View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14869_high_8 (Length: 413)
Name: NF14869_high_8
Description: NF14869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14869_high_8 |
 |  |
|
| [»] chr4 (21 HSPs) |
 |  |
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Alignment Details
Target: chr4 (Bit Score: 387; Significance: 0; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 11 - 413
Target Start/End: Original strand, 2471820 - 2472222
Alignment:
| Q |
11 |
tcaatttcttcatcttttcagacagagctcgcaatccatcttcaggaatattgaaggcacggtaggagagatggggcgatttgatgtatgaattagggaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2471820 |
tcaatttcttcatcttttcagacagagctcgcaatccatcttcaggaatattggaggcacggtaggagagatggagcgatttgatgtatgaattagggaa |
2471919 |
T |
 |
| Q |
111 |
agtggaaagacggagcgatttgatgtctgataaattagggaaagtggagatttcaacaagaagggcatcgaggtcaattctttcggaaaagagagagatg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2471920 |
agtggaaagacggagcgatttgatgtctgataaattagggaaagtggagatttcaacaagaagggcatcgaggtcaattctttcggaaaagagagagatg |
2472019 |
T |
 |
| Q |
211 |
tcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatgg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2472020 |
tcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcagagacgattggtgatgg |
2472119 |
T |
 |
| Q |
311 |
agaaaaactgtttggagaccatggaaagagatttgaaagtctggttgttgtcgtcgaggaatttgaagatgctctcccatatttcctctggtaaacttga |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2472120 |
agaaaaactgtttggagaccatggaaagagatttgaaagtctggttgttgtcgtcaaggaatttgaagatgctctcccatatttcctctggtaaacttga |
2472219 |
T |
 |
| Q |
411 |
acc |
413 |
Q |
| |
|
||| |
|
|
| T |
2472220 |
acc |
2472222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 204 - 405
Target Start/End: Original strand, 2460515 - 2460719
Alignment:
| Q |
204 |
agagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacag---tagattgtgagggagaatcggagacga |
300 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||| |||| | || |||||||||| |||| | | | | |||| |||| ||||||||||||||| |
|
|
| T |
2460515 |
agagatgtcgagagaggttaggttaggaaacctttgaaagatgagacgaaggaaaggaattgctctatcggttttgattttgagagagaatcggagacga |
2460614 |
T |
 |
| Q |
301 |
ttggtgatggagaaaaactgtttggagaccatggaaagagatttgaaagtctggttgttgtcgtcgaggaatttgaagatgctctcccatatttcctctg |
400 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2460615 |
ttggtgatggagaggaactgtttggagaccatggagagagatttgaaagtgtggtggttgtcgtcgaggaatttgaagatgctctcccatatttcctctg |
2460714 |
T |
 |
| Q |
401 |
gtaaa |
405 |
Q |
| |
|
||||| |
|
|
| T |
2460715 |
gtaaa |
2460719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 2367813 - 2367678
Alignment:
| Q |
205 |
gagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattgg |
304 |
Q |
| |
|
|||| |||||| || |||||||| |||||||||| ||| ||| ||| ||||||||||||||||| | | | |||| | ||||||||||||||| |||| |
|
|
| T |
2367813 |
gagaagtcgagggatgtgaggttggggaacctttggaaaaggcgataaaggaaagggattgttttatcggacattgctatggagaatcggagacggttgg |
2367714 |
T |
 |
| Q |
305 |
tgatggagaaaaactgtttggagaccatggaaagag |
340 |
Q |
| |
|
||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
2367713 |
tgatggagagaaattgtttggagacgatggaaagag |
2367678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 12124764 - 12124881
Alignment:
| Q |
223 |
aggttagggaacctttcgaagaggtgatgaaggaaagggattgtttca-cagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgt |
321 |
Q |
| |
|
||||| |||||||||| ||||||| | | ||||||||||||||||||| ||| |||||| || ||| ||| ||||||| ||||||||||||| ||| ||| |
|
|
| T |
12124764 |
aggttggggaacctttggaagaggcggtcaaggaaagggattgtttcatcag-agattgcgatggaaaattggagacggttggtgatggagagaaattgt |
