagacaacaaaacaacttatgataagg |
351 |
Q |
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| T |
10982975 |
caaataaattaaaggagcccaatttatccgaatcacaatttcaccaccattttattcataaattttattttatgagacaacaaaacaacttatgataagg |
10982876 |
T |
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| Q |
352 |
gccaacaaaacccatatcatataaaaaagttatattatgttacttctaattctgcttccacaacttagccaacttattcaaagcgacatgggcacttcca |
451 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| |
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| T |
10982875 |
gccaacaaaacccatatcatata-aaaagttatattatgttacttctaattctgcttccacaactgagccaacttattcaaagcgacaagggaacttcca |
10982777 |
T |
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| Q |
452 |
cc |
453 |
Q |
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|| |
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| T |
10982776 |
cc |
10982775 |
T |
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