View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14869_low_23 (Length: 236)
Name: NF14869_low_23
Description: NF14869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14869_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 37338202 - 37338422
Alignment:
| Q |
1 |
tcttgatctgcaagagaaattggaaacagcgcaactcggatccaagatgaggagcaacttatataagtctacttcaaccttcaaaggttcaagagattca |
100 |
Q |
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| T |
37338202 |
tcttgatctgcaagagaaattggaaatagcgcaactcggatccaagatgaggagcaacttatataagtctacttcaatcttcaaaggttcaagagattca |
37338301 |
T |
|
| Q |
101 |
gaaaataataggtcttgcctaggtaaaggaaaatttgcttcacttgcaacaccatccaaaacccttgttcaaagtagggatacattgaattttaatggaa |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37338302 |
gaaaataataggtcttgccttggtaaaggaaaatttgcttcacttgcaacaccatccaaaacccttgttcaaagtagggatacattgaatttgaatggaa |
37338401 |
T |
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| Q |
201 |
ataggagatacttgaagaaga |
221 |
Q |
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||||||||||||||||||||| |
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| T |
37338402 |
ataggagatacttgaagaaga |
37338422 |
T |
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