View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14871_low_3 (Length: 630)

Name: NF14871_low_3
Description: NF14871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14871_low_3
NF14871_low_3
[»] chr2 (44 HSPs)
chr2 (19-450)||(41656317-41656748)
chr2 (460-597)||(6204506-6204643)
chr2 (393-456)||(4003397-4003461)
chr2 (393-456)||(1364802-1364866)
chr2 (393-456)||(11515013-11515077)
chr2 (393-456)||(37194236-37194300)
chr2 (393-452)||(15555394-15555454)
chr2 (393-456)||(34757574-34757638)
chr2 (461-557)||(39063805-39063901)
chr2 (393-456)||(43190587-43190651)
chr2 (393-452)||(43572592-43572652)
chr2 (393-452)||(3737274-3737333)
chr2 (404-456)||(6656087-6656140)
chr2 (393-457)||(26905772-26905837)
chr2 (393-456)||(13018526-13018590)
chr2 (461-557)||(33361755-33361851)
chr2 (393-452)||(36030786-36030846)
chr2 (460-534)||(16871538-16871612)
chr2 (393-442)||(40211986-40212036)
chr2 (461-534)||(20268028-20268101)
chr2 (461-534)||(20268122-20268195)
chr2 (393-452)||(5322167-5322227)
chr2 (393-456)||(21626092-21626156)
chr2 (392-452)||(26051696-26051756)
chr2 (393-456)||(26599297-26599361)
chr2 (461-557)||(34229047-34229143)
chr2 (424-456)||(35412278-35412310)
chr2 (461-500)||(9375273-9375312)
chr2 (474-557)||(10147799-10147882)
chr2 (474-557)||(10148586-10148669)
chr2 (399-450)||(11949881-11949932)
chr2 (413-456)||(21834910-21834953)
chr2 (393-451)||(41100153-41100212)
chr2 (404-458)||(39181045-39181099)
chr2 (423-456)||(16625860-16625893)
chr2 (393-454)||(28539474-28539535)
chr2 (392-452)||(39750124-39750185)
chr2 (461-550)||(41983245-41983334)
chr2 (461-557)||(4854473-4854569)
chr2 (393-449)||(16813611-16813667)
chr2 (393-449)||(16852890-16852946)
chr2 (393-457)||(30523215-30523279)
chr2 (493-557)||(34173832-34173896)
chr2 (392-452)||(35550205-35550265)
[»] chr7 (28 HSPs)
chr7 (461-623)||(18947286-18947448)
chr7 (461-583)||(18948200-18948322)
chr7 (460-618)||(43702721-43702880)
chr7 (393-458)||(42113007-42113072)
chr7 (393-456)||(6746617-6746681)
chr7 (393-456)||(15748997-15749061)
chr7 (393-452)||(45940448-45940508)
chr7 (460-557)||(41347090-41347187)
chr7 (393-449)||(43741681-43741738)
chr7 (393-456)||(4058187-4058251)
chr7 (393-456)||(23466045-23466109)
chr7 (393-449)||(24924628-24924684)
chr7 (393-456)||(38505382-38505446)
chr7 (396-450)||(10592002-10592056)
chr7 (393-453)||(17884242-17884300)
chr7 (393-456)||(16805615-16805679)
chr7 (461-557)||(25675719-25675815)
chr7 (467-542)||(16980477-16980552)
chr7 (393-444)||(30301972-30302023)
chr7 (393-448)||(42267055-42267110)
chr7 (396-441)||(42253942-42253988)
chr7 (461-531)||(46295646-46295716)
chr7 (393-445)||(13697262-13697315)
chr7 (393-442)||(44858149-44858198)
chr7 (393-449)||(19791667-19791723)
chr7 (393-452)||(33872159-33872219)
chr7 (393-449)||(38233784-38233840)
chr7 (461-497)||(42252829-42252865)
[»] chr5 (24 HSPs)
chr5 (460-630)||(29984724-29984895)
chr5 (393-453)||(35683521-35683582)
chr5 (393-452)||(10843017-10843077)
chr5 (469-557)||(19778734-19778822)
chr5 (393-456)||(39649540-39649604)
chr5 (393-452)||(43496909-43496968)
chr5 (461-571)||(43379443-43379553)
chr5 (393-456)||(2679914-2679978)
chr5 (393-452)||(5772768-5772828)
chr5 (393-458)||(5836854-5836921)
chr5 (393-452)||(22103490-22103548)
chr5 (460-534)||(33529735-33529809)
chr5 (396-456)||(38568418-38568479)
chr5 (461-557)||(3635495-3635591)
chr5 (393-452)||(6491157-6491217)
chr5 (393-456)||(10955738-10955802)
chr5 (394-456)||(15974309-15974372)
chr5 (393-452)||(19389866-19389925)
chr5 (393-444)||(29022600-29022651)
chr5 (393-455)||(3925829-3925891)
chr5 (404-452)||(13569336-13569385)
chr5 (393-457)||(29709491-29709556)
chr5 (393-456)||(10437955-10438019)
chr5 (466-538)||(37839967-37840039)
[»] chr3 (36 HSPs)
chr3 (463-583)||(46461865-46461984)
chr3 (393-458)||(38639556-38639622)
chr3 (460-548)||(34936714-34936802)
chr3 (393-457)||(50948174-50948239)
chr3 (393-452)||(1339946-1340006)
chr3 (393-452)||(33944688-33944748)
chr3 (393-456)||(53664647-53664711)
chr3 (461-560)||(55444550-55444649)
chr3 (399-451)||(517685-517738)
chr3 (399-456)||(30995839-30995896)
chr3 (393-452)||(1132973-1133033)
chr3 (393-456)||(3537177-3537241)
chr3 (393-449)||(29623213-29623269)
chr3 (393-456)||(35283056-35283120)
chr3 (393-456)||(37674188-37674252)
chr3 (393-456)||(40118932-40118996)
chr3 (461-537)||(40613792-40613868)
chr3 (393-451)||(25754150-25754209)
chr3 (398-452)||(27197225-27197279)
chr3 (466-556)||(55439870-55439960)
chr3 (413-450)||(22225341-22225378)
chr3 (461-557)||(20918278-20918374)
chr3 (461-557)||(20927240-20927336)
chr3 (393-452)||(21777684-21777744)
chr3 (393-444)||(24588331-24588383)
chr3 (393-452)||(32858803-32858863)
chr3 (404-458)||(5939840-5939895)
chr3 (413-456)||(33909018-33909061)
chr3 (393-456)||(49183665-49183728)
chr3 (393-444)||(54089502-54089553)
chr3 (393-454)||(45570991-45571053)
chr3 (460-497)||(46462682-46462719)
chr3 (396-452)||(48908925-48908982)
chr3 (461-557)||(37886654-37886750)
chr3 (393-452)||(49855856-49855916)
chr3 (400-456)||(54917740-54917796)
[»] scaffold0031 (1 HSPs)
scaffold0031 (393-458)||(93554-93620)
[»] chr6 (15 HSPs)
chr6 (461-548)||(18065719-18065806)
chr6 (393-456)||(1567250-1567314)
chr6 (393-452)||(32719424-32719484)
chr6 (393-457)||(33590376-33590440)
chr6 (393-456)||(11180207-11180271)
chr6 (393-456)||(20820578-20820642)
chr6 (393-447)||(22788566-22788620)
chr6 (393-458)||(32221970-32222036)
chr6 (393-444)||(4089445-4089496)
chr6 (413-456)||(28551954-28551997)
chr6 (393-456)||(33212301-33212364)
chr6 (460-550)||(3163488-3163578)
chr6 (413-457)||(2502436-2502480)
chr6 (393-444)||(24379618-24379670)
chr6 (393-456)||(26713832-26713896)
[»] chr4 (30 HSPs)
chr4 (460-557)||(39310395-39310492)
chr4 (393-456)||(12708882-12708946)
chr4 (393-456)||(29114281-29114345)
chr4 (393-456)||(30198819-30198883)
chr4 (396-458)||(8828249-8828311)
chr4 (393-458)||(46176975-46177041)
chr4 (466-557)||(24484788-24484879)
chr4 (393-456)||(28175512-28175576)
chr4 (393-456)||(35959165-35959229)
chr4 (393-456)||(38136882-38136946)
chr4 (393-451)||(16318591-16318650)
chr4 (393-456)||(44076573-44076636)
chr4 (413-456)||(52636730-52636773)
chr4 (413-451)||(368043-368081)
chr4 (393-450)||(45823530-45823588)
chr4 (393-453)||(54205811-54205872)
chr4 (393-444)||(516045-516097)
chr4 (461-557)||(31414820-31414916)
chr4 (413-448)||(8827888-8827923)
chr4 (393-451)||(25843818-25843877)
chr4 (461-512)||(29079298-29079349)
chr4 (393-448)||(32866779-32866833)
chr4 (461-531)||(9483662-9483732)
chr4 (393-458)||(21081317-21081383)
chr4 (393-458)||(47063660-47063725)
chr4 (396-444)||(21443004-21443052)
chr4 (413-457)||(27143145-27143189)
chr4 (408-452)||(27485306-27485350)
chr4 (393-456)||(42650605-42650669)
chr4 (393-452)||(50494696-50494756)
[»] chr1 (31 HSPs)
chr1 (393-453)||(52068185-52068246)
chr1 (393-456)||(5584474-5584538)
chr1 (393-456)||(17760523-17760587)
chr1 (393-458)||(69701-69766)
chr1 (393-452)||(29092059-29092119)
chr1 (393-456)||(34154376-34154440)
chr1 (393-456)||(36269712-36269776)
chr1 (393-456)||(37649664-37649728)
chr1 (393-452)||(41817347-41817407)
chr1 (461-534)||(18526899-18526972)
chr1 (393-449)||(46001542-46001599)
chr1 (392-444)||(52073495-52073548)
chr1 (461-529)||(21071279-21071347)
chr1 (393-456)||(27255178-27255242)
chr1 (393-444)||(28848837-28848889)
chr1 (408-456)||(33324603-33324651)
chr1 (393-456)||(32672583-32672646)
chr1 (393-456)||(41432814-41432877)
chr1 (413-448)||(42333622-42333657)
chr1 (413-456)||(50587016-50587059)
chr1 (416-458)||(18909116-18909158)
chr1 (396-450)||(41428045-41428099)
chr1 (461-534)||(15668275-15668348)
chr1 (393-449)||(23412001-23412058)
chr1 (417-458)||(37955142-37955183)
chr1 (393-457)||(50226008-50226073)
chr1 (396-448)||(10449780-10449832)
chr1 (393-456)||(27102872-27102936)
chr1 (393-441)||(33579219-33579267)
chr1 (393-456)||(43036361-43036424)
chr1 (393-457)||(50097596-50097660)
[»] scaffold0136 (1 HSPs)
scaffold0136 (393-452)||(2071-2131)
[»] scaffold0128 (1 HSPs)
scaffold0128 (393-456)||(26348-26412)
[»] chr8 (25 HSPs)
chr8 (393-452)||(23932606-23932666)
chr8 (467-534)||(39309664-39309731)
chr8 (527-593)||(2581193-2581259)
chr8 (460-534)||(39308667-39308741)
chr8 (461-519)||(43235431-43235489)
chr8 (396-452)||(21173909-21173966)
chr8 (413-458)||(43007685-43007730)
chr8 (393-456)||(4166690-4166754)
chr8 (462-517)||(43235993-43236048)
chr8 (406-452)||(13227683-13227729)
chr8 (393-458)||(43438342-43438407)
chr8 (393-456)||(79661-79725)
chr8 (461-557)||(6461880-6461976)
chr8 (393-456)||(26772690-26772754)
chr8 (393-456)||(39193900-39193964)
chr8 (393-456)||(31149882-31149945)
chr8 (424-454)||(13258470-13258500)
chr8 (393-443)||(22330673-22330723)
chr8 (469-498)||(5940760-5940789)
chr8 (408-456)||(4873323-4873371)
chr8 (393-456)||(12506244-12506308)
chr8 (393-444)||(40985122-40985174)
chr8 (461-572)||(41889323-41889435)
chr8 (461-557)||(42578709-42578805)
chr8 (398-450)||(44251611-44251663)
[»] scaffold0051 (4 HSPs)
scaffold0051 (394-455)||(740-801)
scaffold0051 (394-455)||(3617-3678)
scaffold0051 (393-449)||(6805-6862)
scaffold0051 (393-449)||(7788-7845)
[»] scaffold0248 (1 HSPs)
scaffold0248 (393-452)||(244-304)
[»] scaffold0330 (2 HSPs)
scaffold0330 (466-557)||(13214-13305)
scaffold0330 (461-557)||(12517-12613)
[»] scaffold0053 (1 HSPs)
scaffold0053 (393-450)||(29219-29277)
[»] scaffold0263 (1 HSPs)
scaffold0263 (411-456)||(12316-12361)
[»] scaffold0002 (1 HSPs)
scaffold0002 (411-456)||(90942-90987)
[»] scaffold0151 (1 HSPs)
scaffold0151 (506-572)||(20785-20851)
[»] scaffold0388 (1 HSPs)
scaffold0388 (413-458)||(7037-7082)
[»] scaffold0274 (1 HSPs)
scaffold0274 (393-450)||(15893-15950)
[»] scaffold0036 (1 HSPs)
scaffold0036 (393-452)||(82769-82829)
[»] scaffold0024 (1 HSPs)
scaffold0024 (413-441)||(44988-45016)


Alignment Details
Target: chr2 (Bit Score: 412; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 19 - 450
Target Start/End: Original strand, 41656317 - 41656748
Alignment:
Q  19 ctccaaatacctgaccaataccccgggtgccgtaaatgagacgtatcaattaattcctcaatacacagtctatacgcgctacatacagaatatttcccgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41656317 ctccaaatacctgaccaataccccgggtgccgtaaatgagacgtatcaattaattcctcaacacacagtctatacgcgctacatacagaatatttcccgt 41656416  T
Q  119 tcctttccgctttccaaatgaccttatcctgctgtacctgaacaatcagaggcatatttaatatgacagcagcaatgtcatgactaaagatatgcctaat 218  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41656417 tcctttccgctttccaaatgagcttatcctgctgtacctgaacaatcagaggcatatttaatatgacagcagcaatgtcatgactaaagatatgcctaat 41656516  T
