View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1486_low_19 (Length: 322)

Name: NF1486_low_19
Description: NF1486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1486_low_19
NF1486_low_19
[»] chr2 (31 HSPs)
chr2 (54-289)||(928193-928425)
chr2 (63-144)||(25787328-25787409)
chr2 (63-142)||(3041557-3041635)
chr2 (55-141)||(30544514-30544600)
chr2 (57-136)||(37660143-37660222)
chr2 (50-144)||(30264760-30264854)
chr2 (50-155)||(14295915-14296020)
chr2 (13-54)||(45076338-45076379)
chr2 (57-144)||(28967396-28967482)
chr2 (57-140)||(36173063-36173146)
chr2 (57-136)||(37077169-37077248)
chr2 (50-156)||(15183159-15183265)
chr2 (57-155)||(45065052-45065150)
chr2 (13-53)||(36103504-36103544)
chr2 (56-155)||(13849879-13849978)
chr2 (56-155)||(14288411-14288510)
chr2 (56-111)||(20683714-20683769)
chr2 (50-156)||(10812178-10812284)
chr2 (24-54)||(28143867-28143897)
chr2 (50-155)||(11222474-11222579)
chr2 (24-53)||(15239814-15239843)
chr2 (56-141)||(25558348-25558432)
chr2 (17-54)||(25795234-25795271)
chr2 (50-155)||(32854938-32855043)
chr2 (50-155)||(34357158-34357263)
chr2 (13-46)||(40534517-40534550)
chr2 (50-118)||(11560205-11560273)
chr2 (56-156)||(13753934-13754034)
chr2 (24-52)||(21795037-21795065)
chr2 (50-158)||(28145730-28145838)
chr2 (82-158)||(33947619-33947695)
[»] chr6 (19 HSPs)
chr6 (55-140)||(32251111-32251196)
chr6 (55-156)||(11000970-11001071)
chr6 (55-155)||(15432651-15432751)
chr6 (82-161)||(2381197-2381276)
chr6 (57-155)||(19811936-19812034)
chr6 (62-140)||(31282688-31282767)
chr6 (50-159)||(3849041-3849150)
chr6 (50-155)||(30388701-30388806)
chr6 (55-156)||(31854652-31854753)
chr6 (13-53)||(10145212-10145252)
chr6 (13-53)||(12605607-12605647)
chr6 (50-156)||(17193137-17193243)
chr6 (17-51)||(23916242-23916276)
chr6 (57-165)||(364706-364814)
chr6 (50-162)||(1751587-1751699)
chr6 (17-53)||(2913448-2913484)
chr6 (50-118)||(17124139-17124207)
chr6 (57-165)||(26470886-26470994)
chr6 (19-51)||(30438860-30438892)
[»] chr1 (31 HSPs)
chr1 (55-149)||(1859081-1859175)
chr1 (63-144)||(45229976-45230057)
chr1 (56-158)||(32168470-32168572)
chr1 (63-156)||(41155254-41155347)
chr1 (56-157)||(51613389-51613490)
chr1 (57-161)||(52825251-52825355)
chr1 (93-144)||(2571940-2571991)
chr1 (50-144)||(37609453-37609547)
chr1 (50-155)||(21927848-21927953)
chr1 (56-157)||(36318331-36318432)
chr1 (56-152)||(7782934-7783030)
chr1 (50-158)||(35531447-35531555)
chr1 (17-52)||(27687839-27687874)
chr1 (50-161)||(50825724-50825835)
chr1 (57-111)||(11248805-11248859)
chr1 (50-144)||(19455551-19455644)
chr1 (24-54)||(19998407-19998437)
chr1 (55-156)||(1039524-1039625)
chr1 (55-156)||(1046430-1046531)
chr1 (63-144)||(8973616-8973697)
chr1 (24-53)||(15699461-15699490)
chr1 (50-155)||(28679001-28679106)
chr1 (50-155)||(30702442-30702547)
chr1 (55-144)||(38569777-38569866)
chr1 (55-144)||(50152424-50152513)
chr1 (24-53)||(51590552-51590581)
chr1 (13-46)||(52030872-52030905)
chr1 (13-53)||(13321825-13321865)
chr1 (13-53)||(26760284-26760324)
chr1 (24-52)||(48565649-48565677)
chr1 (8-52)||(51590428-51590472)
[»] chr8 (30 HSPs)
chr8 (55-155)||(29125882-29125982)
chr8 (55-144)||(41890513-41890602)
chr8 (55-140)||(42352734-42352819)
chr8 (57-144)||(11163257-11163344)
chr8 (57-144)||(38074267-38074354)
chr8 (50-155)||(3720660-3720765)
chr8 (13-54)||(9550105-9550146)
chr8 (50-155)||(11993873-11993978)
chr8 (63-155)||(27193221-27193313)
chr8 (8-52)||(34604887-34604931)
chr8 (57-164)||(6660924-6661031)
chr8 (57-164)||(6741326-6741433)
chr8 (50-157)||(23429887-23429994)
chr8 (82-156)||(11727562-11727636)
chr8 (8-54)||(34745253-34745299)
chr8 (50-162)||(167632-167744)
chr8 (8-56)||(7548491-7548539)
chr8 (50-154)||(33935215-33935319)
chr8 (8-52)||(43292566-43292610)
chr8 (17-53)||(43932046-43932082)
chr8 (17-53)||(43932164-43932200)
chr8 (13-52)||(7548609-7548648)
chr8 (50-141)||(31028648-31028739)
chr8 (50-155)||(14263524-14263629)
chr8 (24-53)||(34604778-34604807)
chr8 (19-52)||(35584000-35584033)
chr8 (57-144)||(9301705-9301790)
chr8 (24-52)||(13831997-13832025)
chr8 (24-52)||(35794648-35794676)
chr8 (57-157)||(45317630-45317730)
[»] chr5 (31 HSPs)
chr5 (57-157)||(4608984-4609084)
chr5 (55-158)||(40927112-40927215)
chr5 (55-144)||(21157606-21157695)
chr5 (54-144)||(11413686-11413776)
chr5 (57-155)||(18393130-18393228)
chr5 (55-144)||(21150465-21150554)
chr5 (50-141)||(10359387-10359478)
chr5 (55-144)||(18676572-18676659)
chr5 (50-157)||(18794743-18794850)
chr5 (63-135)||(8849304-8849376)
chr5 (13-52)||(24173418-24173457)
chr5 (57-144)||(25785880-25785967)
chr5 (56-144)||(6007856-6007944)
chr5 (8-52)||(7537127-7537171)
chr5 (55-155)||(28463542-28463642)
chr5 (13-53)||(29452003-29452043)
chr5 (56-155)||(4175638-4175737)
chr5 (50-153)||(10889246-10889349)
chr5 (13-52)||(29451891-29451930)
chr5 (19-54)||(30132838-30132873)
chr5 (50-156)||(7579820-7579926)
chr5 (17-51)||(13932576-13932610)
chr5 (24-54)||(19211276-19211306)
chr5 (13-51)||(27600869-27600907)
chr5 (50-156)||(34261273-34261379)
chr5 (50-144)||(38363164-38363258)
chr5 (24-53)||(5355673-5355702)
chr5 (57-136)||(6330773-6330853)
chr5 (17-53)||(7537018-7537054)
chr5 (8-48)||(20502193-20502233)
chr5 (19-51)||(30132905-30132937)
[»] chr4 (60 HSPs)
chr4 (58-144)||(38865898-38865984)
chr4 (57-155)||(6150677-6150775)
chr4 (63-156)||(48510038-48510131)
chr4 (55-155)||(55430464-55430564)
chr4 (55-157)||(41813623-41813725)
chr4 (55-157)||(39308912-39309014)
chr4 (59-156)||(37551830-37551927)
chr4 (50-155)||(47428512-47428617)
chr4 (56-140)||(56486383-56486467)
chr4 (57-128)||(56499777-56499848)
chr4 (56-157)||(43887964-43888064)
chr4 (57-144)||(1181064-1181152)
chr4 (56-128)||(34925504-34925576)
chr4 (13-53)||(36196476-36196516)
chr4 (56-156)||(36408705-36408805)
chr4 (56-156)||(36422871-36422971)
chr4 (13-53)||(43556688-43556728)
chr4 (8-51)||(36196364-36196407)
chr4 (13-51)||(4418208-4418246)
chr4 (57-155)||(20294267-20294365)
chr4 (17-51)||(25756711-25756745)
chr4 (57-155)||(34603607-34603705)
chr4 (13-51)||(42159972-42160010)
chr4 (57-155)||(48087681-48087779)
chr4 (55-156)||(3802142-3802243)
chr4 (50-155)||(12252083-12252188)
chr4 (82-155)||(30152017-30152090)
chr4 (63-144)||(51655041-51655122)
chr4 (50-158)||(13629349-13629457)
chr4 (50-158)||(50623394-50623502)
chr4 (20-51)||(5813684-5813715)
chr4 (57-144)||(14949247-14949334)
chr4 (17-52)||(25756827-25756862)
chr4 (8-51)||(25874806-25874849)
chr4 (13-52)||(29686511-29686550)
chr4 (8-51)||(32193474-32193517)
chr4 (8-51)||(37895254-37895297)
chr4 (50-156)||(3436223-3436329)
chr4 (13-47)||(4418100-4418134)
chr4 (56-118)||(6767366-6767428)
chr4 (19-53)||(33622877-33622911)
chr4 (50-144)||(33809081-33809175)
chr4 (50-144)||(46871915-46872009)
chr4 (50-156)||(48782182-48782288)
chr4 (13-54)||(1205193-1205234)
chr4 (50-155)||(19527364-19527469)
chr4 (24-53)||(29686397-29686426)
chr4 (50-155)||(31862142-31862247)
chr4 (50-155)||(33755238-33755343)
chr4 (24-53)||(37895377-37895406)
chr4 (50-155)||(38617463-38617568)
chr4 (21-49)||(18838949-18838977)
chr4 (19-51)||(24100758-24100790)
chr4 (50-114)||(35381571-35381635)
chr4 (24-52)||(35877312-35877340)
chr4 (57-161)||(38009929-38010033)
chr4 (56-156)||(44069013-44069113)
chr4 (19-51)||(52136698-52136730)
chr4 (56-144)||(53691816-53691904)
chr4 (24-52)||(54864062-54864090)
[»] chr3 (31 HSPs)
chr3 (55-155)||(26748333-26748433)
chr3 (63-144)||(34750646-34750727)
chr3 (55-144)||(23771278-23771367)
chr3 (55-144)||(2642701-2642790)
chr3 (8-52)||(19227414-19227458)
chr3 (8-56)||(53703724-53703772)
chr3 (50-156)||(790529-790635)
chr3 (8-53)||(53284422-53284467)
chr3 (50-155)||(54106243-54106348)
chr3 (56-128)||(34266605-34266677)
chr3 (57-144)||(28226418-28226505)
chr3 (17-51)||(2544436-2544470)
chr3 (50-156)||(20848880-20848986)
chr3 (24-54)||(31376171-31376201)
chr3 (57-155)||(35077367-35077465)
chr3 (50-144)||(43554381-43554475)
chr3 (13-51)||(46220365-46220403)
chr3 (57-155)||(47844006-47844104)
chr3 (57-155)||(53290929-53291027)
chr3 (50-156)||(53745442-53745548)
chr3 (50-155)||(36234347-36234452)
chr3 (8-53)||(39617017-39617062)
chr3 (50-155)||(47104316-47104421)
chr3 (24-52)||(8769255-8769283)
chr3 (13-53)||(25313275-25313315)
chr3 (8-52)||(31376281-31376325)
chr3 (50-114)||(35315153-35315217)
chr3 (24-56)||(39616905-39616937)
chr3 (50-90)||(45055232-45055272)
chr3 (24-52)||(45113856-45113884)
chr3 (24-52)||(53703853-53703881)
[»] chr7 (21 HSPs)
chr7 (63-155)||(32049394-32049485)
chr7 (57-162)||(3177903-3178008)
chr7 (56-144)||(46715466-46715554)
chr7 (55-157)||(8966063-8966165)
chr7 (56-140)||(30586840-30586924)
chr7 (50-158)||(35746802-35746910)
chr7 (8-52)||(41487897-41487941)
chr7 (50-158)||(41675344-41675452)
chr7 (57-144)||(26803595-26803682)
chr7 (84-157)||(9142453-9142526)
chr7 (50-155)||(18470287-18470392)
chr7 (8-48)||(24164518-24164558)
chr7 (8-52)||(27320400-27320444)
chr7 (8-52)||(45025592-45025636)
chr7 (57-144)||(33071897-33071984)
chr7 (13-51)||(33901037-33901075)
chr7 (82-159)||(8921022-8921099)
chr7 (24-53)||(12806905-12806934)
chr7 (50-155)||(31430539-31430644)
chr7 (24-53)||(41487788-41487817)
chr7 (19-56)||(48948936-48948973)
[»] scaffold0006 (1 HSPs)
scaffold0006 (57-144)||(96224-96311)
[»] scaffold0003 (1 HSPs)
scaffold0003 (57-155)||(252574-252672)
[»] scaffold0036 (1 HSPs)
scaffold0036 (57-141)||(23130-23214)
[»] scaffold0236 (1 HSPs)
scaffold0236 (57-144)||(14413-14500)
[»] scaffold0767 (1 HSPs)
scaffold0767 (17-52)||(3807-3842)
[»] scaffold0280 (1 HSPs)
scaffold0280 (50-128)||(8161-8239)
[»] scaffold0110 (1 HSPs)
scaffold0110 (24-53)||(40313-40342)
[»] scaffold0040 (1 HSPs)
scaffold0040 (50-155)||(69080-69185)
[»] scaffold0059 (2 HSPs)
scaffold0059 (24-52)||(26584-26612)
scaffold0059 (24-52)||(26708-26736)
[»] scaffold0023 (1 HSPs)
scaffold0023 (17-53)||(112820-112856)


Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 54 - 289
Target Start/End: Original strand, 928193 - 928425
Alignment:
Q  54 tgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggag 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  928193 tgtaaaacaacatttaatgatgtattagactttgaaaacgacagttaattagaaacaaaaattttatgcaaaagtgacaattataaaggaacggagggag 928292  T
Q  154 tataatttaatgttactgcagaattgaggccagtcggatttttgttattcttccgatatgcatgtgtatatgagattctccgagtgtgaattgattgaaa 253  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  928293 tataatttaatgttattgaagaattgaggccagttggatttttgttattcttccgatatgcatgtgtatatgagattctccgagtgtgaattgattgaa- 928391  T
Q  254 ttattattttaaagttaagatgtagttaaatattgt 289  Q
      ||||||||||||||||||||||||| ||||||||    
T  928392 --attattttaaagttaagatgtagttgaatattgt 928425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 25787409 - 25787328
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||||||  |||  ||||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||    
T  25787409 acatttaatgatacattgaactttgaaaacgacagttaattaaaaacaaaatatttatgcaaaagtgacaattataaaggaa 25787328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 3041635 - 3041557
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaagg 142  Q
    ||||||||||||  |||| |||||||||| || | |||||||||||||||| |||||||||||||| |||||||||||||    
T  3041635 acatttaatgatacattaaactttgaaaatgatagttaattaaaaacaaaa-ttttatgcaaaagtgacaattataaagg 3041557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 30544600 - 30544514
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaag 141  Q
    |||||||||||||||||| || |||  |||||||||  |||| ||||||| ||||||||| ||||||||||||| ||||||| ||||    