12124862 |
T |
 |
| Q |
322 |
ttggagaccatggaaagag |
340 |
Q |
| |
|
|||||||| ||||| |||| |
|
|
| T |
12124863 |
ttggagacaatggagagag |
12124881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 205 - 326
Target Start/End: Complemental strand, 2373376 - 2373256
Alignment:
| Q |
205 |
gagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattgg |
304 |
Q |
| |
|
|||| |||||| ||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||| | | | |||| | ||||||||||||| |||||| |
|
|
| T |
2373376 |
gagaggtcgagggaggtgaggttggggaacctttggaagaggcgattaaggaaaggaattgttttatcg-acattgctatggagaatcggagatgattgg |
2373278 |
T |
 |
| Q |
305 |
tgatggagaaaaactgtttgga |
326 |
Q |
| |
|
||||||||| ||| |||||||| |
|
|
| T |
2373277 |
tgatggagagaaattgtttgga |
2373256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 2621277 - 2621177
Alignment:
| Q |
226 |
ttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttgg |
325 |
Q |
| |
|
||||||||||| ||||||||| || ||| ||||||||| |||| | | ||||||||| |||||| || ||||| ||||||||||| ||||||||||||| |
|
|
| T |
2621277 |
ttagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttgg |
2621178 |
T |
 |
| Q |
326 |
a |
326 |
Q |
| |
|
| |
|
|
| T |
2621177 |
a |
2621177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 349
Target Start/End: Original strand, 2547459 - 2547598
Alignment:
| Q |
210 |
gtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatg |
309 |
Q |
| |
|
|||||| || |||| |||||||||||||| ||||| |||| ||||| || |||| | | || | ||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
2547459 |
gtcgagtgatgtgatgttagggaacctttggaagaagtgaggaagggaaaggatgatatgactggagattgtgactgagaaccggagacggttggtgatg |
2547558 |
T |
 |
| Q |
310 |
gagaaaaactgtttggagaccatggaaagagatttgaaag |
349 |
Q |
| |
|
|| | ||||||||||||||| ||||| || ||||| |||| |
|
|
| T |
2547559 |
gacagaaactgtttggagacgatggagagcgattttaaag |
2547598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 329
Target Start/End: Original strand, 2491070 - 2491174
Alignment:
| Q |
225 |
gttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttg |
324 |
Q |
| |
|
||||||||||||||| ||||| ||| |||||||||||||||| || | ||||||||| || ||||||||||| || |||||||| | ||||||||| |
|
|
| T |
2491070 |
gttagggaacctttcaaagagacgattaaggaaagggattgttgcatcggagattgtgaccgaaaatcggagacggtttgtgatggacagaaactgtttt |
2491169 |
T |
 |
| Q |
325 |
gagac |
329 |
Q |
| |
|
||||| |
|
|
| T |
2491170 |
gagac |
2491174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 350
Target Start/End: Complemental strand, 2381443 - 2381369
Alignment:
| Q |
276 |
gattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatggaaagagatttgaaagt |
350 |
Q |
| |
|
|||| ||| |||||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||||||| |
|
|
| T |
2381443 |
gattttgacggagaatcggagactgttggtgatcgagagtaactgtttggagacgatggaaagagacttgaaagt |
2381369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 2486272 - 2486353
Alignment:
| Q |
248 |
gatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagac |
329 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||| | ||||||||| ||||| |
|
|
| T |
2486272 |
gatgaaggaaagggattgttttctcggagattgtgaccgagaatcggagacggttggtgatggacagaaactgttttgagac |
2486353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 12126820 - 12126937
Alignment:
| Q |
223 |
aggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtt |
322 |
Q |
| |
|
||||| |||||||||| ||| ||| | | ||||||||||||| ||||| ||| || || ||||||| ||||||| ||||||||||||| ||| |||| |
|
|
| T |
12126820 |
aggttggggaaccttttgaataggcggtcaaggaaagggattttttcatctgagactgcgatggagaataggagacggttggtgatggagagaaattgtt |
12126919 |
T |
 |
| Q |
323 |
