View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14869_low_25 (Length: 235)
Name: NF14869_low_25
Description: NF14869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14869_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 46464275 - 46464505
Alignment:
| Q |
1 |
attaaaaaggataaaatttataattaaatttccttttaggtcctttcaaacacagttcttaaa----------tgatttatgacacattacagttgagag |
90 |
Q |
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| T |
46464275 |
attaaaaaggataaaatttataattaaatttccttttaggtcctttcaaacacagttcttaaaagaattatcatgatttatgacacattacagttgagag |
46464374 |
T |
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| Q |
91 |
taatttattttggtatatctttgttatttgacggcacatacattcttgctggtcacgcgacacaatattagttgacatgcttcgcaaatgttttgtatgt |
190 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46464375 |
tattttattttggtatatctttgttatttgacggcacatacattcttgctggtcacgcgacacaatattagttgacatgcttcgcaaatgttttgtatgt |
46464474 |
T |
|
| Q |
191 |
aaggatttttcgtcacgttttgtgtgagtat |
221 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
46464475 |
aaggatttttcgtcacgttttgtgtgagtat |
46464505 |
T |
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