View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14867_low_9 (Length: 217)
Name: NF14867_low_9
Description: NF14867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14867_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 43887403 - 43887194
Alignment:
| Q |
1 |
tagatctggcggtggtgctaccggcgttcatcaccaacggcaatactccgagaatttcctcgacagcgccaccactggaaaccgttggcttcaatccgct |
100 |
Q |
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| T |
43887403 |
tagatctggcggtggtgctaccggcgttcatcaccaacggcaatactccgagaatttcctcgacggcgccaccactggaaaccgttggcttcaatccgct |
43887304 |
T |
|
| Q |
101 |
ggacttcaacatcttcaatcctccgctgcaaatcctcttcaggttcgtttcatcagttttctcattctcgatattcgagacgatcttgtgaagttaatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43887303 |
ggacttcaacatcttcaatcctccgctgcaaatcctcttcaggttcgtttcatcagttttctcattctcgatattcgagacgatcttgtgaagttaatga |
43887204 |
T |
|
| Q |
201 |
tcattttgat |
210 |
Q |
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|||||||||| |
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| T |
43887203 |
tcattttgat |
43887194 |
T |
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