View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14868_low_11 (Length: 310)
Name: NF14868_low_11
Description: NF14868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14868_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 297
Target Start/End: Original strand, 10596521 - 10596802
Alignment:
| Q |
16 |
atgaatgatgccaaagagaatgtgacnnnnnnngactctaactcgatgagtaaacgacaatcaacatctccgcctaagggatccaagttacctcctgttt |
115 |
Q |
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| T |
10596521 |
atgaatgatgccaaagagaatgtgacaaaaaaagactctaactcgatgagtaaacgacgaccaacatctccgcctaagggatccaagttacctcctgttt |
10596620 |
T |
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| Q |
116 |
gtctgagagttgatccattgccaaggaagaaaaatggaaatggaagttcaaggtctccaagtccacctgcttcaaaagaacactcgaaagcaacatctgt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
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| T |
10596621 |
gtctgagagttgatccattgccaaggaagaaaaatggaaatgggagttcaaggtctccaagtccacctgcttcaaaagaacacttgaaagcaacatcttt |
10596720 |
T |
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| Q |
216 |
tgaatcaaagaacattcctttgagagacatcaaagacaggattgaaccaaattcaaatggtaagagtgcatcaaaggctagt |
297 |
Q |
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|| |||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||||| |
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| T |
10596721 |
tggatcaaagaacattcctttgagagacatcaaagacaggactgaaccaaattcagatagtaagagtgcaccaaaggctagt |
10596802 |
T |
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