Q  219 gagaggttcattccattttttctcattttcctccatcaaactgttgacagcaaaattctgaataagttgtgcgccttcaatatttccatcaatacgccta 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41656517 gagaggttcattccattttttctcattttcctccatcaaactgttgacagcaaaattctgaataagttgtgcgccttcaatatttccatcaatacgccta 41656616  T
Q  319 ccattcaaaagctaaggttcattaaggagtgaaatagaatcacctgtacccatactccatcttgcacccccacgtacaatttttgagttcctccaatgag 418  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41656617 ccattcaaaagctaaggttcattaaggagagaaatagaatcacctgtaccaatactccatcttgcacccccacgtacaatttttgagttcccccaatgag 41656716  T
Q  419 gagagttttgtattatgaagaaaaattaaccc 450  Q
    ||||||||||||||||||||||||||||||||    
T  41656717 gagagttttgtattatgaagaaaaattaaccc 41656748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 460 - 597
Target Start/End: Original strand, 6204506 - 6204643
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattaga 559  Q
    |||| |||||||||||||||||| | ||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||||||  ||||||| |    
T  6204506 cgagagcatctttgctccatttaaggagcctccatttataccaattcacttcacagatgtttaacatgtggcaaatataaaatcaatggcagagattaaa 6204605  T
Q  560 aggcttagaaaaagcatttatttatcggaaaataaaca 597  Q
    ||| ||  ||||| ||||| ||||  ||||||||||||    
T  6204606 aggttttaaaaaatcatttgtttactggaaaataaaca 6204643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 4003461 - 4003397
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  4003461 tacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 4003397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 1364866 - 1364802
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1364866 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 1364802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 11515077 - 11515013
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  11515077 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 11515013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 37194300 - 37194236
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  37194300 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 37194236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 15555394 - 15555454
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  15555394 tacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaaattaaccccc 15555454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 34757638 - 34757574
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||  |||||||||||||    
T  34757638 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaggttaaccccccaaa 34757574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 39063805 - 39063901
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| |||||||||||||||||||   |||| |||||| |  ||||||||||| |||||  |||||||||||||| ||||| ||||||||| |||||    
T  39063805 gagtccatctttgctccatttaggtttcctcaatttattcattttcactttattgatgtatgacatgtggcaaatgtaaaaacaatggttgggatta 39063901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 43190587 - 43190651
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||| ||||    
T  43190587 tacaatttttgatttcctccaaatgatgagagttttgtattatgaagaaaagttaacccctcaaa 43190651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 43572592 - 43572652
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  43572592 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 43572652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 3737274 - 3737333
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||    
T  3737274 tacaatttttgagttcttcaaatgaggatgattttgtattatgaagaaaaattaaccccc 3737333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 6656140 - 6656087
Alignment:
Q  404 agttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  6656140 agttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 6656087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 26905837 - 26905772
Alignment:
Q  393 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    |||||||||| ||||||||| ||||||||| ||||||||| |||||||||| |||||||| |||||    
T  26905837 tacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaacccctcaaaa 26905772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 13018526 - 13018590
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||| ||||| ||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||    
T  13018526 tacatttttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaactccccaaa 13018590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 557
Target Start/End: Complemental strand, 33361851 - 33361755
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    ||||||| ||||||||||||||||| | |||||||||||||| |||| |  || |||||  ||||||||||||| | ||| |||| || ||||||||    
T  33361851 gagtgcaactttgctccatttaggatgactccatttataccagttcagtgcattgatgtatgacatgtggcaaaaacaaacccaaaggatgagatta 33361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 36030846 - 36030786
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||||||||||| |||||||    
T  36030846 tacaatttttgagttcccccaaatgaggagaattttgtattctgaagaaaaatgaaccccc 36030786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 534
Target Start/End: Complemental strand, 16871612 - 16871538
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    ||||| ||||||||||||||||||||||| || |||||| ||||||||  | |||||||   |||||||||||||    
T  16871612 cgagttcatctttgctccatttaggaagcttcaatttatcccatttcaactcatagatgactgacatgtggcaaa 16871538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 40212036 - 40211986
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaa 442  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  40212036 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 40211986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 534
Target Start/End: Complemental strand, 20268101 - 20268028
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    ||||||| ||||||||||||||||| | |||||||||||||| |||| |  || |||||  |||||||||||||    
T  20268101 gagtgcaactttgctccatttaggatgactccatttataccagttcagtgcatcgatgtatgacatgtggcaaa 20268028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 534
Target Start/End: Original strand, 20268122 - 20268195
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    ||||||| ||||||||||||||||| | |||||||||||||| |||| |  || |||||  |||||||||||||    
T  20268122 gagtgcaactttgctccatttaggatgactccatttataccagttcagtgcatcgatgtatgacatgtggcaaa 20268195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 5322167 - 5322227
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||| |||||||||||| |||| |||||||  ||||||||||||||||||||| |||||||    
T  5322167 tacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaatgaaccccc 5322227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 21626156 - 21626092
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||| |||||| |||| ||||||  |||||||||||||||||||| |||||||||||||    
T  21626156 tacaactttttagttcccccaaatgaggatggttttgtattatgaagaaaagttaaccccccaaa 21626092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 26051696 - 26051756
Alignment:
Q  392 gtacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||| ||| |||||| ||| ||||||||||||||||   |||||||||||||||||    
T  26051696 gtacaatttgtgaattcctcaaataaggagagttttgtatttcaaagaaaaattaaccccc 26051756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 26599297 - 26599361
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||| |||||||| |||| ||||||| |  ||||||||||||||||||| |||||||||||    
T  26599297 tacaatttgtgagttcccccaaatgaggagggaattgtattatgaagaaaaatgaaccccccaaa 26599361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 557
Target Start/End: Complemental strand, 34229143 - 34229047
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||||||||||| ||  |||| |||||  |||||| |  | ||||||||  ||||||||| ||| ||||||||||||| ||||||||    
T  34229143 gagtccatctttgctccatttaagattcctcaatttaccccattttaagtcatagatgtgtgacatgtggaaaaaataaaaccaatggctgagatta 34229047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 456
Target Start/End: Original strand, 35412278 - 35412310
Alignment:
Q  424 ttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||||||||||||||||||||||||||    
T  35412278 ttttgtattatgaagaaaaattaaccccccaaa 35412310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 500
Target Start/End: Original strand, 9375273 - 9375312
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttatac 500  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  9375273 gagtgcatctttgctccatttaggagggctccatttatac 9375312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 557
Target Start/End: Original strand, 10147799 - 10147882
Alignment:
Q  474 ctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    ||||| ||||||||||||||||||| |||||||| |   | |||||  ||||||||||||| |||||| |||  ||||||||||    
T  10147799 ctccagttaggaagcctccatttatcccatttcattcgttggatgtgtgacatgtggcaaaaataaaatcaagcgttgagatta 10147882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 557
Target Start/End: Complemental strand, 10148669 - 10148586
Alignment:
Q  474 ctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    ||||||||||||||||||||||||  |||||||| |   | |||||  ||||||||| ||| |||||| ||| |||||||||||    
T  10148669 ctccatttaggaagcctccatttaccccatttcattccttggatgtgtgacatgtggtaaaaataaaatcaagggttgagatta 10148586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 450
Target Start/End: Complemental strand, 11949932 - 11949881
Alignment:
Q  399 ttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    |||| |||||| | |||||| ||||||||||||||||||||||||| |||||    
T  11949932 tttttagttccccaaatgagaagagttttgtattatgaagaaaaataaaccc 11949881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 21834953 - 21834910
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||||||| ||||||||||||||||||| || |||||    
T  21834953 aatgaggagagttttatattatgaagaaaaattaatcctccaaa 21834910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 41100153 - 41100212
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatga-agaaaaattaacccc 451  Q
    |||||||||| |||||| | ||||||||| |||||||||||||| |||||| ||||||||    
T  41100153 tacaattttttagttccccaaatgaggagggttttgtattatgatagaaaagttaacccc 41100212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 39181099 - 39181045
Alignment:
Q  404 agttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||| ||||||||||||||| |||| ||||||||||| | || ||||||||    
T  39181099 agttcctcaaatgaggagagttttatattttgaagaaaaataagcctcccaaaac 39181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 456
Target Start/End: Original strand, 16625860 - 16625893
Alignment:
Q  423 gttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||| ||||||||||||||||||||||||    
T  16625860 gttttgtatcatgaagaaaaattaaccccccaaa 16625893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 454
Target Start/End: Original strand, 28539474 - 28539535
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacccccca 454  Q
