View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1486_high_26 (Length: 259)
Name: NF1486_high_26
Description: NF1486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1486_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 13858790 - 13858561
Alignment:
| Q |
1 |
tattagtagaaaggactgatgatggcaatgatatacgatgactattagcacgccagaccccagctagcaattgtgatttctcatcccttgtaacaattga |
100 |
Q |
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| T |
13858790 |
tattagcagaaaggactgatgatggcaatgatatacgatgactattagca-gcctgaccccaactagcaattgtgatttctaatcccttgtaacaattga |
13858692 |
T |
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| Q |
101 |
catttcatatcttcagtacaaagaaagtttcaaaagtcttaacctaatgggatgatttctcaacttaccttaaataattttcacaaaatcttgattatat |
200 |
Q |
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| T |
13858691 |
catttcatatcttcaatacaaagaaagtttcaaaagtcttaacctaatgggatgatttctcaacttaccttaaataattttcacaaaatcttgattatat |
13858592 |
T |
|
| Q |
201 |
tgtgtaatggcacattggtcagagtagcatt |
231 |
Q |
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| T |
13858591 |
tgtgtaatggcacattggtcagagtggcatt |
13858561 |
T |
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