tggagaccatggaaagag |
340 |
Q |
| |
|
||||||| ||||| |||| |
|
|
| T |
12126920 |
tggagacaatggagagag |
12126937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 348
Target Start/End: Original strand, 2525699 - 2525822
Alignment:
| Q |
225 |
gttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttg |
324 |
Q |
| |
|
||||||||||||||| ||||| ||| ||| |||||||| ||| || | ||||||||| ||||||| |||| ||||||||||| | ||||||||| |
|
|
| T |
2525699 |
gttagggaacctttcaaagagacgattaagaaaagggatagttgcattggagattgtgaccaagaatcgaagactgttggtgatggacagaaactgtttt |
2525798 |
T |
 |
| Q |
325 |
gagaccatggaaagagatttgaaa |
348 |
Q |
| |
|
||||| | ||| |||||| ||||| |
|
|
| T |
2525799 |
gagacgagggagagagatctgaaa |
2525822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 329
Target Start/End: Complemental strand, 5102222 - 5102100
Alignment:
| Q |
207 |
gatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttca-cagtagattgtgagggagaatcggagacgattggt |
305 |
Q |
| |
|
||||| ||| || |||| |||||||||||||||||| ||| || ||| ||||||||| ||| | |||| |||||||| |||||||| |||| ||| || |
|
|
| T |
5102222 |
gatgttgagtgatgtgacgttagggaacctttcgaaaaggagaggaatgaaagggatggttcgatcagt-gattgtgaccgagaatcgaagactattagt |
5102124 |
T |
 |
| Q |
306 |
gatggagaaaaactgtttggagac |
329 |
Q |
| |
|
||| || ||||||||||| ||||| |
|
|
| T |
5102123 |
gatagacaaaaactgtttcgagac |
5102100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 2460370 - 2460420
Alignment:
| Q |
11 |
tcaatttcttcatcttttcagacagagctcgcaatccatcttcaggaatat |
61 |
Q |
| |
|
||||||| |||||||||| |||||| |||||||||||||||||| ||||| |
|
|
| T |
2460370 |
tcaattttttcatctttttggacagaactcgcaatccatcttcagaaatat |
2460420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 553992 - 554040
Alignment:
| Q |
281 |
tgagggagaatcggagacgattggtgatggagaaaaactgtttggagac |
329 |
Q |
| |
|
|||| ||||||| |||||||||||||||||| || |||||||| ||||| |
|
|
| T |
553992 |
tgagtgagaatctgagacgattggtgatggataagaactgtttagagac |
554040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 1547517 - 1547469
Alignment:
| Q |
281 |
tgagggagaatcggagacgattggtgatggagaaaaactgtttggagac |
329 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
1547517 |
tgagagagaatcggagacggttggtgatggagaggaattgtttggagac |
1547469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 2467676 - 2467724
Alignment:
| Q |
357 |
gttgtcgtcgaggaatttgaagatgctctcccatatttcctctggtaaa |
405 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
2467676 |
gttgtcgttgaggaatttgaagatgcgctcccataactcctttggtaaa |
2467724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 2519145 - 2519273
Alignment:
| Q |
195 |
ggaaaagagagagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcgg |
294 |
Q |
| |
|
|||| |||||| ||||| ||| || || | ||| |||||||| || ||||| ||||||||||||||||||||| | ||||||||| ||| |||| |
|
|
| T |
2519145 |
ggaagagagagtgatgttgagtgatgtaacgttggggaacctatcaaagagacgatgaaggaaagggattgtttgatctgagattgtgactgaggatcga |
2519244 |
T |
 |
| Q |
295 |
agacgattggtgatggagaaaaactgttt |
323 |
Q |
| |
|
| ||| ||||||||||| | ||||||||| |
|
|
| T |
2519245 |
aaacggttggtgatggacagaaactgttt |
2519273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 2625491 - 2625451
Alignment:
| Q |
211 |
tcgagagaggtgaggttagggaacctttcgaagaggtgatg |
251 |
Q |
| |
|
||||| || ||||||||||||||||||| |||||||||||| |
|
|
| T |
2625491 |
tcgagggatgtgaggttagggaacctttggaagaggtgatg |
2625451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 5035810 - 5035862
Alignment:
| Q |
360 |
gtcgtcgaggaatttgaagatgctctcccatatttcctctggtaaacttgaac |
412 |
Q |
| |
|
||||| |||||||||||||||| | ||||||| |||||||||||| |||||| |
|
|
| T |
5035810 |
gtcgttgaggaatttgaagatgttttcccataaatcctctggtaaatttgaac |