    |||||||||| ||| || | |||||||||||||| | ||||||||||||| ||||| |||||    
T  28539474 tacaattttttagtcccccaaatgaggagagtttagcattatgaagaaaagttaactcccca 28539535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 39750185 - 39750124
Alignment:
Q  392 gtacaatttttgagttcctccaatgaggagagttttgtatta-tgaagaaaaattaaccccc 452  Q
    ||||||||||| |||||| | ||||||||| ||||||| ||| ||||||||| |||||||||    
T  39750185 gtacaattttttagttccccaaatgaggagggttttgtgttattgaagaaaagttaaccccc 39750124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 550
Target Start/End: Complemental strand, 41983334 - 41983245
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggtt 550  Q
    ||||||||||||||||||||||  ||| ||| |||||| || |||| ||| | ||||||  |||||||||| || |||||| ||| ||||    
T  41983334 gagtgcatctttgctccatttaccaaggctcaatttatcccttttcccttcacagatgtgtgacatgtggccaaaataaaatcaaaggtt 41983245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 4854473 - 4854569
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||||||||||| |  | |||||||||  || ||||| | |||||||||  ||||| ||| ||| |||||  |||||||||||||||    
T  4854473 gagttcatctttgctccatttatgttgactccatttactccttttcaatgtatagatgtgtgacatatggtaaaaataaattcaatggttgagatta 4854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 16813667 - 16813611
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||||||| ||||  || ||| |||||||||| ||||||||||||||| ||||||    
T  16813667 tacaattttttagtttttcaaataaggagagtttagtattatgaagaaaagttaacc 16813611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 16852946 - 16852890
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||||||| ||||  || ||| |||||||||| ||||||||||||||| ||||||    
T  16852946 tacaattttttagtttttcaaataaggagagtttagtattatgaagaaaagttaacc 16852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 30523279 - 30523215
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    |||||||||| |||||| | ||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  30523279 tacaattttttagttccccaaattagaaggattttgtattatgaagaaaatttaacccaccaaaa 30523215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 493 - 557
Target Start/End: Complemental strand, 34173896 - 34173832
Alignment:
Q  493 atttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||||| || ||||| ||||| |||||  |||||||| ||||| ||||| |||||||||||||||    
T  34173896 atttattccttttcattttattgatgtgtgacatgtgacaaatgtaaaaacaatggttgagatta 34173832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 35550205 - 35550265
Alignment:
Q  392 gtacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||| |||| |||||| | ||||||||| |||| ||||||||||||| | |||||||||    
T  35550205 gtacaactttttagttccccaaatgaggagggtttagtattatgaagaacagttaaccccc 35550265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 8e-75; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 461 - 623
Target Start/End: Original strand, 18947286 - 18947448
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 560  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18947286 gagtgcatctttgctccatttagggagcctccatttataccatttcacttcatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 18947385  T
Q  561 ggcttagaaaaagcatttatttatcggaaaataaacagacgcctctgctcttcctcctatgct 623  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  18947386 ggcttagaaaaagcatttatttaccggaaaataaacacacgcctctgctcttcctcctttgct 18947448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 461 - 583
Target Start/End: Complemental strand, 18948322 - 18948200
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 560  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||| || |||||| ||||||||||||||||||||  ||||| |||||||| ||    
T  18948322 gagtgcatctttgctccatttagggagccttcatttataccatttcacttcatggatgtttgacatgtggcaaatataaaattaatggctgagattaaaa 18948223  T
Q  561 ggcttagaaaaagcatttattta 583  Q
    |||||||||||| ||||| ||||    
T  18948222 ggcttagaaaaaacatttcttta 18948200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 460 - 618
Target Start/End: Original strand, 43702721 - 43702880
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattaga 559  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||||||| |||||||||  | |||||||||| ||||||  ||||  ||||| || |    
T  43702721 cgagtgcatctttgctccatttaaggagcctccatttatacaaattcacttcatagatgtttcatatgtggcaaaaataaaataaatgactgagagtaaa 43702820  T
Q  560 aggcttagaaaaagcatttatttatcggaaaataaacagac-gcctctgctcttcctcct 618  Q
    | | ||||||||| ||||  |||| || |||||||||| ||  |||||||||||||||||    
T  43702821 atgtttagaaaaaacattattttaccgaaaaataaacacacaccctctgctcttcctcct 43702880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 42113007 - 42113072
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    ||||| |||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  42113007 tacaactttttagttccccaaatgaggagagtttagtattatgaagaaaaattaaccccccaaaac 42113072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 6746617 - 6746681
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||    
T  6746617 tacaatttttgagttcccccaaatgaggaaagttttgtattataaagaaaaattaaccccccaaa 6746681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 15748997 - 15749061
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  15748997 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 15749061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 45940448 - 45940508
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  45940448 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 45940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 557
Target Start/End: Original strand, 41347090 - 41347187
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    ||||| |||||||||| ||||||| |||||||||||||| ||  || | ||| |||||||  |||||||||||||||| ||| ||| || ||||||||    
T  41347090 cgagttcatctttgcttcatttagcaagcctccatttatccctgtttattttgtagatgtctgacatgtggcaaatattaaatcaagggctgagatta 41347187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 43741738 - 43741681
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 449  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||| ||||||    
T  43741738 tacaatttttgagttctcccaaatgaggagagttttgtattatgaagaaaagttaacc 43741681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 4058187 - 4058251
Alignment:
Q  393 tacaatttttgagttcctccaat-gaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||| ||||||  |||||| |||||||||||||||||||| |||||||||||||    
T  4058187 tacaattttttagttgctccaaacgaggagggttttgtattatgaagaaaagttaaccccccaaa 4058251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 23466045 - 23466109
Alignment:
Q  393 tacaatttttgagttcc-tccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||| |||||||| || ||||||||| |||||||||||| ||||||||| |||||||||||    
T  23466045 tacaatttgtgagttccctcaaatgaggagggttttgtattataaagaaaaatgaaccccccaaa 23466109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 24924628 - 24924684
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||||||  |||||||| ||||||||| |||||||||||||||||||||| ||||    
T  24924628 tacaattttcaagttcctcaaatgaggagggttttgtattatgaagaaaaatgaacc 24924684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 38505382 - 38505446
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||  |||||| |||| ||||||| |||||||||||||||||||| |||||||||||||    
T  38505382 tacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 38505446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 450
Target Start/End: Original strand, 10592002 - 10592056
Alignment:
Q  396 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    |||||||||||||| | |||||||| | ||||||||||||||||||| |||||||    
T  10592002 aatttttgagttccccaaatgaggatacttttgtattatgaagaaaagttaaccc 10592056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 453
Target Start/End: Original strand, 17884242 - 17884300
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacccccc 453  Q
    |||||||||| |||||||| ||| || ||  ||||||||||||||||||||||||||||||    
T  17884242 tacaattttttagttcctcaaataagaag--ttttgtattatgaagaaaaattaacccccc 17884300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 16805615 - 16805679
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||| ||  |||||||||||||||||||| |||| ||||||||    
T  16805615 tacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaagttaaacccccaaa 16805679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 557
Target Start/End: Complemental strand, 25675815 - 25675719
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||||||||||| |  | |||||||||  || ||||| | |||||||||  ||||||||| ||| |||||  |||||||||||||||    
T  25675815 gagttcatctttgctccatttatgttggctccatttactccttttcaatgtatagatgtgtgacatgtggtaaaaataaattcaatggttgagatta 25675719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 542
Target Start/End: Original strand, 16980477 - 16980552
Alignment:
Q  467 atctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaac 542  Q
    ||||||||||||||||| ||||||| |||||  || |||||||||| ||||||  ||||| || |||| |||||||    
T  16980477 atctttgctccatttagcaagcctcaatttactccttttcactttacagatgtgtgacatctgtcaaaaataaaac 16980552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 30301972 - 30302023
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 444  Q
    |||||||||| |||| ||| ||||||||||||||| |||| |||||||||||    
T  30301972 tacaattttttagtttctcaaatgaggagagttttatattttgaagaaaaat 30302023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 42267055 - 42267110
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaac 448  Q
    |||||||||||| |||  | |||||  |||||||||||||||||||||||||||||    
T  42267055 tacaatttttgaattctccaaatgataagagttttgtattatgaagaaaaattaac 42267110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 441
Target Start/End: Complemental strand, 42253988 - 42253942
Alignment:
Q  396 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaa 441  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  42253988 aattttttagttcctccaaatgaggagggttttgtattatgaagaaa 42253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 531
Target Start/End: Complemental strand, 46295716 - 46295646
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggc 531  Q
    ||||| ||||||||||||||||  ||  |||||||||| || ||||| |||||||||||  ||||||||||    
T  46295716 gagtgaatctttgctccatttatcaatgctccatttatcccttttcattttatagatgtgtgacatgtggc 46295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 13697315 - 13697262
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaatt 445  Q
    ||||| |||| |||||| |||| ||||||| |||||||||||||||||||||||    
T  13697315 tacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaatt 13697262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 44858149 - 44858198
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaa 442  Q
    |||||||||| |||||| ||||||||||| |||| || ||||||||||||    
