View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14869_low_19 (Length: 251)
Name: NF14869_low_19
Description: NF14869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14869_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 20077235 - 20077023
Alignment:
| Q |
17 |
aggcatatggacgatggcatttaata--caccaaagcacaagagagctttcctgcatcgaaaaagccattctttattctaatttgtttccaaaaaattgt |
114 |
Q |
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| T |
20077235 |
aggcatatggatgatggcatttaatatacaccaaagcacaagagagctttcctgcatcgaaaaagccattctttattctaatttgtttccaaaaaattgt |
20077136 |
T |
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| Q |
115 |
gctacatacaccaaagcacaaaaaatgttaaaagtcgtgcaacacatggttgtatgtacaaaagatagctttccaatgaatagatgtgctagcacatttg |
214 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
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| T |
20077135 |
gctacatacaccaaagcacaaaaaatgtcaaaagtcgtgcaacacatggttgtatgtacaaaagagagctttccaatgaatagatgtgctagcatatttg |
20077036 |
T |
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| Q |
215 |
ttctaatccattt |
227 |
Q |
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||||||||||||| |
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| T |
20077035 |
ttctaatccattt |
20077023 |
T |
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