T  30544600 gtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaaatttatgcaaaagtgacaattaaaaag 30544514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 37660222 - 37660143
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaatta 136  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| ||||||||| ||| ||||||||| |||||||    
T  37660222 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaatttctgcaaaagtgacaatta 37660143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 30264760 - 30264854
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| |||||||||||||||||| ||||||  |||||||||| |||| |||| ||| ||||||| |||| | ||||||| ||| ||| |||||||    
T  30264760 tattggtaaaacaacatttaatgttgtattgaactttgaaaatgacagttaaataagaacaaaatttttctccaaaagtgacacttaaaaaggaa 30264854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 14295915 - 14296020
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| ||||||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||    
T  14295915 tattggtaaaacaacatttaatgttgtattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggag 14296014  T
Q  150 ggagta 155  Q
    ||||||    
T  14296015 ggagta 14296020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 45076379 - 45076338
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtattt 54  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  45076379 aaaatcaattttttcttataataaggaccggagggagtattt 45076338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 28967396 - 28967482
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||| ||||  |||||||||||| ||||||| |||||||    
T  28967396 aaaacaacatttaatgttgtattgaactttgaaagtgacatttaattagaaactaaaa-attatgcaaaagtgacaattaaaaaggaa 28967482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 36173146 - 36173063
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaa 140  Q
    |||||||||||||||| | ||||  |||||||||| |||| ||||||| |||||||||  ||||| |||||| ||| |||||||    
T  36173146 aaaacaacatttaatgttatattgaactttgaaaatgacacttaattagaaacaaaaaaattatgtaaaagtgacagttataaa 36173063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 37077248 - 37077169
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaatta 136  Q
    |||| ||||||||||| ||||||  |||||||||| |||| |||| |||||||||||| ||| | ||||||| |||||||    
T  37077248 aaaataacatttaatgttgtattgaactttgaaaatgacacttaaataaaaacaaaaaatttcttcaaaagtgacaatta 37077169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 15183159 - 15183265
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||| ||||  ||||||||| || ||||||||| ||| |  |||||| ||| ||| ||||||| ||||    
T  15183159 tattggtaaaacaacatttaatgttgcattgaacttcgaaagtgacaattaaatagaaacaaaaaatttctcaaaaagtgacacttaaaaaggaacgaag 15183258  T
Q  150 ggagtat 156  Q
    |||||||    
T  15183259 ggagtat 15183265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 45065150 - 45065052
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||| ||||||  |||||||||   ||| ||||||| |||||||||   ||||||||||| ||||||| ||| ||| | ||||||||    
T  45065150 aaaacaacatttaatgttgtattgaactttgaaagtaacacttaattagaaacaaaaaaaatatgcaaaagtgacaattaaaaaagaacggagggagta 45065052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 36103504 - 36103544
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  36103504 aaaatcaactttttcttataataaggaccggagggagtatt 36103544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 13849879 - 13849978
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||||||| |||  |||||||||  |||| |||| ||| |||||||| ||| |  |||||| ||||||| |||| || | ||||||||    
T  13849879 taaaacaacatttaatgatgcattgaactttgaaagtgacagttaaataagaacaaaaaatttctttaaaagtgacaattaaaaagaaacggagggagta 13849978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 14288510 - 14288411
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||||||| | ||||  |||||||||| |||| |||| ||  |||||||||||| | ||||||| ||| ||| |||| || | ||||||||    
T  14288510 taaaacaacatttaatgttatattgaactttgaaaatgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggagta 14288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 20683714 - 20683769
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaa 111  Q
    |||| |||||||||||||||||||  |||||||||| |||| ||||| ||||||||    
T  20683714 taaagcaacatttaatgatgtattgaactttgaaaatgacagttaatcaaaaacaa 20683769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 10812284 - 10812178
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  ||||||| |||| | ||||||| ||| ||| ||||||| | ||    
T  10812284 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 10812185  T
Q  150 ggagtat 156  Q
    |||||||    
T  10812184 ggagtat 10812178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 28143867 - 28143897
Alignment:
Q  24 tttcttataataaggaccggagggagtattt 54  Q
    |||||||||||||||||||||||||||||||    
T  28143867 tttcttataataaggaccggagggagtattt 28143897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 11222474 - 11222579
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| || ||||||||| ||| | ||||||  ||| ||| ||||||| | ||    
T  11222474 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttcttcaaaagagacacttaaaaaggaacggag 11222573  T
Q  150 ggagta 155  Q
    ||||||    
T  11222574 ggagta 11222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 15239814 - 15239843
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  15239814 tttcttataataaggaccggagggagtatt 15239843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 25558348 - 25558432
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaag 141  Q
    ||||||||||||||||| || |||| |||||||||  |||| |||| || ||||||||||||| | ||||||| ||| ||| ||||    
T  25558348 taaaacaacatttaatgttgcatta-actttgaaagtgacagttaaatagaaacaaaaattttctccaaaagtgacacttaaaaag 25558432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 25795271 - 25795234
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtattt 54  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  25795271 tcaattgtttcttataataaggaccggaggtagtattt 25795234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 32854938 - 32855043
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||| |  |||||| ||||||||||| ||| | ||    
T  32854938 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctctaaaagtgacaattataaatgaacggag 32855037  T
Q  150 ggagta 155  Q
    ||||||    
T  32855038 ggagta 32855043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 34357263 - 34357158
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  ||||||||| ||  ||||||  |||| | ||||||| ||| ||| ||||||| | ||    
T  34357263 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaataggaacaaattttttctccaaaagtgacacttaaaaaggaacggag 34357164  T
Q  150 ggagta 155  Q
    ||||||    
T  34357163 ggagta 34357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 40534550 - 40534517
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagg 46  Q
    |||||||||| |||||||||||||||||||||||    
T  40534550 aaaatcaattgtttcttataataaggaccggagg 40534517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 11560205 - 11560273
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaatttt 118  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| || |||||||||||||    
T  11560205 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaatttt 11560273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 13754034 - 13753934
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||||||| ||||||  |||||||||  |||| |||| |   ||||||||| || | ||||||  ||| ||| ||||||| ||||||||||    
T  13754034 taaaacaacatttaatgttgtattgaactttgaaagtgacagttaaattggaacaaaaatgttctccaaaagagacacttaaaaaggaacgaagggagta 13753935  T
Q  156 t 156  Q
    |    
T  13753934 t 13753934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 21795037 - 21795065
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  21795037 tttcttataataaggaccggagggagtat 21795065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 28145730 - 28145838
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  || ||||||||| | ||||||| ||| ||| ||||||| | ||    
T  28145730 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaagaaaaattttctccaaaagtgacacttaaaaaggaacggag 28145829  T
Q  150 ggagtataa 158  Q
    | |||||||    
T  28145830 gaagtataa 28145838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 33947619 - 33947695
Alignment:
Q  82 actttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtataa 158  Q
    |||||||||  |||| ||||||| ||||||||| ||| || |||||| ||| ||||||||||| | ||| |||||||    
T  33947619 actttgaaagtgacacttaattagaaacaaaaaatttctgtaaaagtgacagttataaaggaacggaggtagtataa 33947695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 32251111 - 32251196
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaa 140  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  32251111 gtaaaacaacatttaatgatgtattggactttgaaaacgacagttaattagaaacaaaaattttatgcaaaagtgacaattataaa 32251196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 11000970 - 11001071
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||| ||||||||||||  |||  ||||||||||||||| ||||||| ||||||||  ||||||||||||| ||||||||||||||||| | |||||    
T  11000970 gtaaaaccacatttaatgatacattgaactttgaaaacgacagttaattagaaacaaaatctttatgcaaaagtgacaattataaaggaatggatggagt 11001069  T
Q  155 at 156  Q
    ||    
T  11001070 at 11001071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 15432751 - 15432651
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||| ||||||||||||  ||| |||||||||||||||| |||||| ||| ||||  || ||||||||||| ||||||||||||||| | |||||||    
T  15432751 gtaaaaccacatttaatgatacattggactttgaaaacgacagttaattgaaatcaaattttgtatgcaaaagtgacaattataaaggaacggagggagt 15432652  T
Q  155 a 155  Q
    |    
T  15432651 a 15432651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 2381197 - 2381276
Alignment:
Q  82 actttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtataattt 161  Q
    ||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||| | || |||||| ||||    
T  2381197 actttgaaaacgacagttaattgaaaacaaaatttttatgcaaaagtgacaattataaaggaacggagagagtatcattt 2381276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 19812034 - 19811936
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||||||||  ||||||||| || ||||||| ||||||| | ||||||||    
T  19812034 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaaattatgcaaacgtgacaattaaaaaggaacggagggagta 19811936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 31282688 - 31282767
Alignment:
Q  62 aacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaa-aattttatgcaaaagttacaattataaa 140  Q
    ||||||||||||||||||  |||||||||| |||||||||| |||||||||   ||||||||| |||| |||||||||||    
T  31282688 aacatttaatgatgtattgaactttgaaaatgacaattaatcaaaaacaaatttttttatgcagaagtgacaattataaa 31282767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 159
Target Start/End: Complemental strand, 3849150 - 3849041
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  ||||||| |||| | ||||||| ||| ||| ||||||| | ||    
T  3849150 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 3849051  T
Q  150 ggagtataat 159  Q
    ||||||||||    
T  3849050 ggagtataat 3849041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 30388806 - 30388701
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| |  |||  |||||||||  |||| |||||||  |||||||||||| | ||||||| ||| ||| ||||||| | ||    
T  30388806 tattggtaaaacaacatttaatgtttcattgaactttgaaagtgacagttaattaggaacaaaaattttcttcaaaagtgacacttaaaaaggaacggag 30388707  T
Q  150 ggagta 155  Q
    ||||||    