T  44858149 tacaattttttagttcccccaatgaggagggtttagttttatgaagaaaa 44858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 19791723 - 19791667
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||||||| |||||| | ||||||| | |||| ||||||||||||||| ||||||    
T  19791723 tacaattttttagttccccaaatgaggtgggtttagtattatgaagaaaagttaacc 19791667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 33872159 - 33872219
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||| | |||||| |||| ||||||| |||| ||||||||||||||| |||||||||    
T  33872159 tacaatttgttagttcccccaaatgaggagggtttagtattatgaagaaaagttaaccccc 33872219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 38233784 - 38233840
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 449  Q
    ||||| |||| |||||||| |||||| || |||||||| ||| ||||||||||||||    
T  38233784 tacaactttttagttcctcaaatgagaagggttttgtaatatcaagaaaaattaacc 38233840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 497
Target Start/End: Original strand, 42252829 - 42252865
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccattta 497  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  42252829 gagttcatctttgctccatttatgaagcctccattta 42252865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 8e-35; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 460 - 630
Target Start/End: Complemental strand, 29984895 - 29984724
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattaga 559  Q
    |||||||||||||||| | |||||  ||||||||||||||||| ||||||| || |||||| ||||||||  ||||| ||||||||||| |||||||| |    
T  29984895 cgagtgcatctttgcttcctttagagagcctccatttataccaattcacttcatggatgtttgacatgtgaaaaataaaaaaccaatggctgagattaaa 29984796  T
Q  560 aggcttagaaaaagc-atttatttatcggaaaataaacagacgcctctgctcttcctcctatgctactacac 630  Q
    |||||| ||||||   | || ||||| |||||||||||| ||||||||||||||||||||||| ||| ||||    
T  29984795 aggcttcgaaaaaaatacttgtttattggaaaataaacacacgcctctgctcttcctcctatgatacaacac 29984724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 453
Target Start/End: Original strand, 35683521 - 35683582
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccc 453  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  35683521 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccc 35683582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 10843077 - 10843017
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  10843077 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 10843017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 19778822 - 19778734
Alignment:
Q  469 ctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||| ||||||||| ||||| || ||| ||||||| |||||| |||||||||||||| |||||  || |||||||||||    
T  19778822 ctttcctccatttaagaagcctccgtttattcctttttactttattgatgtttgacatgtggcaaatgtaaaaataagggttgagatta 19778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 39649604 - 39649540
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||    
T  39649604 tacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaa 39649540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 43496909 - 43496968
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| |||||| | |||||| ||||||||||||||| |||||||||||||||||    
T  43496909 tacaatttttaagttccccaaatgagcagagttttgtattattaagaaaaattaaccccc 43496968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 571
Target Start/End: Complemental strand, 43379553 - 43379443
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 560  Q
    |||| ||||||||||||||||| |||| |||||||||| ||||| ||  |  |||||||  ||||||||||||| |||||| ||| ||||| ||||| ||    
T  43379553 gagttcatctttgctccatttatgaaggctccatttatcccattccagctcttagatgtgtgacatgtggcaaaaataaaagcaagggttgggattaaaa 43379454  T
Q  561 ggcttagaaaa 571  Q
    || || |||||    
T  43379453 ggtttggaaaa 43379443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 2679914 - 2679978
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||||||| ||| ||| ||| |||||||||||||||| ||||||| |||||||||||||    
T  2679914 tacaatttttgagtcccttcaaatgatgagagttttgtattataaagaaaagttaaccccccaaa 2679978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 5772768 - 5772828
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| | ||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  5772768 tacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 5772828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 5836921 - 5836854
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaac-cccccaaaac 458  Q
    |||||||||| |||||| |||| |||| ||||||||||||||||||||||||| ||| ||||||||||    
T  5836921 tacaatttttaagttcccccaaatgagaagagttttgtattatgaagaaaaatgaactcccccaaaac 5836854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 22103548 - 22103490
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| |||||| | ||||| ||| ||||||||||||||||||||||||||||||    
T  22103548 tacaattttt-agttccccgaatgatgagggttttgtattatgaagaaaaattaaccccc 22103490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 534
Target Start/End: Original strand, 33529735 - 33529809
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    ||||| ||||||||||||||||||||||| || |||||| ||||||||  | |||||||   |||||||||||||    
T  33529735 cgagttcatctttgctccatttaggaagcttcaatttatcccatttcaactcatagatgactgacatgtggcaaa 33529809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 456
Target Start/End: Original strand, 38568418 - 38568479
Alignment:
Q  396 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||| |||||| |||| ||||||| |||| ||||||||||||||| |||||||||||||    
T  38568418 aattttttagttcccccaaatgaggagggtttagtattatgaagaaaagttaaccccccaaa 38568479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 3635495 - 3635591
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||||||||||| |||| || ||||| | || |||||  | |||||||   |||||||||||||| |||||| || |||||||||||    
T  3635495 gagtccatctttgctccatttaagaagacttcatttttcccttttcatctcatagatgactgacatgtggcaaatttaaaacgaaaggttgagatta 3635591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 6491217 - 6491157
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||||||||||| |||| ||||||   ||||||||||||||||||||| |||||||    
T  6491217 tacaatttttgagttcccccaaatgaggaagattttgtattatgaagaaaaatgaaccccc 6491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 10955738 - 10955802
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||| ||| |||||| |||| ||||||| |||||||||||||| ||||| |||||||||||||    
T  10955738 tacaatcttttagttcccccaaatgaggagggttttgtattatgatgaaaagttaaccccccaaa 10955802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 15974372 - 15974309
Alignment:
Q  394 acaatttttgagttc-ctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||| ||||| ||| |||||||||||| | ||||||||||||||| ||||||| |||||    
T  15974372 acaattttttagttctctcaaatgaggagagtatagtattatgaagaaaagttaaccctccaaa 15974309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 19389866 - 19389925
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| |||||| | |||||||||  |||||||||||||||| |||| |||||||    
T  19389866 tacaattttttagttccccaaatgaggaggattttgtattatgaagataaatgaaccccc 19389925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 29022651 - 29022600
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 444  Q
    |||||||||| |||||||  ||||||||||||||| |||| |||||||||||    
T  29022651 tacaattttttagttccttaaatgaggagagttttatattttgaagaaaaat 29022600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 455
Target Start/End: Original strand, 3925829 - 3925891
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaa 455  Q
    |||||||||| |||||| | |||||||||| || | ||| ||||||||||||||| |||||||    
T  3925829 tacaattttttagttccccaaatgaggagaattctatatcatgaagaaaaattaatcccccaa 3925891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 13569385 - 13569336
Alignment:
Q  404 agttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||||| |||||| | ||||||||||||||||||| |||||||||    
T  13569385 agttcctccaaatgaggaaaattttgtattatgaagaaaagttaaccccc 13569336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 29709556 - 29709491
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    |||||||||| ||||||| ||| |||||||| |||||||||||| |||||| | |||||| |||||    
T  29709556 tacaattttttagttccttcaaatgaggagaattttgtattatggagaaaagtgaacccctcaaaa 29709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 10438019 - 10437955
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||| |||||||| || |||||||  ||||||||||| ||||||| |||||||||||||    
T  10438019 tacaactttttagttcctctaaatgaggaggattttgtattataaagaaaagttaaccccccaaa 10437955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 538
Target Start/End: Original strand, 37839967 - 37840039
Alignment:
Q  466 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatata 538  Q
    ||||||||||||||||| |||  || ||||||| || ||||||||||| || ||  |||||||||||| ||||    
T  37839967 catctttgctccatttaagaacgcttcatttatcccttttcactttattgacgtgtgacatgtggcaagtata 37840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 463 - 583
Target Start/End: Original strand, 46461865 - 46461984
Alignment:
Q  463 gtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaagg 562  Q
    |||||||||||||||||| ||  |||||||||||||||||||||| || || |||||| |||||||||||||||||||| |||||| |||||||| || |    
T  46461865 gtgcatctttgctccattaagagagcctccatttataccatttcatttcatggatgtttgacatgtggcaaatataaaatcaatggctgagatta-aaag 46461963  T
Q  563 cttagaaaaagcatttattta 583  Q
     ||||||||||||||| ||||    
T  46461964 tttagaaaaagcatttgttta 46461984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 38639622 - 38639556
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  38639622 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaaac 38639556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 548
Target Start/End: Original strand, 34936714 - 34936802
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatgg 548  Q
    |||||||||||||||||||||||  |  ||||||||||| || |||||||| |||||| |  ||||||||||||| |||||||||||||    
T  34936714 cgagtgcatctttgctccatttaccatacctccatttatcccttttcacttcatagatttgtgacatgtggcaaaaataaaaccaatgg 34936802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 50948239 - 50948174
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||    
T  50948239 tacaattttttagttcctccaactgaggagggttttgtattatgaagaaaagttaaccctccaaaa 50948174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 1339946 - 1340006
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||    
T  1339946 tacaatttttgagttccttcaaatgatgagagttatgtattatgaagaaaaattaaccccc 1340006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 33944688 - 33944748
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  33944688 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 33944748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 53664647 - 53664711
