View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14871_low_17 (Length: 339)

Name: NF14871_low_17
Description: NF14871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14871_low_17
NF14871_low_17
[»] chr7 (60 HSPs)
chr7 (33-329)||(11890907-11891190)
chr7 (24-161)||(5409815-5409952)
chr7 (24-160)||(9778452-9778580)
chr7 (24-161)||(13770634-13770771)
chr7 (24-160)||(1433398-1433534)
chr7 (60-160)||(25481846-25481946)
chr7 (39-150)||(24339596-24339707)
chr7 (24-96)||(32093999-32094072)
chr7 (59-155)||(42720904-42720994)
chr7 (24-96)||(43027448-43027520)
chr7 (58-113)||(11700794-11700849)
chr7 (61-160)||(30730981-30731080)
chr7 (60-158)||(11061091-11061189)
chr7 (39-113)||(26033455-26033529)
chr7 (39-104)||(7438706-7438771)
chr7 (35-104)||(16341496-16341565)
chr7 (53-109)||(11665448-11665504)
chr7 (60-155)||(26733253-26733348)
chr7 (58-109)||(29787382-29787433)
chr7 (58-96)||(2424622-2424660)
chr7 (39-97)||(9408328-9408386)
chr7 (39-96)||(18039006-18039064)
chr7 (63-113)||(19213794-19213844)
chr7 (35-96)||(18215176-18215237)
chr7 (40-109)||(22602705-22602774)
chr7 (60-96)||(3991332-3991368)
chr7 (40-96)||(7058434-7058490)
chr7 (40-163)||(7328686-7328803)
chr7 (25-109)||(7758317-7758401)
chr7 (58-102)||(12289116-12289160)
chr7 (60-96)||(13300418-13300454)
chr7 (24-96)||(15680817-15680884)
chr7 (48-96)||(19992009-19992057)
chr7 (41-160)||(27944991-27945104)
chr7 (61-109)||(32308115-32308163)
chr7 (35-94)||(5548686-5548745)
chr7 (59-106)||(18013088-18013135)
chr7 (61-96)||(35861972-35862007)
chr7 (59-105)||(8056959-8057004)
chr7 (39-94)||(11272580-11272637)
chr7 (58-96)||(14729709-14729747)
chr7 (39-93)||(17307904-17307958)
chr7 (59-161)||(17851374-17851476)
chr7 (59-97)||(38143230-38143268)
chr7 (59-96)||(1401033-1401070)
chr7 (40-98)||(2334254-2334314)
chr7 (59-104)||(10377507-10377552)
chr7 (59-96)||(15902830-15902867)
chr7 (59-96)||(20549799-20549836)
chr7 (59-96)||(22868050-22868087)
chr7 (60-109)||(23191891-23191940)
chr7 (59-95)||(3938152-3938188)
chr7 (64-96)||(8234154-8234186)
chr7 (60-96)||(11831440-11831476)
chr7 (59-103)||(12278836-12278880)
chr7 (59-131)||(19206023-19206095)
chr7 (60-96)||(21880160-21880196)
chr7 (62-109)||(22306526-22306574)
chr7 (60-96)||(30813820-30813856)
chr7 (53-109)||(43249988-43250044)
[»] chr1 (84 HSPs)
chr1 (24-159)||(1486688-1486823)
chr1 (59-160)||(398779-398880)
chr1 (40-160)||(6612166-6612286)
chr1 (40-109)||(113294-113363)
chr1 (41-161)||(24577182-24577290)
chr1 (59-115)||(40181860-40181916)
chr1 (60-160)||(41877485-41877585)
chr1 (60-160)||(42359464-42359564)
chr1 (62-108)||(12611962-12612008)
chr1 (24-109)||(19562599-19562685)
chr1 (42-160)||(25272426-25272544)
chr1 (59-104)||(1864894-1864939)
chr1 (60-97)||(40258948-40258985)
chr1 (39-96)||(47989505-47989562)
chr1 (60-159)||(3490405-3490498)
chr1 (34-86)||(35919265-35919317)
chr1 (24-96)||(37598840-37598906)
chr1 (41-96)||(1704988-1705043)
chr1 (59-110)||(5898280-5898331)
chr1 (40-96)||(5944289-5944347)
chr1 (59-162)||(7918225-7918328)
chr1 (60-95)||(18337338-18337373)
chr1 (39-94)||(44482240-44482295)
chr1 (59-157)||(9709767-9709865)
chr1 (59-109)||(13997878-13997928)
chr1 (24-98)||(15323169-15323243)
chr1 (59-109)||(36878456-36878506)
chr1 (60-160)||(38078676-38078771)
chr1 (62-159)||(9103585-9103682)
chr1 (115-160)||(10577805-10577850)
chr1 (59-96)||(16927199-16927236)
chr1 (59-104)||(19324562-19324607)
chr1 (60-109)||(22515902-22515951)
chr1 (60-160)||(22881631-22881725)
chr1 (58-103)||(25452161-25452206)
chr1 (62-107)||(30847737-30847782)
chr1 (59-96)||(34298444-34298481)
chr1 (24-109)||(46348367-46348447)
chr1 (64-160)||(2896140-2896236)
chr1 (61-97)||(9449024-9449060)
chr1 (40-96)||(9629895-9629951)
chr1 (61-109)||(12443476-12443524)
chr1 (60-96)||(18190123-18190159)
chr1 (60-96)||(23738686-23738722)
chr1 (60-96)||(31015051-31015087)
chr1 (60-96)||(31672910-31672946)
chr1 (25-96)||(32461438-32461514)
chr1 (34-102)||(34712372-34712440)
chr1 (121-160)||(609534-609573)
chr1 (41-96)||(6427358-6427413)
chr1 (58-96)||(9033020-9033059)
chr1 (61-96)||(9828052-9828087)
chr1 (59-94)||(25098569-25098604)
chr1 (59-94)||(25361896-25361931)
chr1 (48-94)||(2283676-2283722)
chr1 (59-109)||(13436453-13436503)
chr1 (59-101)||(23531792-23531834)
chr1 (59-109)||(28674795-28674845)
chr1 (40-109)||(5376495-5376564)
chr1 (60-109)||(5927355-5927404)
chr1 (59-96)||(10233261-10233298)
chr1 (59-96)||(14332656-14332693)
chr1 (59-96)||(16164329-16164366)
chr1 (59-96)||(17425107-17425144)
chr1 (63-96)||(17754319-17754352)
chr1 (35-96)||(20157340-20157401)
chr1 (60-129)||(21378553-21378622)
chr1 (59-96)||(22794092-22794129)
chr1 (63-96)||(23653007-23653040)
chr1 (59-104)||(34257924-34257969)
chr1 (42-111)||(34371707-34371775)
chr1 (115-160)||(41597540-41597585)
chr1 (60-96)||(51410032-51410069)
chr1 (115-160)||(52284654-52284699)
chr1 (60-96)||(1815265-1815301)
chr1 (60-96)||(6332679-6332714)
chr1 (60-96)||(10572604-10572640)
chr1 (60-96)||(11605950-11605986)
chr1 (117-157)||(26830542-26830582)
chr1 (60-96)||(27471581-27471617)
chr1 (60-96)||(28273103-28273139)
chr1 (39-96)||(31694704-31694763)
chr1 (60-96)||(32434731-32434767)
chr1 (60-96)||(48450602-48450638)
[»] scaffold0027 (1 HSPs)
scaffold0027 (60-160)||(46626-46726)
[»] chr6 (76 HSPs)
chr6 (39-160)||(9107364-9107485)
chr6 (39-159)||(16766642-16766762)
chr6 (48-160)||(7938060-7938172)
chr6 (60-160)||(8776988-8777088)
chr6 (25-109)||(12696319-12696403)
chr6 (39-160)||(5970102-5970217)
chr6 (30-96)||(10770659-10770725)
chr6 (26-160)||(28715241-28715368)
chr6 (35-104)||(9025484-9025553)
chr6 (35-160)||(9027122-9027247)
chr6 (60-160)||(426529-426629)
chr6 (53-109)||(17341672-17341728)
chr6 (25-96)||(34595142-34595208)
chr6 (39-160)||(8365513-8365628)
chr6 (24-109)||(3398614-3398698)
chr6 (58-103)||(31579238-31579283)
chr6 (60-160)||(1681702-1681802)
chr6 (59-95)||(16388247-16388283)
chr6 (60-96)||(31384928-31384964)
chr6 (59-107)||(32839660-32839708)
chr6 (25-109)||(33001274-33001353)
chr6 (59-106)||(5462684-5462731)
chr6 (60-163)||(7977845-7977948)
chr6 (39-104)||(8713979-8714045)
chr6 (58-160)||(8805585-8805687)
chr6 (59-145)||(9658839-9658924)
chr6 (59-109)||(19040347-19040397)
chr6 (59-109)||(26562684-26562734)
chr6 (59-109)||(32320683-32320733)
chr6 (48-106)||(32511669-32511727)
chr6 (58-96)||(34225822-34225860)
chr6 (59-96)||(7151420-7151457)
chr6 (59-96)||(7265607-7265644)
chr6 (59-104)||(7996392-7996437)
chr6 (59-104)||(8022364-8022409)
chr6 (39-96)||(9522899-9522956)
chr6 (25-90)||(17327635-17327700)
chr6 (60-109)||(17841604-17841653)
chr6 (36-96)||(2117084-2117143)
chr6 (34-102)||(7086797-7086865)
chr6 (60-96)||(7801171-7801207)
chr6 (60-96)||(16833316-16833352)
chr6 (39-161)||(18367780-18367901)
chr6 (24-96)||(28152107-28152173)
chr6 (60-96)||(31959167-31959203)
chr6 (62-145)||(6389702-6389785)
chr6 (62-109)||(10842527-10842574)
chr6 (59-110)||(21924949-21925000)
chr6 (25-104)||(24138426-24138505)
chr6 (48-94)||(1700362-1700408)
chr6 (60-98)||(4118348-4118386)
chr6 (59-109)||(5732524-5732574)
chr6 (62-96)||(12627594-12627628)
chr6 (59-93)||(13360386-13360420)
chr6 (63-96)||(403882-403915)
chr6 (59-96)||(1532248-1532285)
chr6 (115-160)||(2386771-2386816)
chr6 (60-97)||(6349752-6349789)
chr6 (59-96)||(7569182-7569219)
chr6 (59-96)||(9617442-9617479)
chr6 (59-160)||(9629328-9629428)
chr6 (59-92)||(11591884-11591917)
chr6 (60-105)||(25038086-25038131)
chr6 (59-96)||(30866158-30866195)
chr6 (59-96)||(34073361-34073398)
chr6 (60-96)||(853874-853910)
chr6 (60-96)||(1191715-1191751)
chr6 (60-96)||(2224234-2224270)
chr6 (59-94)||(7027251-7027287)
chr6 (61-97)||(7930312-7930348)
chr6 (41-96)||(9911524-9911580)
chr6 (60-96)||(17435207-17435243)
chr6 (40-96)||(20576628-20576684)
chr6 (68-96)||(25010225-25010253)
chr6 (59-95)||(26314648-26314684)
chr6 (62-106)||(34446563-34446607)
[»] chr3 (72 HSPs)
chr3 (60-161)||(15796309-15796410)
chr3 (34-96)||(25948876-25948938)
chr3 (63-160)||(3164043-3164140)
chr3 (25-160)||(21479068-21479198)
chr3 (28-160)||(34307763-34307895)
chr3 (39-109)||(4987285-4987355)
chr3 (47-109)||(26508105-26508167)
chr3 (24-96)||(28918009-28918078)
chr3 (59-160)||(25093446-25093547)
chr3 (60-160)||(10268501-10268601)
chr3 (24-96)||(27505254-27505326)
chr3 (53-160)||(24205049-24205156)
chr3 (37-96)||(49651778-49651837)
chr3 (63-113)||(51206371-51206421)
chr3 (59-96)||(7928458-7928495)
chr3 (48-129)||(8383232-8383313)
chr3 (58-111)||(11251971-11252024)
chr3 (41-98)||(16789018-16789075)
chr3 (39-111)||(1509532-1509604)
chr3 (59-103)||(4201397-4201441)
chr3 (24-160)||(7171446-7171576)
chr3 (24-96)||(10954960-10955027)
chr3 (61-109)||(14979176-14979224)
chr3 (60-96)||(34910325-34910361)
chr3 (60-160)||(35994753-35994852)
chr3 (24-96)||(55401083-55401150)
chr3 (39-160)||(750612-750734)
chr3 (59-105)||(9624640-9624686)
chr3 (58-104)||(27277851-27277897)
chr3 (63-160)||(10335304-10335401)
chr3 (59-104)||(11313814-11313859)
chr3 (115-160)||(14027959-14028004)
chr3 (39-96)||(14209121-14209178)
chr3 (59-104)||(16192764-16192809)
chr3 (60-105)||(21257001-21257046)
chr3 (58-139)||(25064874-25064955)
chr3 (59-96)||(29508452-29508489)
chr3 (59-104)||(32804554-32804599)
chr3 (42-106)||(15314873-15314937)
chr3 (48-96)||(17005622-17005670)
chr3 (41-109)||(34185119-34185187)
chr3 (60-95)||(20503474-20503509)
chr3 (59-106)||(24633415-24633462)
chr3 (59-97)||(14840305-14840343)
chr3 (60-97)||(25775515-25775553)
chr3 (42-96)||(28812523-28812577)
chr3 (59-96)||(1550148-1550185)
chr3 (58-115)||(3618870-3618927)
chr3 (59-104)||(7614429-7614474)
chr3 (39-96)||(8039829-8039886)
chr3 (60-93)||(8587036-8587069)
chr3 (39-96)||(9800048-9800105)
chr3 (115-160)||(10318110-10318155)
chr3 (59-96)||(10690276-10690313)
chr3 (59-96)||(11493375-11493412)
chr3 (72-141)||(12674528-12674597)
chr3 (59-96)||(12704015-12704052)
chr3 (39-96)||(14832107-14832164)
chr3 (59-96)||(18426957-18426994)
chr3 (59-96)||(23870573-23870610)
chr3 (59-96)||(38731226-38731263)
chr3 (59-92)||(39002044-39002077)
chr3 (39-96)||(41961644-41961701)
chr3 (59-96)||(49505168-49505205)
chr3 (64-96)||(11610529-11610561)
chr3 (53-105)||(15544692-15544744)
chr3 (59-95)||(15812835-15812871)
chr3 (124-160)||(22774132-22774167)
chr3 (60-96)||(26492220-26492256)
chr3 (59-103)||(30994896-30994940)
chr3 (69-109)||(40052327-40052367)
chr3 (60-104)||(55212963-55213007)
[»] chr4 (55 HSPs)
chr4 (24-163)||(3947745-3947877)
chr4 (24-160)||(23292970-23293101)
chr4 (39-160)||(19482612-19482733)
chr4 (24-113)||(54580007-54580091)
chr4 (41-96)||(11596348-11596403)
chr4 (30-96)||(12895101-12895167)
chr4 (53-158)||(14126119-14126224)
chr4 (59-109)||(15029760-15029810)
chr4 (60-154)||(27706192-27706286)
chr4 (58-160)||(21873384-21873478)
chr4 (58-160)||(21929245-21929339)
chr4 (59-104)||(22440614-22440659)
chr4 (59-160)||(24343451-24343552)
chr4 (58-107)||(24999041-24999090)
chr4 (59-160)||(36635268-36635369)
chr4 (60-96)||(28964263-28964299)
chr4 (60-96)||(29205452-29205488)
chr4 (59-155)||(40179650-40179746)
chr4 (59-98)||(903928-903967)
chr4 (37-103)||(15659752-15659818)
chr4 (60-160)||(20633429-20633526)
chr4 (60-160)||(42640476-42640573)
chr4 (24-109)||(49431020-49431101)
chr4 (58-104)||(56257933-56257979)
chr4 (115-160)||(4157102-4157147)
chr4 (60-97)||(6485626-6485663)
chr4 (59-96)||(8423732-8423769)
chr4 (39-96)||(30982872-30982929)
chr4 (48-96)||(12895277-12895325)
chr4 (60-96)||(14465090-14465126)
chr4 (48-92)||(16189721-16189765)
chr4 (60-96)||(21945511-21945547)
chr4 (28-96)||(32273509-32273577)
chr4 (48-96)||(35157988-35158036)
chr4 (58-109)||(2234245-2234296)
chr4 (60-160)||(2361990-2362092)
chr4 (53-96)||(32910559-32910602)
chr4 (41-160)||(44081573-44081692)
chr4 (59-105)||(1213235-1213280)
chr4 (59-97)||(5775372-5775410)
chr4 (63-101)||(12077831-12077869)
chr4 (122-160)||(12708090-12708128)
chr4 (58-96)||(17425402-17425440)
chr4 (59-109)||(40613445-40613495)
chr4 (59-104)||(9996840-9996885)
chr4 (63-104)||(11931280-11931321)
chr4 (51-96)||(37203272-37203317)
chr4 (24-96)||(40481645-40481716)
chr4 (39-96)||(51701266-51701323)
chr4 (60-96)||(4383376-4383411)
chr4 (59-103)||(6863154-6863198)
chr4 (60-92)||(12224210-12224242)
chr4 (60-96)||(12797353-12797388)
chr4 (60-96)||(38847027-38847063)
chr4 (60-96)||(47263994-47264030)
[»] chr5 (59 HSPs)
chr5 (25-104)||(43001800-43001879)
chr5 (24-109)||(31084318-31084403)
chr5 (41-155)||(13287395-13287509)
chr5 (39-160)||(21522694-21522815)
chr5 (39-160)||(21533260-21533381)
chr5 (24-160)||(15382421-15382560)
chr5 (24-160)||(23015968-23016106)
chr5 (39-109)||(39698536-39698606)
chr5 (36-113)||(6471880-6471957)
chr5 (60-160)||(17177038-17177138)
chr5 (60-147)||(21191071-21191158)
chr5 (24-160)||(36642735-36642876)
chr5 (39-96)||(7677713-7677770)
chr5 (27-104)||(39205880-39205957)
chr5 (60-96)||(6247630-6247666)
chr5 (60-96)||(21576760-21576796)
chr5 (62-109)||(4344737-4344784)
chr5 (41-160)||(19579645-19579764)
chr5 (39-150)||(21541984-21542095)
chr5 (59-106)||(24273044-24273091)
chr5 (59-106)||(24389123-24389170)
chr5 (33-96)||(38749551-38749614)
chr5 (65-104)||(40000555-40000594)
chr5 (59-109)||(28588688-28588738)
chr5 (59-96)||(5467992-5468029)
chr5 (60-109)||(14674264-14674313)
chr5 (64-109)||(19552562-19552607)
chr5 (59-96)||(40131629-40131666)
chr5 (59-104)||(41091271-41091316)
chr5 (60-96)||(24906316-24906352)
chr5 (39-158)||(41995417-41995534)
chr5 (60-96)||(42893368-42893404)
chr5 (41-96)||(3966511-3966566)
chr5 (59-98)||(30098332-30098371)
chr5 (49-96)||(4105265-4105314)
chr5 (34-96)||(10298577-10298639)
chr5 (24-94)||(14873527-14873597)
chr5 (62-160)||(15410465-15410563)
chr5 (59-97)||(33035815-33035853)
chr5 (48-94)||(43564891-43564937)
chr5 (59-104)||(16203809-16203854)
chr5 (59-96)||(17593736-17593773)
chr5 (59-104)||(18421855-18421900)
chr5 (61-94)||(19438353-19438386)
chr5 (115-160)||(20683325-20683370)
chr5 (39-96)||(21351899-21351956)
chr5 (60-109)||(27932230-27932279)
chr5 (59-96)||(30502402-30502439)
chr5 (59-96)||(30542745-30542782)
chr5 (59-96)||(35017045-35017082)
chr5 (58-98)||(41794090-41794131)
chr5 (60-96)||(7218282-7218318)
chr5 (60-96)||(8420035-8420071)
chr5 (60-96)||(15405070-15405106)
chr5 (69-109)||(22611761-22611801)
chr5 (119-159)||(28862262-28862302)
chr5 (60-96)||(33178033-33178069)
chr5 (39-95)||(37328838-37328894)
chr5 (60-96)||(41633743-41633779)
[»] chr2 (62 HSPs)
chr2 (59-158)||(21616708-21616807)
chr2 (60-161)||(2438734-2438832)
chr2 (60-160)||(30335361-30335461)
chr2 (58-161)||(28412293-28412396)
chr2 (39-96)||(12668417-12668474)
chr2 (60-109)||(30404865-30404914)
chr2 (42-159)||(44860273-44860382)
chr2 (25-96)||(974755-974826)
chr2 (24-151)||(15972826-15972948)
chr2 (58-109)||(21782831-21782882)
chr2 (59-109)||(28677904-28677954)
chr2 (48-109)||(29176496-29176557)
chr2 (59-160)||(40361768-40361869)
chr2 (39-158)||(23058436-23058556)
chr2 (60-96)||(30717545-30717581)
chr2 (59-103)||(35449514-35449558)
chr2 (58-145)||(2331753-2331840)
chr2 (48-159)||(18276466-18276577)
chr2 (60-161)||(21374714-21374810)
chr2 (59-109)||(16069268-16069318)
chr2 (35-109)||(24894384-24894458)
chr2 (59-161)||(31283991-31284093)
chr2 (42-96)||(36756341-36756395)
chr2 (60-109)||(11223878-11223927)
chr2 (60-96)||(12940950-12940986)
chr2 (60-96)||(15657872-15657908)
chr2 (59-103)||(30527609-30527653)
chr2 (58-94)||(36409640-36409676)
chr2 (39-95)||(37419752-37419808)
chr2 (48-103)||(18420437-18420492)
chr2 (41-96)||(18622614-18622669)
chr2 (59-98)||(23921259-23921298)
chr2 (71-158)||(34337202-34337289)
chr2 (58-104)||(4332926-4332972)
chr2 (62-96)||(5473336-5473370)
chr2 (60-154)||(18421914-18422007)
chr2 (43-160)||(20539672-20539783)
chr2 (61-103)||(22084848-22084890)
chr2 (59-96)||(5367200-5367237)
chr2 (60-109)||(18841028-18841077)
chr2 (60-96)||(19536412-19536449)
chr2 (59-96)||(23718034-23718071)
chr2 (59-96)||(24105706-24105743)
chr2 (59-96)||(25846749-25846786)
chr2 (115-160)||(26769461-26769506)
chr2 (59-96)||(31808085-31808122)
chr2 (59-96)||(34691819-34691856)
chr2 (59-96)||(34714231-34714268)
chr2 (115-160)||(34785052-34785097)
chr2 (59-96)||(37411258-37411295)
chr2 (60-109)||(37558972-37559021)
chr2 (60-109)||(38117174-38117223)
chr2 (53-109)||(10535767-10535823)
chr2 (62-94)||(11308021-11308053)
chr2 (25-96)||(14996204-14996275)
chr2 (69-109)||(19959810-19959850)
chr2 (59-107)||(32199154-32199202)
chr2 (60-96)||(33153432-33153468)
chr2 (62-98)||(36281691-36281727)
chr2 (59-103)||(39279676-39279720)
chr2 (60-96)||(39323272-39323308)
chr2 (48-96)||(42832279-42832327)
[»] scaffold0021 (1 HSPs)
scaffold0021 (47-161)||(130425-130539)
[»] chr8 (63 HSPs)
chr8 (22-159)||(24857954-24858093)
chr8 (39-160)||(22651920-22652041)
chr8 (42-109)||(11927083-11927150)
chr8 (42-160)||(25566787-25566903)
chr8 (39-160)||(29510298-29510419)
chr8 (53-160)||(24413567-24413675)
chr8 (59-106)||(11803257-11803304)
chr8 (42-109)||(11944660-11944727)
chr8 (42-96)||(15816126-15816180)
chr8 (63-104)||(41831958-41831999)
chr8 (60-96)||(4948660-4948696)
chr8 (48-96)||(36450757-36450805)
chr8 (59-159)||(36934615-36934715)
chr8 (48-159)||(926791-926902)
chr8 (41-96)||(2572052-2572107)
chr8 (25-96)||(3025559-3025625)
chr8 (60-159)||(4673440-4673538)
chr8 (58-161)||(37283823-37283926)
chr8 (53-160)||(44067460-44067567)
chr8 (59-109)||(13844610-13844660)
chr8 (59-109)||(31236591-31236641)
chr8 (22-104)||(40332191-40332268)
chr8 (115-160)||(3951599-3951644)
chr8 (60-109)||(4298901-4298950)
chr8 (59-96)||(14134707-14134744)
chr8 (59-104)||(14731712-14731757)
chr8 (59-160)||(24362216-24362317)
chr8 (60-109)||(24669428-24669477)
chr8 (60-109)||(31556992-31557040)
chr8 (59-96)||(34897093-34897130)
chr8 (59-158)||(4786352-4786445)
chr8 (60-96)||(8342980-8343016)
chr8 (60-96)||(8343324-8343360)
chr8 (48-96)||(20679398-20679446)
chr8 (60-96)||(20873077-20873113)
chr8 (60-96)||(30077402-30077438)
chr8 (46-109)||(25192348-25192411)
chr8 (59-157)||(4611481-4611579)
chr8 (39-109)||(13436958-13437028)
chr8 (66-160)||(27101459-27101553)
chr8 (59-109)||(27213542-27213592)
chr8 (63-105)||(28642407-28642449)
chr8 (59-109)||(39954293-39954343)
chr8 (59-96)||(7658471-7658508)
chr8 (59-104)||(12606843-12606888)
chr8 (59-96)||(13203649-13203686)
chr8 (115-160)||(18069193-18069238)
chr8 (115-160)||(18964115-18964160)
chr8 (60-161)||(22197757-22197858)
chr8 (60-109)||(22595989-22596038)
chr8 (59-104)||(28385008-28385053)
chr8 (63-104)||(28745498-28745539)
chr8 (59-104)||(29776036-29776081)
chr8 (60-109)||(30271306-30271355)
chr8 (59-104)||(31580141-31580186)
chr8 (59-100)||(33405398-33405439)
chr8 (69-109)||(36107633-36107674)
chr8 (115-160)||(43737883-43737928)
chr8 (59-103)||(8798845-8798889)
chr8 (62-98)||(13018287-13018323)
chr8 (65-105)||(18067954-18067994)
chr8 (60-96)||(18407727-18407763)
chr8 (62-94)||(22493504-22493536)
[»] scaffold0652 (1 HSPs)
scaffold0652 (60-158)||(477-575)
[»] scaffold0171 (2 HSPs)
scaffold0171 (30-86)||(23438-23494)
scaffold0171 (53-86)||(23529-23562)
[»] scaffold0053 (1 HSPs)
scaffold0053 (24-160)||(8742-8873)
[»] scaffold0050 (1 HSPs)
scaffold0050 (24-104)||(70278-70353)
[»] scaffold0044 (1 HSPs)
scaffold0044 (39-95)||(53189-53245)
[»] scaffold0003 (1 HSPs)
scaffold0003 (24-109)||(241589-241680)
[»] scaffold0223 (1 HSPs)
scaffold0223 (39-109)||(20167-20237)
[»] scaffold0136 (1 HSPs)
scaffold0136 (60-161)||(3864-3970)
[»] scaffold0103 (1 HSPs)
scaffold0103 (60-109)||(51806-51855)
[»] scaffold0020 (1 HSPs)
scaffold0020 (35-104)||(135302-135371)
[»] scaffold0361 (1 HSPs)
scaffold0361 (60-96)||(14538-14574)
[»] scaffold0008 (1 HSPs)
scaffold0008 (39-103)||(263366-263430)
[»] scaffold0236 (1 HSPs)
scaffold0236 (42-105)||(25765-25828)
[»] scaffold0168 (1 HSPs)
scaffold0168 (59-162)||(20985-21088)
[»] scaffold0066 (1 HSPs)
scaffold0066 (60-109)||(33378-33427)
[»] scaffold0025 (1 HSPs)
scaffold0025 (42-98)||(23775-23832)
[»] scaffold0011 (1 HSPs)
scaffold0011 (60-109)||(17764-17813)
[»] scaffold0306 (1 HSPs)
scaffold0306 (29-96)||(13408-13476)
[»] scaffold0152 (1 HSPs)
scaffold0152 (29-96)||(21851-21919)
[»] scaffold0123 (1 HSPs)
scaffold0123 (59-107)||(44539-44587)
[»] scaffold0227 (1 HSPs)
scaffold0227 (53-96)||(7319-7362)
[»] scaffold0007 (1 HSPs)
scaffold0007 (53-160)||(225276-225383)
[»] scaffold0036 (1 HSPs)
scaffold0036 (42-96)||(9744-9798)
[»] scaffold0022 (1 HSPs)
scaffold0022 (59-97)||(90850-90888)
[»] scaffold1528 (1 HSPs)
scaffold1528 (63-96)||(1043-1076)
[»] scaffold0246 (1 HSPs)
scaffold0246 (24-96)||(19584-19655)
[»] scaffold0116 (1 HSPs)
scaffold0116 (115-160)||(9842-9887)
[»] scaffold0018 (2 HSPs)
scaffold0018 (60-96)||(178833-178870)
scaffold0018 (60-109)||(192264-192313)
[»] scaffold0004 (1 HSPs)
scaffold0004 (60-109)||(92802-92851)
[»] scaffold0722 (1 HSPs)
scaffold0722 (48-96)||(7035-7083)
[»] scaffold0122 (1 HSPs)
scaffold0122 (60-96)||(8018-8054)


Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 33 - 329
Target Start/End: Original strand, 11890907 - 11891190
Alignment:
Q  33 tcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctga 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| ||||||             |||||     