T  30388706 ggagta 30388701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 31854652 - 31854753
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    |||||| |||||||| || || |||  |||||||||  ||||||||| ||||||||||| |||| | ||||||| ||| ||| ||||||| | |||||||    
T  31854652 gtaaaataacatttattgttgcattgaactttgaaagtgacaattaaataaaaacaaaatttttctccaaaagtaacacttaaaaaggaacggagggagt 31854751  T
Q  155 at 156  Q
    ||    
T  31854752 at 31854753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 10145252 - 10145212
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  10145252 aaaatcaattatttcttataataaggatcggagggggtatt 10145212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 12605647 - 12605607
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  12605647 aaaatcaattgtttcttataataaggaacggagggagtatt 12605607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 17193243 - 17193137
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||| | ||||||| ||| ||| ||||||| | ||    
T  17193243 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacatttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggag 17193144  T
Q  150 ggagtat 156  Q
    |||||||    
T  17193143 ggagtat 17193137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 23916242 - 23916276
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagta 51  Q
    |||||| ||||||||||||||||||||||||||||    
T  23916242 tcaattgtttcttataataaggaccggagggagta 23916276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 364706 - 364814
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| || |||  | |||||||| |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | |  ||||||    
T  364706 aaaacaacatttaatgttgcattgaattttgaaaatgacagttaaatagtaacaaaaattttctccaaaagtgacacttaaaaaggaacggatcgagtat 364805  T
Q  157 aatttaatg 165  Q
    | |||||||    
T  364806 attttaatg 364814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 1751587 - 1751699
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||| ||||  || | |||| ||  |||||||| ||| | ||||||| ||| ||| ||||||| | ||    
T  1751587 tattggtaaaacaacatttaatgttgcattgaacttcgaaagtgaaagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggag 1751686  T
Q  150 ggagtataattta 162  Q
    |||||||||||||    
T  1751687 ggagtataattta 1751699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 2913448 - 2913484
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||| || |||||||||||||||||||||||||||    
T  2913448 tcaattgttgcttataataaggaccggagggagtatt 2913484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 17124139 - 17124207
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaatttt 118  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||||||||||| ||||    
T  17124139 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataaaaacaaaactttt 17124207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 26470886 - 26470994
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| || |||  |||||||||  ||||||||| ||  |||||||| ||| | ||||||  ||| ||| ||||||| | ||||||||     
T  26470886 aaaacaacatttaatgttgcattgaactttgaaagtgacaattaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagtaa 26470985  T
Q  157 aatttaatg 165  Q
     ||||||||    
T  26470986 tatttaatg 26470994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 30438860 - 30438892
Alignment:
Q  19 aattatttcttataataaggaccggagggagta 51  Q
    ||||||||||||||||||||| |||||||||||    
T  30438860 aattatttcttataataaggatcggagggagta 30438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 1859175 - 1859081
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||||||||||||||||||||||||| |||||||||| |||| |||| |||||| ||||| ||||||||||||| |||| |||||||||| ||||    
T  1859175 gtaaaacaacatttaatgatgtattaaactttgaaaatgacacttaactaaaaataaaaaatttatgcaaaagtaacaaatataaaggaacgaag 1859081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 45230057 - 45229976
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||||||  ||||||||||||||||||||| |||||  |||||||  || ||||||||||| |||||||||||||||    
T  45230057 acatttaatgatacattagactttgaaaacgacaactaattggaaacaaattttatatgcaaaagtgacaattataaaggaa 45229976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 32168470 - 32168572
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||||||| |||  |||||||||  |||| |||| || ||||||||||||| |  |||||| ||||||| ||||||| | ||||||||    
T  32168470 taaaacaacatttaatgatgcattgaactttgaaactgacagttaaatagaaacaaaaattttctctaaaagtgacaattaaaaaggaacggagggagta 32168569  T
Q  156 taa 158  Q
    |||    
T  32168570 taa 32168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 41155347 - 41155254
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    ||||||||||||  |||  | ||||||||||||| |||||||||||||||||||||||| ||| || || || ||||||||| | |||||||||    
T  41155347 acatttaatgataaattgaattttgaaaacgacagttaattaaaaacaaaaattttatggaaaggtgacgataataaaggaacggagggagtat 41155254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 51613490 - 51613389
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||||||| |||  |||||||||  |||| |||| ||  |||||||||||| |  |||||| ||||||| ||||||||| ||||||||    
T  51613490 taaaacaacatttaatgatgcattgaactttgaaagtgacagttaaataggaacaaaaattttctctaaaagtgacaattaaaaaggaatggagggagta 51613391  T
Q  156 ta 157  Q
    ||    
T  51613390 ta 51613389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 161
Target Start/End: Complemental strand, 52825355 - 52825251
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| |  |||  |||||||||  |||| |||||||||||||||||  ||||| ||||   ||| ||||||| ||| |||||||||||    
T  52825355 aaaacaacatttaatgttacattgaactttgaaagtgacagttaattaaaaacaaaaaaattatgtaaaaacgacagttataaaagaacgaagggagtat 52825256  T
Q  157 aattt 161  Q
    |||||    
T  52825255 aattt 52825251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 2571991 - 2571940
Alignment:
Q  93 gacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| ||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  2571991 gacagttaattagaaacaaaaaatttatgcaaaagtgacaattataaaggaa 2571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 37609453 - 37609547
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| |||||||||||||||| | || |||  |||||||||| |||| |||| ||| |||||||||||| | ||||||| ||| ||| |||||||    
T  37609453 tattggtaaaacaacatttaacgttgcattgaactttgaaaatgacagttaaataagaacaaaaattttctccaaaagtgacacttaaaaaggaa 37609547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 21927848 - 21927953
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||| ||||||||||| || |||  |||||||||  |||| |||| ||| |||||||| ||| ||||||||| ||| ||| ||||||| | ||    
T  21927848 tattggtaaaataacatttaatgttgcattgaactttgaaagtgacagttaaataagaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggag 21927947  T
Q  150 ggagta 155  Q
    ||||||    
T  21927948 ggagta 21927953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 36318432 - 36318331
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||||||| || |||  ||||||||| ||||| |||| || ||||||||| |||||  |||||| ||| ||| ||||||| | ||| ||||    
T  36318432 taaaacaacatttaatgttgcattgaactttgaaagcgacagttaaatagaaacaaaaaatttatctaaaagtgacacttaaaaaggaacggaggaagta 36318333  T
Q  156 ta 157  Q
    ||    
T  36318332 ta 36318331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 7783030 - 7782934
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaaggga 152  Q
    ||||||||||| ||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| |||||||||||||||    
T  7783030 taaaacaacatctaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaatgaaggga 7782934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 35531447 - 35531555
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  ||||||| |||| | ||||||| ||| ||| ||||||| | ||    
T  35531447 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 35531546  T
Q  150 ggagtataa 158  Q
    |||||||||    
T  35531547 ggagtataa 35531555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 27687874 - 27687839
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtat 52  Q
    ||||||||||||||||||||| ||||||||||||||    
T  27687874 tcaattatttcttataataagaaccggagggagtat 27687839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 50825724 - 50825835
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||  || |||| |||||||||  |||| |||| ||| |||||||| ||| | ||||||  ||| ||| ||||||| | ||    
T  50825724 tattggtaaaacaacatttaatattgcattaaactttgaaagtgacagttaagtaagaacaaaaaatttcttcaaaagagacacttaaaaaggaacggag 50825823  T
Q  150 ggagtataattt 161  Q
    ||||||| ||||    
T  50825824 ggagtattattt 50825835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 11248859 - 11248805
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaa 111  Q
    |||||||||||||||| ||||||  ||||||||| ||||| ||||||| ||||||    
T  11248859 aaaacaacatttaatgttgtattgaactttgaaagcgacacttaattagaaacaa 11248805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 19455551 - 19455644
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| |||||||||||||||||| || |||  |||||||||  ||||||||| |  ||||||||| ||| | ||||||| ||| |||||||||||    
T  19455551 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaattgaaacaaaaa-tttctccaaaagtgacacttataaaggaa 19455644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 19998437 - 19998407
Alignment:
Q  24 tttcttataataaggaccggagggagtattt 54  Q
    |||||||||||||||||||||||||||||||    
T  19998437 tttcttataataaggaccggagggagtattt 19998407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 1039524 - 1039625
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    |||||||||||||||||| || |||| |||||||||  |||| |||| ||| ||||||  |||| |  ||| || ||||||| ||||||| | |||||||    
T  1039524 gtaaaacaacatttaatgttgcattaaactttgaaagtgacagttaaataagaacaaattttttctctaaaggtgacaattaaaaaggaacggagggagt 1039623  T
Q  155 at 156  Q
    ||    
T  1039624 at 1039625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 1046430 - 1046531
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    |||||||||||||||||| || |||| |||||||||  |||| |||| ||| ||||||  |||| |  ||| || ||||||| ||||||| | |||||||    
T  1046430 gtaaaacaacatttaatgttgcattaaactttgaaagtgacagttaaataagaacaaattttttctctaaaggtgacaattaaaaaggaacggagggagt 1046529  T
Q  155 at 156  Q
    ||    
T  1046530 at 1046531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 8973616 - 8973697
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||||||  |||  ||||||||||| ||| ||||||| |||||||| ||| ||| ||||   |||||||||||||||    
T  8973616 acatttaatgatacattgaactttgaaaacaacagttaattagaaacaaaattttgatgtaaaaaagacaattataaaggaa 8973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 15699490 - 15699461
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  15699490 tttcttataataaggaccggagggagtatt 15699461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 28679106 - 28679001
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| ||||  || ||||||| |||| | ||||||| ||| ||| ||||||| | ||    
T  28679106 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaacaagaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 28679007  T
Q  150 ggagta 155  Q
    ||||||    
T  28679006 ggagta 28679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 30702442 - 30702547
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||| | || |||  |||||||||  || | |||| | |||||||||| ||||||||||||  ||| ||| ||||||||  ||    
T  30702442 tattggtaaaacaacatttaacgttgcattgaactttgaaagtgagatttaaattaaaacaaaaaatttatgcaaaagaaacacttaaaaaggaattgag 30702541  T
Q  150 ggagta 155  Q
    ||||||    
T  30702542 ggagta 30702547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 38569777 - 38569866