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||    
T  53664647 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccctcaaa 53664711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 461 - 560
Target Start/End: Complemental strand, 55444649 - 55444550
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaa 560  Q
    |||| |||||||||| |||||| |||  |||||||||| || ||||||||||| |||||  |||||||||||||| ||||| ||| || || ||||||||    
T  55444649 gagtccatctttgcttcatttaagaatgctccatttatcccttttcactttattgatgtgtgacatgtggcaaatgtaaaaacaagggctgggattagaa 55444550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 517685 - 517738
Alignment:
Q  399 ttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 451  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  517685 ttttgagttcccccaaatgaggagggttttgtattatgaagaaaaattaacccc 517738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 456
Target Start/End: Complemental strand, 30995896 - 30995839
Alignment:
Q  399 ttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||| |||||| | |||||| |||||||||||||||||||||||||||||| ||||||    
T  30995896 tttttagttccccaaatgagtagagttttgtattatgaagaaaaattaacctcccaaa 30995839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 1132973 - 1133033
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||||||||||| | || |||||||||||||||||||||||| ||||| |||||||    
T  1132973 tacaatttttgagttccccaaaatgaggagagttttgtattatgaagtaaaatgaaccccc 1133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 3537241 - 3537177
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  3537241 tacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaagttaacctcccaaa 3537177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 29623269 - 29623213
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaacc 449  Q
    ||||| ||||||||| | | ||||||||| |||||||||||||||||||||||||||    
T  29623269 tacaacttttgagtttcccaaatgaggagggttttgtattatgaagaaaaattaacc 29623213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 35283120 - 35283056
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| |||| ||||||| ||||| |||| |||||||||||||||||||||||    
T  35283120 tacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaattaaccccccaaa 35283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 37674188 - 37674252
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||||| || ||||||| ||||||||| |||||||||| |||||||||||||    
T  37674188 tacaattttttagttcctcaaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaa 37674252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 40118932 - 40118996
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| |||| ||||||| ||||||| | ||||||||||||||||||||||||    
T  40118932 tacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaattaaccccccaaa 40118996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 537
Target Start/End: Complemental strand, 40613868 - 40613792
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatat 537  Q
    |||| |||||||||||||||||| |||||||||||||| ||  |||| ||| |||||||  ||||||||||| ||||    
T  40613868 gagttcatctttgctccatttagcaagcctccatttatccctgttcattttgtagatgtctgacatgtggcacatat 40613792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 25754150 - 25754209
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 451  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  25754150 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtcaacccc 25754209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 452
Target Start/End: Complemental strand, 27197279 - 27197225
Alignment:
Q  398 tttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||| |||||||| ||||||||| |||||||||||||||||| | |||||||||    
T  27197279 ttttttagttcctcaaatgaggagggttttgtattatgaagaatagttaaccccc 27197225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 556
Target Start/End: Original strand, 55439870 - 55439960
Alignment:
Q  466 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatt 556  Q
    ||||||||||||||||| |||  || ||||||| || ||||||||||| |||||  ||||| |||||| |||| || ||| ||||||||||    
T  55439870 catctttgctccatttaagaatgcttcatttatcccttttcactttattgatgtgtgacatatggcaagtatacaatcaagggttgagatt 55439960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 450
Target Start/End: Complemental strand, 22225378 - 22225341
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22225378 aatgaggagagtttagtattatgaagaaaaattaaccc 22225341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 20918278 - 20918374
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||| || |||||| |||| |||||||| | || |||||| | |||||||   |||||||||||||| |||||| || |||||||||||    
T  20918278 gagtccatctttacttcatttaagaaggctccatttttcccttttcacctcatagatgactgacatgtggcaaatttaaaacgaagggttgagatta 20918374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 20927240 - 20927336
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||| || |||||| |||| |||||||| | || |||||| | |||||||   |||||||||||||| |||||| || |||||||||||    
T  20927240 gagtccatctttacttcatttaagaaggctccatttttcccttttcacctcatagatgactgacatgtggcaaatttaaaacgaagggttgagatta 20927336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 21777684 - 21777744
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||||| |||  |||| ||| |||||||||||||||||||||||||| |||||||    
T  21777684 tacaatttttgatttctcccaaatgatgagagttttgtattatgaagaaaaatgaaccccc 21777744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 24588331 - 24588383
Alignment:
Q  393 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaat 444  Q
    |||||||||||||||||||| ||||||| |  |||||||||||||||||||||    
T  24588331 tacaatttttgagttcctccaaatgagggggattttgtattatgaagaaaaat 24588383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 32858863 - 32858803
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||||||||||| |||| |||||||  |||| |||||||||||||||| |||||||    
T  32858863 tacaatttttgagttcccccaaatgaggaggattttatattatgaagaaaaatgaaccccc 32858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 5939840 - 5939895
Alignment:
Q  404 agttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    ||||||||||| ||||||   ||||||||||||||||||| |||||||||||||||    
T  5939840 agttcctccaaatgaggaagattttgtattatgaagaaaagttaaccccccaaaac 5939895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 33909018 - 33909061
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||    
T  33909018 aatgaggagggttttgtattatgaagaaaagttaatcccccaaa 33909061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 49183728 - 49183665
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||  | ||||||||| | || ||||||||||||||| |||||||||||||    
T  49183728 tacaattttttagttctccaaatgaggagggattagtattatgaagaaaagttaaccccccaaa 49183665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 54089502 - 54089553
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 444  Q
    |||||||||| |||| ||| |||||| ||||||||||||||| |||||||||    
T  54089502 tacaattttttagtttctcaaatgagaagagttttgtattataaagaaaaat 54089553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 454
Target Start/End: Original strand, 45570991 - 45571053
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccca 454  Q
    |||||||||| |||||| |||| ||||||| ||||  |||||||||||||||| |||||||||    
T  45570991 tacaattttttagttcccccaaatgaggagggtttaatattatgaagaaaaatgaacccccca 45571053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 497
Target Start/End: Complemental strand, 46462719 - 46462682
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccattta 497  Q
    |||||||||||||||||||||||| || ||||||||||    
T  46462719 cgagtgcatctttgctccatttagcaaccctccattta 46462682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 48908925 - 48908982
Alignment:
Q  396 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||| ||||||||||| | | ||| |||||||||||||||||||| |||||||||    
T  48908925 aattttttagttcctccaaattatgagggttttgtattatgaagaaaagttaaccccc 48908982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 37886654 - 37886750
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||| |||||| ||||||||   |||| |||||| || ||||||||||| |||||  |||||||||||||| ||||  ||| ||||| |||||    
T  37886654 gagtccatttttgcttcatttaggtttcctcaatttattccttttcactttattgatgtgtgacatgtggcaaatgtaaagtcaagggttgggatta 37886750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 49855856 - 49855916
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||||||||||||| || |||| |   ||||||||||||||||||||| |||||||    
T  49855856 tacaatttttgagttcctctaaatgagaattattttgtattatgaagaaaaatgaaccccc 49855916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 54917796 - 54917740
Alignment:
Q  400 tttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| | ||| |||||  |||||||||| |||||||||| |||||||||||    
T  54917796 tttgagttccccaaattaggaggattttgtattacgaagaaaaataaaccccccaaa 54917740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 93554 - 93620
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  93554 tacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagttaaccccccaaaac 93620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 461 - 548
Target Start/End: Original strand, 18065719 - 18065806
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatgg 548  Q
    ||||||||||||||||||||||  || ||||||||||| || ||| ||||||||||| |  ||||||||||||| |||||||||||||    
T  18065719 gagtgcatctttgctccatttaccaaacctccatttatccctttttactttatagatatatgacatgtggcaaaaataaaaccaatgg 18065806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 1567314 - 1567250
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1567314 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 1567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 32719424 - 32719484
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  32719424 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 32719484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 457
Target Start/End: Original strand, 33590376 - 33590440
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    |||||||||| || ||| | ||||||||| |||||||||||||||||||| ||||||||||||||    
T  33590376 tacaattttttagctccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaaa 33590440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 11180207 - 11180271
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||| || ||||||||||| ||||||| ||||||||||||| |||||| |||||||||||||    
T  11180207 tacaattctttagttcctccaaatgaggagggttttgtattatggagaaaagttaaccccccaaa 11180271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 20820578 - 20820642
Alignment:
Q  393 tacaatttttgagttcctccaat-gaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| ||||  ||||||||||| ||||||||||||||| |||||||||||||    
