View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14867_low_4 (Length: 543)

Name: NF14867_low_4
Description: NF14867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14867_low_4
NF14867_low_4
[»] chr7 (13 HSPs)
chr7 (7-529)||(18326180-18326691)
chr7 (9-471)||(16839049-16839490)
chr7 (337-534)||(18322643-18322840)
chr7 (9-405)||(16846198-16846573)
chr7 (250-527)||(22037261-22037527)
chr7 (178-456)||(22021495-22021768)
chr7 (330-450)||(22028877-22028997)
chr7 (9-124)||(22021353-22021468)
chr7 (9-127)||(22028589-22028707)
chr7 (330-462)||(22011112-22011242)
chr7 (243-482)||(22040118-22040347)
chr7 (52-127)||(22039950-22040025)
chr7 (9-124)||(22037047-22037162)
[»] chr3 (1 HSPs)
chr3 (249-421)||(3866063-3866239)
[»] chr5 (3 HSPs)
chr5 (381-450)||(3233932-3234001)
chr5 (359-427)||(3228764-3228832)
chr5 (9-107)||(29647637-29647735)
[»] chr2 (4 HSPs)
chr2 (9-123)||(10205439-10205553)
chr2 (54-107)||(554482-554535)
chr2 (254-304)||(10205276-10205326)
chr2 (54-103)||(5436836-5436885)
[»] chr4 (1 HSPs)
chr4 (45-107)||(53774837-53774899)


Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 7 - 529
Target Start/End: Original strand, 18326180 - 18326691
Alignment:
Q  7 gctggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattactt 106  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18326180 gctggattgcctttgtttttctcatgttgtcaagaaagctcatttagttatatggcaaatgacacattacggagttgaagagtcttggagtcaattactt 18326279  T
Q  107 acgataaatcttcaaattatggcacatcatggagttgaacattatggcttggagaaatattttgattctcaatggttgcaattgcacctttctagaaatt 206  Q
    | ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18326280 aagataaatcttcaaattatgacacattatggagttgaacattatggcttggagaaatattttgattctcaatggttgccattgcacctttctagaaatt 18326379  T
Q  207 atgattcattggtattgataaaaaatcttaatgagctaccacttgtctataatttgagagatgatagtgtagagagaattagaatcatcaatggtaaacg 306  Q
    |||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18326380 atgattcattggtattgataaacaatcttgatgacctaccagttgtctataatttgagagatgatagtgtagagagaattagaattatcaatggtaaacg 18326479  T
Q  307 ttggtggagctataacaagaattattatgctgaaagcttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcc 406  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||            
T  18326480 ttgctggcgctataacaagaattattatgctgaaagcttggttctgtgtcgatgaaagtaagttcctcttcgaggatttatttgaatttctg-------- 18326571  T
Q  407 tttatgttgtgtgattattttatacgatggcttttatttgattactttggatattagtaacggtttgacaatctcttgatcgactgaatttcttattgct 506  Q
     || | |||||||||||||||||  ||| ||||||||||||||| ||||| |||| ||||||||||||||||||||  || || |||||||||| |||||    
T  18326572 -ttgtattgtgtgattattttatttgatagcttttatttgattattttggctattggtaacggtttgacaatctctccattgaatgaatttctt-ttgct 18326669  T
Q  507 tttatatttaaggtaattcaccc 529  Q
    ||||||||| |||||||||||||    
T  18326670 tttatattt-aggtaattcaccc 18326691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 9 - 471
Target Start/End: Complemental strand, 16839490 - 16839049
Alignment:
Q  9 tggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattacttac 108  Q
    |||| |||||||| ||||||||| |||| |||||| ||||| | ||||||||| | |||||| ||||||||||| |||||||||||| |||||||| ||     
T  16839490 tggactgcctttgtttttctcatgttgttaagaaaactcatcttgttatatggaagatgacagattatggagttcaagagtcttggactcaattacgtag 16839391  T
Q  109 gataaatcttcaaattatggcacatcatggagttgaacattatggcttggagaaatattttgattctcaatggttgcaattgcacctttctagaaattat 208  Q