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||| |||||||||||| |||| |||||||||||  | | ||||||  |||||||  || |||| |||| | |||||||||||||||    
T  38569777 gtaaaaccacatttaatgatatattggactttgaaaataatatttaattggaaacaaattttgtatgtaaaattgacaattataaaggaa 38569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 50152513 - 50152424
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||| || |||  |||||||||   | | ||||||| ||||||||  ||||||||||||  ||||||| |||||||    
T  50152513 gtaaaacaacatttaatgttgcattgaactttgaaagtaaaagttaattagaaacaaaacatttatgcaaaagcgacaattaaaaaggaa 50152424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 51590552 - 51590581
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  51590552 tttcttataataaggaccggagggagtatt 51590581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 52030905 - 52030872
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagg 46  Q
    |||||||||| |||||||||||||||||||||||    
T  52030905 aaaatcaattttttcttataataaggaccggagg 52030872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 13321825 - 13321865
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||| | |||||||||||||||||| |||||||||||    
T  13321825 aaaatcaaatgtttcttataataaggaccagagggagtatt 13321865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 26760284 - 26760324
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||||| ||||||||||  ||||||||||||||||||    
T  26760284 aaaatcaattttttcttataaataggaccggagggagtatt 26760324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 48565649 - 48565677
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  48565649 tttcttataataaggaccggagggagtat 48565677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 51590472 - 51590428
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| ||| |||||| ||| |||||||||||||||||||||||||    
T  51590472 ccaaaaaagtcaattgttttttataataaggaccggagggagtat 51590428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 29125982 - 29125882
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||| ||||||||| ||| ||| |||||||||||||||| |||||||||||||||  |||||||||||||| ||| ||||||||||| | |||||||    
T  29125982 gtaaaaccacatttaataatgcattggactttgaaaacgacagttaattaaaaacaaattttttatgcaaaagtgacatttataaaggaacggagggagt 29125883  T
Q  155 a 155  Q
    |    
T  29125882 a 29125882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 41890602 - 41890513
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||| || |||  |||||||||  |||| ||||||| ||||||||| ||||||||||||| ||||||| |||||||    
T  41890602 gtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaaatttatgcaaaagtgacaattaaaaaggaa 41890513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 42352819 - 42352734
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaa 140  Q
    ||||||||||||||||||||||| |  ||||| |||| || | |||||||||||||||  |||||||||||||| |||||||||||    
T  42352819 gtaaaacaacatttaatgatgtaatgaactttaaaaatgagagttaattaaaaacaaattttttatgcaaaagtgacaattataaa 42352734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 11163344 - 11163257
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||||||||  |||||||||||| ||||||| |||||||    
T  11163344 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaaattatgcaaaagtgacaattaaaaaggaa 11163257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 38074354 - 38074267
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||| |||||||||  |||| ||||||| ||||||||| ||| | ||||||| ||||||| |||||||    
T  38074354 aaaacaacatttaatgttgtattaaactttgaaagtgacagttaattagaaacaaaaaatttctacaaaagtgacaattaaaaaggaa 38074267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 3720765 - 3720660
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||||| ||||||| ||||||| ||||||| | ||    
T  3720765 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttattcaaaagtgacaattaaaaaggaacggag 3720666  T
Q  150 ggagta 155  Q
    ||||||    
T  3720665 ggagta 3720660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 9550146 - 9550105
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtattt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  9550146 aaaatcaattatttcttataataaagaccggagggagtattt 9550105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 11993978 - 11993873
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||| |||||||||  |||| |||| || |||||||| |||| | ||||||| ||| ||| ||||||||| |     
T  11993978 tattggtaaaacaacatttaatgttgcattaaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaatggat 11993879  T
Q  150 ggagta 155  Q
    ||||||    
T  11993878 ggagta 11993873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 27193221 - 27193313
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||  |||  ||||||||||| ||||||||||  |||||||  || ||| ||||||| ||||||||||||||| | ||||||||    
T  27193221 acatttaatgataaattgaactttgaaaacaacaattaattggaaacaaattttgtatacaaaagtgacaattataaaggaacggagggagta 27193313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 34604887 - 34604931
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  34604887 ccaaaaaaatcaattgtttcttataataaggaccggagggagtat 34604931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 6661031 - 6660924
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| |  |||  |||||||||  |||| ||||||| |||||||||  ||||| |||||| ||| ||||||||||| | ||||||||     
T  6661031 aaaacaacatttaatgttacattgaactttgaaagtgacacttaattagaaacaaaaaaattatgtaaaagtgacagttataaaggaacggagggagtac 6660932  T
Q  157 aatttaat 164  Q
    ||| ||||    
T  6660931 aatataat 6660924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 6741433 - 6741326
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| |  |||  |||||||||  |||| ||||||| |||||||||  ||||| |||||| ||| ||||||||||| | ||||||||     
T  6741433 aaaacaacatttaatgttacattgaactttgaaagtgacacttaattagaaacaaaaaaattatgtaaaagtgacagttataaaggaacggagggagtac 6741334  T
Q  157 aatttaat 164  Q
    ||| ||||    
T  6741333 aatataat 6741326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 23429994 - 23429887
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||    
T  23429994 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggag 23429895  T
Q  150 ggagtata 157  Q
    ||||||||    
T  23429894 ggagtata 23429887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 11727636 - 11727562
Alignment:
Q  82 actttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    ||||||||||||||| ||||||  |||||||  || ||||||||| | ||||||||||| ||||| |||||||||    
T  11727636 actttgaaaacgacagttaattggaaacaaattttatatgcaaaaatgacaattataaaagaatggagggagtat 11727562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 34745299 - 34745253
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtattt 54  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||    
T  34745299 ccaaaaaagtcaattgtttcttataataaggaccggagggagtattt 34745253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 167632 - 167744
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| | ||||||||| |||| | ||||||| ||| ||| |||| || | ||    
T  167632 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaattaaaacaaaatttttctccaaaagtgacacttaaaaagaaacggag 167731  T
Q  150 ggagtataattta 162  Q
    ||||||| |||||    
T  167732 ggagtatcattta 167744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 7548539 - 7548491
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtatttgt 56  Q
    |||| ||||| |||| |||||||||||||||||||||||||||| ||||    
T  7548539 ccaaaaaaattaattgtttcttataataaggaccggagggagtaattgt 7548491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 33935215 - 33935319
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| ||||||||| |||||||| || |||| |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||    
T  33935215 tattggtaaaacaatatttaatgttgcattaaactttgaaagtgacagttaaataggaacaaaaattttcttcaaaagtaacacttaaaaaggaacggag 33935314  T
Q  150 ggagt 154  Q
    |||||    
T  33935315 ggagt 33935319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 43292610 - 43292566
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||    
T  43292610 ccaaaaaagtcaattgtttcttataataaggaccggagggagtat 43292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 43932082 - 43932046
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||| ||||||||||||||||||||||||||||||    
T  43932082 tcaattgtttcttataataaggaccggagggagtatt 43932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 43932164 - 43932200
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||| ||||||||||||||||||||||||||||||    
T  43932164 tcaattgtttcttataataaggaccggagggagtatt 43932200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 7548609 - 7548648
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  7548609 aaaatcaactttttcttataataaggaccggagggagtat 7548648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 31028739 - 31028648
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaag 141  Q
    |||| |||||||||||||||||| || |||  ||||| |||  |||| |||| ||||||||||||||||    |||||| ||||||||||||    
T  31028739 tattggtaaaacaacatttaatgttgcattgaacttttaaagtgacagttaaataaaaacaaaaattttccctaaaagtgacaattataaag 31028648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 14263629 - 14263524
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  ||||| |||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||    
T  14263629 tattggtaaaacaacatttaatgttgcattgaacttttaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggag 14263530  T
Q  150 ggagta 155  Q
    ||||||    
T  14263529 ggagta 14263524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 34604807 - 34604778
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  34604807 tttcttataataaggaccggagggagtatt 34604778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 35584000 - 35584033
Alignment:
Q  19 aattatttcttataataaggaccggagggagtat 52  Q
    |||| |||||||||||||||||||||||||||||    
T  35584000 aattgtttcttataataaggaccggagggagtat 35584033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 9301705 - 9301790
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||  | ||| |||  |||| ||||||| ||||||||| ||  ||||||||| ||||||| |||||||    
T  9301705 aaaacaacatttaatgttgtattgaaatttaaaagtgacagttaattagaaacaaaaaatt--tgcaaaagtgacaattaaaaaggaa 9301790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 13831997 - 13832025
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  13831997 tttcttataataaggaccggagggagtat 13832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 35794648 - 35794676
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  35794648 tttcttataataaggaccggagggagtat 35794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 45317730 - 45317630
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| |  |||  |||||||||  |||| ||||||  |||||||||  || || |||||| ||| ||||||||||| | |||||||||    
T  45317730 aaaacaacatttaatgttacattgaactttgaaagtgacagttaattggaaacaaaaaaattctgtaaaagtgacagttataaaggaacggagggagtat 45317631  T
Q  157 a 157  Q
    |    
T  45317630 a 45317630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 4609084 - 4608984
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| ||||||  |||||||||  |||| |||||||||||||||||  |||||||||||| ||||||| ||||||||| |||||||||    
T  4609084 aaaacaacatttaatgttgtattgaactttgaaagtgacacttaattaaaaacaaaaaaattatgcaaaagtgacaattaaaaaggaatggagggagtat 4608985  T
Q  157 a 157  Q
    |    
T  4608984 a 4608984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 40927215 - 40927112
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||| ||||||||||||  |||  | ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| | | |||||    