T  20820578 tacaattttttagttcccccaaacgaggagagtttagtattatgaagaaaagttaaccccccaaa 20820642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 22788566 - 22788620
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaa 447  Q
    |||||||||| |||||||| |||||| ||||||||||||||| ||||||| ||||    
T  22788566 tacaattttttagttcctcaaatgagaagagttttgtattatcaagaaaagttaa 22788620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 32222036 - 32221970
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||| ||||||||||| ||||||||||||  |||||| ||||||| |||||||| ||||||    
T  32222036 tacaattttttagttcctccaaatgaggagagtttgatattataaagaaaagttaacccctcaaaac 32221970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 4089445 - 4089496
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 444  Q
    |||||||| | |||||||| ||||||||||||||| |||| |||||||||||    
T  4089445 tacaatttcttagttcctcaaatgaggagagttttatattttgaagaaaaat 4089496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 28551954 - 28551997
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||    
T  28551954 aatgaggagagttttgtattatgaagaaaagctaacccctcaaa 28551997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 33212364 - 33212301
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||| |||||| | |||||| ||||| |||||||||||||| ||||||||||| ||||    
T  33212364 tacaactttttagttccccaaatgagcagagtgttgtattatgaagacaaattaacccctcaaa 33212301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 3163488 - 3163578
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggtt 550  Q
    |||||||| |||  ||||||||||  | ||||||||||  || ||||| |||||||||||  |||||||| |||| |||||||||| ||||    
T  3163488 cgagtgcaacttcactccatttagctatcctccatttaccccttttcagtttatagatgtgcgacatgtgtcaaaaataaaaccaagggtt 3163578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 2502436 - 2502480
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    ||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  2502436 aatgaagagagttttatattataaagaaaaataaaccccccaaaa 2502480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 24379670 - 24379618
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 444  Q
    ||||||||||||||| ||| || ||||||| |||||||||| |||||||||||    
T  24379670 tacaatttttgagtttctctaaatgaggagggttttgtattttgaagaaaaat 24379618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 26713896 - 26713832
Alignment:
Q  393 tacaatttttgagttcctccaatgagga-gagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||||||||| | |||||||| || |||  ||| ||||||||||||||||||| ||||    
T  26713896 tacaatttttgagttccccaaatgaggaggattttcttatcatgaagaaaaattaacccctcaaa 26713832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 460 - 557
Target Start/End: Original strand, 39310395 - 39310492
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    ||||| ||||||||||||||||| ||  |||| |||||| ||||||||  ||||||||||  ||||||||| ||| ||||||||||||| ||||||||    
T  39310395 cgagtccatctttgctccatttaagattcctcaatttatcccatttcaagttatagatgtatgacatgtggaaaaaataaaaccaatggctgagatta 39310492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 12708882 - 12708946
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  12708882 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 12708946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 29114281 - 29114345
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  29114281 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 29114345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 30198819 - 30198883
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  30198819 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 30198883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 8828249 - 8828311
Alignment:
Q  396 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | ||| |||||||||    
T  8828249 aatttttcagttcctcaaatgaggagagttttgtattatgaagaaaattaaactccccaaaac 8828311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 46176975 - 46177041
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    ||||| |||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  46176975 tacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaattaaccccccaaaac 46177041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 557
Target Start/End: Original strand, 24484788 - 24484879
Alignment:
Q  466 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    ||||||||||||||||| ||  |||| |||||| | ||||||  ||||||||||  ||||||||| ||| ||||||||||||| ||||||||    
T  24484788 catctttgctccatttaagattcctcaatttatcctatttcaagttatagatgtgtgacatgtggaaaaaataaaaccaatggctgagatta 24484879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 28175512 - 28175576
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| |||||||  ||||||||||||||||||| |||||| ||||||    
T  28175512 tacaattttttagttcctccaaatgaggaggattttgtattatgaagaaaagttaacctcccaaa 28175576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 35959229 - 35959165
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||| |||||| |||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  35959229 tacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaa 35959165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 38136882 - 38136946
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| |||| || ||||||||||||||| |||| |||||||||||||    
T  38136882 tacaattttttagttcctccaaatgagaagggttttgtattatgaaaaaaagttaaccccccaaa 38136946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 451
Target Start/End: Complemental strand, 16318650 - 16318591
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 451  Q
    |||||||||| ||||||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  16318650 tacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaagttaacccc 16318591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 44076636 - 44076573
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||   | |||| |||||||||||||||||||||||||||| ||||||||    
T  44076636 tacaattttttagttccctaagtgagaagagttttgtattatgaagaaaaattaatcccccaaa 44076573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 52636773 - 52636730
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  52636773 aatgaggagggttttatattatgaagaaaaattaaccccccaaa 52636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 368081 - 368043
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaacccc 451  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  368081 aatgaggagggttttgtattatgaagaaaaattaacccc 368043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 45823588 - 45823530
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||||||| |||||||    
T  45823588 tacaatttttaagtttccccaaatgaggagagttttgtattatgaagaaaagttaaccc 45823530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 54205872 - 54205811
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccc 453  Q
    ||||||||||||||||| |||| |||||||  |||||| |||||||||||||| ||||||||    
T  54205872 tacaatttttgagttcccccaaatgaggaggattttgttttatgaagaaaaatgaacccccc 54205811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 516097 - 516045
Alignment:
Q  393 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaat 444  Q
    ||||||||||||||| |||  |||||||||| |||||||||||||||||||||    
T  516097 tacaatttttgagtttctctgaatgaggagaattttgtattatgaagaaaaat 516045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 557
Target Start/End: Complemental strand, 31414916 - 31414820
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||||||||||| |   |||| |||||| || ||||||||||| ||| |  |||||||||||||| |||||  || |||||||||||    
T  31414916 gagtccatctttgctccatttaagtttcctcaatttattccttttcactttattgatatgtgacatgtggcaaatgtaaaaagaagggttgagatta 31414820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 448
Target Start/End: Original strand, 8827888 - 8827923
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaac 448  Q
    |||||||||||||||||||||||||||| |||||||    
T  8827888 aatgaggagagttttgtattatgaagaataattaac 8827923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 451
Target Start/End: Complemental strand, 25843877 - 25843818
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccc 451  Q
    |||| |||||||||| | |||| |||| ||||||||||||||||| ||||||||||||||    
T  25843877 tacactttttgagtttccccaaatgagaagagttttgtattatgatgaaaaattaacccc 25843818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 512
Target Start/End: Complemental strand, 29079349 - 29079298
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcacttta 512  Q
    ||||||||||||||||||||||| ||||||| |||||  || ||||||||||    
T  29079349 gagtgcatctttgctccatttagcaagcctcaatttactccttttcacttta 29079298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 32866779 - 32866833
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaac 448  Q
    |||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||    
T  32866779 tacaattttttagttcc-caaatgaggagaactttgtattatgaagaaaaattaac 32866833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 531
Target Start/End: Complemental strand, 9483732 - 9483662
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggc 531  Q
    |||||||||||||||||||||   |||  ||||||||| || |||||||| ||||||||  ||||||||||    
T  9483732 gagtgcatctttgctccatttgcaaaggttccatttatcccttttcacttcatagatgtgtgacatgtggc 9483662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 21081383 - 21081317
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||| |||| | |||| ||||||| ||||||| |||||||||||||| ||||| |||||||    
T  21081383 tacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaatgaaccctccaaaac 21081317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 47063725 - 47063660
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||| |||||| | ||||||||| ||||| |||| | ||||||||| | |||||||||||    
T  47063725 tacaattttttagttccccaaatgaggagggttttatattttaaagaaaaataagccccccaaaac 47063660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 21443052 - 21443004
Alignment:
Q  396 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaat 444  Q
    ||||||| |||||||| ||||||||| ||||| |||| |||||||||||    
T  21443052 aattttttagttcctcaaatgaggagggttttatattttgaagaaaaat 21443004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 27143189 - 27143145
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    ||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  27143189 aatgaagagagttttatattataaagaaaaataaaccccccaaaa 27143145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 27485306 - 27485350
Alignment:
Q  408 cctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||| |||||||||  ||||||||||||||||||||| |||||||    
T  27485306 cctcaaatgaggaggattttgtattatgaagaaaaatgaaccccc 27485350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 42650669 - 42650605
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| |||| ||||||| ||||| |||| ||||||||||| || ||||||||    
