View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14868_high_14 (Length: 245)
Name: NF14868_high_14
Description: NF14868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14868_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 40706854 - 40706604
Alignment:
| Q |
1 |
tatgagcaatccaaatcaaatttataattttgttagaagagtaagaaacaaggccagtcactttttggcttgagcccaattgttcatggtttaacacctc |
100 |
Q |
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| T |
40706854 |
tatgagcaatccaaatcaaatttataattttgttagaagagtaagaaacaaggccagtcactttttggcttgagcccaattgttcatggtttaacacctc |
40706755 |
T |
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| Q |
101 |
tacttgtatatttcctcatt-----------tgggttaactttgtcttctaataaaagtactaaggaatgaaattttcacacacacaaaattggataatt |
189 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40706754 |
tacttgtatatttcctcatttgtttgctgtgtgggttaactttgtcttctaataaaagtactaaggaatgaaattttcacacacacaaaattggataatt |
40706655 |
T |
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| Q |
190 |
ttttctttggggtacatgtacttacctttgggtgattctagtcatattttt |
240 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
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| T |
40706654 |
ttttctttggggtacatgtacttacttttgggtgattctagtcattttttt |
40706604 |
T |
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