T  40927215 gtaaaaccacatttaatgatacattgaattttgaaaacgacaattaattagaaacaaaatttttatgcaaaagtgacaattataaaggaacggatggagt 40927116  T
Q  155 ataa 158  Q
    ||||    
T  40927115 ataa 40927112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 21157695 - 21157606
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||| || |||  |||||||||  |||| ||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  21157695 gtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaattttatgcaaaagtgacaattaaaaaggaa 21157606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 11413686 - 11413776
Alignment:
Q  54 tgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||||||||||||| || |||  |||||||||  || | ||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  11413686 tgtaaaacaacatttaatgttgcattgaactttgaaagtgatagttaattaaaaacaaaaaatttatgcaaaagtgacaattaaaaaggaa 11413776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 18393130 - 18393228
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||||||||  |||||||||||| ||||||| ||||||||  ||||||||    
T  18393130 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaaattatgcaaaagtgacaattaaaaaggaatagagggagta 18393228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 21150554 - 21150465
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||| || |||  |||||||||  |||| ||||||| ||||||||| ||||||||||||| ||||||| |||||||    
T  21150554 gtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaaatttatgcaaaagtgacaattaaaaaggaa 21150465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 10359387 - 10359478
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaag 141  Q
    |||| |||||||||||||||||| || |||  |||||||||| |||| |||| || ||||||||||||| | ||||||||||| ||||||||    
T  10359387 tattggtaaaacaacatttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaattttctccaaaagttacagttataaag 10359478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 18676572 - 18676659
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||| || |||  |||||||||  ||||  |||||||||||||||| ||||||||||||| ||||||| |||||||    
T  18676572 gtaaaacaacatttaatgttgcattgaactttgaaagtgaca--taattaaaaacaaaaaatttatgcaaaagtgacaattaaaaaggaa 18676659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 18794850 - 18794743
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| || ||||||||| ||| | ||||||| ||| ||| ||||||||| ||    
T  18794850 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaatggag 18794751  T
Q  150 ggagtata 157  Q
    ||||||||    
T  18794750 ggagtata 18794743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 8849304 - 8849376
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaatt 135  Q
    ||||||||||||  |||  ||||||||||||| | ||||||| ||||||||| ||||||||||||| ||||||    
T  8849304 acatttaatgatacattgaactttgaaaacgatagttaattagaaacaaaaaatttatgcaaaagtgacaatt 8849376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 24173457 - 24173418
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  24173457 aaaatcaattatttcttataataaggactggagggagtat 24173418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 25785967 - 25785880
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||| |||| ||| |||| |||| ||||||| |||||||    
T  25785967 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaactaaaaatttctgcagaagtgacaattaaaaaggaa 25785880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 6007944 - 6007856
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||||| |||  |||||||||  |||| |||| || ||||||||| ||| | ||||||| ||| ||| |||||||    
T  6007944 taaaacaacatttaatgatgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaa 6007856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 7537127 - 7537171
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||    
T  7537127 ccaaaaaaatcaattgttttttataataaggaccggagggagtat 7537171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 28463542 - 28463642
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||||||||||| || || |||  |||||||||  |||| |||| |||||||||||| ||| | ||||||| ||| ||| ||||||| | |||||||    
T  28463542 gtaaaacaacatttattgttgcattgaactttgaaagtgacagttaaataaaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagt 28463641  T
Q  155 a 155  Q
    |    
T  28463642 a 28463642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 29452003 - 29452043
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  29452003 aaaatcaattgtttcttataataaggatcggagggagtatt 29452043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 4175638 - 4175737
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||||||||    
T  4175638 taaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 4175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 10889246 - 10889349
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  ||||| |||| |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||    
T  10889246 tattggtaaaacaacatttaatgttgcattgaactttaaaaatgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggag 10889345  T
Q  150 ggag 153  Q
    ||||    
T  10889346 ggag 10889349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 29451930 - 29451891
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  29451930 aaaatcaactttttcttataataaggaccggagggagtat 29451891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 30132873 - 30132838
Alignment:
Q  19 aattatttcttataataaggaccggagggagtattt 54  Q
    |||| |||||||||||||||||||||||||||||||    
T  30132873 aattttttcttataataaggaccggagggagtattt 30132838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 7579820 - 7579926
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||| ||||  |||| |||| || ||||||||| ||| | ||||||| ||| ||| ||||||| | ||    
T  7579820 tattggtaaaacaacatttaatgttgcattgaacttcgaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggag 7579919  T
Q  150 ggagtat 156  Q
    |||||||    
T  7579920 ggagtat 7579926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 13932576 - 13932610
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagta 51  Q
    ||||||||||||||||||||||||| |||||||||    
T  13932576 tcaattatttcttataataaggaccagagggagta 13932610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 19211306 - 19211276
Alignment:
Q  24 tttcttataataaggaccggagggagtattt 54  Q
    |||||||||||||||||||||||||||||||    
T  19211306 tttcttataataaggaccggagggagtattt 19211276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 27600869 - 27600907
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagta 51  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  27600869 aaaatcaattatttcttataataaggatcggatggagta 27600907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 34261379 - 34261273
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||| | || |||  |||||||||  |||| |||| || ||||||||||||| ||||||| | ||| ||| ||| ||||| ||    
T  34261379 tattggtaaaacaacatttaacgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttctgcaaaattgacacttaaaaaagaatggag 34261280  T
Q  150 ggagtat 156  Q
    | |||||    
T  34261279 gaagtat 34261273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 38363258 - 38363164
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| |||||||    
T  38363258 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtaacacttaaaaaggaa 38363164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 5355673 - 5355702
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  5355673 tttcttataataaggaccggagggagtatt 5355702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 6330853 - 6330773
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaa-attttatgcaaaagttacaatta 136  Q
    |||||||||||||||| | ||||| |||||||||| ||||||| | || || |||||  |||||| ||||||| |||||||    
T  6330853 aaaacaacatttaatgttatattaaactttgaaaatgacaattgaatataatcaaaattttttattcaaaagtaacaatta 6330773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 7537054 - 7537018
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||| |||||||||||||| |||||||||||||||    
T  7537054 tcaattttttcttataataagaaccggagggagtatt 7537018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 20502193 - 20502233
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggaggga 48  Q
    |||| ||||| |||| |||||||||||||||||||||||||    
T  20502193 ccaaaaaaattaattgtttcttataataaggaccggaggga 20502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 30132905 - 30132937
Alignment:
Q  19 aattatttcttataataaggaccggagggagta 51  Q
    |||| ||||||||||||||||||||||||||||    
T  30132905 aattgtttcttataataaggaccggagggagta 30132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 38865984 - 38865898
Alignment:
Q  58 aaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||||||| ||||||||||| |||| | ||||| |||||||| |||||| ||||||| |||||||||||||||    
T  38865984 aaacaacatttaatgatgtattggactttgaaaatgacagtgaattagaaacaaaatttttatacaaaagtgacaattataaaggaa 38865898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 6150775 - 6150677
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||||||||  |||||||||||| ||||||| ||||||||| ||||||||    
T  6150775 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaaattatgcaaaagtgacaattaaaaaggaatggagggagta 6150677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 48510038 - 48510131
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    ||||||||||||  |||  ||||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||| || | |||||||||    
T  48510038 acatttaatgatacattgaactttgaaaacgacagttaattaaaaacaaaatctttatgcaaaagtgacaattataaagaaacggagggagtat 48510131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 55430464 - 55430564
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||| ||||||||||||  | |  ||||||||||||||| ||||||| |||||||  |||||||||||||| ||||||||||||||| | |||||||    
T  55430464 gtaaaaccacatttaatgatacaatgaactttgaaaacgacagttaattagaaacaaattttttatgcaaaagtgacaattataaaggaacggagggagt 55430563  T
Q  155 a 155  Q
    |    
T  55430564 a 55430564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 41813725 - 41813623
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    |||||||||||||||||  || |||  |||||||||  |||| ||||||| ||||||||||||||||||||||| ||||||| ||||||| | ||| |||    
T  41813725 gtaaaacaacatttaatattgcattgaactttgaaagtgacacttaattagaaacaaaaattttatgcaaaagtaacaattaaaaaggaacggaggtagt 41813626  T
Q  155 ata 157  Q
    |||    
T  41813625 ata 41813623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 39309014 - 39308912
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||| ||||||||||||  |||  ||||| ||||  ||| ||||||| ||||||||||||||||||||| | | |||||||||||||  ||||||||    
T  39309014 gtaaaactacatttaatgatacattgtactttaaaaattacagttaattagaaacaaaaattttatgcaaaaatgataattataaaggaacaaagggagt 39308915  T
Q  155 ata 157  Q
    |||    
T  39308914 ata 39308912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 37551830 - 37551927
Alignment:
Q  59 aacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||| ||||||  |||||||||  |||| ||||||| ||||||||| ||| | ||||||| ||||||| ||||||| | |||||||||    
T  37551830 aacaacatttaatgttgtattgaactttgaaagtgacacttaattagaaacaaaaaatttctacaaaagtgacaattaaaaaggaacggagggagtat 37551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 47428617 - 47428512
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  ||||||||| ||||| |||| ||  ||||||| |||| | ||||||| ||| ||||||||||||| ||    
T  47428617 tattggtaaaacaacatttaatgttgcattgaactttgaaagcgacagttaaataggaacaaaatttttctccaaaagtgacacttataaaggaatggag 47428518  T
Q  150 ggagta 155  Q
    ||||||    
T  47428517 ggagta 47428512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 56486467 - 56486383