    |||| ||||||||||||| |                  |||||  |||||||||| | ||| ||||||  ||||||| |||||||||||||| |||||||    
T  16839390 gatagatcttcaaattatag------------------attataacttggagaaaaaatttcattctcggtggttgccattgcacctttctaaaaattat 16839309  T
Q  209 gattcattggtattgataaaaaatcttaatgagctaccacttgtctataatttgagagatgatagtgtagagagaattagaatcatcaatggtaaacgtt 308  Q
    ||| || | |||||   |||  ||  | | || || ||  ||||||||||||||| |||| |||||||| |||||| |||||| ||||||||| |||| |    
T  16839308 gatgcactcgtattagcaaacgattctgaagaactgccggttgtctataatttgatagatcatagtgtaaagagaactagaattatcaatggtgaacgct 16839209  T
Q  309 ggtggagctataacaagaattattatgctgaaagcttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctt 408  Q
    |||||  ||||| |||||| ||||   |||||||||||||| | ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| |     
T  16839208 ggtggcactatatcaagaactatt---ctgaaagcttggttttatgtgaatgaaagtaagttcctcttccacgatttatttgaatttccgttaattcttg 16839112  T
Q  409 tatgttgtgtgattattttatacgatggcttttatttgattactttggatattagtaacggtt 471  Q
    |||||||| |||||||   | | ||||| |||||||| |||| ||||| || | |||||||||    
T  16839111 tatgttgtttgattataacacatgatgggttttattttattattttggttactggtaacggtt 16839049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 337 - 534
Target Start/End: Original strand, 18322643 - 18322840
Alignment:
Q  337 tgaaagcttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctttatgttgtgtgattattttatacgatgg 436  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||| || |||||||||||||||||| | |||||||| ||||||| ||||| |||||    
T  18322643 tgaaagcttggttttgtgtcattgaaagtaagttcctcttcgatgatatacttgaatttctgttaattcttatatgttgtttgattatgttatatgatgg 18322742  T
Q  437 cttttatttgattactttggatattagtaacggtttgacaatctcttgatcgactgaatttcttattgcttttatatttaaggtaattcacccgaaaa 534  Q
     |||||||| |||| ||||| ||||  |||| |||||||||| |||  ||| | ||| |||||||||||||||||||| |||||||||||||| ||||    
T  18322743 attttattttattattttggctattgttaactgtttgacaatttctcaatcaaatgattttcttattgcttttatattcaaggtaattcaccctaaaa 18322840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 9 - 405
Target Start/End: Complemental strand, 16846573 - 16846198
Alignment:
Q  9 tggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattacttac 108  Q
    |||| |||||||| ||||||||| |||||||| || ||||| | ||||||||| | |||||| ||||||||||| |||||||||||| |||||||| ||     
T  16846573 tggactgcctttgtttttctcatgttgtcaagcaaactcatcttgttatatggaagatgacagattatggagttcaagagtcttggactcaattacgtag 16846474  T
Q  109 gataaatcttcaaattatggcacatcatggagttgaacattatggcttggagaaatattttgattctcaatggttgcaattgcacctttctagaaattat 208  Q
    |||| ||||||||||||| |                  |||||  |||||||||| | ||| ||||||  ||||||| |||||||||||||| |||||||    
T  16846473 gatagatcttcaaattatag------------------attataacttggagaaaaaatttcattctcggtggttgccattgcacctttctaaaaattat 16846392  T
Q  209 gattcattggtattgataaaaaatcttaatgagctaccacttgtctataatttgagagatgatagtgtagagagaattagaatcatcaatggtaaacgtt 308  Q
    ||| || | ||| |   |||  ||  | | || || ||| ||||||||||||||| |||| |||||||| |||||| |||||| ||||||||| |||| |    
T  16846391 gatgcactcgtagtagcaaacgattctgaagaactgccagttgtctataatttgatagatcatagtgtaaagagaactagaattatcaatggtgaacgct 16846292  T
Q  309 ggtggagctataacaagaattattatgctgaaagcttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattc 405  Q
    |||||  ||||| |||||| ||||   |||||||||||||| ||| ||| |||||||||||||||||||   ||||| |||||||| | ||||||||    