T  42650669 tacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataaaacccccaaa 42650605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 50494696 - 50494756
Alignment:
Q  393 tacaatttttgagtt-cctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| |||| |||  ||||||||| ||||||| |||||||||||| |||||||||    
T  50494696 tacaattttttagtttccttgaatgaggagggttttgtgttatgaagaaaacttaaccccc 50494756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 453
Target Start/End: Original strand, 52068185 - 52068246
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacccccc 453  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  52068185 tacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagttaacccccc 52068246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 5584538 - 5584474
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  5584538 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 5584474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 17760523 - 17760587
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  17760523 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 17760587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 69766 - 69701
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||| |||||||| || |||||| |||| ||||||||||||||| |||||||||||||||    
T  69766 tacaattttttagttcctcaaacgaggagggtttagtattatgaagaaaagttaaccccccaaaac 69701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 29092119 - 29092059
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  29092119 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 29092059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 34154376 - 34154440
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||||||| |||||||||||||    
T  34154376 tacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaagttaaccccccaaa 34154440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 36269776 - 36269712
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| |||||||||||||    
T  36269776 tacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaa 36269712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 37649664 - 37649728
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||| ||||||| ||||| |||||||    
T  37649664 tacaattttttagttcctccaaatgaggagggttttgtattataaagaaaagttaacaccccaaa 37649728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 41817347 - 41817407
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||||| |||||||||    
T  41817347 tacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaaccccc 41817407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 534
Target Start/End: Complemental strand, 18526972 - 18526899
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    |||| ||| ||||||||||||||||||||| ||||||| || |||||| | |||||||   |||||||||||||    
T  18526972 gagtccatatttgctccatttaggaagccttcatttatcccttttcacctcatagatgactgacatgtggcaaa 18526899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 46001599 - 46001542
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||||||| ||||||||||| ||||||| ||||| |||||||||||||| ||||||    
T  46001599 tacaattttttagttcctccaaatgaggagggttttatattatgaagaaaagttaacc 46001542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 52073495 - 52073548
Alignment:
Q  392 gtacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 444  Q
    |||||||||||||||||| |||| ||||||| |||||| |||||||||||||||    
T  52073495 gtacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaat 52073548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 529
Target Start/End: Complemental strand, 21071347 - 21071279
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtg 529  Q
    ||||||||||| ||||||||||| ||  |||||||||| || ||||| |||||||||||  ||||||||    
T  21071347 gagtgcatcttcgctccatttagcaattctccatttatcccttttcattttatagatgtgcgacatgtg 21071279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 27255242 - 27255178
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||| ||||| ||||||| ||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  27255242 tacatttttttagttccttcaaatgaggagggttttgtattatgaagaaaagttaacctcccaaa 27255178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 28848837 - 28848889
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 444  Q
    ||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  28848837 tacaatttttgagttcccccaaatgaggagggttttgtgttatgaagaaaaat 28848889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 33324651 - 33324603
Alignment:
Q  408 cctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||| ||||||||| |||| ||||||||||||||| |||||||||||||    
T  33324651 cctcaaatgaggagggtttagtattatgaagaaaagttaaccccccaaa 33324603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 32672646 - 32672583
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||| ||| || |||||| |||| |||| |||||||||| |||||||||||||    
T  32672646 tacaattttttagtttctcaaacgaggagggtttagtatgatgaagaaaagttaaccccccaaa 32672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 41432814 - 41432877
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||||||| || | ||||||||| ||||| |||||||||||||||| || ||||||||    
T  41432814 tacaaattttgagtcccccaaatgaggagggttttatattatgaagaaaaatgaaacccccaaa 41432877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 448
Target Start/End: Complemental strand, 42333657 - 42333622
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaac 448  Q
    ||||||||| ||||||||||||||||||||||||||    
T  42333657 aatgaggagggttttgtattatgaagaaaaattaac 42333622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 50587059 - 50587016
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||  ||||||||||||||||||||| |||||||||||    
T  50587059 aatgaggaggattttgtattatgaagaaaaatgaaccccccaaa 50587016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 18909116 - 18909158
Alignment:
Q  416 gaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  18909116 gaggagagttttgtattatgaaaaaaaattaaccttccaaaac 18909158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 450
Target Start/End: Original strand, 41428045 - 41428099
Alignment:
Q  396 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    |||||||||||||| | |||||||||| | ||  |||||||||||||||||||||    
T  41428045 aatttttgagttccccaaatgaggagattctttcattatgaagaaaaattaaccc 41428099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 534
Target Start/End: Complemental strand, 15668348 - 15668275
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    |||| ||||||||||||||||| |||| |||||||||  || ||||||| | | |||||  |||||||||||||    
T  15668348 gagtccatctttgctccatttaagaaggctccatttactccttttcactgtttggatgtgtgacatgtggcaaa 15668275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 23412001 - 23412058
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||||||| ||||||||||| |||||||  ||||| ||||||||||||||| ||||    
T  23412001 tacaattttttagttcctccaaatgaggaggattttgaattatgaagaaaaatgaacc 23412058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 458
Target Start/End: Complemental strand, 37955183 - 37955142
Alignment:
Q  417 aggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||| ||||||||||||||||||||||||| | |||||||    
T  37955183 aggagaattttgtattatgaagaaaaattaacactccaaaac 37955142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 50226073 - 50226008
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    |||||||||| ||||| ||||| |||| || ||||  |||||||||||||| ||||||||||||||    
T  50226073 tacaattttttagttcttccaaatgagaagggtttaatattatgaagaaaagttaaccccccaaaa 50226008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 10449832 - 10449780
Alignment:
Q  396 aatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaac 448  Q
    ||||||||||||   | ||||| |||||||||||||||||||||||| |||||    
T  10449832 aatttttgagttttccaaatgaagagagttttgtattatgaagaaaagttaac 10449780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 27102872 - 27102936
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||||||| | |||| ||| |||  ||||||||||||||||||||| |||| ||||||    
T  27102872 tacaatttttgagtttccccaaatgaagagcattttgtattatgaagaaaaatgaacctcccaaa 27102936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 33579267 - 33579219
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaa 441  Q
    ||||| ||||||||||| | ||||||||| |||||||||||| ||||||    
T  33579267 tacaacttttgagttccccaaatgaggagggttttgtattataaagaaa 33579219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 43036361 - 43036424
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||  |||| ||||||| ||||| |||| |||||||||||||||||||||||    
T  43036361 tacaattttttagttctcccaaatgaggagggttttatatt-tgaagaaaaattaaccccccaaa 43036424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 50097660 - 50097596
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaa 457  Q
    ||||| |||| |||||||| ||| ||||  ||||| |||| ||||||||||| ||||||||||||    
T  50097660 tacaactttttagttcctcaaataaggatggttttatattttgaagaaaaataaaccccccaaaa 50097596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 2071 - 2131
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  2071 tacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 26412 - 26348
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  26412 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttatccccccaaa 26348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 23932606 - 23932666
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  23932606 tacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 23932666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 534
Target Start/End: Complemental strand, 39309731 - 39309664
Alignment:
Q  467 atctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    |||||||||||||||||||| ||||||||||| || |||||| | ||||||| | |||||||||||||    
T  39309731 atctttgctccatttaggaaacctccatttatcccttttcacctcatagatgattgacatgtggcaaa 39309664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 593
Target Start/End: Original strand, 2581193 - 2581259
Alignment:
Q  527 gtggcaaatataaaaccaatggttgagattagaaggcttagaaaaagcatttatttatcggaaaata 593  Q
    ||||||||||| ||||||||||||||||||| || ||||| ||||||||||| ||||  ||||||||    
T  2581193 gtggcaaatatgaaaccaatggttgagattaaaaagcttaaaaaaagcatttgtttactggaaaata 2581259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 534
Target Start/End: Original strand, 39308667 - 39308741
Alignment:
Q  460 cgagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaa 534  Q
    ||||| ||||||||||||||||||||| ||||||||||| || |||||| | |||||||   |||||||||||||    
T  39308667 cgagtccatctttgctccatttaggaaacctccatttatcccttttcacctcatagatgactgacatgtggcaaa 39308741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 519