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaa 140  Q
    |||| |||||||||||||||||||  |||||||||| |||||||||||| ||  ||||||| ||||||||| ||||  |||||||    
T  56486467 taaaccaacatttaatgatgtattgaactttgaaaatgacaattaattagaataaaaaattgtatgcaaaaattactgttataaa 56486383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 56499777 - 56499848
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagt 128  Q
    |||||||||||||||| ||||||| |||||||||  |||| ||||||| ||||||||| ||| |||||||||    
T  56499777 aaaacaacatttaatgttgtattaaactttgaaagtgacagttaattagaaacaaaaaatttctgcaaaagt 56499848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 43888064 - 43887964
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||| |||||||||||  |||||||||  ||||||||| ||  |||||||| |||||  |||||| ||||||| ||||||| | ||||||||    
T  43888064 taaaacaacatt-aatgatgtattgaactttgaaagtgacaattaaataggaacaaaaaatttatctaaaagtgacaattaaaaaggaacggagggagta 43887966  T
Q  156 ta 157  Q
    ||    
T  43887965 ta 43887964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 1181064 - 1181152
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaac-aaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||| |||||||||  ||||  |||||| |||| ||||| ||| ||||||||| ||||||| |||||||    
T  1181064 aaaacaacatttaatgttgtattaaactttgaaagtgacaggtaattagaaacaaaaaaatttctgcaaaagtgacaattaaaaaggaa 1181152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 34925504 - 34925576
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagt 128  Q
    ||||||||||||||||| | ||||  | |||||||  |||||||||||||||||||||| ||| |||||||||    
T  34925504 taaaacaacatttaatgttatattgaattttgaaagtgacaattaattaaaaacaaaaaatttctgcaaaagt 34925576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 36196476 - 36196516
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  36196476 aaaatcaattttttcttataataaggaccggagggagtatt 36196516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 36408805 - 36408705
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||||||| || |||  ||||||||||  |||||||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||||||||    
T  36408805 taaaacaacatttaatgttgcattgaactttgaaaattacaattaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 36408706  T
Q  156 t 156  Q
    |    
T  36408705 t 36408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 36422971 - 36422871
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||||||| || |||  ||||||||||  |||||||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||||||||    
T  36422971 taaaacaacatttaatgttgcattgaactttgaaaattacaattaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 36422872  T
Q  156 t 156  Q
    |    
T  36422871 t 36422871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 43556728 - 43556688
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  43556728 aaaatcaattgtttcttataataaggaccggagggagtatt 43556688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 36196407 - 36196364
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagta 51  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  36196407 ccaaaaaaatcaattgtttcttataataaggaccggagggagta 36196364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 4418208 - 4418246
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagta 51  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4418208 aaaatcaattttttcttataataaggaccggagggagta 4418246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 20294365 - 20294267
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||| |||||||| ||||||  |||||||||  || | ||||||| |||||||||  |||||||||||| ||||||| |||| || | ||||||||    
T  20294365 aaaacaagatttaatgttgtattgaactttgaaagtgatagttaattagaaacaaaaaaattatgcaaaagtgacaattaaaaagaaacggagggagta 20294267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 25756745 - 25756711
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagta 51  Q
    |||||||||||||||||||||||||||||||||||    
T  25756745 tcaattatttcttataataaggaccggagggagta 25756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 34603705 - 34603607
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||| |  |||  |||||||||  |||| ||||||| ||||||||| ||| || |||||| ||| ||||||||||| | ||||||||    
T  34603705 aaaacaacatttaatgttacattgaactttgaaagtgacagttaattagaaacaaaaaatttctgtaaaagtgacagttataaaggaacggagggagta 34603607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 42160010 - 42159972
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagta 51  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  42160010 aaaatcaattatttcttataataaggaccggagtgagta 42159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 48087779 - 48087681
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||| |  |||  |||||||||  || | ||||||||||||||||| |||| | |||||| ||| ||||||||||| | ||||||||    
T  48087779 aaaacaacatttaatgttacattgaactttgaaagtgagagttaattaaaaacaaaaaatttaagtaaaagtgacagttataaaggaacggagggagta 48087681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 3802243 - 3802142
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||||| |||||||| |  |||  |||||||||  |||  ||||||| ||||||||| ||||||||||| | ||||||| ||||||| | |||||||    
T  3802243 gtaaaacaatatttaatgttacattgaactttgaaagtgacggttaattagaaacaaaaaatttatgcaaaaatgacaattaaaaaggaacggagggagt 3802144  T
Q  155 at 156  Q
    ||    
T  3802143 at 3802142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 12252188 - 12252083
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| ||||||| | ||    
T  12252188 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttcttcaaaagtgacacttaaaaaggaacggag 12252089  T
Q  150 ggagta 155  Q
    ||||||    
T  12252088 ggagta 12252083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 30152017 - 30152090
Alignment:
Q  82 actttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||  |||| ||||||| ||||||||| |||||| |||||| ||| ||||||||||||| ||| ||||    
T  30152017 actttgaaagtgacacttaattagaaacaaaaaatttatgtaaaagtgacagttataaaggaatggaggtagta 30152090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 51655041 - 51655122
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||||||  ||| |||||||||||||| | ||||||  |||||||  || |||| |||||| |||||||||||||||    
T  51655041 acatttaatgatacattggactttgaaaacgagagttaattggaaacaaattttgtatgtaaaagtgacaattataaaggaa 51655122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 13629349 - 13629457
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||| | ||||||| ||| ||| ||||||| | ||    
T  13629349 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggag 13629448  T
Q  150 ggagtataa 158  Q
    |||||||||    
T  13629449 ggagtataa 13629457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 50623502 - 50623394
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  ||||||||| || |||||||  |||| | | ||||| ||| ||| ||||||| | ||    
T  50623502 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaatagaaacaaattttttctcctaaagtgacacttaaaaaggaacggag 50623403  T
Q  150 ggagtataa 158  Q
    |||||||||    
T  50623402 ggagtataa 50623394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 5813684 - 5813715
Alignment:
Q  20 attatttcttataataaggaccggagggagta 51  Q
    ||||||||||||||||||||||||||||||||    
T  5813684 attatttcttataataaggaccggagggagta 5813715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 14949247 - 14949334
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| |  |||  |||||||||  |||| ||||||| |||||||||  ||| | |||||| |||||||||||||||    
T  14949247 aaaacaacatttaatgttacattgaactttgaaagtgacacttaattagaaacaaaaaaattacgtaaaagtgacaattataaaggaa 14949334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 25756827 - 25756862
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtat 52  Q
    |||||| |||||||||||||||||||||||||||||    
T  25756827 tcaattgtttcttataataaggaccggagggagtat 25756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 25874806 - 25874849
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagta 51  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||    
T  25874806 ccaaaaaaattaattctttcttataataaggaccggagggagta 25874849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 29686511 - 29686550
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtat 52  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  29686511 aaaattaattgtttcttataataaggaccggagggagtat 29686550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 32193517 - 32193474
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagta 51  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||    
T  32193517 ccaaaaaagtcaattgtttcttataataaggaccggagggagta 32193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 37895297 - 37895254
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagta 51  Q
    |||| |||||||| | ||||||||||||||||||||||||||||    
T  37895297 ccaaaaaaatcaactgtttcttataataaggaccggagggagta 37895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 3436223 - 3436329
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  ||||||| |||| | ||||||| ||| ||| ||||||| | ||    
T  3436223 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 3436322  T
Q  150 ggagtat 156  Q
    |||||||    
T  3436323 ggagtat 3436329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 4418134 - 4418100
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggaggg 47  Q
    |||||||||| ||||||||||||||||||||||||    
T  4418134 aaaatcaattgtttcttataataaggaccggaggg 4418100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 6767366 - 6767428
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaatttt 118  Q
    |||||||| ||||||||| ||  |||||||| |||| |||| |||||||||||||||| ||||    
T  6767366 taaaacaaaatttaatgaggttatagactttaaaaatgacagttaattaaaaacaaaattttt 6767428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 33622911 - 33622877
Alignment:
Q  19 aattatttcttataataaggaccggagggagtatt 53  Q
    |||| ||||||||||||||||||||||||||||||    
T  33622911 aattgtttcttataataaggaccggagggagtatt 33622877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 33809175 - 33809081
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| ||||||||||||||| |  || |||| ||||||||   |||| |||| ||| |||||||||||| | ||||||| ||||||| |||||||    
T  33809175 tattggtaaaacaacatttactattgcattaaactttgaatgtgacagttaaataagaacaaaaattttctccaaaagtgacaattaaaaaggaa 33809081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 46872009 - 46871915
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||||| ||||||| ||| ||| |||||||    
T  46872009 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttatccaaaagtgacacttaaaaaggaa 46871915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 48782288 - 48782182
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||||| ||||||| ||| ||| |||| || | ||    
T  48782288 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttatccaaaagtgacacttaaaaagaaacggag 48782189  T
Q  150 ggagtat 156  Q
    |||||||    
T  48782188 ggagtat 48782182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 1205193 - 1205234
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtattt 54  Q
    |||||||||| ||||||||||||| || ||||||||||||||    
T  1205193 aaaatcaattttttcttataataaagatcggagggagtattt 1205234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 19527364 - 19527469
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| |||| || | ||    
T  19527364 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggag 19527463  T
Q  150 ggagta 155  Q
    ||||||    
T  19527464 ggagta 19527469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 29686426 - 29686397