T  11890907 tcgtgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattattaaccgtatcagtgtccgt-------------gtctgg 11890993  T
Q  133 tgtctgtgtccgtatccgtgcttcatagtatcattactattaggcgcatgtgctaatctttctaatttgtttttctctttgtataactcttggtcttaac 232  Q
    ||||  ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11890994 tgtccatgtccgtatccgtacttcatagtattattactattaggcgcatgcgctaatctttctaatttgtttttctctttgtataactcttggtcttaac 11891093  T
Q  233 attacagttctcagaaaacttcactattgtgttattccactatgatggccgggttagtgagtgggacaagtttgagtggtcaaagaaagcaattcat 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891094 attacagttctcagaaaacttcactattgtgttattccactatgatggccgggttagtgagtgggacaagtttgagtggtcaaagaaagcaattcat 11891190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 5409815 - 5409952
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    ||||||||||||||||||||||| |||| |||||  ||||| ||||||||||||||||||||||||||||||| | || |||||||     ||||| |||    
T  5409815 ggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgt 5409914  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatagt 161  Q
    ||| || | |||||||||| ||||||||||||||||||    
T  5409915 cgtatccggtgtctgtgtctgtatccgtgcttcatagt 5409952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 9778580 - 9778452
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    |||||||||| |||||||||||| |||| |||||  |||||| |||||||||||||||||||||||||||| | | |||||||        |||||||||    
T  9778580 ggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtcag--------tgtccgtgt 9778489  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||| | |||| |||||||||||||||||||||||    
T  9778488 cgtgtccggtgtccgtgtccgtatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 13770771 - 13770634
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    |||||||||| |||||||||||| || | |||||  ||||||||||||||||||| ||||||| ||||||||| | ||||| ||||     |||||||||    
T  13770771 ggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgt 13770672  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatagt 161  Q
    |||||| |||||| | |||| |||||||| ||||||||    
T  13770671 cgtgtccgatgtccgagtccatatccgtgtttcatagt 13770634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 1433534 - 1433398
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    |||||| |||| ||||||||||| |||| ||||  ||||||||||  ||| |||||||||| ||||||||||||| ||||| ||||    ||||||||||    
T  1433534 ggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgt 1433435  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||  | |||| ||| |||||||||||||||||||    
T  1433434 cgtgttcggtgtccgtgcccgtatccgtgcttcatag 1433398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 25481946 - 25481846
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||||     ||||| ||| ||||| |||||| ||||| ||||||||||||||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctgtatccgtgcttcata 25481847  T
Q  160 g 160  Q
    |    
T  25481846 g 25481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 24339707 - 24339596
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||| | ||||| ||||    |||||| ||||||||| | |||| |    
T  24339707 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccg 24339608  T
Q  139 tgtccgtatccg 150  Q
    | ||||||||||    
T  24339607 tatccgtatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 32093999 - 32094072
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtga-ttttttcaaattatta 96  Q
    ||||||||||||||||||||||| |||| ||| |  ||||||||||||||||||||| ||||||||||||||||    
T  32093999 ggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattatta 32094072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 42720904 - 42720994
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgctt 155  Q
    ||||||||| | |||||||||||||||||||||||||| | |||||| |||      ||| ||||| ||||||||||||||||||||||||||||||    
T  42720904 ataattacatttaattatgtgattttttcaaattattagcggtgtcaacgt------gtcagtgtcatgtctgatgtctgtgtccgtatccgtgctt 42720994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 43027448 - 43027520
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||| |||||| |||| |||||  || |||||||| |||||||||||||||||||||||||    
T  43027448 ggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattatta 43027520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 11700849 - 11700794
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt 113  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  11700849 cataattacattgaattatgtgattttgtcaaattattaacggtgtcagcgtccgt 11700794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 30731080 - 30730981
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||||||||||||||||||| ||||||||||  | ||||| |||| |   |||  |||||||||||| |||| ||||||||||| |||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcatag 30730981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 11061091 - 11061189
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||| ||| |||||||||||||||||||||||||| | ||||| | ||     |||||||||||| || |||||| |||||||||||||||||||||    
T  11061091 taattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 26033455 - 26033529
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt 113  Q
    ||||||||  ||| |||||  ||||||||||||||||||||||||||||||||||||| | | ||||| ||||||    
T  26033455 ccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgcgtcagtgtccgt 26033529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 7438771 - 7438706
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||| | |||| |||||  |||||||| |||||||||||||||||||||||||||||| |||||    
T  7438771 ccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtc 7438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 16341565 - 16341496
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||| ||||  |||  ||||||||||| |||||||||||||| ||||||||||| |||||||    
T  16341565 gtgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattattatcagtgtc 16341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 11665448 - 11665504
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||   ||||||||||    
T  11665448 acacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgt 11665504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 26733348 - 26733253
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgctt 155  Q
    |||||| |||||||||||||||||| ||||||||||| | |||||  |||     ||||||||||||||||| |||| || ||||| |||||||||    
T  26733348 taattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggtatccgtttccgtgctt 26733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 29787382 - 29787433
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  29787382 cataattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 29787433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 2424660 - 2424622
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  2424660 cataattacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 9408328 - 9408386
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaa 97  Q
    |||| ||| |||| |||||  |||||||||| |||||||||||||||||||||||||||    
T  9408328 ccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaa 9408386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 18039064 - 18039006
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgatt-ttttcaaattatta 96  Q
    |||||||| |||| |||||  ||||||||||||||||||||||| ||||||||||||||    
T  18039064 ccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 19213844 - 19213794
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt 113  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||| ||||||    
T  19213844 ttacactgcattatgtgattttttaaaattattagcagtgtcagtgtccgt 19213794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 18215176 - 18215237
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||    
T  18215176 gtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattatta 18215237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 22602705 - 22602774
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||| |||| ||||  |||||||||||||||||||||||||| |||||| ||| || ||||| ||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgt 22602774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 3991368 - 3991332
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| ||||||||||||||||||||||||||||||    
T  3991368 taattatactgaattatgtgattttttcaaattatta 3991332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 7058490 - 7058434
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| |||| |||||  ||||||||||||||||  |||||||||||||||||||    
T  7058490 cgacacgacaccaacacttgtaattacactgaattacatgattttttcaaattatta 7058434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 7328686 - 7328803
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgt 139  Q
    ||||||| |||| ||||  ||||||||||| |||||||| ||||| ||||||||||| |||| ||  |||    ||||| |||||||||      || ||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgt------tcggt 7328779  T
Q  140 gtccgtatccgtgcttcatagtat 163  Q
    ||||||||||||||||||||||||    
T  7328780 gtccgtatccgtgcttcatagtat 7328803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 7758401 - 7758317
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| ||| |||||||||||| |||| |||| |||||||| |||||||||| | ||||| | |||||||||   ||||||||||    
T  7758401 gacacatgtggtgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgtcagcgt 7758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 12289160 - 12289116
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtg 102  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||    
T  12289160 cataattccactgaattatgtgattttctcaaattattagcagtg 12289116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 13300454 - 13300418
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13300454 taattacactgaattatatgattttttcaaattatta 13300418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 15680884 - 15680817
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| |     ||||| ||||||||||| ||||||||||||||||  ||||||||    
T  15680884 ggacacgtgtcgtgtccgacaccg-----acacttataattacactaaattatgtgattttttttaattatta 15680817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 19992057 - 19992009
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||| |||||||||||||| ||||||||||| |||||||||||    
T  19992057 caccgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 27945104 - 27944991
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtg 140  Q
    |||||| |||| |||||  ||||||||||||||||||| ||||| |||||||||||   ||||| ||||     |||||||||||||||      | |||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtc------cggtg 27945011  T
Q  141 tccgtatccgtgcttcatag 160  Q
    ||||||||||||||||||||    
T  27945010 tccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 32308163 - 32308115
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 32308115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 5548745 - 5548686
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattat 94  Q
    |||||||||||| |||  ||||  |||||||||||||||||| ||||||| |||||||||    
T  5548745 gtgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattat 5548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 18013088 - 18013135
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    |||||||||||||||||||| ||||||| |||||||||  ||||||||    
T  18013088 ataattacactgaattatgtaatttttttaaattattagtagtgtcag 18013135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 35862007 - 35861972
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| ||||||||||||||||||||||||||||    
T  35862007 aattacattgaattatgtgattttttcaaattatta 35861972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 8056959 - 8057004
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  8056959 ataattacactgaattatgtaatttttt-aaattattaactgtgtca 8057004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 11272580 - 11272637
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaat--tatgtgattttttcaaattat 94  Q
    |||||||| |||| |||||  ||||||||||||||  |||||||||||||||||||||    
T  11272580 ccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 14729747 - 14729709
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  14729747 cataattacactgaattacgtgattttctcaaattatta 14729709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 17307958 - 17307904
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaatta 93  Q
    |||||||| |||| ||||  |||||||||||||||||||| ||||| ||||||||    
T  17307958 ccgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 17851476 - 17851374
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc--agcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttc 156  Q
    |||||||||||||||||||||||||| | ||||||||| | || ||   | ||| |||  ||| ||||||||| | |||| ||||| |||||||||||||    
T  17851476 ataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggta--tccatgtcgtgtccggtgtccgtgtctgtatccgtgcttc 17851379  T
Q  157 atagt 161  Q
    |||||    
T  17851378 atagt 17851374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 38143268 - 38143230
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaa 97  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  38143268 ataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 1401070 - 1401033
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  1401070 ataattacactgaattatgtgagtttctcaaattatta 1401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 2334314 - 2334254
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgatt--ttttcaaattattaac 98  Q
    ||||||| |||| |||||  |||||||||| ||||||||||||  ||||||||||||||||    
T  2334314 cgacacgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaac 2334254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 10377552 - 10377507
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||| ||||||| | | |||||||||||||||    
T  10377552 ataattacactgaattatatgattttcttatattattaacagtgtc 10377507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 15902867 - 15902830
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15902867 ataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 20549836 - 20549799
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  20549836 ataattacactgaattacgtgattttctcaaattatta 20549799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 22868087 - 22868050
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  22868087 ataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 23191940 - 23191891
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||| ||||||||||| ||||||||||| | ||||| ||||    
T  23191940 taattacactgaaatatgtgattttctcaaattattagcggtgtcggcgt 23191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 3938188 - 3938152
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatt 95  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  3938188 ataattacattgaattatgtgatttttttaaattatt 3938152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 8234186 - 8234154
Alignment:
Q  64 tacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||| |||||||||||||||||    
T  8234186 tacactgaattatgttattttttcaaattatta 8234154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 11831476 - 11831440
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| |||||| |||||||||||||||||||    
T  11831476 taattacactaaattatatgattttttcaaattatta 11831440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 12278880 - 12278836
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||||||||||||||| ||||| | ||||||||| ||||||    
T  12278880 ataattacactgaattatgtcattttcttaaattattatcagtgt 12278836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 19206095 - 19206023
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctg 131  Q
    ||||||| | |||||||||||||||| ||||||||||| | ||||| ||||     |||||||||||||||||    
T  19206095 ataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctg 19206023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 21880196 - 21880160
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  21880196 taattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 22306574 - 22306526
Alignment:
Q  62 attacactgaattatgtgatt-ttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||| |||||||||||||| | || |||||||    
T  22306574 attacactgaattatgtgatttttttcaaattattagcggtctcagcgt 22306526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 30813856 - 30813820
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  30813856 taattacactgaattatgtaattttctcaaattatta 30813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 43250044 - 43249988
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| |||||||||||| ||||||| ||||| ||||||||||| | ||||| ||||    
T  43250044 acacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgt 43249988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 1486688 - 1486823
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||     | |||||||    
T  1486688 ggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgt 1486787  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||| || | | || |||||||||||| |||||||||    
T  1486788 cgtatccggtatccgtgtccgtatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 398779 - 398880
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||||     ||||||||||||||| | |||| | |||||||||||||||||||    
T  398779 ataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcat 398878  T
Q  159 ag 160  Q
    ||    
T  398879 ag 398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 6612166 - 6612286
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgt 139  Q
    ||||||| |||| |||||  ||||||||||||||||||| ||||||||||||||||||| || || ||||     ||||||||||||||| | |||  ||    
T  6612166 cgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgt 6612265  T
Q  140 gtccgtatccgtgcttcatag 160  Q
    ||||||||| |||||||||||    
T  6612266 gtccgtatctgtgcttcatag 6612286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 113363 - 113294
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 24577182 - 24577290
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtg 140  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||||||||||   |||||||||      ||||||||||||||      || |||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcg------tgtccgtgtcgtgt------tcagtg 24577269  T
Q  141 tccgtatccgtgcttcatagt 161  Q
    |||||||||||||||||||||    
T  24577270 tccgtatccgtgcttcatagt 24577290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 40181916 - 40181860
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtat 115  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||    
T  40181916 ataattacactgaattatgtgattttctcaaattattagcagtgtctgtgtccgtat 40181860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 41877485 - 41877585
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||||| |||||||| ||||| ||||||||||| | ||||| |||| |   |||| |||||||||||| | ||  |||||||||||||||||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatgtccgtatccgtgcttcata 41877584  T
Q  160 g 160  Q
    |    
T  41877585 g 41877585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 42359464 - 42359564
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||| |||||||||||||||||||||   ||||||||||     ||||||||| ||||  | |||  ||||||||||||||||||||||    
T  42359464 taattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccgtgcttcata 42359563  T
Q  160 g 160  Q
    |    
T  42359564 g 42359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 12612008 - 12611962
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcagcg 108  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12612008 attacactcaattatgtgattttttcaaattactaacagtgtcagcg 12611962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 19562599 - 19562685
Alignment:
Q  24 ggacacgtgtcgtgtccgacacgg-cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||| || |||||||| | |||||||||  |||||||||||||| |||| |||||| ||||||||||| ||||||| ||||    
T  19562599 ggacacgtgttgtatccgacactgacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgt 19562685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 25272544 - 25272426
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgt 141  Q
    ||||| |||| ||||| ||||||||||| |||||||||||||| ||||||| ||||| ||||||  ||   | |||  |||||||||||||||| | |||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgtttgtgtcgtgtctgatgtatatgt 25272445  T
Q  142 ccgtatccgtgcttcatag 160  Q
      |||||| ||||||||||    
T  25272444 ttgtatccatgcttcatag 25272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 1864894 - 1864939
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||    
T  1864894 ataattacactgaattatgtgattttctcaaattattaactgtgtc 1864939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 40258948 - 40258985
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaa 97  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40258948 taattacactgaattatgtgattttttcaaattattaa 40258985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 47989562 - 47989505
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  47989562 ccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 3490405 - 3490498
