View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14869_high_12 (Length: 344)
Name: NF14869_high_12
Description: NF14869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14869_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 327
Target Start/End: Original strand, 35255481 - 35255798
Alignment:
| Q |
10 |
aagaaaatccgcataagaaccctcccggcactaacccctaatatgaaatgatacatataaaaaagaagaataaaaatcagcaccaaaccattgcgatcga |
109 |
Q |
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| T |
35255481 |
aagaatatccgcataagaatcctcccggcactaacccctaatatgaaatgatacatataaaaaagaagaataaaaatcagcaccaaaccattgtgatcga |
35255580 |
T |
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| Q |
110 |
tatagttattctttacactaatctatgaattaaattaactaccaatgatttgatggtgattacacacattaaacgaattaaaaacagaatttttgttaaa |
209 |
Q |
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| T |
35255581 |
tatagttattctttccactaatctatgaattaaattaactaccaatgatttgatggtgattacacacattaaacaaattaaaaacagaatttttgttaaa |
35255680 |
T |
|
| Q |
210 |
tagtccaagaatagcatgccagcaccttgatttcatcacttagctccatttgtcatgtttcttagaggttgtaggagatgaaacacaaccctctattcca |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35255681 |
tagtccaagaatagcatgccagcaccttgatttcatcacttagctccatttgtcatgtttcttagaggttgtaggagatgaaacacaaccctctattcca |
35255780 |
T |
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| Q |
310 |
atcacaaaaaacaattca |
327 |
Q |
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|||||||||||||||||| |
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| T |
35255781 |
atcacaaaaaacaattca |
35255798 |
T |
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