View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14869_high_18 (Length: 256)
Name: NF14869_high_18
Description: NF14869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14869_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 31442399 - 31442175
Alignment:
| Q |
4 |
aattattccctccattttagtataactatccttcacttttagtataagagatttttctccctccactttcttcaaataattaaaccaaacaactcaaata |
103 |
Q |
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| T |
31442399 |
aattattccctccattttagtataactatccttcacttttagcataagagatttttctccctccactttcttcaaataattaaaccaaacaactcaaata |
31442300 |
T |
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| Q |
104 |
cgaaataagaattcacctctcttccacttcctttctacctaaaataacttactaacaaccaatctttattgatgtcattttgataccgaggaaagttgaa |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |
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| T |
31442299 |
cgaaataagaattcacctctcttccacttcctttctacctaaaataatttactaacaaccaatgttta-----------ttgataccgaggaaagttgaa |
31442211 |
T |
|
| Q |
204 |
ctcatgatctcctcaatagataattccaacccttgt |
239 |
Q |
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|||||||| ||||||||||||||||||||||||||| |
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| T |
31442210 |
ctcatgatttcctcaatagataattccaacccttgt |
31442175 |
T |
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