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||||||||| ||||  |||| ||||||||||| ||||||| ||||      ||| |||||||||| | ||||||| |||||||||||||||||||    
T  3490405 taattacactgaataatgtagttttctcaaattattagcagtgtcggcgt------gtcagtgtcgtgtccggtgtctgtatccgtatccgtgcttcata 3490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 35919265 - 35919317
Alignment:
Q  34 cgtgtccgacacggcacctacactcataattacactgaattatgtgatttttt 86  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||||||||||||    
T  35919265 cgtgtccgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 37598906 - 37598840
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| |     ||||| |||||||||||||||| |||||||||||||||||||||    
T  37598906 ggacacgtgtcgtgtccgacaccg-----acacttataattacactgaatt-tgtgattttttcaaattatta 37598840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 1704988 - 1705043
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| |||| |||||  ||||||| |||||||||||||||||||||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattatta 1705043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 5898280 - 5898331
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtc 110  Q
    |||||||||||||||||||||||||||||| ||||||| | ||||| |||||    
T  5898280 ataattacactgaattatgtgattttttcagattattagcggtgtcggcgtc 5898331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 5944347 - 5944289
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgatt--ttttcaaattatta 96  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||  ||||||||||||||    
T  5944347 cgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattatta 5944289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 7918225 - 7918328
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||||||||| |||||||||||    |||||||||     |||| |||||||||| | ||||  |||| ||| |||||||||||    
T  7918225 ataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatgtctgtaaccgtgcttcat 7918324  T
Q  159 agta 162  Q
    ||||    
T  7918325 agta 7918328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 18337373 - 18337338
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatt 95  Q
    ||||||||||||||||||||||||||||||||||||    
T  18337373 taattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 44482295 - 44482240
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattat 94  Q
    |||||||| |||| ||||  |||||||||||||||||||||||||| |||||||||    
T  44482295 ccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 9709865 - 9709767
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    |||||||||  ||||||||||||||| ||||||||||| | ||||  || |     ||||||||||||||||||||||  |||| ||||||||||||||    
T  9709865 ataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatgtctgtatccgtgcttca 9709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 13997928 - 13997878
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  13997928 ataattacactgaattatgtgatttttttaaataattaacggtgtcggcgt 13997878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 15323243 - 15323169
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaac 98  Q
    ||||||||||| | ||| |||||  ||  ||||| | ||||||||| ||||||||||||||||||||||||||||    
T  15323243 ggacacgtgtcatatccaacacgatacagacacttacaattacactaaattatgtgattttttcaaattattaac 15323169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 36878506 - 36878456
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  36878506 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 36878456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 38078676 - 38078771
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtg-tcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||| |||||||||||||||||||||||||||| | |||||  ||      |||| ||| ||||||| | |||| |||||||||||||||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacg------tgtcagtgttcgtgtccggtgtccgtgtccgtatccgtgcttcat 38078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 9103682 - 9103585
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||| ||| |||||||||||||||||||||||||||| ||||| ||||     |||||| ||| |||| | |||  |||||| |||||||||||||||    
T  9103682 attaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgtgtccatatccgtgcttcata 9103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 10577805 - 10577850
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||    
T  10577805 tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 16927199 - 16927236
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||| |||||||||||||||||||    
T  16927199 ataattacactgaattatatgattttttcaaattatta 16927236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 19324607 - 19324562
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||    
T  19324607 ataattacactgaattatgtgattttctcaaattatcagcagtgtc 19324562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 22515902 - 22515951
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||| |||||||||||||||||||||||||| | ||||| ||||    
T  22515902 taattacactaaattatgtgattttttcaaattattagctgtgtctgcgt 22515951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 22881631 - 22881725
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||||| ||||||||||||||||||||||||||   ||||| |||      |||| |||||||||| | |||| |||||  |||||||||||||||    
T  22881631 taattacactaaattatgtgattttttcaaattattagttgtgtcggcg------tgtcagtgtcgtgtccggtgtccgtgtctatatccgtgcttcata 22881724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 25452161 - 25452206
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||    
T  25452161 cataattacactgaattatgagattttctcaaattattagcagtgt 25452206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 30847737 - 30847782
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcagc 107  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||    
T  30847737 attacattgaattatgtcattttttcaaattattagcagtgtcagc 30847782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 34298481 - 34298444
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| |||||||||||    
T  34298481 ataattacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 46348367 - 46348447
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||| |     |||||  |||||||||| |||||| ||||||||||||||||||| | ||||| ||||    
T  46348367 ggacacgtgtcgtgtccgacaccg-----acacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgt 46348447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 2896140 - 2896236
Alignment:
Q  64 tacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||||||||| ||||||||||| | ||||| ||||     ||||||||| ||||| | |||| ||| | |||||||| ||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtgactgtatccgttcttcatag 2896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 9449024 - 9449060
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattattaa 97  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9449024 aattatactgaattatgtgattttttcaaattattaa 9449060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 9629895 - 9629951
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| |||| ||||| ||||| |||||||||||| ||||||| |||||||||||    
T  9629895 cgacacgacaccgacacttataatcacactgaattatatgattttatcaaattatta 9629951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 12443476 - 12443524
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgt 12443524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 18190123 - 18190159
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18190123 taattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 23738722 - 23738686
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||||||||||||||||||||||||||||||    
T  23738722 taattgcactgaattatgtgattttttcaaattatta 23738686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 31015087 - 31015051
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattatta 31015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 31672910 - 31672946
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||| ||||||||||||||||||||    
T  31672910 taattacactgaattaagtgattttttcaaattatta 31672946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 32461438 - 32461514
Alignment:
Q  25 gacacgtgtcgtgtccgacacgg-----cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||| |     |||| |||||  |||||||| | ||||||||||||||||||||||||||    
T  32461438 gacacgtgtcgtgtccgacaccgacacacaccaacacttgtaattacattaaattatgtgattttttcaaattatta 32461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 34712372 - 34712440
Alignment:
Q  34 cgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtg 102  Q
    ||||||||||||| |||  ||||  ||||||||||| |||||||| ||||| ||||||||||| |||||    
T  34712372 cgtgtccgacacgacactgacacatataattacactaaattatgttattttctcaaattattagcagtg 34712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 609534 - 609573
Alignment:
Q  121 tgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  609534 tgtcgtgtccgatgtctgtgtccgtatacgtgcttcatag 609573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 6427413 - 6427358
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| |||| ||||  ||||||||| |||||||||||||||| |||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattatta 6427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 9033020 - 9033059
Alignment:
Q  58 cataattacactgaattatgtga-ttttttcaaattatta 96  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  9033020 cataattacactgaattatgtgatttttttcaaattatta 9033059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 9828087 - 9828052
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||| |||||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 94
Target Start/End: Original strand, 25098569 - 25098604
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattat 94  Q
    |||||||||||||||||||||||||| |||||||||    
T  25098569 ataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 25361931 - 25361896
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattat 94  Q
    |||||||||||||||||||||||||| |||||||||    
T  25361931 ataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 2283722 - 2283676
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattat 94  Q
    |||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  2283722 caccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 13436503 - 13436453
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||  | ||||||||| ||||||| ||||    
T  13436503 ataattacactgaattatgtgatttccttaaattattagcagtgtcggcgt 13436453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 23531792 - 23531834
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagt 101  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||    
T  23531792 ataattacattgaattatgtgatattttcaaattattagcagt 23531834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 28674845 - 28674795
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||| |||||||||||| ||||| ||||||||||||| |||| |||||    
T  28674845 ataattatactgaattatgtaattttctcaaattattaacggtgttagcgt 28674795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 5376495 - 5376564
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||| |||| |||||  ||||||||||||||||||| ||||| | ||||||||| | ||||| ||||    
T  5376495 cgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgt 5376564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 5927355 - 5927404
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| | |||||| ||||||||||||||||||| |||||| |||||    
T  5927355 taattacattaaattatatgattttttcaaattattagcagtgttagcgt 5927404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 10233298 - 10233261
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  10233298 ataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 14332656 - 14332693
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  14332656 ataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 16164329 - 16164366
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  16164329 ataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 17425107 - 17425144
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  17425107 ataattacattgaattatgtgattttatcaaattatta 17425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 17754352 - 17754319
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||| |||||||||||||||||    
T  17754352 ttacactgaattatgtaattttttcaaattatta 17754319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 20157340 - 20157401
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||||| |||| ||||  || ||||||||||||||||||||||| ||| |||||||    
T  20157340 gtgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattatta 20157401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 21378622 - 21378553
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtc 129  Q
    ||||||||||||||||||| |||||||||| |||||| | ||||| | ||    ||||||||||||||||    
T  21378622 taattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtc 21378553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 22794092 - 22794129
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  22794092 ataattacactgtattatgtcattttttcaaattatta 22794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 23653040 - 23653007
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| |||||||||||||||||||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattatta 23653007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 34257924 - 34257969
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||| |||||||||||||| | ||||||||||| |||||    
T  34257924 ataattacactaaattatgtgattttattaaattattaacggtgtc 34257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 34371775 - 34371707
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtcc 111  Q
    ||||| |||| ||||  |||||||||||||||||||||||||| || |||||||| | ||||||| ||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcagtgtcc 34371707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 41597540 - 41597585
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||||||||| || |||| || ||||||||||||||||||||    
T  41597540 tgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcatag 41597585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 51410069 - 51410032
Alignment:
Q  60 taattacactgaattatgtgatt-ttttcaaattatta 96  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  51410069 taattacactgaattatgtgatttttttcaaattatta 51410032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 52284699 - 52284654
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||||||| ||| || |||||||| ||||||||||    
T  52284699 tgtccgtgtcgtgtctgatttctatgaccgtatccatgcttcatag 52284654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 1815301 - 1815265
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  1815301 taattacactgaattatgtgattttttaaaataatta 1815265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 6332714 - 6332679
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| ||||||||||||||    
T  6332714 taattacactgaattatgtgat-ttttcaaattatta 6332679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 10572604 - 10572640
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  10572604 taattacaccgaattatgtgattttctcaaattatta 10572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 11605950 - 11605986
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  11605950 taatttcactgaattatatgattttttcaaattatta 11605986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 26830582 - 26830542
Alignment:
Q  117 tccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    ||||||||||||| |||||| |||||| |||||||||||||    
T  26830582 tccgtgtcgtgtccgatgtccgtgtccatatccgtgcttca 26830542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 27471581 - 27471617
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||| |||| |||||||||||    
T  27471581 taattacactgaattatgtgcttttctcaaattatta 27471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 28273103 - 28273139
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  28273103 taattacactgaattatatgattttttcaaatgatta 28273139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 31694704 - 31694763
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtga--ttttttcaaattatta 96  Q
    |||||||| |||| |||||  |||||| ||||||||||||||  ||||||||||||||||    
T  31694704 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattatta 31694763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 32434731 - 32434767
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||||||||||| |||||||||||||||    
T  32434731 taattacaatgaattatgtgactttttcaaattatta 32434767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 48450602 - 48450638
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| |||||||| |||||||||||||||||    
T  48450602 taattacactaaattatgttattttttcaaattatta 48450638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 46726 - 46626
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||     ||||||||||||||| |||||| ||||||||||||||||||||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcata 46627  T
Q  160 g 160  Q
    |    
T  46626 g 46626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 9107364 - 9107485
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| |||||  ||||||||||||||| ||||||||||||||||||||| | ||||| ||||     ||||||||||||||| | |||| |    
T  9107364 ccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccg 9107463  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    |||| |||||||||||||||||    
T  9107464 tgtcagtatccgtgcttcatag 9107485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 16766762 - 16766642
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||| | ||||| ||||     ||||| ||||||||| | |||| |    
T  16766762 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccg 16766663  T
Q  139 tgtccgtatccgtgcttcata 159  Q
    ||||||||||| |||||||||    
T  16766662 tgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 7938172 - 7938060
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtat 147  Q
    |||| ||||| ||||||||||| |||||| ||||||||||||||||||| | ||||| ||||     ||||| ||||||||| | |||| ||||||||||    
T  7938172 caccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtat 7938073  T
Q  148 ccgtgcttcatag 160  Q
    |||||||||||||    
T  7938072 ccgtgcttcatag 7938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 8776988 - 8777088
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||| |||||||||||||||||||||   ||||| ||||     ||||||||||||||| | |||| ||||||||||||||||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcata 8777087  T
Q  160 g 160  Q
    |    
T  8777088 g 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 12696403 - 12696319
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||| |||  |||||  ||||||||||||||||||| ||||||||||||||||| | ||||| ||||    
T  12696403 gacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgt 12696319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 5970102 - 5970217
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| ||| |  ||||||||||||||||||||||||||||||||||||||| |||||  ||      |||||||||| |||| | |||| |    
T  5970102 ccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacg------tgtccgtgtcatgtccggtgtccg 5970195  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    |||||||||| |||||||||||    
T  5970196 tgtccgtatctgtgcttcatag 5970217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 10770659 - 10770725
Alignment:
Q  30 gtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| |||||| |||| |||||  |||||||||||||||||||||||||||||||||||||    
T  10770659 gtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 10770725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 28715368 - 28715241
Alignment:
Q  26 acacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtc- 124  Q
    |||||||||||||||||||| |     |||||  ||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||   ||||||     
T  28715368 acacgtgtcgtgtccgacaccg-----acacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtccgtat---cgtgtcc 28715277  T
Q  125 -gtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
     ||||| | |||| || ||||||||||||||||||||    
T  28715276 ggtgtccg-tgtccgtatccgtatccgtgcttcatag 28715241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 9025484 - 9025553
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||| |||||| |||| ||||  |||||||||||||||||||||||||| ||||||||||| |||||||    
T  9025484 gtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 9027247 - 9027122
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatg 134  Q
    ||||| |||||| |||| ||||  |||||||||| ||||||||||||| | ||||||||||| | ||||| ||||     ||||||||||||||| |  |    
T  9027247 gtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggag 9027148  T
Q  135 tctgtgtccgtatccgtgcttcatag 160  Q
    || ||||||||||| |||||||||||    
T  9027147 tccgtgtccgtatcggtgcttcatag 9027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 426529 - 426629
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||| | |||||||||||||||||||||||||||| ||||| ||||     ||||||||||||||| | | || ||||| |||||| |||||||||    
T  426529 taattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatccatgcttcata 426628  T
Q  160 g 160  Q
    |    
