View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14866_high_6 (Length: 380)
Name: NF14866_high_6
Description: NF14866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14866_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 18 - 355
Target Start/End: Original strand, 3422902 - 3423239
Alignment:
| Q |
18 |
atcatggaagaagattctccaaagaaagttttcaactcctccaacaattcagatatcacaccaaaatgtgtccttccaagtccaatatcatcatatactt |
117 |
Q |
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| T |
3422902 |
atcatggaagaagattctccaaagaaagttttcaactcctccaacaattcagatatcacaccaaaatgtgtccttccaagtccaatatcatcatatactt |
3423001 |
T |
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| Q |
118 |
caacactttggtctctaagaattcaagctgttggaaagctaaaaccgattgatttaaagcgcttatcttaccatatgtcaccacaattgattgaaagaca |
217 |
Q |
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| T |
3423002 |
caacactttggtctctaagaattcaagctgttggaaagctaaaaccgattgatttaaagcgcttatcttaccatatgtcaccacaattgattgaaagaca |
3423101 |
T |
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| Q |
218 |
agaaaataagatagaaaaagaaccaactacagacaaggaaaaggatcacaaagttgaaaatcatgaaaatgactcaataaaggatctagtttttgactta |
317 |
Q |
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| T |
3423102 |
agaaaataagatagaaaaagaactaactaaagacaaggaaaaggatcacaaagttgaaaatcatgaaaatgactcaataaaggatctagtttttgactta |
3423201 |
T |
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| Q |
318 |
gacacaattcagaaatgggacaaaacaatgccgctgcc |
355 |
Q |
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|||||||| |||||| ||||||||||||||||||||| |
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| T |
3423202 |
aacacaattgagaaattggacaaaacaatgccgctgcc |
3423239 |
T |
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