Target Start/End: Original strand, 43235431 - 43235489
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgt 519  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||| ||||||||    
T  43235431 gagtgcatctttgctccatttaccaagcctccatttatcccttttcacttcatagatgt 43235489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 21173909 - 21173966
Alignment:
Q  396 aatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  21173909 aattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccc 21173966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 43007730 - 43007685
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  43007730 aatgaggagagttttgtattataaagaaaagttaaccccccaaaac 43007685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 4166690 - 4166754
Alignment:
Q  393 tacaatttttgagttcctcc-aatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||| ||||||| | |||||| |||||||||||||||||||||||||| ||||||||||    
T  4166690 tacaactttttagttccttcgaatgagaagagttttgtattatgaagaaaaatttaccccccaaa 4166754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 43236048 - 43235993
Alignment:
Q  462 agtgcatctttgctccatttaggaagcctccatttataccatttcactttatagat 517  Q
    |||||||||||||||||||||  ||||||||||||||  | |||||||||||||||    
T  43236048 agtgcatctttgctccatttaccaagcctccatttatctcttttcactttatagat 43235993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 452
Target Start/End: Complemental strand, 13227729 - 13227683
Alignment:
Q  406 ttcctccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||    
T  13227729 ttcctcaaatgaggagagttttgtataatgaagaaaagttaaccccc 13227683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 43438342 - 43438407
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    ||||||||||||||||||| |||| | ||| ||||||||||| ||||||||| |||| || |||||    
T  43438342 tacaatttttgagttcctcaaatgggaagaattttgtattataaagaaaaatgaacctccaaaaac 43438407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 79661 - 79725
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| |||| ||||||| |||| |||||||||||||||  ||||||||||||    
T  79661 tacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaacgtaaccccccaaa 79725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 6461880 - 6461976
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| |||||||||||||||| ||    ||| ||||||  |||||||  ||||||||||  ||||||||||||| |||||| ||||||||| |||||    
T  6461880 gagttcatctttgctccatttcggtttgctcaatttatttcatttcaagttatagatgtatgacatgtggcaaaaataaaatcaatggttgtgatta 6461976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 26772690 - 26772754
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| ||||||| ||| ||| ||| |||||||||||||||||||| |||||| ||||||    
T  26772690 tacaattttttagttccttcaaatgatgagggttttgtattatgaagaaaagttaacctcccaaa 26772754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 39193964 - 39193900
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||| |||||| |||| ||| ||| ||||| ||||||||||||||||||||||||||||    
T  39193964 tacaactttttagttcccccaaatgaagagggttttatattatgaagaaaaattaaccccccaaa 39193900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 31149945 - 31149882
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||| |||| |||||| | ||||||||   |||||||||| ||||||||||||||||||||||    
T  31149945 tacaactttttagttccccaaatgaggatgattttgtattaggaagaaaaattaaccccccaaa 31149882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 454
Target Start/End: Complemental strand, 13258500 - 13258470
Alignment:
Q  424 ttttgtattatgaagaaaaattaacccccca 454  Q
    |||||||||||||||||||||||||||||||    
T  13258500 ttttgtattatgaagaaaaattaacccccca 13258470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 22330723 - 22330673
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaa 443  Q
    |||||||||| |||||||  || ||||||| ||||||||||||||||||||    
T  22330723 tacaattttttagttcctaaaaagaggagaattttgtattatgaagaaaaa 22330673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 498
Target Start/End: Complemental strand, 5940789 - 5940760
Alignment:
Q  469 ctttgctccatttaggaagcctccatttat 498  Q
    ||||||||||||||||||||||||||||||    
T  5940789 ctttgctccatttaggaagcctccatttat 5940760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 4873323 - 4873371
Alignment:
Q  408 cctccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||| ||||||||| ||||  |||||||||||||| |||||||||||||    
T  4873323 cctcaaatgaggagggtttcatattatgaagaaaagttaaccccccaaa 4873371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 12506244 - 12506308
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    |||||||||| |||||| |||| ||||||| ||||  |||| ||||||||| |||||||||||||    
T  12506244 tacaattttttagttcccccaaatgaggagggtttaatattttgaagaaaagttaaccccccaaa 12506308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 40985122 - 40985174
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaat 444  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||| ||||||    
T  40985122 tacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaat 40985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 572
Target Start/End: Original strand, 41889323 - 41889435
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatat-aaaaccaatggttgagattaga 559  Q
    |||| |||||||| |||||||| |||| |||||||||  || ||||||| | | |||||  ||||||||||||| || |||| ||| || |||||||| |    
T  41889323 gagtccatctttgttccatttaagaaggctccatttactccttttcactgtttggatgtgtgacatgtggcaaaaatgaaaatcaagggctgagattaaa 41889422  T
Q  560 aggcttagaaaaa 572  Q
    ||| || ||||||    
T  41889423 agggttggaaaaa 41889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 42578709 - 42578805
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||||||||||| |    ||| |||||  ||||||||  | ||||||||  ||||||||||||| |||||| |||||| ||||||||    
T  42578709 gagtccatctttgctccatttatgtttgctcaatttaccccatttcaagtcatagatgtatgacatgtggcaaaaataaaatcaatggctgagatta 42578805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 44251611 - 44251663
Alignment:
Q  398 tttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    ||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||    
T  44251611 ttttttagttcctcaaatgagaagaatttagtattatgaagaaaagttaaccc 44251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 740 - 801
Alignment:
Q  394 acaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaa 455  Q
    ||||| ||| |||||||| ||||||||| |||||||||||||||||||| ||||||| ||||    
T  740 acaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 3617 - 3678
Alignment:
Q  394 acaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccccccaa 455  Q
    ||||| ||| |||||||| ||||||||| |||||||||||||||||||| ||||||| ||||    
T  3617 acaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 6805 - 6862
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||| ||| ||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  6805 tacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacc 6862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 7788 - 7845
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaacc 449  Q
    |||||| ||| ||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  7788 tacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacc 7845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 244 - 304
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    |||||||||| ||||||||||| | ||||| |||||||||||||||||||| |||||||||    
T  244 tacaattttttagttcctccaaataaggagggttttgtattatgaagaaaagttaaccccc 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 466 - 557
Target Start/End: Complemental strand, 13305 - 13214
Alignment:
Q  466 catctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||||||||||||||||||   |||| |||||| || ||||||||||| |||||  |||||||||||||| ||||  ||| ||||| |||||    
T  13305 catctttgctccatttaggtttcctcaatttattccttttcactttattgatgtgtgacatgtggcaaatttaaagtcaagggttgggatta 13214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 557
Target Start/End: Original strand, 12517 - 12613
Alignment:
Q  461 gagtgcatctttgctccatttaggaagcctccatttataccatttcactttatagatgttggacatgtggcaaatataaaaccaatggttgagatta 557  Q
    |||| ||||||||||| ||||| |   |||| |||||| || ||||||||||| | |||  |||||||||||||| ||||| ||| ||||| |||||    
T  12517 gagttcatctttgctctatttaagtttcctcaatttattccttttcactttattgttgtgtgacatgtggcaaatgtaaaaacaagggttgggatta 12613  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 29277 - 29219
Alignment:
Q  393 tacaatttttgagttcctccaa-tgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||||| |||||||    
T  29277 tacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaaccc 29219  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 12316 - 12361
Alignment:
Q  411 ccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||    
T  12316 ccaatgaggagggttttgtaatatgaagaaaagttaaccccccaaa 12361  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 90942 - 90987
Alignment:
Q  411 ccaatgaggagagttttgtattatgaagaaaaattaaccccccaaa 456  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||    
T  90942 ccaatgaggagggttttgtaatatgaagaaaagttaaccccccaaa 90987  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 572
Target Start/End: Original strand, 20785 - 20851
Alignment:
Q  506 cactttatagatgttggacatgtggcaaatataaaaccaatggttgagattagaaggcttagaaaaa 572  Q
    |||||| |||||||  ||||||||| ||| ||||||||||||| |||||||| |||| || ||||||    
T  20785 cactttctagatgtgtgacatgtggtaaaaataaaaccaatggctgagattaaaaggtttggaaaaa 20851  T

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Target: scaffold0388 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 7082 - 7037
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaaaattaaccccccaaaac 458  Q
    ||||||||| |||||||||||||||||||| | |||| ||||||||    
T  7082 aatgaggagggttttgtattatgaagaaaagtaaacctcccaaaac 7037  T

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Target: scaffold0274 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 15950 - 15893
Alignment:
Q  393 tacaatttttgagttcctccaatgaggagagttttgtattatgaagaaaaattaaccc 450  Q
    |||||||||| | |||| | |||||||||| ||||  |||||||||||||||||||||    
T  15950 tacaatttttaaattccccaaatgaggagattttttcattatgaagaaaaattaaccc 15893  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 82829 - 82769
Alignment:
Q  393 tacaatttttgagttcc-tccaatgaggagagttttgtattatgaagaaaaattaaccccc 452  Q
    ||||||||| ||||||| || ||| |||||  ||||||||||||||||||||| |||||||    
T  82829 tacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaataaaccccc 82769  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 441
Target Start/End: Original strand, 44988 - 45016
Alignment:
Q  413 aatgaggagagttttgtattatgaagaaa 441  Q
    |||||||||||||||||||||||||||||    
T  44988 aatgaggagagttttgtattatgaagaaa 45016  T

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