T  426629 g 426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 17341672 - 17341728
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  17341672 acacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgt 17341728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 34595208 - 34595142
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||| |     |||||  |||||||||||||||||||||||||||||||||||||    
T  34595208 gacacgtgtcgtgtccgacaccg-----acacttgtaattacactgaattatgtgattttttcaaattatta 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 8365513 - 8365628
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| |||||  ||||||||| |||||||||||| ||||||||||||||   ||||| ||||     |||||||||||||||||      |    
T  8365513 ccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctg------g 8365606  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||||||||||    
T  8365607 tgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 3398698 - 3398614
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| ||||||||||| ||||| |||| | ||| |||||||||||||||||| ||| ||||||||||||||| | ||||| ||||    
T  3398698 ggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgt 3398614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 31579238 - 31579283
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  31579238 cataattacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 1681802 - 1681702
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||||||||||| ||||||||||||||||||||   ||||| ||||     |||  |||||||||  | |||||||||| ||||||||||||||||    
T  1681802 taattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgtgcttcata 1681703  T
Q  160 g 160  Q
    |    
T  1681702 g 1681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 16388247 - 16388283
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatt 95  Q
    |||||||||||||||||||||||||||||||||||||    
T  16388247 ataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 31384964 - 31384928
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  31384964 taattacactgaattatgtgattttttcaaattatta 31384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 32839660 - 32839708
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagc 107  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  32839660 ataattatactggattatgtgattttctcaaattattaacagtgtcagc 32839708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 33001274 - 33001353
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||| |     ||||  ||||||||| | |||||||||||||||||||||||||| ||||||| ||||    
T  33001274 gacacgtgtcgtgtccgacaccg-----acacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgt 33001353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 5462731 - 5462684
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  5462731 ataattacaatgaattatgtgattttctcaaattattaacggtgtcag 5462684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 7977845 - 7977948
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||| ||||     | ||| |||||||||   |||| |||||| ||||||||||| |||    
T  7977845 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtccatatccgtgctttata 7977944  T
Q  160 gtat 163  Q
    ||||    
T  7977945 gtat 7977948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 8714045 - 8713979
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgatt-ttttcaaattattaacagtgtc 104  Q
    |||||||| |||| ||| |  ||||||||||||||||||||||| |||||||||||||||| |||||    
T  8714045 ccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtc 8713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 8805585 - 8805687
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||| |  |||     |||| |||||||||||| ||| |||||  |||||| |||||||    
T  8805585 cataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatccatgcttca 8805684  T
Q  158 tag 160  Q
    |||    
T  8805685 tag 8805687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 145
Target Start/End: Complemental strand, 9658924 - 9658839
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgt 145  Q
    |||||||||||||||||||||||||| | ||||||||| | ||||| ||||     ||||||||||||||||| ||||||| |||||    
T  9658924 ataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctg-tgtctgtatccgt 9658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 19040397 - 19040347
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  19040397 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 19040347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 26562734 - 26562684
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  26562734 ataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgt 26562684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 32320683 - 32320733
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| ||| |||||||||||||||| ||||||||||||| ||||||||||    
T  32320683 ataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgt 32320733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 32511669 - 32511727
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    |||| ||||| |||||||||||||||||||||||||| | ||||||||| | |||||||    
T  32511669 caccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 34225822 - 34225860
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34225822 cataattacactgaattatgcgattttttcaaattatta 34225860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 7151457 - 7151420
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7151457 ataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 7265607 - 7265644
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7265607 ataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 7996392 - 7996437
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||    
T  7996392 ataattacactgaattatatgattttctcaaattattagcagtgtc 7996437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 8022409 - 8022364
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||    
T  8022409 ataattacactgaattatatgattttctcaaattattagcagtgtc 8022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 9522956 - 9522899
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||  |||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  9522956 ccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 17327635 - 17327700
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaa 90  Q
    |||||||||||||||||||||| |||  ||||  ||| ||||||| |||||||||||||| |||||    
T  17327635 gacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgattttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 17841604 - 17841653
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||| |||||||||||||||||||||||||| | ||||| ||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgt 17841653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 2117143 - 2117084
Alignment:
Q  36 tgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| |||  ||||| |||||| || ||||||||||||||||||||||||||||    
T  2117143 tgtccgacacgacacg-acacttataattgcattgaattatgtgattttttcaaattatta 2117084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 7086865 - 7086797
Alignment:
Q  34 cgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtg 102  Q
    |||||| |||||  |||| ||||  ||||||||||| |||||||||||||| ||||||||||| |||||    
T  7086865 cgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtg 7086797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 7801171 - 7801207
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7801171 taattacgctgaattatgtgattttttcaaattatta 7801207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 16833352 - 16833316
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16833352 taattacactgaagtatgtgattttttcaaattatta 16833316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 161
Target Start/End: Complemental strand, 18367901 - 18367780
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtc-cgtatgtccgtgtcgtgtctgatgtct 137  Q
    |||||||| |||| ||||  |||||||||||| ||| ||||||||| | |||  |||| | ||||| ||||  |||  |||| ||||||||| | ||||     
T  18367901 ccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcgt--gtccatgtcgtgtccggtgtcc 18367804  T
Q  138 gtgtccgtatccgtgcttcatagt 161  Q
    ||||||||||||||||||||||||    
T  18367803 gtgtccgtatccgtgcttcatagt 18367780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 28152173 - 28152107
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| |     |||||  |||||||||||||||||||||| ||||||||||||||    
T  28152173 ggacacgtgtcgtgtccgacaccg-----acacttgtaattacactgaattatgtgat-ttttcaaattatta 28152107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 31959203 - 31959167
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31959203 taattacactgcattatgtgattttttcaaattatta 31959167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 6389785 - 6389702
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgt 145  Q
    |||||||| |||||| | ||||| ||||||||||| | ||||| ||||  |  ||||||||||||||| | |||||||||||||    
T  6389785 attacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgt 6389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 10842574 - 10842527
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| |||||||||||||||||||||||||| | ||||| ||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgt 10842527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 21924949 - 21925000
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtc 110  Q
    |||||||||||||||||| |||| || ||||||||||| ||||||| |||||    
T  21924949 ataattacactgaattatttgatattctcaaattattagcagtgtcggcgtc 21925000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 24138505 - 24138426
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||| ||||| ||||  |||| | ||  |||| |||||| |||||| ||||||||||||||||||| |||||||    
T  24138505 gacacgtgtcatgtccaacacaacaccgatacatataaatacacttaattatatgattttttcaaattattagcagtgtc 24138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 1700408 - 1700362
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattat 94  Q
    |||| ||||| |||||||||||||| ||||||||||||| |||||||    
T  1700408 caccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 4118348 - 4118386
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaac 98  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  4118348 taattacatttaattatgtgattttttcaaattattaac 4118386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 5732524 - 5732574
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||| || ||||||||||| ||||||||||||| ||||| ||||    
T  5732524 ataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgt 5732574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 12627594 - 12627628
Alignment:
Q  62 attacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||||||||| |||||||    
T  12627594 attacactgaattatgtgattttttcacattatta 12627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 13360386 - 13360420
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaatta 93  Q
    |||||||||||||||||||||||||| ||||||||    
T  13360386 ataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 403882 - 403915
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| ||||||||||||||||||||||||||    
T  403882 ttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 1532285 - 1532248
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  1532285 ataattacactgaattatgtaattttatcaaattatta 1532248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 2386771 - 2386816
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||| |||||||||||||||||  |||| |||||||||||||||||    
T  2386771 tgtctgtgtcgtgtctgatgtccatgtcagtatccgtgcttcatag 2386816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 6349752 - 6349789
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaa 97  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  6349752 taattacaatgaattatgtaattttttcaaattattaa 6349789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 7569182 - 7569219
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  7569182 ataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 9617479 - 9617442
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  9617479 ataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 9629428 - 9629328
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    ||||||||| |||||||||||||||| ||||||||||  | ||||| ||||    || |||||||||||||   |||||||||  || ||||||||||||    
T  9629428 ataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgtgt-agtctccgtgcttcat 9629330  T
Q  159 ag 160  Q
    ||    
T  9629329 ag 9629328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 11591884 - 11591917
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaatt 92  Q
    |||||||||||||||||||||||||| |||||||    
T  11591884 ataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 25038086 - 25038131
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    |||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  25038086 taattacactaaattatgtaattttctcaaattattaacggtgtca 25038131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 30866158 - 30866195
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  30866158 ataattacattgaattatgtgattttctcaaattatta 30866195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 34073361 - 34073398
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  34073361 ataattacactgaattatgagattttctcaaattatta 34073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 853874 - 853910
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  853874 taattgcacttaattatgtgattttttcaaattatta 853910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 1191715 - 1191751
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  1191715 taattacactgaattttgtgaatttttcaaattatta 1191751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 2224270 - 2224234
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  2224270 taattacactgaattatatgatttttttaaattatta 2224234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 7027287 - 7027251
Alignment:
Q  59 ataattacactgaattatgtgatt-ttttcaaattat 94  Q
    |||||||||||||||||||||||| ||||||||||||    
T  7027287 ataattacactgaattatgtgatttttttcaaattat 7027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 7930348 - 7930312
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattattaa 97  Q
    |||| |||| |||||||||||||||||||||||||||    
T  7930348 aatttcactaaattatgtgattttttcaaattattaa 7930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 9911524 - 9911580
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattt-tttcaaattatta 96  Q
    |||||| |||| |||||  |||||||||||||||||||||||| ||| |||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattatta 9911580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 17435243 - 17435207
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  17435243 taattacactgaattatgtaattttttaaaattatta 17435207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 20576628 - 20576684
Alignment:
Q  40 cgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| |||| ||||| |||||||||||||||||||  ||||| || ||||||||    
T  20576628 cgacacgacaccaacacttataattacactgaattatgcaattttctcgaattatta 20576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 25010225 - 25010253
Alignment:
Q  68 ctgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||    
T  25010225 ctgaattatgtgattttttcaaattatta 25010253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 26314648 - 26314684
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatt 95  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  26314648 ataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 34446607 - 34446563
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    ||||||||||||||||| ||||| ||||||||||| | |||||||    
T  34446607 attacactgaattatgtcattttctcaaattattatccgtgtcag 34446563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 15796309 - 15796410
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||     ||||||||||||||| | |||| |||||| |||||||||||||||    
T  15796309 taattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcata 15796408  T
Q  160 gt 161  Q
    ||    
T  15796409 gt 15796410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 25948876 - 25948938
Alignment:
Q  34 cgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  25948876 cgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 3164043 - 3164140
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||||||||||||||||||||||||||||| | |||||  ||| |   ||||||||||||||| | |||| ||||| |||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 3164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 21479198 - 21479068
Alignment:
Q  25 gacacgtgtcgtgtccgacacgg-cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    |||| |||||||||||||||| | |||| |||||  ||||||||||||||| ||||||||||||||||||||| | ||||| |||      |||| ||||    
T  21479198 gacatgtgtcgtgtccgacaccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcg------tgtcagtgt 21479105  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||| | |||| |||||||||||| ||||||||||    
T  21479104 cgtgtccggtgtccgtgtccgtatccatgcttcatag 21479068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 34307763 - 34307895
Alignment:
Q  28 acgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtg 127  Q
    |||||||||||||||||| |   | ||||| |||||||||||||| ||||||||||| ||||||||||| | ||||||||||     |||| ||||| ||    
T  34307763 acgtgtcgtgtccgacaccgacacgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatg 34307862  T
Q  128 tctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    || | |||  |||||||||||| ||||||||||    
T  34307863 tccggtgttcgtgtccgtatccatgcttcatag 34307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 4987285 - 4987355
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  4987285 ccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 4987355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 26508167 - 26508105
Alignment:
Q  47 gcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  26508167 gcaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgt 26508105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 28918078 - 28918009
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||   ||| |||| |||||  |||||||||||||||||||||||||||||||||||||    
T  28918078 ggacacgtgtcgtgtcc---acgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 28918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 25093547 - 25093446
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||| ||||     |||| |||||||||| | |||||||||  |||||||| ||||||    
T  25093547 ataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgtgtttgtatccgtacttcat 25093448  T
Q  159 ag 160  Q
    ||    
T  25093447 ag 25093446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 10268501 - 10268601
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| ||||     ||||| ||||||    |||||| |||| |||||||||||||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgtgttcgtatccgtgcttcata 10268600  T
Q  160 g 160  Q
    |    
T  10268601 g 10268601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 27505326 - 27505254
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||| |||||| |||| |||||  |||||||||| |||||||||||||||  |||||||||    
T  27505326 ggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattatta 27505254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 24205049 - 24205156
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtg 152  Q
    ||||| |||||||||||| ||||||| ||||| ||||||||||| | ||||| ||||     ||||||||||||||| | |||| ||||| || ||||||    
T  24205049 acacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtg 24205148  T
Q  153 cttcatag 160  Q
    ||||||||    
T  24205149 cttcatag 24205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 49651778 - 49651837
Alignment:
Q  37 gtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| |||| |||||  |||||||| ||||||||||||||||||||||||||||    
T  49651778 gtccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 51206371 - 51206421
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt 113  Q
    |||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  51206371 ttacactgaattatgtgattttttcaaattattagctgtgtcagtgtccgt 51206421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 7928495 - 7928458
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7928495 ataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 8383313 - 8383232
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtc 129  Q
    |||| ||||| |||||||||||||||||| ||||||| ||||||||||| | ||||| ||||    ||||||||||||||||    
T  8383313 caccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtc 8383232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 11252024 - 11251971
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtcc 111  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||| ||||    
T  11252024 cataattacactgaattatgtgattttctcaaattattagcaatgtcagtgtcc 11251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 16789075 - 16789018
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattattaac 98  Q
    |||||| |||| ||||| |||||||||||||||||| ||||||||| |||||||||||    