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  29686426 tttcttataataaggaccggagggagtatt 29686397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 31862142 - 31862247
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||  ||| ||| ||||||| | ||    
T  31862142 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagagacacttaaaaaggaacggag 31862241  T
Q  150 ggagta 155  Q
    ||||||    
T  31862242 ggagta 31862247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 33755238 - 33755343
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| ||||  | ||| ||||||||| |  |||||| ||| ||| ||||||| ||||    
T  33755238 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaagagaaataaaaattttctctaaaagtgacacttaaaaaggaacgaag 33755337  T
Q  150 ggagta 155  Q
    ||||||    
T  33755338 ggagta 33755343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 37895377 - 37895406
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  37895377 tttcttataataaggaccggagggagtatt 37895406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 38617463 - 38617568
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||| |||| |||| ||  |||||||  ||| | ||||||| ||| ||| ||||||| | ||    
T  38617463 tattggtaaaacaacatttaatgttgcattgaactttgaaaatgacagttaaataggaacaaaatatttctccaaaagtgacacttaaaaaggaacggag 38617562  T
Q  150 ggagta 155  Q
    ||||||    
T  38617563 ggagta 38617568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 49
Target Start/End: Original strand, 18838949 - 18838977
Alignment:
Q  21 ttatttcttataataaggaccggagggag 49  Q
    |||||||||||||||||||||||||||||    
T  18838949 ttatttcttataataaggaccggagggag 18838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 24100790 - 24100758
Alignment:
Q  19 aattatttcttataataaggaccggagggagta 51  Q
    ||||||||||||||||||||| |||||||||||    
T  24100790 aattatttcttataataaggatcggagggagta 24100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 35381571 - 35381635
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaa 114  Q
    |||| |||||||||||||||||| || |||  |||||||||  ||||||||| || |||||||||    
T  35381571 tattagtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaatagaaacaaaaa 35381635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 35877340 - 35877312
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  35877340 tttcttataataaggaccggagggagtat 35877312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 161
Target Start/End: Original strand, 38009929 - 38010033
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||| | |  |||  |||||||||  |||| ||||||  |||||||||  ||||| |||||| ||| ||||||||||| | |||||||||    
T  38009929 aaaacaacatttaaagttacattgaactttgaaagtgacagttaattggaaacaaaaaaattatgtaaaagtgacagttataaaggaacggagggagtat 38010028  T
Q  157 aattt 161  Q
     ||||    
T  38010029 tattt 38010033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 44069113 - 44069013
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||||||| || |||  |||||||||  |||| |||| ||  ||||||| |||| | ||||||| ||| ||| ||||||| | ||||||||    
T  44069113 taaaacaacatttaatgttgcattgaactttgaaagtgacacttaaataggaacaaaatttttctacaaaagtgacacttaaaaaggaacggagggagta 44069014  T
Q  156 t 156  Q
    |    
T  44069013 t 44069013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 52136730 - 52136698
Alignment:
Q  19 aattatttcttataataaggaccggagggagta 51  Q
    |||| ||||||||||||||||||||||||||||    
T  52136730 aattttttcttataataaggaccggagggagta 52136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 53691816 - 53691904
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||||||||||||||||||  |||||||||  |||| |||| |   |||||||| ||| |  |||||| ||||||| |||||||    
T  53691816 taaaacaacatttaatgatgtattgaactttgaaagtgacagttaaattggaacaaaaaatttctctaaaagtgacaattaaaaaggaa 53691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 54864090 - 54864062
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  54864090 tttcttataataaggaccggagggagtat 54864062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 26748433 - 26748333
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    ||||||| ||||||||||||  ||| |||||||||||||||| |||||| ||||||||  || ||||||||||| ||||||||||||||| | |||||||    
T  26748433 gtaaaaccacatttaatgatacattggactttgaaaacgacagttaattgaaaacaaattttgtatgcaaaagtgacaattataaaggaacggagggagt 26748334  T
Q  155 a 155  Q
    |    
T  26748333 a 26748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 34750727 - 34750646
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||||||  |||  ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  34750727 acatttaatgatacattgaactttgaaaacgacagttaattagaaacaaaatttttatgcaaaagtgacaattataaaggaa 34750646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 23771367 - 23771278
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||||| |||||||| || |||  |||||||||  |||| ||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  23771367 gtaaaacaatatttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaattttatgcaaaagtgacaattaaaaaggaa 23771278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 2642790 - 2642701
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||||| || |||  |||||||||  |||| ||||||| ||||||||| |||||||||| || ||||||| |||||||    
T  2642790 gtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaaatttatgcaaatgtgacaattaaaaaggaa 2642701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 19227414 - 19227458
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  19227414 ccaaaaaaatcaattgtttcttataataaggaccggagggagtat 19227458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 53703772 - 53703724
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtatttgt 56  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  53703772 ccaaaaaagtcaattgtttcttataataaggaccggagggagtatttgt 53703724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 790635 - 790529
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| || ||||| ||||||| | ||||||| ||| ||| ||||||| | ||    
T  790635 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaatagaaacataaattttctccaaaagtgacacttaaaaaggaacggag 790536  T
Q  150 ggagtat 156  Q
    |||||||    
T  790535 ggagtat 790529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 53284422 - 53284467
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||    
T  53284422 ccaaaaaaatcaattgtttcttataataaggaccggaggaagtatt 53284467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 54106348 - 54106243
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  ||||||| |||| | ||||||| ||| ||| ||||||||| ||    
T  54106348 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttcttcaaaagtgacacttaaaaaggaatggag 54106249  T
Q  150 ggagta 155  Q
    ||||||    
T  54106248 ggagta 54106243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 34266605 - 34266677
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagt 128  Q
    ||||||||||||||||| || |||  |||||||||| |||| |||| || ||||||||||||| | |||||||    
T  34266605 taaaacaacatttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaattttctccaaaagt 34266677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 28226505 - 28226418
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| |  |||  |||||||||  |||| ||||||| ||||||||| |||||| |||||  ||| |||||||||||    
T  28226505 aaaacaacatttaatgttacattgaactttgaaagtgacagttaattagaaacaaaaaatttatgtaaaagcgacagttataaaggaa 28226418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 2544470 - 2544436
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagta 51  Q
    |||||| ||||||||||||||||||||||||||||    
T  2544470 tcaattgtttcttataataaggaccggagggagta 2544436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 20848880 - 20848986
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  ||||||  |||| |  |||||| ||||||||||||||| | ||    
T  20848880 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaattttttctctaaaagtgacaattataaaggaacggag 20848979  T
Q  150 ggagtat 156  Q
    |||||||    
T  20848980 ggagtat 20848986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 31376201 - 31376171
Alignment:
Q  24 tttcttataataaggaccggagggagtattt 54  Q
    |||||||||||||||||||||||||||||||    
T  31376201 tttcttataataaggaccggagggagtattt 31376171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 35077465 - 35077367
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||| |  |||  |||||||||  |||| ||||||| |||||||||  || || |||||| ||| ||||||||||| | ||||||||    
T  35077465 aaaacaacatttaatgttacattgaactttgaaagtgacagttaattagaaacaaaaaaattctgtaaaagtgacagttataaaggaacggagggagta 35077367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 43554475 - 43554381
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||||||| | ||||||| ||| ||| |||||||    
T  43554475 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaa 43554381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 46220403 - 46220365
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagta 51  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  46220403 aaaatcaattttttcttataataaggaccggatggagta 46220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 47844006 - 47844104
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||||||||||||||  |  |||  |||||||||  |||| ||||||| ||| ||||| |||||| |||||| ||| ||||||||||| | ||||||||    
T  47844006 aaaacaacatttaatattacattgaactttgaaagtgacagttaattagaaataaaaaatttatgtaaaagtgacagttataaaggaacggagggagta 47844104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 53290929 - 53291027
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    |||| ||||||||||| |  |||  |||||||||  |||| |||||||||||||||||  ||||| || ||| ||| ||||||||||| | ||||||||    
T  53290929 aaaataacatttaatgttacattgaactttgaaagtgacacttaattaaaaacaaaaaaattatgtaagagtgacagttataaaggaacggagggagta 53291027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 53745442 - 53745548
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||| | ||||||| ||| ||| ||||||| | ||    
T  53745442 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggag 53745541  T
Q  150 ggagtat 156  Q
    |||||||    
T  53745542 ggagtat 53745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 36234452 - 36234347
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||| | || |||  |||||||||  |||| |||| || ||||||||||||| | || |||| ||| ||| ||||||| | ||    
T  36234452 tattggtaaaacaacatttaacgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttcttcataagtgacacttacaaaggaacggag 36234353  T
Q  150 ggagta 155  Q
    ||||||    
T  36234352 ggagta 36234347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 39617017 - 39617062
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  39617017 ccaaaaaagtcaattgtttcttgtaataaggaccggagggagtatt 39617062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 47104316 - 47104421
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||| |  |||||| ||||||| ||||||| | ||    
T  47104316 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggag 47104415  T
Q  150 ggagta 155  Q
    ||||||    
T  47104416 ggagta 47104421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 8769255 - 8769283
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  8769255 tttcttataataaggaccggagggagtat 8769283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 25313315 - 25313275
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||||||||||| ||||||||||||||| || |||||||    
T  25313315 aaaatcaattattttttataataaggaccgaagagagtatt 25313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 31376281 - 31376325