T  16846291 ggtggcactatatcaagaactatt---ctgaaagcttggttttgtttcattgaaagtaagttcctcttcattgatttctttgaattgccgttaattc 16846198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 250 - 527
Target Start/End: Original strand, 22037261 - 22037527
Alignment:
Q  250 tgtctataatttgagagatgatagtgtagagagaattagaatcatcaatggtaaacgttggtggagctataacaagaattattatgctgaaagcttggtt 349  Q
    |||||||||||||||||||| |||  |||||| || |||||| | ||||||  || | | ||||| ||||| |||   | |||||| |||||||||||||    
T  22037261 tgtctataatttgagagatggtagcatagagaaaactagaattaccaatggggaaagctcgtggatctatatcaa---tgattatgttgaaagcttggtt 22037357  T
Q  350 ctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctttatgttgtgtgattattttatacgatggcttttatttgatt 449  Q
     | ||||| ||||||||||| ||||||| |  ||||||||||||||||||||||||     |||| || ||||| ||||||  ||||||||||||| |||    
T  22037358 ttctgtcattgaaagtaagtccctcttcaa--atttatttgaatttctgttaattc----ttgttctgggattaatttatataatggcttttatttaatt 22037451  T
Q  450 actttggatattagtaacggtttgacaatctcttgatcgactgaatttcttattgcttttatatttaaggtaattcac 527  Q
    | ||||| || | | ||| ||||||| ||||||  || || |||||||||| ||||||||||||||||||||||||||    
T  22037452 attttggctaatggaaacagtttgac-atctctccattgaatgaatttctt-ttgcttttatatttaaggtaattcac 22037527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 456
Target Start/End: Original strand, 22021495 - 22021768
Alignment:
Q  178 atggttgcaattgcacctttctagaaattatgattcattggtattgataaaaaatcttaatgagctaccacttgtctataatttgagagatgatagtgta 277  Q
    |||| ||| ||||||||| |||| |||||||||| || || |||||  ||| ||  || ||||  || || |||| |||||||||||||||| ||||||     
T  22021495 atgggtgccattgcacctctctaaaaattatgatacactgatattggaaaacaaggttgatgatgtaacagttgtatataatttgagagatggtagtgtt 22021594  T
Q  278 gagagaattagaatcatcaatggtaaacgttggtggagctataacaagaattattatgctgaaagcttggttctgtgtcaatgaaagtaagttcctcttc 377  Q
    |||| || || ||| | ||||||| || | | ||||| ||||| |||||| |||   | ||||||||||||| ||||||| ||||||||||||||||||     
T  22021595 gagaaaactataattaccaatggtgaatgctcgtggatctatatcaagaaatat---gttgaaagcttggttttgtgtcattgaaagtaagttcctcttt 22021691  T
Q  378 gaggatttatttgaatttctgttaattcctttatgttgtgtgattattttatacgatggcttttatttgattactttgg 456  Q
     |  |||||||| | ||||||||||||| |  ||||| ||||| ||||||||| ||| |||||||  |||||| |||||    
T  22021692 ca--atttattttattttctgttaattcttgaatgttatgtgactattttatatgatagcttttacatgattattttgg 22021768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 450
Target Start/End: Original strand, 22028877 - 22028997
Alignment:
Q  330 attatgctgaaagcttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctttatgttgtgtgattattttat 429  Q
    |||||| ||||||| | ||| ||||||| |||||||||||||||||| |  |||||||||||||||||||| |||| |  ||||||||||| |||||| |    
T  22028877 attatgttgaaagcctagttttgtgtcattgaaagtaagttcctctttgtcgatttatttgaatttctgtttattcttccatgttgtgtgactattttct 22028976  T
Q  430 acgatggcttttatttgatta 450  Q
    | | |||||||||||||||||    
T  22028977 atggtggcttttatttgatta 22028997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 22021353 - 22021468
Alignment:
Q  9 tggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattacttac 108  Q
    |||||||| |||| ||||||||| |||| |||||| | ||||| ||||||||||| ||||   |||||||||||||||| ||||||| |||||||||||     
T  22021353 tggattgcatttgtttttctcatcttgtgaagaaaacccatttggttatatggcagatgatggattatggagttgaagaatcttggactcaattacttaa 22021452  T
Q  109 gataaatcttcaaatt 124  Q