T  16789075 gacacgacaccaacacttataattacactgaattatatgatttttttaaattattaac 16789018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 1509604 - 1509532
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtcc 111  Q
    |||| ||| |||| |||||  |||||||||| |||||||||||||||||||||||||| | ||||||| ||||    
T  1509604 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 1509532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 4201441 - 4201397
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  4201441 ataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 7171576 - 7171446
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagc--gtccgtatgtccgt 121  Q
    ||||||||||||||||||||||     | |||||  ||||||||| ||||||| |||||||| |||||||  | | ||||| ||  ||| ||||  ||||    
T  7171576 ggacacgtgtcgtgtccgacac-----caacacttgtaattacaccgaattatatgattttt-caaattacaagctgtgtcggcatgtcagtat--ccgt 7171485  T
Q  122 gtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  7171484 gtcgtgtccggtgtctgtgtccgtatccgtgcttcatag 7171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 10955027 - 10954960
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| |     |||||  | |||||||||||||||||||||||||||||||||||    
T  10955027 ggacacgtgtcgtgtccgacaccg-----acacttgtgattacactgaattatgtgattttttcaaattatta 10954960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 14979224 - 14979176
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 14979176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 34910361 - 34910325
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  34910361 taattacactgaattatgtgattttttcaaattatta 34910325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 35994753 - 35994852
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||| || |     ||||| ||||||||| | ||||  |||||||||||||||||||||    
T  35994753 taattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccgtgcttcata 35994851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 55401150 - 55401083
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| |     |||||  |||||||||| ||||||||||||||||||||||||||    
T  55401150 ggacacgtgtcgtgtccgacaccg-----acacttgtaattacactaaattatgtgattttttcaaattatta 55401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 750612 - 750734
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgta-tgtccgtgtcgtgtctgatgtct 137  Q
    |||||||| |||| |||||  ||||| ||  |||||||||||| ||||||||||||||   |||||  |||    | ||||||||||||||| | ||||     
T  750612 ccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtcc 750711  T
Q  138 gtgtccgtatccgtgcttcatag 160  Q
    |||||||||||||||||||||||    
T  750712 gtgtccgtatccgtgcttcatag 750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 9624686 - 9624640
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  9624686 ataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 27277851 - 27277897
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  27277851 cataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 10335304 - 10335401
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||| || ||||||| |||||||||||||||   ||||| ||||     ||||||||||||||| | |||| |||| ||||||||||||||||||    
T  10335304 ttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 11313814 - 11313859
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||    
T  11313814 ataattacactaaattatgtgattttctcaaattattagcagtgtc 11313859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 14028004 - 14027959
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||    
T  14028004 tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 14027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 14209178 - 14209121
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||  |||||  ||||||||||||||||||||||||||| |||||||||    
T  14209178 ccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattatta 14209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 16192764 - 16192809
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||    
T  16192764 ataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 21257001 - 21257046
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||    
T  21257001 taattatactgaattatgtgattttttcaaattattagctgtgtca 21257046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 25064955 - 25064874
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgt 139  Q
    |||||||||||| ||||||||||||||||||||| |||| | ||||| ||||    ||||| |||||||||| | |||||||    
T  25064955 cataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtctgt 25064874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 29508489 - 29508452
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29508489 ataattacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 32804554 - 32804599
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  32804554 ataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 15314873 - 15314937
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    ||||| |||| ||||  ||||||||||| ||||||||||||||||||||||| |||  |||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtcag 15314937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 17005622 - 17005670
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||| |||||||||||||||||| ||||||| |||||||||||    
T  17005622 caccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 34185119 - 34185187
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||| |||| |||||  ||||||||||||||| ||||||||||| ||||||||| | ||||| ||||    
T  34185119 gacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgt 34185187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 20503509 - 20503474
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatt 95  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20503509 taattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 24633415 - 24633462
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    ||||||||| ||||||| ||||||||| |||||||||||| |||||||    
T  24633415 ataattacattgaattacgtgatttttccaaattattaactgtgtcag 24633462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 14840305 - 14840343
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaa 97  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  14840305 ataattacactgaattatgtgattttctgaaattattaa 14840343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 25775553 - 25775515
Alignment:
Q  60 taattacactgaattatgtgatt-ttttcaaattattaa 97  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  25775553 taattacactgaattatgtgattattttcaaattattaa 25775515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 28812577 - 28812523
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||| |||||  ||| |||||||||||||||||||| ||||||||||||    
T  28812577 acacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattatta 28812523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 1550185 - 1550148
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||  |||||||||||||||||||||    
T  1550185 ataattacactgaatagtgtgattttttcaaattatta 1550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 3618927 - 3618870
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtat 115  Q
    ||||||||| ||||||||||  ||||| ||||||||||| | ||||||| ||||||||    
T  3618927 cataattacgctgaattatggaattttctcaaattattagcggtgtcagtgtccgtat 3618870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 7614429 - 7614474
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||| |||||||||||||||||| | ||||||||||| |||||    
T  7614429 ataattatactgaattatgtgattttcttaaattattaactgtgtc 7614474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 8039829 - 8039886
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||| ||||  |||||||||||||||||| | ||||| |||||||||||    
T  8039829 ccgacacgacaccgacacatataattacactgaattatataattttctcaaattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 8587036 - 8587069
Alignment:
Q  60 taattacactgaattatgtgattttttcaaatta 93  Q
    |||||||||| |||||||||||||||||||||||    
T  8587036 taattacacttaattatgtgattttttcaaatta 8587069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 9800105 - 9800048
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||| ||||| | |||||||| ||||||||| ||||| |||||||||||    
T  9800105 ccgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattatta 9800048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 10318110 - 10318155
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||| | |||| |||| ||||||||||||||||||    
T  10318110 tgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10318155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 10690276 - 10690313
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  10690276 ataattacactgaattatgtgattttctcagattatta 10690313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 11493375 - 11493412
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  11493375 ataattacactgaattatgtgattttctcacattatta 11493412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 12674528 - 12674597
Alignment:
Q  72 attatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgt 141  Q
    ||||| ||||||| ||||||||||| ||||||| | ||    |||||||||||||||||| |||||||||    
T  12674528 attatttgattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtctggtgtctgtgt 12674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 12704052 - 12704015
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  12704052 ataattacactgaattatgtgcttttctcaaattatta 12704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 14832164 - 14832107
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||  |||||  |||||||| ||| ||||||||||||||||||||||||    
T  14832164 ccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattatta 14832107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 18426994 - 18426957
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  18426994 ataattacaccgaattatgtgattttttgaaattatta 18426957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 23870573 - 23870610
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  23870573 ataatcacactgaattatatgattttttcaaattatta 23870610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 38731263 - 38731226
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  38731263 ataactacactgaattatgtgattttttaaaattatta 38731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 39002077 - 39002044
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaatt 92  Q
    ||||||||| ||||||||||||||||||||||||    
T  39002077 ataattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 41961644 - 41961701
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||| |||||  ||||||||| |||| ||||||| ||||||||||||||    
T  41961644 ccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattatta 41961701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 49505168 - 49505205
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  49505168 ataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 11610561 - 11610529
Alignment:
Q  64 tacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||||| |||||||||    
T  11610561 tacactgaattatgtgatttttttaaattatta 11610529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 15544744 - 15544692
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    |||| |||||||| || ||||||||||||||| ||||||||||| | ||||||    
T  15544744 acacacataattatacagaattatgtgattttatcaaattattagcggtgtca 15544692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 15812835 - 15812871
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatt 95  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  15812835 ataattacactgagttatgtgattttctcaaattatt 15812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 22774132 - 22774167
Alignment:
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||| ||||||||||||||||||||||||||||    
T  22774132 cgtgtctg-tgtctgtgtccgtatccgtgcttcatag 22774167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 26492220 - 26492256
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||| | |||||||||||||||||||    
T  26492220 taattacactgaattgtatgattttttcaaattatta 26492256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 30994896 - 30994940
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||||||||||| ||||||||| | ||||||||| ||||||    
T  30994896 ataattacactgaattgtgtgattttcttaaattattagcagtgt 30994940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 40052367 - 40052327
Alignment:
Q  69 tgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||||| | ||||| ||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgt 40052327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 55213007 - 55212963
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||| |||| |||||||||||||||| ||||||||||| |||||    
T  55213007 taattgcactaaattatgtgattttttaaaattattaactgtgtc 55212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 3947745 - 3947877
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    ||||||||||||||||||||||| |||  |||||  |||||||||||||||||| |||||||||||||||||| | ||||| ||      ||||||||||    
T  3947745 ggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggc------atgtccgtgt 3947838  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatagtat 163  Q
    | ||| || |||| ||||||||||| | ||||||||||||    
T  3947839 c-tgtgtggtgtccgtgtccgtatctgagcttcatagtat 3947877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 23292970 - 23293101
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    |||||||||||||||||||||| |     |||||  |||||| |||||||||||||||||||||||||||||| | ||||| ||||     |||||||||    
T  23292970 ggacacgtgtcgtgtccgacaccg-----acacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgt 23293064  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||| | |||| ||||||||||| |||||||||||    
T  23293065 cgtgtccggtgtccgtgtccgtatctgtgcttcatag 23293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 19482733 - 19482612
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| |||||  ||||||||| |||||||||||| ||||||||||||||   ||||| ||||     |||| |||||||||||| ||||||    
T  19482733 ccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctg 19482634  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    ||| ||||||||||||||||||    
T  19482633 tgttcgtatccgtgcttcatag 19482612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 54580007 - 54580091
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt 113  Q
    |||||||||||||||||||||| |     ||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  54580007 ggacacgtgtcgtgtccgacaccg-----acacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgtccgt 54580091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 11596348 - 11596403
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattatta 11596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 12895101 - 12895167
Alignment:
Q  30 gtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||| |||||  |||||||  ||||||||||||||||||||||||||||    
T  12895101 gtgtcgtgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattatta 12895167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 14126119 - 14126224
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtg 152  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||||     |||| ||||||||||   |||||||||| |||||  ||    
T  14126119 acacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtccactgtctgtgtctgtatctatg 14126218  T
Q  153 cttcat 158  Q
    ||||||    
T  14126219 cttcat 14126224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 15029810 - 15029760
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  15029810 ataattacactgaattatgtgatattttcaaattattagcagtgtctgcgt 15029760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 27706192 - 27706286
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgct 154  Q
    |||||||||| |||||||||||||||| ||||||||||  |||||  |||     ||||| ||||||||||| |||| |||||||||||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 21873384 - 21873478
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    ||||||| ||||||||||||||||||| ||||||||||  |||||||||        |||||||||||||||  ||||| ||||| |||||||||||| |    
T  21873384 cataatttcactgaattatgtgattttatcaaattatttgcagtgtcag--------tgtccgtgtcgtgtccaatgtccgtgtctgtatccgtgcttaa 21873475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 21929245 - 21929339
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    ||||||| ||||||||||||||||||| ||||||||||  |||||||||        |||||||||||||||  ||||| ||||| |||||||||||| |    
T  21929245 cataatttcactgaattatgtgattttatcaaattatttgcagtgtcag--------tgtccgtgtcgtgtccaatgtccgtgtctgtatccgtgcttaa 21929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 22440614 - 22440659
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||    
T  22440614 ataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 24343552 - 24343451
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||| ||||| ||||||||||| | ||||| ||||      |||||||||||||| | |||| ||||| || ||||||||||||    
T  24343552 ataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcat 24343453  T
Q  159 ag 160  Q
    ||    
T  24343452 ag 24343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 24999090 - 24999041
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagc 107  Q
    ||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  24999090 cataattacactgaattgtgtgattttttcaaattatcaactgtgtcagc 24999041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 36635369 - 36635268
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||||||||| |||||||||||   ||||  ||||     |||||| |||||||| | ||||||||||| ||||| ||||||||    
T  36635369 ataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatgcttcat 36635270  T
Q  159 ag 160  Q
    ||    
T  36635269 ag 36635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 28964263 - 28964299
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  28964263 taattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 29205488 - 29205452
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  29205488 taattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 40179650 - 40179746
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgctt 155  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||| |||     |||||||||| |||  | |||||| |||||||| |||||||    
T  40179650 ataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctgagtccgtatgcgtgctt 40179746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 903967 - 903928
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaac 98  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  903967 ataattacactgaattatgtgattttctcaaattattaac 903928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 15659752 - 15659818
Alignment:
Q  37 gtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||||| |||| ||||  |||||||||| |||||||| |||||| ||||||||||| ||||||    
T  15659752 gtccgacacgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgt 15659818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 20633526 - 20633429
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||| ||||||||||   ||||||||||||||| | |||||  |||     ||||||| ||||||||| |||| ||||||||||||||||||||||    
T  20633526 taattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcata 20633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 42640573 - 42640476
Alignment:
Q  60 taattacactgaattatgtgatttttt---caaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttc 156  Q
    |||||||||||||||||||||||||||   |||||||| | | ||||| ||||      |||||||| |||||  ||||| |||||||||||||||||||    
T  42640573 taattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgt------gtccgtgttgtgtccaatgtccgtgtccgtatccgtgcttc 42640480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 49431101 - 49431020
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgatt-ttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||| |     |||||  ||||||||||||||||||||||| |||||||||||||| | ||||| ||||    
T  49431101 ggacacgtgtcgtgtccgacaccg-----acacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgt 49431020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 56257979 - 56257933
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  56257979 cataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 4157147 - 4157102
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||    
T  4157147 tgtctgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcatag 4157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 6485626 - 6485663
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaa 97  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6485626 taattacactaaattatgtgattttttcaaattattaa 6485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 8423732 - 8423769
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8423732 ataattacactgaattatgtgattttctcaaattatta 8423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 30982872 - 30982929
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||| ||||| |||||||||||||| ||||||||||| |||||| ||||    
T  30982872 ccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcatta 30982929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 12895277 - 12895325
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||| ||||||||||  ||||||||||||||||||||||||||    