5035862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 6007657 - 6007725
Alignment:
| Q |
275 |
agattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatggaaagagatt |
343 |
Q |
| |
|
|||| ||||| ||||||||||||| ||||||||||||| |||||||| ||||| | ||| ||||||| |
|
|
| T |
6007657 |
agatagtgagagagaatcggagactgttggtgatggagaggaactgtttcgagacgagggagagagatt |
6007725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 350
Target Start/End: Complemental strand, 15838095 - 15837955
Alignment:
| Q |
210 |
gtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatg |
309 |
Q |
| |
|
||||||||| || |||||||||||||||| |||||||| | ||| |||||||||||||| | |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
15838095 |
gtcgagagatgttaggttagggaacctttggaagaggttaggaatgaaagggattgtttgatctatgattttgagggagaatcggagacggttggtgatg |
15837996 |
T |
 |
| Q |
310 |
gagaaaaactgtttggagaccatggaaagagatttgaaagt |
350 |
Q |
| |
|
|||| |||||||||||||||||| || || || |||||||| |
|
|
| T |
15837995 |
gagagaaactgtttggagaccatcgagagggacttgaaagt |
15837955 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 33161430 - 33161479
Alignment:
| Q |
280 |
gtgagggagaatcggagacgattggtgatggagaaaaactgtttggagac |
329 |
Q |
| |
|
||||| |||||||| |||| ||| |||||||||| ||||||||||||||| |
|
|
| T |
33161430 |
gtgagtgagaatcgaagactattagtgatggagagaaactgtttggagac |
33161479 |
T |
 |
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Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 405
Target Start/End: Original strand, 39516853 - 39516979
Alignment:
| Q |
279 |
tgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatggaaagagatttgaaagtctggttgttgtcgtcgaggaatttgaag |
378 |
Q |
| |
|
||||| |||||||| |||||| |||||||||| || ||| ||| ||||||| ||||| ||||| |||||||| ||||||| ||||||||||||||||| |
|
|
| T |
39516853 |
tgtgacggagaatctgagacggttggtgatggcgagaaattgtctggagacgatggagagagacttgaaagtgtggttgtcaccgtcgaggaatttgaag |
39516952 |
T |
 |
| Q |
379 |
atgctctcccatatttcctctggtaaa |
405 |
Q |
| |
|
|| ||||||||| ||||| |||||| |
|
|
| T |
39516953 |
atagactcccatatatcctccggtaaa |
39516979 |
T |
 |
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Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 329
Target Start/End: Complemental strand, 39253025 - 39252916
Alignment:
| Q |
220 |
gtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaact |
319 |
Q |
| |
|
|||||||| ||||||||||| ||||| || ||||| |||||||||||| | | ||||| ||||||| |||||||||| ||| ||||||||| ||||| |
|
|
| T |
39253025 |
gtgaggttggggaacctttcaaagagaagaggaagggaagggattgtttgatcggtgattgcgagggaggatcggagacggttgctgatggagagaaact |
39252926 |
T |
 |
| Q |
320 |
gtttggagac |
329 |
Q |
| |
|
|| ||||||| |
|
|
| T |
39252925 |
gtatggagac |
39252916 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 32268761 - 32268822
Alignment:
| Q |
274 |
tagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatgga |
335 |
Q |
| |
|
|||| |||||| |||||||| ||||| ||||||||||||| |||||||||||||| ||||| |
|
|
| T |
32268761 |
tagactgtgagagagaatcgaagacggttggtgatggagagtaactgtttggagacgatgga |
32268822 |
T |
 |
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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 2576513 - 2576415
Alignment:
| Q |
225 |
gttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgttt |
323 |
Q |
| |
|
|||||||| ||||||||||||| || || ||||||||| ||| | | |||||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
2576513 |
gttagggatcctttcgaagaggcgacaaatgaaagggatggttcaatcggtgattgtgaccgagaatcgaagacgattggtgatggataaaaactgttt |
2576415 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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