     || ||||||||||||    
T  22021453 aatcaatcttcaaatt 22021468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 22028589 - 22028707
Alignment:
Q  9 tggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattacttac 108  Q
    ||||||||||||| |||||| |  | |||||| || | ||||| ||||||||| |||||||  |||||||||||||||||||||||| |||||||||||     
T  22028589 tggattgcctttgtttttctgaagtggtcaaggaaacccattttgttatatggaaaatgacggattatggagttgaagagtcttggactcaattacttaa 22028688  T
Q  109 gataaatcttcaaattatg 127  Q
    ||| | | |||||||||||    
T  22028689 gattagttttcaaattatg 22028707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 462
Target Start/End: Original strand, 22011112 - 22011242
Alignment:
Q  330 attatgctgaaagcttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctttatgttgtgtgattattttat 429  Q
    |||||| ||||||||| ||| ||||||| ||||||||||||||||||  |  |||||||| ||||||||||||||| | |||||| ||| |||||||| |    
T  22011112 attatgttgaaagcttagttttgtgtcattgaaagtaagttcctctttaa--atttattttaatttctgttaattcttgtatgttatgttattattttct 22011209  T
Q  430 acgatggcttttatttgattactttggatatta 462  Q
    | ||||  |||||| |||||| ||||| |||||    
T  22011210 atgatgaattttatatgattattttggctatta 22011242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 243 - 482
Target Start/End: Original strand, 22040118 - 22040347
Alignment:
Q  243 taccacttgtctataatttgagagatgatagtgtagagagaattagaatcatcaatggtaaacgttggtggagctataacaagaattattatgctgaaag 342  Q
    ||||| || |||||||||||||||||| ||| ||||||||||||||||| | ||||| | || | |   ||| ||||| |   ||| | |||| ||||||    
T  22040118 taccagttttctataatttgagagatggtagcgtagagagaattagaattaccaatgctgaatgctcaaggatctatatc---aatgactatgttgaaag 22040214  T
Q  343 cttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctttatgttgtgtgattattttatacgatggctttta 442  Q
    ||||||| ||||||| ||||||||||| || |||  |  |||||||| ||||||||||| |||     ||||   ||||||||||||| |||||||||||    
T  22040215 cttggttttgtgtcattgaaagtaagtgccgctttaa--atttattttaatttctgttagttc----ttgttcaatgattattttatatgatggctttta 22040308  T
Q  443 tttgattactttggatattagtaacggtttgacaatctct 482  Q
    |||||||| |||||  ||| ||| | ||||||||||||||    
T  22040309 tttgatta-tttggcaattggtaccagtttgacaatctct 22040347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 22039950 - 22040025
Alignment:
Q  52 agttatatggcaaatgacacattatggagttgaagagtcttggagtcaattacttacgataaatcttcaaattatg 127  Q
    |||| ||||| | |||||| |||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||    
T  22039950 agttttatggaagatgacagattatggagttgaagagtcttggactcaattacttaagattaattttcaaattatg 22040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 22037047 - 22037162
Alignment:
Q  9 tggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattacttac 108  Q
    |||||||| |||| ||||||||| ||||||||||| | ||||| ||||||||| | ||||   ||||||||| ||| || ||||||| |||||||||       
T  22037047 tggattgcatttgtttttctcatcttgtcaagaaaacccatttggttatatggaagatgatggattatggagatgatgattcttggactcaattactcga 22037146  T
Q  109 gataaatcttcaaatt 124  Q
    ||| ||||||||||||    
T  22037147 gattaatcttcaaatt 22037162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 421
Target Start/End: Original strand, 3866063 - 3866239
Alignment:
Q  249 ttgtctataatttgagagatgatagtgtagagagaattagaatcatcaatggtaaa-------cgttggtggagctataacaagaattattatgctgaaa 341  Q
    ||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||       || ||||||  ||||| ||| || ||||   ||||||    