T  12895277 caccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 14465090 - 14465126
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| ||||||||||||||||||||||||||||    
T  14465090 taattacattgaattatgtgattttttcaaattatta 14465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 16189765 - 16189721
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaatt 92  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatt 16189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 21945547 - 21945511
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| |||||||||||||||||    
T  21945547 taattacactgaattatgtcattttttcaaattatta 21945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 32273509 - 32273577
Alignment:
Q  28 acgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||| || || | | ||| |||||||  ||||||||||| |||||||||||||||||    
T  32273509 acgtgtcgtgtccgactcgacatcgaaacttataattattctgaattatgttattttttcaaattatta 32273577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 35157988 - 35158036
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  35157988 caccgacacttataattacactaaattatgtgatttttccaaattatta 35158036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 2234296 - 2234245
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||| |||||||||||||||| ||||||||| ||| ||| ||||||    
T  2234296 cataattacattgaattatgtgattttctcaaattatcaacggtgacagcgt 2234245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 2361990 - 2362092
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtc--gtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    |||||||||| |||||||| ||||||||||||||||| | ||||| | ||    |||||  ||||  |||||||||||  |||||||||||||| |||||    
T  2361990 taattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtgtgtctgatgttcgtgtccgtatccgtacttca 2362089  T
Q  158 tag 160  Q
    |||    
T  2362090 tag 2362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 32910602 - 32910559
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||    
T  32910602 acacccataattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 44081573 - 44081692
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtg 140  Q
    ||||||||||  ||||  ||||||||| | |||||| |||||||||||||||||||||  | || | ||     ||||| ||||||||| |||||  |||    
T  44081573 gacacggcactgacacatataattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtg 44081672  T
Q  141 tccgtatccgtgcttcatag 160  Q
    |||||||| |||||||||||    
T  44081673 tccgtatcggtgcttcatag 44081692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 1213235 - 1213280
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||    
T  1213235 ataattacactgaattatataatttttt-aaattattaacagtgtca 1213280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 5775372 - 5775410
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaa 97  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  5775372 ataattacacttaattatgtgattttctcaaattattaa 5775410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 12077869 - 12077831
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagt 101  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  12077869 ttacattgaattatgtgattttctcaaattattaacagt 12077831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 160
Target Start/End: Complemental strand, 12708128 - 12708090
Alignment:
Q  122 gtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  12708128 gtcgtgtctgatgtccgtgtccgtattcgtgcttcatag 12708090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 17425402 - 17425440
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  17425402 cataattacactgaattatgcgattttctcaaattatta 17425440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 40613495 - 40613445
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||| ||||| ||||| | ||||| ||||    
T  40613495 ataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgt 40613445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 9996885 - 9996840
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||| |||||||||||||||||| ||||||||||  |||||||    
T  9996885 ataattatactgaattatgtgattttctcaaattattgtcagtgtc 9996840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 11931321 - 11931280
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||| |||||||||||||||||| ||||||||| |||||    
T  11931321 ttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 37203317 - 37203272
Alignment:
Q  51 ctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||  |||||||||| |||||||| |||||||||||||||||    
T  37203317 ctacacttgtaattacactaaattatgtcattttttcaaattatta 37203272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 40481716 - 40481645
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcaccta-cactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||| | || || ||||  |||||||||||||||||||||| ||||||||||||||    
T  40481716 ggacacgtgtcgtgtccaacaccg-acataacacttgtaattacactgaattatgtgat-ttttcaaattatta 40481645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 51701323 - 51701266
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||  |||||  |||||||||| |||||||| |||||||||||||||||    
T  51701323 ccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattatta 51701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 4383411 - 4383376
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4383411 taattacactgaattatgtgat-ttttcaaattatta 4383376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 6863198 - 6863154
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  6863198 ataattgcaccgaattatatgattttttcaaattattaacggtgt 6863154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 12224210 - 12224242
Alignment:
Q  60 taattacactgaattatgtgattttttcaaatt 92  Q
    ||||||||||||||||||||||||||| |||||    
T  12224210 taattacactgaattatgtgatttttttaaatt 12224242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 12797353 - 12797388
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12797353 taattacactgaattatgtga-tttttcaaattatta 12797388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 38847027 - 38847063
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||| || |||||||||||||||||||    
T  38847027 taattacactgaataatatgattttttcaaattatta 38847063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 47264030 - 47263994
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  47264030 taattacacagaattatgtgatttttacaaattatta 47263994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 43001879 - 43001800
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||||  |||| |||||  ||||||||||||||||||| ||||||||||||||||| |||||||    
T  43001879 gacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtc 43001800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 31084403 - 31084318
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||| || | |||||  |||||||| |||||||||||||||||||||||||||| | ||||| ||||    
T  31084403 ggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgt 31084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 13287395 - 13287509
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtg 140  Q
    |||||| |||| |||||  || |||||||||||||||||||||||||||||||||| | |||||  |||     ||||||||||||||| | |||| |||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtg 13287494  T
Q  141 tccgtatccgtgctt 155  Q
    |||||||||||||||    
T  13287495 tccgtatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 21522815 - 21522694
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| ||| |  ||||||||||||||||||| ||||||| ||||||||| | ||||| ||||     ||||||||||||||| | || | |    
T  21522815 ccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccg 21522716  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||||||||||    
T  21522715 tgtccgtatccgtgcttcatag 21522694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 21533381 - 21533260
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| ||| |  ||||||||||||||||||| ||||||| ||||||||| | ||||| ||||     ||||||||||||||| | || | |    
T  21533381 ccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccg 21533282  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||||||||||    
T  21533281 tgtccgtatccgtgcttcatag 21533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 15382560 - 15382421
Alignment:
Q  24 ggacacgtgtcgtgtccgacacgg-cacctacactcataattacactgaattatgtgatttttt--caaattattaacagtgtcagcgtccgtatgtccg 120  Q
    ||||| ||||||||||| |||| | |||| |||||  |||||| |||||||||| |||||||||  |||||||||| | ||||| ||||     ||||||    
T  15382560 ggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccg 15382461  T
Q  121 tgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||| | |||| |||||||||||||||||||||||    
T  15382460 tgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 15382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 23015968 - 23016106
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt--atgtccgt 121  Q
    |||||| |||||||||||| ||  || | ||||  |||||||||||||||||||||||||| |||||| ||||||  |||||| |   ||   |||||||    
T  23015968 ggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtcagagagtgtcggtgtccgt 23016067  T
Q  122 gtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||| |  ||| |||||||||||||||||||||||    
T  23016068 gtcgtgtccggagtccgtgtccgtatccgtgcttcatag 23016106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 39698606 - 39698536
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| |||  |||||  ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  39698606 ccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgt 39698536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 6471880 - 6471957
Alignment:
Q  36 tgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt 113  Q
    ||||| ||||| |||| ||||  |||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||    
T  6471880 tgtcccacacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgtccgt 6471957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 17177038 - 17177138
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||| |||||| | ||||||||||||||||||| | ||||  ||||     |||||| ||||| |||| |||||||||||||||||||||||||||    
T  17177038 taattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgtatccgtgcttcata 17177137  T
Q  160 g 160  Q
    |    
T  17177138 g 17177138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 21191071 - 21191158
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtat 147  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| || |     ||||||||||||||| | |||| ||||||||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 36642735 - 36642876
Alignment:
Q  24 ggacacgtgtcgtgtccgacac------ggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgt 117  Q
    ||||||||||||||||||||||      | |||| ||||| ||| ||||||| || ||||| | ||||||||||||||||| ||||| ||||     |||    
T  36642735 ggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgt 36642834  T
Q  118 ccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||||||| | ||||| ||||||||||| ||||||||||    
T  36642835 ccgtgtcgtgtccggtgtct-tgtccgtatccatgcttcatag 36642876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 7677770 - 7677713
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||| |||||  ||||| |||||||||||||||||||||||||||||||    
T  7677770 ccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattatta 7677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 39205957 - 39205880
Alignment:
Q  27 cacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||||| |||||| |||| ||||  ||||||||||  |||||| ||||||| ||||||||||| |||||||    
T  39205957 cacgtgtcgtgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtc 39205880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 6247666 - 6247630
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  6247666 taattacactgaattatgtgattttttcaaattatta 6247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 21576760 - 21576796
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattatta 21576796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 4344784 - 4344737
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  4344784 attacactgaattatgtcattttttcaaattattatcggtgtcagcgt 4344737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 19579764 - 19579645
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtg 140  Q
    |||||| |||| |||||  ||||| |||| |||||||||||||| ||||||||||| | ||||| ||||     ||||||||| || || | |||| |||    
T  19579764 gacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtg 19579665  T
Q  141 tccgtatccgtgcttcatag 160  Q
    | ||||||||||||||||||    
T  19579664 tacgtatccgtgcttcatag 19579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 21542095 - 21541984
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| |||||  ||||||||||||||||||| || |||| |||||||||   ||||| || |    ||||| |||||||||||| |||| |    
T  21542095 ccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtccg 21541996  T
Q  139 tgtccgtatccg 150  Q
    ||||||||||||    
T  21541995 tgtccgtatccg 21541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 24273044 - 24273091
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||    
T  24273044 ataattacactgaattatgtgattttctcaaattaataactgtgtcag 24273091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 24389170 - 24389123
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||    
T  24389170 ataattacactgaattatgtgattttctcaaattaataactgtgtcag 24389123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 38749551 - 38749614
Alignment:
Q  33 tcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||  |||| ||||  ||||||||| |||||||||| |||||||||||||||||    
T  38749551 tcgtgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 40000555 - 40000594
Alignment:
Q  65 acactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtc 40000594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 28588688 - 28588738
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  28588688 ataattacactgaattatgtgattttctcaaattattaccggtgtcggcgt 28588738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 5467992 - 5468029
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| |||||||||||    
T  5467992 ataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 14674313 - 14674264
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||| |||||||||||||||||||||||||| | ||||| ||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgt 14674264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 19552562 - 19552607
Alignment:
Q  64 tacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgt 19552607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 40131666 - 40131629
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  40131666 ataattaaactgaattatgtgattttttcaaattatta 40131629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 41091271 - 41091316
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||    
T  41091271 ataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 24906316 - 24906352
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24906316 taattacactgaattatgtcattttttcaaattatta 24906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 41995534 - 41995417
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||| |||||||| |||||  |||||||| ||||||||||||||||||| ||||||||   ||||| ||||     |||| ||||||| ||   |||| |    
T  41995534 ccgatacggcaccgacact--taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccg 41995437  T
Q  139 tgtccgtatccgtgcttcat 158  Q
    ||||||||||||||||||||    
T  41995436 tgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 42893404 - 42893368
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| |||||||||||||||||||||||||    
T  42893404 taattacactggattatgtgattttttcaaattatta 42893368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 3966566 - 3966511
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| |||| ||||  |||||||||||||||| ||||||||| |||||||||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattatta 3966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 30098371 - 30098332
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaac 98  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  30098371 ataattacattgaattatgtgattttctcaaattattaac 30098332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 4105314 - 4105265
Alignment:
Q  49 acctacactcataattacactgaattatgtga--ttttttcaaattatta 96  Q
    |||||||||  |||||||||||||||||||||  ||||||||||||||||    
T  4105314 acctacacttgtaattacactgaattatgtgatcttttttcaaattatta 4105265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 10298639 - 10298577
Alignment:
Q  34 cgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||| ||| |||| |||||  |||||||| || ||||||||| |||||||||||||||    
T  10298639 cgtgtccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattatta 10298577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 14873597 - 14873527
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattat 94  Q
    |||||||||| | |||||||| | |||| ||||  ||||||||||| ||||||||| |||| |||||||||    
T  14873597 ggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 15410465 - 15410563
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||||||| || | ||||| | ||||||||| | ||||| ||||     ||||||||||||||||||||||   ||||||||||||| |||||||    
T  15410465 attacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgatgtccacgtccgtatccgtgtttcatag 15410563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 33035815 - 33035853
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaa 97  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  33035815 ataattacactgaattatatgatttattcaaattattaa 33035853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 43564937 - 43564891
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattat 94  Q
    |||| ||||| ||||||||||| ||||||||||||||| ||||||||    
T  43564937 caccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 16203809 - 16203854
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  16203809 ataattacactaaattatgagattttctcaaattattagcagtgtc 16203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 17593736 - 17593773
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  17593736 ataattacactgaattacgtgattttctcaaattatta 17593773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 18421855 - 18421900
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||| ||||||||||||| ||||||||| | |||||||    
T  18421855 ataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 19438386 - 19438353
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattat 94  Q
    |||||||||||||||||||||||| |||||||||    
T  19438386 aattacactgaattatgtgattttctcaaattat 19438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 20683370 - 20683325
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||| | |||| |||||||||||||||||| ||||    
T  20683370 tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctttatag 20683325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 21351899 - 21351956
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| | |||| |||||  ||||||||||||||||||||| |||||| ||||||||    
T  21351899 ccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattatta 21351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 27932279 - 27932230
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||| ||||| ||||||||||| | ||||| ||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 27932230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 30502402 - 30502439
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  30502402 ataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 30542745 - 30542782
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  30542745 ataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 35017082 - 35017045
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  35017082 ataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 41794090 - 41794131
Alignment:
Q  58 cataattacactgaattatgtga-ttttttcaaattattaac 98  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  41794090 cataattacactggattatgtgatttttttcaaattattaac 41794131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 7218282 - 7218318
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||| || |||||||||    
T  7218282 taattacactgaattatgtgatttatttaaattatta 7218318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 8420071 - 8420035
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||||||||| |||||||||||||||||    
T  8420071 taattacattgaattatgttattttttcaaattatta 8420035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 15405070 - 15405106
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||||||| |||||||||||||||||||    
T  15405070 taattacattgaattatatgattttttcaaattatta 15405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 22611761 - 22611801
Alignment:
Q  69 tgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||||||||  |||||| ||||    
T  22611761 tgaattatgtgattttttcaaattattaggagtgtcggcgt 22611801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 28862302 - 28862262
Alignment:
Q  119 cgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  28862302 cgtgtcgtgtccgatgtccgtgtccatatccgtgcttcata 28862262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 33178069 - 33178033
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| |||||||||||||||| |||||||||    
T  33178069 taattacactaaattatgtgatttttttaaattatta 33178033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 37328838 - 37328894
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatt 95  Q
    |||||||| |||| ||||   ||||||||||||||| |||||||||| |||||||||    
T  37328838 ccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatt 37328894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 41633779 - 41633743
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| | |||||||||||||||    
T  41633779 taattacactgaattatgtaaatttttcaaattatta 41633743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 21616807 - 21616708
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| ||||     |||||||||||||||   ||||||||||||||||||||||||||    
T  21616807 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 2438734 - 2438832
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||||||| |  |||||||||  |||| | |||| ||||||||||||||||||||||    
T  2438734 taattacactgaattatgtgattttttgaaattattagctgtgtcagcgtcag--tgtccgtgttttgtccggtgtc-gtgtccgtatccgtgcttcata 2438830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 30335461 - 30335361
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||||| |||||||| |||||||||||||||||   ||||| |||| |   ||||||||||||||||||  || ||||||||||||||||||||||    
T  30335461 taattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgtgtccgtatccgtgcttcata 30335362  T
Q  160 g 160  Q
    |    
T  30335361 g 30335361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 28412396 - 28412293
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||   |||     ||||||||||||||||| |||| |||||| ||| |||||||||    
T  28412396 cataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttca 28412297  T
Q  158 tagt 161  Q
    ||||    
T  28412296 tagt 28412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 12668417 - 12668474
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  12668417 ccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 30404865 - 30404914
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgt 30404914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 44860382 - 44860273
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgt 141  Q
    ||||| |||| ||||  ||||||||||||||||||| |||||| ||||||||||| | |||||||        ||||||||||||||||| |||  || |    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcag--------tgtccgtgtcgtgtctggtgtacgtat 44860291  T
Q  142 ccgtatccgtgcttcata 159  Q
    ||||||||||||||||||    
T  44860290 ccgtatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 974826 - 974755
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||||||||| ||||| |||| |||||  |||||||||||||| ||||||| ||||||||||||||    
T  974826 gacacatgtcgtgtccaacacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattatta 974755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 15972948 - 15972826
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    |||||||||||||||||||||| |     |||||  ||||||||||||||| ||| ||||||||||||||||||  ||||| ||||     |||||||||    
T  15972948 ggacacgtgtcgtgtccgacaccg-----acacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgt 15972854  T
Q  124 cgtgtctgatgtctgtgtccgtatccgt 151  Q
    ||| |||| |||||||||| || |||||    
T  15972853 cgtatctggtgtctgtgtctgtgtccgt 15972826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 21782831 - 21782882
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  21782831 cataattacactgaattatgtgattttctcaaattattagcagtgtcggcgt 21782882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 28677954 - 28677904
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  28677954 ataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 29176496 - 29176557
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||| ||||| ||||||||||||||||||||||  |||||||||||||||| ||||| ||||    
T  29176496 caccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgt 29176557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 40361768 - 40361869
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtca--gcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttc 156  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||  | |||||||| |  |||||||||  | | || |||||||||||| ||||||    
T  40361768 ataattacactaaattatgtaattttttcaaattattaatagtgtcatagtgtccgtatct--gtgtcgtgttcggtatccgtgtccgtatccatgcttc 40361865  T
Q  157 atag 160  Q
    ||||    
T  40361866 atag 40361869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 23058436 - 23058556
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtga-ttttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtct 137  Q
    |||||||| |||| |||||  ||||||||||| ||||||||| |||||||||||||||||  ||||  ||||     ||||||||||||||| | | ||     
T  23058436 ccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtcaggtatcc 23058535  T
Q  138 gtgtccgtatccgtgcttcat 158  Q
    |||||||| ||||||||||||    
T  23058536 gtgtccgtgtccgtgcttcat 23058556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 30717545 - 30717581
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  30717545 taattacactgaattatgtgattttttcaaattatta 30717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 35449558 - 35449514
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||    
T  35449558 ataattacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 2331840 - 2331753
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgt 145  Q
    ||||| ||||||||||||||||||||| ||||||||||||  ||||  ||||    |||||||||||| ||  |||||||||||||||    
T  2331840 cataaatacactgaattatgtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgatgtctgtgtccgt 2331753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 18276577 - 18276466
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtat 147  Q
    |||| |||| |||||||||||||||||| |||||||| ||||||||||| | ||||| || |     |||| || ||||||| | |||| ||||| ||||    
T  18276577 caccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtat 18276478  T
Q  148 ccgtgcttcata 159  Q
    ||||||||||||    
T  18276477 ccgtgcttcata 18276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 21374714 - 21374810
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt-cgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||| |||      |||  |||| |||||| | |||| |||||||||||||||||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcg------tgttagtgtccgtgtccggtgtccgtgtccgtatccgtgcttcat 21374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 16069268 - 16069318
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||| ||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgt 16069318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 24894458 - 24894384
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||  ||| |||||  ||||| ||||||||||||||||||||| ||||||||| | ||||| ||||    
T  24894458 gtgtccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgt 24894384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 31284093 - 31283991
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    ||||||||| || ||||||||||||| ||||||||||| ||||||| ||||     ||| |||||  |||| | |||| ||||||||||| |||||||||    
T  31284093 ataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcat 31283994  T
Q  159 agt 161  Q
    |||    
T  31283993 agt 31283991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 36756341 - 36756395
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattatta 36756395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 11223878 - 11223927
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  11223878 taattacactgaattatgttattttttcaaaatattagctgtgtcagcgt 11223927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 12940950 - 12940986
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||||||||||||||||||    
T  12940950 taattacactgaattatatgattttttcaaattatta 12940986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 15657908 - 15657872
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15657908 taattacactgaattatgtgatttttacaaattatta 15657872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 30527609 - 30527653
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||    
T  30527609 ataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 36409640 - 36409676
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattat 94  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36409640 cataattacactaaattatgtgattttttcaaattat 36409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 37419808 - 37419752
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatt 95  Q
    |||||||| ||||  ||||  ||||||||||||||| ||||||||||||||||||||    
T  37419808 ccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 18420437 - 18420492
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||| ||||| |||||| || |||||||||||||||| ||||||||||| ||||||    
T  18420437 caccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgt 18420492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 18622669 - 18622614
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| |||| ||||  |||||||||||||||||||||||||| | |||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 23921298 - 23921259
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaac 98  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  23921298 ataattacactgaattatgtaattttctcaaattattaac 23921259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 34337202 - 34337289
Alignment:
Q  71 aattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |  | | || ||||||||||||||| |||||    
T  34337202 aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgtgtccgtatccgtgattcat 34337289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 4332972 - 4332926
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||| ||||||||||||||||  |||||||||| |||||||    
T  4332972 cataattacattgaattatgtgattttcccaaattattatcagtgtc 4332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 5473370 - 5473336
Alignment:
Q  62 attacactgaattatgtgattttttcaaattatta 96  Q
    ||||||| |||||||||||||||||||||||||||    
T  5473370 attacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 18422007 - 18421914
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgct 154  Q
    |||||||||||||||||||||| |||| ||||||||||  ||||| ||||     |||||||||||| || ||||||  ||||||||||| ||||    
T  18422007 taattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgatgtc-atgtccgtatccatgct 18421914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 20539672 - 20539783
Alignment:
Q  43 cacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtc 142  Q
    |||| |||| |||||  |||||||||| |||||| ||||||||||||||||||| | |||||  |||     |||||||||||||||      | |||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtc------cagtgtc 20539765  T
Q  143 cgtatccgtgcttcatag 160  Q
    ||||||||||||||||||    
T  20539766 cgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 22084848 - 22084890
Alignment:
Q  61 aattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||    
T  22084848 aattacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 5367237 - 5367200
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||  |||||||||||    
T  5367237 ataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 18841028 - 18841077
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||| |||||||| |||||||||||||||||   ||||||||||    
T  18841028 taattacacttaattatgtaattttttcaaattattagttgtgtcagcgt 18841077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 19536412 - 19536449
Alignment:
Q  60 taattacactgaattatgtga-ttttttcaaattatta 96  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  19536412 taattacactgaattatgtgatttttttcaaattatta 19536449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 23718071 - 23718034
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  23718071 ataattacactgaattatgtgactttctcaaattatta 23718034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 24105743 - 24105706
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  24105743 ataattacactgaattatgtgactttctcaaattatta 24105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 25846786 - 25846749
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  25846786 ataattacactgaatcatgtgattttctcaaattatta 25846749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 26769506 - 26769461
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||| |||||||||| | |||| |||||||||||||||||||||||    
T  26769506 tgtctgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 26769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 31808122 - 31808085
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| | |||||||||    
T  31808122 ataattacactgaattatgtgattttgttaaattatta 31808085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 34691819 - 34691856
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  34691819 ataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 34714231 - 34714268
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  34714231 ataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 34785052 - 34785097
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||||||||||||  ||| ||||||||||| |||||||||||    
T  34785052 tgtccgtgtcgtgtctggggtccgtgtccgtatctgtgcttcatag 34785097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 37411258 - 37411295
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  37411258 ataatcacactgaattatgtgattttctcaaattatta 37411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 37559021 - 37558972
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| ||||||||||||||||| |||||||||| | ||||| ||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgt 37558972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 38117174 - 38117223
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||| ||| ||||||||||||||||||||||| | ||||| ||||    
T  38117174 taattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgt 38117223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 10535767 - 10535823
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| || ||||||||||||||||| ||||| ||||||||||| | ||||| ||||    
T  10535767 acacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgt 10535823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 11308021 - 11308053
Alignment:
Q  62 attacactgaattatgtgattttttcaaattat 94  Q
    ||||||||||||||||| |||||||||||||||    
T  11308021 attacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 14996204 - 14996275
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgatttt-ttcaaattatta 96  Q
    ||||||||| |||||||||| | |||| |||||  |||||||||| |||||| ||||||| ||||||||||||    
T  14996204 gacacgtgt-gtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattatta 14996275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 19959850 - 19959810
Alignment:
Q  69 tgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||| |||||||||||||  |||||||||    
T  19959850 tgaattatgtgattttgtcaaattattaacgatgtcagcgt 19959810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 32199154 - 32199202
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagc 107  Q
    ||||||| ||| |||||||||||||| ||||||||||||| ||| ||||    
T  32199154 ataattatacttaattatgtgattttatcaaattattaactgtgacagc 32199202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 33153468 - 33153432
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  33153468 taattacactgaattatgtgatttttttaaatcatta 33153432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 36281727 - 36281691
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaac 98  Q
    |||||||| |||||||||||||| |||||||||||||    
T  36281727 attacactaaattatgtgattttctcaaattattaac 36281691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 39279720 - 39279676
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||||||||||||| ||||||| ||| ||||||||| ||||    
T  39279720 ataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 39323308 - 39323272
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattatta 39323272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 42832279 - 42832327
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||| |||||||||||||| ||||| ||||| |||||||||||    
T  42832279 caccgacacttataattacactgaaatatgtaattttctcaaattatta 42832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 130539 - 130425
Alignment:
Q  47 gcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgta 146  Q
    ||||| |||||  ||||||||||||||||||||||||||||||| ||||||| ||||| || |     ||||||||||||||| | |||| |||||||||    
T  130539 gcaccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgta 130440  T
Q  147 tccgtgcttcatagt 161  Q
    ||| |||||||||||    
T  130439 tccatgcttcatagt 130425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 24858093 - 24857954
Alignment:
Q  22 tgggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgatttttt---caaattattaacagtgtcagcgtccgtatgtc 118  Q
    |||||||| |||||||||||||||| || | |||||  || ||||||||||||||||||||||||   |||||||||||| ||||| ||||    |||||    
T  24858093 tgggacacatgtcgtgtccgacacgacaacgacacttgta-ttacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtc 24857995  T
Q  119 cgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||| | |||  |||||||||||||| |||||||    
T  24857994 cgtgtcgtgtccggtgttcgtgtccgtatccgttcttcata 24857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 22652041 - 22651920
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||| |||| |||||  |||||| | |||||||||||||||||||||||||||| | ||||| ||||     ||||||||||||||| | |||| |    
T  22652041 ccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcag 22651942  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    ||||||||||||| ||||||||    
T  22651941 tgtccgtatccgtacttcatag 22651920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 11927083 - 11927150
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| |||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 25566903 - 25566787
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgt---atgtccgtgtcgtgtctgatgtctg 138  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||   |||||||    ||||||| |||||     
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtctgtgtcatgtccg----gtgtctg-tgtcta 25566809  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    | ||||||||||||||||||||    
T  25566808 tatccgtatccgtgcttcatag 25566787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 29510298 - 29510419
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctg 138  Q
    |||||||  |||| |||||  |||||| |||||||| ||||||||||||||||||||| | ||||| ||||     ||||||||||||||| | ||||      
T  29510298 ccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcca 29510397  T
Q  139 tgtccgtatccgtgcttcatag 160  Q
    |||| |||||||||||||||||    
T  29510398 tgtcagtatccgtgcttcatag 29510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 24413567 - 24413675
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaa-ttattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgt 151  Q
    ||||| |||||||| |||||||||||  |||| ||||| |||||||| |||||||  |     ||||||||||||||||| |||| ||||||||||||||    
T  24413567 acacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatccgt 24413666  T
Q  152 gcttcatag 160  Q
    |||||||||    
T  24413667 gcttcatag 24413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 11803304 - 11803257
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcag 106  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
T  11803304 ataattacactgaattatgtgattttcttaaattattaacagtgtcag 11803257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 11944727 - 11944660
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||| |||| ||||  ||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgt 11944660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 15816126 - 15816180
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattatta 15816180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 41831958 - 41831999
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgtc 41831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 4948696 - 4948660
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  4948696 taattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 36450757 - 36450805
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  36450757 cacctacacttgtaattacactgaattctgtgattttttcaaattatta 36450805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 36934715 - 36934615
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    ||||||||| ||||||||||||||||||| |||||||| | |||||  |||     |||||||||||||| || ||| ||| ||||||||| ||||||||    
T  36934715 ataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgtatccatgcttcat 36934616  T
Q  159 a 159  Q
    |    
T  36934615 a 36934615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 926791 - 926902
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtat 147  Q
    |||| ||||| ||||||||||||||  ||| |||||| |||||||||||  |||||  ||||     ||||||||||||||| | |||| |||| |||||    