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| ||| |||||| |||||| ||||||||||||||||||||||    
T  31376281 ccaaaaaagtcaattgtttcttgtaataaggaccggagggagtat 31376325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 35315217 - 35315153
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaa 114  Q
    |||| |||||||||||||||| | ||||||  |||||||||| ||||||||| || ||| |||||    
T  35315217 tattggtaaaacaacatttaaggttgtattgaactttgaaaatgacaattaaatagaaaaaaaaa 35315153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 39616937 - 39616905
Alignment:
Q  24 tttcttataataaggaccggagggagtatttgt 56  Q
    |||||||||||||||||||||||||||| ||||    
T  39616937 tttcttataataaggaccggagggagtagttgt 39616905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 45055272 - 45055232
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaa 90  Q
    |||| ||||||||||||||||||||| |||| |||||||||    
T  45055272 tattagtaaaacaacatttaatgatgcattaaactttgaaa 45055232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 45113856 - 45113884
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  45113856 tttcttataataaggaccggagggagtat 45113884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 53703853 - 53703881
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  53703853 tttcttataataaggaccggagggagtat 53703881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 32049485 - 32049394
Alignment:
Q  63 acatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||||||||  |||  ||||||||||||||||||||||| |||| |||||||||||||||| | |||||||||||| |||| ||||||||    
T  32049485 acatttaatgatacattgaactttgaaaacgacaattaattagaaac-aaaattttatgcaaaattcacaattataaagaaatggagggagta 32049394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 3178008 - 3177903
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtat 156  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||||||||  || || |||||| ||||||| ||||||| | |||||||||    
T  3178008 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaaattctgtaaaagtgacaattaaaaaggaacggagggagtat 3177909  T
Q  157 aattta 162  Q
    ||||||    
T  3177908 aattta 3177903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 46715466 - 46715554
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||| ||||||||||||  ||| |||||||||||||||| ||||||  |||||||  || ||||||||||| |||||||||||||||    
T  46715466 taaaaccacatttaatgatacattggactttgaaaacgacagttaattggaaacaaattttgtatgcaaaagtcacaattataaaggaa 46715554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 8966063 - 8966165
Alignment:
Q  55 gtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagt 154  Q
    |||||||||  ||||||| || |||  |||||||||  |||| ||||||| |||||||| |||||||||||||| ||||||| ||||||| | |||||||    
T  8966063 gtaaaacaatgtttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaatttttatgcaaaagtgacaattaaaaaggaacggagggagt 8966162  T
Q  155 ata 157  Q
    |||    
T  8966163 ata 8966165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 30586840 - 30586924
Alignment:
Q  56 taaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaa 140  Q
    |||| |||||||||||||||| || |||||| |||| || | ||||||  ||||||||| ||||||||||||| |||||||||||    
T  30586840 taaatcaacatttaatgatgtgttggactttaaaaatgaaagttaattggaaacaaaaaatttatgcaaaagtgacaattataaa 30586924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 35746802 - 35746910
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| ||||||  |||||||||  |||| |||| || ||| ||||||||| | ||||||| ||||||| ||||| | | ||    
T  35746802 tattggtaaaacaacatttaatgttgtattgaactttgaaagtgacatttaaatagaaataaaaattttctccaaaagtgacaattaaaaaggtacggag 35746901  T
Q  150 ggagtataa 158  Q
    |||||||||    
T  35746902 ggagtataa 35746910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 41487897 - 41487941
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  41487897 ccaaaaaaatcaattgtttcttataataaggaccggagggagtat 41487941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 41675344 - 41675452
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| |  |||  |||||||||  |||| ||||  || |||||||||||| ||||||||| ||| ||| ||||||| | ||    
T  41675344 tattggtaaaacaacatttaatgttacattgaactttgaaagtgacagttaaacaagaacaaaaattttctgcaaaagtgacacttaaaaaggaacggag 41675443  T
Q  150 ggagtataa 158  Q
    |||||||||    
T  41675444 ggagtataa 41675452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 26803595 - 26803682
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    ||||||| |||||||| ||||||  ||||| ||| ||||| |||||||||||||||||  || ||||||||| || |||| |||||||    
T  26803595 aaaacaatatttaatgttgtattgaactttaaaagcgacagttaattaaaaacaaaaaaattctgcaaaagtgactattaaaaaggaa 26803682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 9142453 - 9142526
Alignment:
Q  84 tttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtata 157  Q
    ||||||||||||| ||||||| || ||||| || |||  |||||| ||||||||||||||||| ||| ||||||    
T  9142453 tttgaaaacgacagttaattagaagcaaaatttatattaaaaagtgacaattataaaggaatggaggaagtata 9142526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 18470392 - 18470287
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||| |||||||| ||| | ||||||| ||| ||| ||||||| | ||    
T  18470392 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataagaacaaaaaatttctccaaaagtgacacttaaaaaggaacggag 18470293  T
Q  150 ggagta 155  Q
    ||||||    
T  18470292 ggagta 18470287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 24164558 - 24164518
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggaggga 48  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  24164558 ccaaaaaaatcaattgtttcttataataaggaccggaggga 24164518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 27320400 - 27320444
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  27320400 ccaaaaaaatcaattgtttcttataataaggaccagagggagtat 27320444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 45025636 - 45025592
Alignment:
Q  8 ccaagaaaatcaattatttcttataataaggaccggagggagtat 52  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||    
T  45025636 ccaaaaaaatcaattgtttcttataataaggaccggagtgagtat 45025592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 33071984 - 33071897
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| |  |||| |||||||||  |||| ||||||| |||||||||  || || |||||| ||| |||||||||||    
T  33071984 aaaacaacatttaatgttacattaaactttgaaagtgacagttaattagaaacaaaaaaattctgtaaaagtgacagttataaaggaa 33071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 33901075 - 33901037
Alignment:
Q  13 aaaatcaattatttcttataataaggaccggagggagta 51  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  33901075 aaaatcaattgtttcttataataaggacaggagggagta 33901037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 8921099 - 8921022
Alignment:
Q  82 actttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagtataat 159  Q
    |||||||||  |||| ||||||| |||||||||  ||||| |||||  ||| ||||||||||| | ||||||||||||    
T  8921099 actttgaaagtgacagttaattagaaacaaaaaaattatgtaaaagcgacagttataaaggaacggagggagtataat 8921022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 12806934 - 12806905
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  12806934 tttcttataataaggaccggagggagtatt 12806905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 31430644 - 31430539
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||| || |||  |||||||||  |||| |||| ||  |||||||| ||| | ||||||| ||| ||| ||||||| | ||    
T  31430644 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggag 31430545  T
Q  150 ggagta 155  Q
    ||||||    
T  31430544 ggagta 31430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 41487817 - 41487788
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  41487817 tttcttataataaggaccggagggagtatt 41487788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 48948973 - 48948936
Alignment:
Q  19 aattatttcttataataaggaccggagggagtatttgt 56  Q
    |||||||||||||||||||||||||||  |||||||||    
T  48948973 aattatttcttataataaggaccggagaaagtatttgt 48948936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 96224 - 96311
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| |||||||||  |||||||||||| ||||||| |||||||    
T  96224 aaaacaacatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaaattatgcaaaagtgacaattaaaaaggaa 96311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 252672 - 252574
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaagggagta 155  Q
    ||||||| |||||||| ||||||  |||||||||  |||| ||||||| |||||||||  |||||||||||| ||||||| ||||||| | ||||||||    
T  252672 aaaacaatatttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaaattatgcaaaagtgacaattaaaaaggaacggagggagta 252574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 23214 - 23130
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaag 141  Q
    |||||||||||||||| ||||||  |||||||||  |||| ||||||| ||||||||||||| | ||||| | ||||||| ||||    
T  23214 aaaacaacatttaatgttgtattgaactttgaaagtgacacttaattagaaacaaaaattttcttcaaaaatgacaattaaaaag 23130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 14413 - 14500
Alignment:
Q  57 aaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaa 144  Q
    |||||||||||||||| ||||||  |||||||||| |||  ||||||| ||| |||||  |||||||||||| ||||||  |||||||    
T  14413 aaaacaacatttaatgttgtattgaactttgaaaatgacgcttaattagaaataaaaaaattatgcaaaagtgacaatttaaaaggaa 14500  T

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Target: scaffold0767 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 3842 - 3807
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtat 52  Q
    |||||| |||||||||||||||||||||||||||||    
T  3842 tcaattgtttcttataataaggaccggagggagtat 3807  T

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Target: scaffold0280 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 8239 - 8161
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagt 128  Q
    |||| |||||||||||||||||| || |||  |||||||||| |||| |||| || ||||||||| ||| | |||||||    
T  8239 tattggtaaaacaacatttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaaatttcttcaaaagt 8161  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 40313 - 40342
Alignment:
Q  24 tttcttataataaggaccggagggagtatt 53  Q
    ||||||||||||||||||||||||||||||    
T  40313 tttcttataataaggaccggagggagtatt 40342  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 69185 - 69080
Alignment:
Q  50 tatttgtaaaacaacatttaatgatgtattagactttgaaaacgacaattaattaaaaacaaaaattttatgcaaaagttacaattataaaggaatgaag 149  Q
    |||| |||||||||||||||||  || |||  |||||||||  ||||||||| ||  |||||||||||| | ||||||| ||| ||| |||| || | ||    
T  69185 tattggtaaaacaacatttaatattgcattgaactttgaaagtgacaattaaataggaacaaaaattttcttcaaaagtgacacttaaaaagaaacggag 69086  T
Q  150 ggagta 155  Q
    ||||||    
T  69085 ggagta 69080  T

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Target: scaffold0059 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 26612 - 26584
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  26612 tttcttataataaggaccggagggagtat 26584  T

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Target: scaffold0059; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 26708 - 26736
Alignment:
Q  24 tttcttataataaggaccggagggagtat 52  Q
    |||||||||||||||||||||||||||||    
T  26708 tttcttataataaggaccggagggagtat 26736  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 112856 - 112820
Alignment:
Q  17 tcaattatttcttataataaggaccggagggagtatt 53  Q
    |||||| |||||||||||||||||| |||||||||||    
T  112856 tcaattgtttcttataataaggacccgagggagtatt 112820  T

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