View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14867_low_7 (Length: 255)
Name: NF14867_low_7
Description: NF14867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14867_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 6886109 - 6885870
Alignment:
| Q |
1 |
atataatcattgatattgtatcaattatcaaacaactcaaattatattagtaataaataaattttaaacaatttcaacaattcatttttatatgacgacc |
100 |
Q |
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| T |
6886109 |
atataatcattgattttgtatcaattatcaaacaactcaaattatattactaataaataaattttaaacaatttcaaccattcatttttatatgacgacc |
6886010 |
T |
|
| Q |
101 |
aagatttatataattccaaatttagaccatacttnnnnnnntcagaggccaatgaaagtaatataatgattgaaggaaagtgaaaaatgagaggtataat |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6886009 |
aagatttatataattccaaatttagaccatacttaaaaaaatcagaggccaatgaaagtaatataatgattgaaggaaagtgaaaaatgagaggtataat |
6885910 |
T |
|
| Q |
201 |
attgaagatatgaatgtgtaagggaaacgaggtcctatat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
6885909 |
attgaagatatgaatgtgtaagggaaacgaggtcctatat |
6885870 |
T |
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