T  3866063 ttgtctatattttgagagatgatagtgtagagagaactagaattatcaatggtcaatggttaacgctggtggcactatatcaataactatt---ctgaaa 3866159  T
Q  342 gcttggttctgtgtcaatgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctttatgttgtgtgat 421  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||  |||||||| | |||||||| ||||    
T  3866160 gcttggttctgtgtcattgaaagtaagttcctcttcgacgatttatttgaattttcgttaattcttgtatgttgtttgat 3866239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 450
Target Start/End: Complemental strand, 3234001 - 3233932
Alignment:
Q  381 gatttatttgaatttctgttaattcctttatgttgtgtgattattttatacgatggcttttatttgatta 450  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||    
T  3234001 gatttatttgaatttctgttaattcttgtatgttgtgtgattattttctatgatggattttatatgatta 3233932  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 3228832 - 3228764
Alignment:
Q  359 tgaaagtaagttcctcttcgaggatttatttgaatttctgttaattcctttatgttgtgtgattatttt 427  Q
    |||||||| ||||||||| || |||||||||||||||| |||||||| | |||  ||||||||||||||    
T  3228832 tgaaagtatgttcctctttgacgatttatttgaatttccgttaattcttgtatactgtgtgattatttt 3228764  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 29647637 - 29647735
Alignment:
Q  9 tggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattactta 107  Q
    ||||||||||||| ||||||||   | | |||||| ||||||| |||||||||||||||| | | | |||| ||||| | ||||||| |||||| ||||    
T  29647637 tggattgcctttgtttttctcaccatcttaagaaaactcattttgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattcctta 29647735  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 10205553 - 10205439
Alignment:
Q  9 tggattgcctttgcttttctcattttgtcaagaaagctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattacttac 108  Q
    |||||| |||||| |||| | || |||| |||||| ||||||| ||||||||| | |||||  | ||||| |||||||||||||||| |||| || |||     
T  10205553 tggatttcctttgtttttttaatgttgttaagaaaactcattttgttatatggaagatgactgagtatggtgttgaagagtcttggactcaactagttaa 10205454  T
Q  109 gataaatcttcaaat 123  Q
    ||| |||||||||||    
T  10205453 gattaatcttcaaat 10205439  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 554482 - 554535
Alignment:
Q  54 ttatatggcaaatgacacattatggagttgaagagtcttggagtcaattactta 107  Q
    ||||||||||||||| | | ||||||||| |||||||||||| |||||||||||    
T  554482 ttatatggcaaatgatagaatatggagttaaagagtcttggactcaattactta 554535  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10205326 - 10205276
Alignment:
Q  254 tataatttgagagatgatagtgtagagagaattagaatcatcaatggtaaa 304  Q
    |||||||||||||||||||||||||||||  ||||||| | ||| ||||||    
T  10205326 tataatttgagagatgatagtgtagagagcgttagaataaccaacggtaaa 10205276  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 5436885 - 5436836
Alignment:
Q  54 ttatatggcaaatgacacattatggagttgaagagtcttggagtcaatta 103  Q
    |||||||||| |||||| | ||||||||||| |||||||||| |||||||    
T  5436885 ttatatggcagatgacaaaatatggagttgaggagtcttggaatcaatta 5436836  T

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Target: chr4 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 53774837 - 53774899
Alignment:
Q  45 ctcatttagttatatggcaaatgacacattatggagttgaagagtcttggagtcaattactta 107  Q
    ||||||| ||||||||||||||||   | | |||||||||||||||||||| |||||| ||||    
T  53774837 ctcattttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattcctta 53774899  T

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