View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14866_high_15 (Length: 236)
Name: NF14866_high_15
Description: NF14866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14866_high_15 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 9887482 - 9887643
Alignment:
| Q |
16 |
aaggatgaagaacctaccatttctgatctcaaccatctcaagtaaagaagatagtcatacctaaagacccaaagaattgatttctagtaccttaattaac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9887482 |
aaggatgaagaacctaccatttctgatctcaaccatctcaagtaaagaagatagtcatacctaaagacccaaagaattgatttctagtaccttaattaac |
9887581 |
T |
|
| Q |
116 |
catgaaagtaatgatggtattcaaatcctattttgtgcctcacttcttgatgtaataatgta |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
9887582 |
catgaaagtaatgatggtattcaaatcctattttgtgcctcacttcttgatgtcataatgta |
9887643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University