View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14868_low_12 (Length: 301)
Name: NF14868_low_12
Description: NF14868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14868_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 286
Target Start/End: Original strand, 40706905 - 40707170
Alignment:
| Q |
21 |
ttatgacctaactcccgatcgtttaaattagaaagttacgatctgatccacatcaacaatacaacagattcaagttatgagacagttcagaagttacaac |
120 |
Q |
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| T |
40706905 |
ttatgacctaactcccgatcgtttaaattaaaaagttacgatctgatccatatcaacaatacaacagattcaagttatgagacagttcatgagttacaac |
40707004 |
T |
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| Q |
121 |
ccgatccaagatcaggacctaactcccgatccatactagaacccttgagaaacacataagttttggaagaaaaagtttacaagaaaaattgtactcttga |
220 |
Q |
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| T |
40707005 |
ccgatccaagatcaggacctaactcccgatccatactagaacccttgggaaacacataagttttggaagaaaaagtttacaagaaaaattgtactcttga |
40707104 |
T |
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| Q |
221 |
aatggactcatttatggaaaactatcatagaaaacttataatgaccgaagtgtaattcattgttaa |
286 |
Q |
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| T |
40707105 |
aatggactcatttatggaaaactatcatagaaaacttataatgaccgaagtgtaattcattgttaa |
40707170 |
T |
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Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 40797423 - 40797373
Alignment:
| Q |
212 |
tactcttgaaatggactcatttatggaaaactatcatagaaaacttataat |
262 |
Q |
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| T |
40797423 |
tactcttgaaacgggctcatttgttgaaaactatcatagataacttataat |
40797373 |
T |
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