T  926791 caccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtat 926890  T
Q  148 ccgtgcttcata 159  Q
    ||||||||||||    
T  926891 ccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 2572052 - 2572107
Alignment:
Q  41 gacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||| |||| |||||  |||||||||| ||||||||||||||||||||||||||    
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 3025625 - 3025559
Alignment:
Q  25 gacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||||||| |     ||||  |||||||||||||||||||||||||| |||||||||||    
T  3025625 gacacgtgtcgtgtccgacactg-----acacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 4673440 - 4673538
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    ||||||||||||||| | ||||||||||||||||||| | ||||| ||||     |||| |||||||||| |||||| || ||||||| |||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgtat-cgtgcttcata 4673538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 37283823 - 37283926
Alignment:
Q  58 cataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    ||||||||||||||||||||||||||| ||| ||||||| | ||| | || |     |||||||||| |||||| ||||  ||| |||||||||||||||    
T  37283823 cataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccgtgcttca 37283922  T
Q  158 tagt 161  Q
    ||||    
T  37283923 tagt 37283926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 44067567 - 44067460
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtg 152  Q
    ||||| |||||||||||| ||||||| ||||| ||||||||||| | ||||| ||||     |||| |||| ||||||| |||| ||||| || ||||||    
T  44067567 acacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccgtg 44067468  T
Q  153 cttcatag 160  Q
    ||||||||    
T  44067467 cttcatag 44067460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 13844610 - 13844660
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  13844610 ataattacactcaattatgtgattttctcaaattattagcagtgtcggcgt 13844660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 31236591 - 31236641
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||| ||||    
T  31236591 ataattacattgaattatgtgattttctcaaattattagcagtgtcggcgt 31236641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 40332268 - 40332191
Alignment:
Q  22 tgggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||||||||||| |||| |     |||||  ||||||||||||||||||||||||| ||||||||||  |||||||    
T  40332268 tgggacacgtgtcgtgtcccacaccg-----acacttgtaattacactgaattatgtgattttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 3951599 - 3951644
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||||||||| |||| |||| |||||||||||||||||||||||    
T  3951599 tgtccgtgtcgtatctggtgtccgtgtccgtatccgtgcttcatag 3951644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 4298901 - 4298950
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| | |||||||||||||||||||||||||||| ||||| ||||    
T  4298901 taattacattaaattatgtgattttttcaaattattaactgtgtcggcgt 4298950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 14134744 - 14134707
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14134744 ataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 14731757 - 14731712
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||    
T  14731757 ataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 24362216 - 24362317
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||||||| | ||||||||||| | ||||| ||||     |||| ||||||| || | |||| || |||||||| |||||||||    
T  24362216 ataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcat 24362315  T
Q  159 ag 160  Q
    ||    
T  24362316 ag 24362317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 24669477 - 24669428
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||| ||||  ||||||||||||| ||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtcagcgt 24669428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 31557040 - 31556992
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  31557040 taattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgt 31556992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 34897130 - 34897093
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||| |||||||||||    
T  34897130 ataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 4786352 - 4786445
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    |||||||||||||||||||||||||| | ||||||||||  ||||| |||      |||| |||||||||  | |||| ||||| |||||||||||||||    
T  4786352 ataattacactgaattatgtgattttcttaaattattaatggtgtcggcg------tgtcagtgtcgtgttcggtgtcagtgtctgtatccgtgcttcat 4786445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 8343016 - 8342980
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8343016 taattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 8343360 - 8343324
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattatta 8343324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 20679398 - 20679446
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    |||| ||||| |||||||||||||| ||||||||||| |||||||||||    
T  20679398 caccgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 20873113 - 20873077
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||| ||||||||||||||||||||||||||    
T  20873113 taattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 30077402 - 30077438
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||| ||||||||||||||    
T  30077402 taattacactgaattatgtgatgttttcaaattatta 30077438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 25192348 - 25192411
Alignment:
Q  46 ggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||| ||||| ||||||| |||||||||||| | ||||||||||||||| | ||||| ||||    
T  25192348 ggcaccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgt 25192411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 4611579 - 4611481
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttca 157  Q
    |||||||||||||||||||| ||||| ||||||||||| | ||||| | || |    |||| ||| |||||  |||||| |||| ||||||||||||||    
T  4611579 ataattacactgaattatgttattttctcaaattattagcggtgtcggtgtgccggggtccatgttgtgtccaatgtctctgtctgtatccgtgcttca 4611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 13436958 - 13437028
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| |||| |||||  | |||||  |||||||||||||||||||||||||||| | ||||| ||||    
T  13436958 ccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgt 13437028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 27101553 - 27101459
Alignment:
Q  66 cactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||| |||||||||||||||||||||||||| | ||||| ||||    |||||| | |||| |  |||||| ||||| |||||| ||||||||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtccatatcgtattcgatgtcggtgtctgtatccatgcttcatag 27101459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 27213592 - 27213542
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||||| ||||    
T  27213592 ataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgt 27213542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 28642449 - 28642407
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    |||||||||||||||| | ||||||||||||||||| ||||||    
T  28642449 ttacactgaattatgtaaatttttcaaattattaaccgtgtca 28642407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 39954293 - 39954343
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||| |||||||||||||| ||||||||||| | ||||| ||||    
T  39954293 ataattacactaaattatgtgattttctcaaattattagcggtgtcggcgt 39954343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 7658508 - 7658471
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  7658508 ataattacactgaattatgtaattttctcaaattatta 7658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 12606843 - 12606888
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||| |||||||| ||||||| ||||||||||| |||||||    
T  12606843 ataattacattgaattatatgattttctcaaattattagcagtgtc 12606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 13203686 - 13203649
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  13203686 ataattacactgaattatgtaattttctcaaattatta 13203649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 18069193 - 18069238
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  18069193 tgtccgtgttgtgtcttgtgtctgtgtccatatccgtgcttcatag 18069238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 18964160 - 18964115
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||||| |||| ||||||||||| ||||| |||||    
T  18964160 tgtccgtgtcgtgtctggtgtccgtgtccgtatctgtgctacatag 18964115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 22197757 - 22197858
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcata 159  Q
    |||||||||| |||||||||| ||||||||||||||| | ||||  ||||     |||| |||||||||| | |||| |||||   ||||||||||||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtctagatccgtgcttcata 22197856  T
Q  160 gt 161  Q
    ||    
T  22197857 gt 22197858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 22596038 - 22595989
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||| ||||||| ||||||||| | ||||| ||||    
T  22596038 taattacactgaattatgttatttttttaaattattagctgtgtcggcgt 22595989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 28385008 - 28385053
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||||||||||| ||||| |||| ||||||||| |||||    
T  28385008 ataattacactgaattatgagatttattcatattattaacggtgtc 28385053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 28745539 - 28745498
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||| |||||||||||| ||||||||||||||| |||||||    
T  28745539 ttacattgaattatgtgaatttttcaaattattagcagtgtc 28745498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 29776081 - 29776036
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||| ||||||||| |||||||| ||||||||||| |||||||    
T  29776081 ataattatactgaattacgtgattttctcaaattattagcagtgtc 29776036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 30271306 - 30271355
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||| |||||||||||||||||||| |||| | ||||| ||||    
T  30271306 taattacactgcattatgtgattttttcaaatgattagctgtgtcggcgt 30271355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 31580141 - 31580186
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||    
T  31580141 ataattacactcaattatgtgattttcttaaattattaacattgtc 31580186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 33405398 - 33405439
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacag 100  Q
    ||||||||||| ||||||||| |||| |||||||||||||||    
T  33405398 ataattacactaaattatgtgtttttctcaaattattaacag 33405439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 36107674 - 36107633
Alignment:
Q  69 tgaattatgtgatttttt-caaattattaacagtgtcagcgt 109  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  36107674 tgaattatgtgatttttttcaaattatgaacagtgtcagcgt 36107633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 43737883 - 43737928
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||||||||||||| | |||| ||||| |||||||||||||||||    
T  43737883 tgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 43737928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 8798845 - 8798889
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    ||||||| | |||||||||| ||||| ||||||||||||||||||    
T  8798845 ataattatattgaattatgttattttctcaaattattaacagtgt 8798889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 13018323 - 13018287
Alignment:
Q  62 attacactgaattatgtgattttttcaaattattaac 98  Q
    |||||||| |||||||||||||| |||||||||||||    
T  13018323 attacactaaattatgtgattttgtcaaattattaac 13018287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 18067954 - 18067994
Alignment:
Q  65 acactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    |||||||||||||||||||| ||||||||||| | ||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 18407763 - 18407727
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||  ||||||||    
T  18407763 taattacactgaattatgtgatttttttgaattatta 18407727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 22493536 - 22493504
Alignment:
Q  62 attacactgaattatgtgattttttcaaattat 94  Q
    ||||||||||||||||||||||||| |||||||    
T  22493536 attacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 477 - 575
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||| ||||     |||||||| |||||  | |||| |||||||||||||||||||||    
T  477 taattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 23494 - 23438
Alignment:
Q  30 gtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgatttttt 86  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  23494 gtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttt 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 23562 - 23529
Alignment:
Q  53 acactcataattacactgaattatgtgatttttt 86  Q
    ||||| ||||||||||||||||||||||||||||    
T  23562 acacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 8873 - 8742
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgt 123  Q
    |||||||||||||||||||||| |     |||||  |||||||||| ||| || ||||||||||||||||||| | ||||| ||||     |||||||||    
T  8873 ggacacgtgtcgtgtccgacaccg-----acacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 8779  T
Q  124 cgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    |||||| | |||| |||||||||||| ||||||||||    
T  8778 cgtgtccggtgtccgtgtccgtatccatgcttcatag 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 70353 - 70278
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    |||||||||||||||||||||| |     ||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  70353 ggacacgtgtcgtgtccgacaccg-----acacttataattacactgaattatgttattttttcaaattattaactgtgtc 70278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 53245 - 53189
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattatt 95  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  53245 ccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 241680 - 241589
Alignment:
Q  24 ggacacgtgtcgtgtccgacac------ggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||      | |||| ||||||||||||||||| ||||||||||||||| |||||||||| | ||||| ||||    
T  241680 ggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgt 241589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 20237 - 20167
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||| |||  |||||  ||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  20237 ccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 20167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 3864 - 3970
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtc-----cgtgtcgtgtctgatgtctgtgtccgtatccgtgct 154  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| || |     ||||     ||||||||||||| |||| |||||| ||||||||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtcgtgtctggtgtccgtgtccatatccgtgct 3963  T
Q  155 tcatagt 161  Q
    |||||||    
T  3964 tcatagt 3970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 51855 - 51806
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 51806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 135302 - 135371
Alignment:
Q  35 gtgtccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtc 104  Q
    ||||| |||||| |||| ||||  |||||||||| ||||||||||||||| ||||||||||| |||||||    
T  135302 gtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtc 135371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 14574 - 14538
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||||||||||||||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattatta 14538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 263366 - 263430
Alignment:
Q  39 ccgacacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgt 103  Q
    |||||||| |||  ||||| ||||||||||||||||||||| |||| ||||||||||| ||||||    
T  263366 ccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgt 263430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 25765 - 25828
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattattaacagtgtca 105  Q
    ||||| |||| ||||| ||||||||||| |||||||||||||| || |||||||||| ||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtca 25828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 21088 - 20985
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcat 158  Q
    ||||||| || || |||||||||||| ||||||||||||| |||||||| |     ||||||||||||||||| |||| |||| |||||| ||| ||||     
T  21088 ataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgtatctgtgtttcac 20989  T
Q  159 agta 162  Q
    ||||    
T  20988 agta 20985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 33378 - 33427
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||| ||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgt 33427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 23832 - 23775
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgatt-ttttcaaattattaac 98  Q
    ||||| |||| |||||  ||||||||||||||||||||||| ||||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaac 23775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 17764 - 17813
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    |||||||||| ||||||||||||||||||||||||||   ||||||||||    
T  17764 taattacactaaattatgtgattttttcaaattattagttgtgtcagcgt 17813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 13476 - 13408
Alignment:
Q  29 cgtgtcgtgtccgacacgg-cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| | |||| || ||  ||||| ||||||||||||||||||| |||||||||||    
T  13476 cgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattatta 13408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 21851 - 21919
Alignment:
Q  29 cgtgtcgtgtccgacacgg-cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| | |||| || ||  ||||| ||||||||||||||||||| |||||||||||    
T  21851 cgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattatta 21919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 44539 - 44587
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaacagtgtcagc 107  Q
    |||||||||||||||||||||||||| ||||||| ||| | ||||||||    
T  44539 ataattacactgaattatgtgattttctcaaatttttagcggtgtcagc 44587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 7319 - 7362
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattatta 7362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 225276 - 225383
Alignment:
Q  53 acactcataattacactgaattatgtgattttttcaaattattaacagtgtcagcgtccgtatgtccgtgtcgtgtctgatgtctgtgtccgtatccgtg 152  Q
    ||||| ||||||||| || ||||||| ||||| ||||||||||| | ||||| ||||     ||||||||||||||| | |||| ||||| || ||||||    
T  225276 acacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtg 225375  T
Q  153 cttcatag 160  Q
     |||||||    
T  225376 tttcatag 225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 9744 - 9798
Alignment:
Q  42 acacggcacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||| |||| ||||  ||||||||||||||||| |||||||| |||||||||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 90888 - 90850
Alignment:
Q  59 ataattacactgaattatgtgattttttcaaattattaa 97  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  90888 ataattacactgaattatatgattttctcaaattattaa 90850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 1076 - 1043
Alignment:
Q  63 ttacactgaattatgtgattttttcaaattatta 96  Q
    |||||||||||||||| |||||||||||||||||    
T  1076 ttacactgaattatgtaattttttcaaattatta 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 19655 - 19584
Alignment:
Q  24 ggacacgtgtcgtgtccgacacggcaccta-cactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||||||||| |||| | || || ||||  |||||||||||||||||||||| ||||||||||||||    
T  19655 ggacacgtgtcgtgtccaacaccg-acataacacttgtaattacactgaattatgtgat-ttttcaaattatta 19584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 9887 - 9842
Alignment:
Q  115 tgtccgtgtcgtgtctgatgtctgtgtccgtatccgtgcttcatag 160  Q
    ||||| ||||||||| | |||| |||||||||||||||||||||||    
T  9887 tgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 178833 - 178870
Alignment:
Q  60 taattacactgaattatg-tgattttttcaaattatta 96  Q
    |||||||||||||||||| |||||||||||||||||||    
T  178833 taattacactgaattatgatgattttttcaaattatta 178870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 192264 - 192313
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||||| ||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgt 192313  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 92851 - 92802
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattattaacagtgtcagcgt 109  Q
    ||||||||||||||||||| ||||| ||||||||||| | ||||| ||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 92802  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 7035 - 7083
Alignment:
Q  48 cacctacactcataattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||  |||||| ||| |||||||| |||||||||||||||||    
T  7035 cacctacacttgtaattatactaaattatgtaattttttcaaattatta 7083  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 8054 - 8018
Alignment:
Q  60 taattacactgaattatgtgattttttcaaattatta 96  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  8054 taattacactgtattatatgattttttcaaattatta 8018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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